>ref|XM_566478.1| Cryptococcus neoformans var. neoformans JEC21 citrate synthase
          (CNA00510) partial mRNA
          Length = 1611

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  aggtcccagtttcgtccctccctc 24
          ||||||||||| ||||||||||||
Sbjct: 72 aggtcccagttgcgtccctccctc 95

>emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chromosome X, complete
             sequence
          Length = 189900

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     tcccagtttcgtccctccctcccc 27
             |||||||||| |||||||||||||
Sbjct: 88844 tcccagtttcctccctccctcccc 88867

>emb|AL672303.5| Mouse DNA sequence from clone RP23-461A6 on chromosome X, complete
             sequence
          Length = 200875

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 4     tcccagtttcgtccctccctccc 26
             |||||||||| ||||||||||||
Sbjct: 28536 tcccagtttcttccctccctccc 28514

>ref|XM_510226.1| PREDICTED: Pan troglodytes similar to Forkhead box protein G1B
            (Forkhead-related protein FKHL1) (Transcription factor
            BF-1) (Brain factor 1) (BF1) (LOC453234), mRNA
          Length = 3057

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 17   cctccctccccccgaggc 34
            ||||||||||||||||||
Sbjct: 1277 cctccctccccccgaggc 1294

>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
             sequence
          Length = 1194300

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 12    tcgtccctccctcccccc 29
             ||||||||||||||||||
Sbjct: 82809 tcgtccctccctcccccc 82826

>gb|AC104553.7| Mus musculus chromosome 15, clone RP24-160M22, complete sequence
          Length = 155191

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 12    tcgtccctccctcccccc 29
             ||||||||||||||||||
Sbjct: 64883 tcgtccctccctcccccc 64900

>gb|AC157897.2| Mus musculus chromosome 15, clone RP23-442E13, complete sequence
          Length = 186421

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 4      tcccagtttcgtccctccctcc 25
              |||||||||| |||||||||||
Sbjct: 115027 tcccagtttcctccctccctcc 115048

>ref|XM_572520.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNH03560) partial mRNA
          Length = 2659

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 12   tcgtccctccctcccccc 29
            ||||||||||||||||||
Sbjct: 2471 tcgtccctccctcccccc 2488

>gb|AC073574.11| Homo sapiens 12 BAC RP11-393J8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181287

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 11     ttcgtccctccctccccc 28
              ||||||||||||||||||
Sbjct: 147242 ttcgtccctccctccccc 147259

>emb|AL160410.24| Human DNA sequence from clone RP11-136B8 on chromosome 20 Contains ESs,
             STSs and GSSs, complete sequence
          Length = 63090

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 11    ttcgtccctccctccccc 28
             ||||||||||||||||||
Sbjct: 42307 ttcgtccctccctccccc 42324

>emb|AL160151.16| Human DNA sequence from clone RP11-168G22 on chromosome 13 Contains a
             ribosomal protein L32 (RPL32) pseudogene, the 3' end of a
             novel gene and two novel genes, complete sequence
          Length = 154530

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 4     tcccagtttcgtccctccctcc 25
             |||||||||| |||||||||||
Sbjct: 98354 tcccagtttcttccctccctcc 98333

>gb|AC018709.9| Homo sapiens BAC clone RP11-215A19 from 4, complete sequence
          Length = 161013

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 12     tcgtccctccctcccccc 29
              ||||||||||||||||||
Sbjct: 118314 tcgtccctccctcccccc 118331

>gb|AC132147.4| Mus musculus BAC clone RP23-2F11 from 8, complete sequence
          Length = 237167

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 12    tcgtccctccctcccccc 29
             ||||||||||||||||||
Sbjct: 90617 tcgtccctccctcccccc 90600

>gb|AC162305.5| Mus musculus BAC clone RP23-470G3 from chromosome 16, complete sequence
          Length = 208504

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 14    gtccctccctccccccga 31
             ||||||||||||||||||
Sbjct: 92484 gtccctccctccccccga 92501

>emb|AL732633.6| Mouse DNA sequence from clone RP23-320E20 on chromosome 11, complete
             sequence
          Length = 99697

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 13    cgtccctccctccccccgaggc 34
             |||||||||||||| |||||||
Sbjct: 39680 cgtccctccctccctccgaggc 39701


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 639,033
Number of Sequences: 3902068
Number of extensions: 639033
Number of successful extensions: 366132
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 365954
Number of HSP's gapped (non-prelim): 178
length of query: 34
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 14
effective length of database: 17,155,003,908
effective search space: 240170054712
effective search space used: 240170054712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)