ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast40f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6 180 1e-45
2RS6B_ARATH (P51430) 40S ribosomal protein S6-2 178 6e-45
3RS6A_ARATH (O48549) 40S ribosomal protein S6-1 178 6e-45
4RS6_RAT (P62755) 40S ribosomal protein S6 132 4e-31
5RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33) 132 4e-31
6RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33) 132 4e-31
7RS6_ICTPU (Q90YR8) 40S ribosomal protein S6 129 3e-30
8RS6_CHICK (P47838) 40S ribosomal protein S6 129 4e-30
9RS6_XENLA (P39017) 40S ribosomal protein S6 127 1e-29
10RS6_BRAFL (O01727) 40S ribosomal protein S6 126 2e-29
11RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6 126 3e-29
12RS6_APLCA (Q9BMX5) 40S ribosomal protein S6 126 3e-29
13RS6_AEDAE (Q9U761) 40S ribosomal protein S6 121 7e-28
14RS6_AEDAL (Q9U762) 40S ribosomal protein S6 121 7e-28
15RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6 119 5e-27
16RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10) 118 6e-27
17RS6_CANGA (Q6FJH3) 40S ribosomal protein S6 118 6e-27
18RS6_MANSE (Q94624) 40S ribosomal protein S6 118 8e-27
19RS6_YARLI (Q6C169) 40S ribosomal protein S6 118 8e-27
20RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6 118 8e-27
21RS6_DROME (P29327) 40S ribosomal protein S6 117 2e-26
22RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B 117 2e-26
23RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6 117 2e-26
24RS6A_SCHPO (P05752) 40S ribosomal protein S6-A 116 2e-26
25RS6_SPOFR (Q95V32) 40S ribosomal protein S6 116 3e-26
26RS6_KLULA (Q6CM04) 40S ribosomal protein S6 114 1e-25
27RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9) 112 3e-25
28RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment) 100 2e-21
29RS6_LEIMA (Q9NE83) 40S ribosomal protein S6 92 5e-19
30RS6_LEIIN (O44012) 40S ribosomal protein S6 90 3e-18
31RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6 67 3e-11
32RS6E_PYRAB (Q9UYS3) 30S ribosomal protein S6e 52 7e-07
33RS6E_PYRKO (Q5JDK8) 30S ribosomal protein S6e 51 2e-06
34RS6E_PYRFU (Q8U3H8) 30S ribosomal protein S6e 50 3e-06
35RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e 48 1e-05
36RS6E_PYRHO (O58349) 30S ribosomal protein S6e 46 4e-05
37RS6E_METJA (P54067) 30S ribosomal protein S6e 46 5e-05
38RS6E_METTH (O26360) 30S ribosomal protein S6e 43 4e-04
39RS6E_PICTO (Q6L1H6) 30S ribosomal protein S6e 42 0.001
40RS6E_THEAC (Q9HLA6) 30S ribosomal protein S6e 40 0.002
41RS6E_NANEQ (Q74MJ5) 30S ribosomal protein S6e 39 0.006
42RS6E_HALSA (Q9HMJ5) 30S ribosomal protein S6e 37 0.023
43RS6E_METAC (Q8TQL4) 30S ribosomal protein S6e 37 0.023
44RS6E_ARCFU (O29739) 30S ribosomal protein S6e 36 0.052
45RS6E_METMA (Q8PU79) 30S ribosomal protein S6e 35 0.067
46RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e 35 0.11
47RS6E_SULTO (Q975N7) 30S ribosomal protein S6e 34 0.15
48RS6E_SULSO (Q980A6) 30S ribosomal protein S6e 31 1.3
49RS6E_HALMA (P21509) 30S ribosomal protein S6e (HS13) 30 2.8
50Y1923_STRMU (Q8DS88) UPF0168 protein SMU.1923c 30 3.7
51WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC... 29 4.8
52RNC_PSEF5 (Q4KHT1) Ribonuclease III (EC 3.1.26.3) (RNase III) 29 4.8
53NRAM_IARI5 (P03484) Neuraminidase (EC 3.2.1.18) 29 6.3
54ILVD_THET8 (Q5SIY0) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD) 29 6.3
55NRAM_IACKR (P09574) Neuraminidase (EC 3.2.1.18) 28 8.2
56HYAL1_PIG (Q6RHW4) Hyaluronidase-1 precursor (EC 3.2.1.35) (Hyal... 28 8.2
57ILVD_THET2 (Q72JA8) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD) 28 8.2
58SP8_HUMAN (Q8IXZ3) Transcription factor Sp8 (Specificity protein 8) 28 8.2
59STRN4_MOUSE (P58404) Striatin-4 (Zinedin) 28 8.2 
>RS6_ASPOF (Q9M3V8) 40S ribosomal protein S6|
          Length = 251

 Score =  180 bits (457), Expect = 1e-45
 Identities = 89/118 (75%), Positives = 93/118 (78%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MK NIANPTTGCQKK+EIDDDQKLR  YDKRISQEV GD LGEEFKGY+F IMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT GRVRLLLHRGTPCF                 CIVS DLSV+NLVIVK+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKK 118
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>RS6B_ARATH (P51430) 40S ribosomal protein S6-2|
          Length = 249

 Score =  178 bits (451), Expect = 6e-45
 Identities = 86/118 (72%), Positives = 93/118 (78%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MK N+ANPTTGCQKK+EIDDDQKLR  +DKR+SQEV GD LGEEFKGY+F IMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT GRVRLLLHRGTPCF                 CIVS DLSV+NLVIVK+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKK 118
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>RS6A_ARATH (O48549) 40S ribosomal protein S6-1|
          Length = 250

 Score =  178 bits (451), Expect = 6e-45
 Identities = 87/118 (73%), Positives = 92/118 (77%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MK N+ANPTTGCQKK+EIDDDQKLR  YDKRISQEV GD LGEEFKGY+F I GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT GRVRLLLHRGTPCF                 CIVS DLSV+NLVIVK+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKK 118
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>RS6_RAT (P62755) 40S ribosomal protein S6|
          Length = 249

 Score =  132 bits (332), Expect = 4e-31
 Identities = 67/118 (56%), Positives = 82/118 (69%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LGEE+KGY+  I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSV+NLVIVK+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKK 116
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>RS6_MOUSE (P62754) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  132 bits (332), Expect = 4e-31
 Identities = 67/118 (56%), Positives = 82/118 (69%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LGEE+KGY+  I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSV+NLVIVK+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKK 116
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>RS6_HUMAN (P62753) 40S ribosomal protein S6 (Phosphoprotein NP33)|
          Length = 249

 Score =  132 bits (332), Expect = 4e-31
 Identities = 67/118 (56%), Positives = 82/118 (69%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LGEE+KGY+  I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSV+NLVIVK+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKK 116
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>RS6_ICTPU (Q90YR8) 40S ribosomal protein S6|
          Length = 249

 Score =  129 bits (325), Expect = 3e-30
 Identities = 64/118 (54%), Positives = 83/118 (70%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LG+E+KGY+  I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT+GRVRLLL +G  C+                 CIV  +LSV+NLVI+++
Sbjct: 61  FPMKQGVLTNGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIIRK 116
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>RS6_CHICK (P47838) 40S ribosomal protein S6|
          Length = 249

 Score =  129 bits (323), Expect = 4e-30
 Identities = 65/118 (55%), Positives = 81/118 (68%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P TGCQK +E+DD++ +R  Y+KR++ EV  D LGEE+KGY+  I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERNVRTFYEKRMATEVAADSLGEEWKGYVVRISGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSV+NLVIVK+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKK 116
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>RS6_XENLA (P39017) 40S ribosomal protein S6|
          Length = 249

 Score =  127 bits (320), Expect = 1e-29
 Identities = 64/118 (54%), Positives = 82/118 (69%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P TGCQK +E++D++KLR  Y+KR++ EV  D LG+E+KGY+  I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVEDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSV+NLVIV++
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVRK 116
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>RS6_BRAFL (O01727) 40S ribosomal protein S6|
          Length = 244

 Score =  126 bits (317), Expect = 2e-29
 Identities = 62/118 (52%), Positives = 83/118 (70%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MK+NI+ P TGCQK +E+DD++KLR  Y+KR+S ++  + LG+E+KGY+  I GG DKQG
Sbjct: 1   MKINISYPATGCQKLIEVDDERKLRPFYEKRMSHQMTAESLGDEWKGYLVRISGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT+GRVRLLL +G  C+                 CIV  +LSV+NLVI+K+
Sbjct: 61  FPMKQGVLTNGRVRLLLGKGHSCY--RPRRTGERKRKSVRGCIVDSNLSVLNLVILKK 116
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>RS6_ONCMY (Q9YGF2) 40S ribosomal protein S6|
          Length = 249

 Score =  126 bits (316), Expect = 3e-29
 Identities = 64/118 (54%), Positives = 81/118 (68%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P TGCQK +E+DD++KLR  Y+KR++ EV  D LG+E+KGY+  I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYMVRISGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT GRVRLLL +G  C+                 CI   +LSV+NLVI+K+
Sbjct: 61  FPMKQGVLTHGRVRLLLAKGHSCY--RPRRTGERKRKSVRGCIGDANLSVLNLVIIKK 116
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>RS6_APLCA (Q9BMX5) 40S ribosomal protein S6|
          Length = 247

 Score =  126 bits (316), Expect = 3e-29
 Identities = 64/118 (54%), Positives = 81/118 (68%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P TGCQK +E+DD++KLR  YDKRIS E+  D LG+E+KGY+  I GG DKQG
Sbjct: 1   MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT+ RVRLLL +   C+                 CIV  +LSV++LVI+K+
Sbjct: 61  FPMKQGVLTATRVRLLLDKNHSCY--RPRRTGERKRKSVRGCIVDSNLSVLSLVIIKK 116
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>RS6_AEDAE (Q9U761) 40S ribosomal protein S6|
          Length = 346

 Score =  121 bits (304), Expect = 7e-28
 Identities = 61/118 (51%), Positives = 78/118 (66%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLN++ P TG QK  E+ DD KLR+ YDKR+  E+  D LG+E+KGY+F I GG DKQG
Sbjct: 1   MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT+ RVRLLL +G  C+                 CIV Q+LS + L++VK+
Sbjct: 61  FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKK 116
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>RS6_AEDAL (Q9U762) 40S ribosomal protein S6|
          Length = 349

 Score =  121 bits (304), Expect = 7e-28
 Identities = 61/118 (51%), Positives = 78/118 (66%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLN++ P TG QK  E+ DD KLR+ YDKR+  E+  D LG+E+KGY+F I GG DKQG
Sbjct: 1   MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT+ RVRLLL +G  C+                 CIV Q+LS + L++VK+
Sbjct: 61  FPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKK 116
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>RS6_CAEEL (Q9NEN6) 40S ribosomal protein S6|
          Length = 246

 Score =  119 bits (297), Expect = 5e-27
 Identities = 60/118 (50%), Positives = 80/118 (67%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           M+LN A P TG QK  E+D+++KLR  ++KR+SQEV  D LG+E+KGY+  I GG DKQG
Sbjct: 1   MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQG+LT+GRVRLLL +G  C+                 CIV  ++S ++LVIVK+
Sbjct: 61  FPMKQGILTNGRVRLLLKKGQSCY--RERKNGERKRKSVRGCIVDANMSALSLVIVKK 116
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>RS6_KLUMA (P41798) 40S ribosomal protein S6 (Ribosomal protein S10)|
          Length = 235

 Score =  118 bits (296), Expect = 6e-27
 Identities = 63/118 (53%), Positives = 78/118 (66%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P  G QK VEIDD+ ++R  YDKRI QEV G+ +G+EFKGY+F I GG DKQG
Sbjct: 1   MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVL   RV+LL+ +GT C+                  IV  DL+V+ LVIVK+
Sbjct: 61  FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALVIVKK 116
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>RS6_CANGA (Q6FJH3) 40S ribosomal protein S6|
          Length = 236

 Score =  118 bits (296), Expect = 6e-27
 Identities = 62/118 (52%), Positives = 77/118 (65%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNIA P  G QK VE+DD+ ++R  YDKRI QE+ G+ +G+EFKGY F I GG DKQG
Sbjct: 1   MKLNIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVL   RV+LLL +G  C+                  IV  DL+V++LVIVK+
Sbjct: 61  FPMKQGVLLPTRVKLLLAKGHSCY--RPRRSGERKRKSVRGAIVGPDLAVLSLVIVKK 116
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>RS6_MANSE (Q94624) 40S ribosomal protein S6|
          Length = 253

 Score =  118 bits (295), Expect = 8e-27
 Identities = 60/118 (50%), Positives = 78/118 (66%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLN++ P TGCQK  E+ D+ KLR  Y+KR+  EV  DLLG+E+KGY+  + GG DKQG
Sbjct: 1   MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT+ RVRLL+ +G  C+                 CIV  +LSV+ LVIV++
Sbjct: 61  FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRK 116
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>RS6_YARLI (Q6C169) 40S ribosomal protein S6|
          Length = 242

 Score =  118 bits (295), Expect = 8e-27
 Identities = 60/118 (50%), Positives = 78/118 (66%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNIA P  G QK ++I+D+ ++R  Y+KR+ QEV  D LG+EFKGY+  I GG DKQG
Sbjct: 1   MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGV+   RVRLLL + + C+                 CIVS DLSV+++VIVK+
Sbjct: 61  FPMKQGVMHPTRVRLLLSKDSSCY--RSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQ 116
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>RS6_DEBHA (Q6BXH8) 40S ribosomal protein S6|
          Length = 236

 Score =  118 bits (295), Expect = 8e-27
 Identities = 61/118 (51%), Positives = 79/118 (66%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P  G QK ++I+D+ KLR  Y+KR+ QEV GD +G+EFKGYIF I GG DKQG
Sbjct: 1   MKLNISYPANGTQKCIDIEDEHKLRVFYEKRMGQEVEGDTVGDEFKGYIFRITGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGV+   RV+LLL +G  C+                 CIV+QDL+V+ L +VK+
Sbjct: 61  FPMKQGVMHPTRVKLLLAKGHSCY--RPRRTGERKRKSVRGCIVAQDLAVLALSVVKQ 116
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>RS6_DROME (P29327) 40S ribosomal protein S6|
          Length = 248

 Score =  117 bits (292), Expect = 2e-26
 Identities = 60/118 (50%), Positives = 77/118 (65%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLN++ P TGCQK  E+ D+ KLR  Y+KR+ Q V  D+LG+E+KGY   I GG DKQG
Sbjct: 1   MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT GRVRLLL +G  C+                 CIV  ++SV+ LV++K+
Sbjct: 61  FPMKQGVLTHGRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDANMSVLALVVLKK 116
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>RS6B_SCHPO (Q9C0Z7) 40S ribosomal protein S6-B|
          Length = 239

 Score =  117 bits (292), Expect = 2e-26
 Identities = 63/118 (53%), Positives = 75/118 (63%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P  G QK +EIDDD++LR   +KR+ QEV GD +G EF GY+F I GG DKQG
Sbjct: 1   MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPM QGVL   RVRLLL  G PC+                 CIV QDL+V+ L IVK+
Sbjct: 61  FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIVKQ 116
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>RS6_ASHGO (Q74ZK3) 40S ribosomal protein S6|
          Length = 236

 Score =  117 bits (292), Expect = 2e-26
 Identities = 59/118 (50%), Positives = 77/118 (65%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P  G QK +E+DD+ ++R  YDKRI QEV G+ +G+EFKGY+F I GG DKQG
Sbjct: 1   MKLNISYPVNGTQKTIEVDDEHRVRVFYDKRIGQEVNGEAVGDEFKGYVFKIAGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVL   RV+LL+ +GT C+                  IV  DL+V+ L+I K+
Sbjct: 61  FPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKK 116
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>RS6A_SCHPO (P05752) 40S ribosomal protein S6-A|
          Length = 239

 Score =  116 bits (291), Expect = 2e-26
 Identities = 62/118 (52%), Positives = 75/118 (63%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P  G QK +EIDDD++LR   +KR+ QEV GD +G EF GY+F I GG DKQG
Sbjct: 1   MKLNISYPANGTQKLIEIDDDRRLRVFMEKRMGQEVPGDSVGPEFAGYVFKITGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPM QGVL   RVRLLL  G PC+                 CIV QDL+V+ L I+K+
Sbjct: 61  FPMFQGVLLPHRVRLLLRAGHPCY--RPRRDGERKRKSVRGCIVGQDLAVLALAIIKQ 116
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>RS6_SPOFR (Q95V32) 40S ribosomal protein S6|
          Length = 253

 Score =  116 bits (290), Expect = 3e-26
 Identities = 60/118 (50%), Positives = 77/118 (65%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLN++ P TGCQK  E+ D+ KLR  Y+KR+  EV  D LG+E+KGY+  I GG DKQG
Sbjct: 1   MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRIAGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVLT+ RVRLL+ +G  C+                 CIV  +LSV+ LVIV++
Sbjct: 61  FPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRK 116
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>RS6_KLULA (Q6CM04) 40S ribosomal protein S6|
          Length = 236

 Score =  114 bits (284), Expect = 1e-25
 Identities = 60/118 (50%), Positives = 76/118 (64%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P  G QK +EIDD+ ++R  YDKRI QEV G+ +G+EFKGY+F I GG DKQG
Sbjct: 1   MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGESVGDEFKGYVFKIAGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVL   RV+LLL +G  C+                  IV  DL+V+ L+I K+
Sbjct: 61  FPMKQGVLLPTRVKLLLAKGHSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKK 116
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>RS6_YEAST (P02365) 40S ribosomal protein S6 (S10) (YS4) (RP9)|
          Length = 236

 Score =  112 bits (281), Expect = 3e-25
 Identities = 59/118 (50%), Positives = 75/118 (63%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQG 278
           MKLNI+ P  G QK  EIDD+ ++R  +DKRI QEV G+ +G+EFKGY+F I GG DKQG
Sbjct: 1   MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQG 60

Query: 279 FPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVKR 452
           FPMKQGVL   R++LLL +   C+                  IV  DL+V+ LVIVK+
Sbjct: 61  FPMKQGVLLPTRIKLLLTKNVSCY--RPRRDGERKRKSVRGAIVGPDLAVLALVIVKK 116
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>RS6_TOBAC (P29345) 40S ribosomal protein S6 (Fragment)|
          Length = 199

 Score =  100 bits (249), Expect = 2e-21
 Identities = 49/73 (67%), Positives = 53/73 (72%)
 Frame = +3

Query: 234 KGYIFTIMGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVS 413
           KGY+F IMGGCDKQGFPMKQGVLT GRVRLLL+RGTPCF                 CIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 414 QDLSVINLVIVKR 452
            DLSV+NLVIVK+
Sbjct: 61  PDLSVLNLVIVKK 73
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>RS6_LEIMA (Q9NE83) 40S ribosomal protein S6|
          Length = 249

 Score = 92.4 bits (228), Expect = 5e-19
 Identities = 51/118 (43%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQ 275
           MKLNIA P  G  K+ EI D+   R  L D R+  EV G + G EFKGYIF + GG DK 
Sbjct: 1   MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60

Query: 276 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 449
           GFPM  GVL S RV LL+ RG   F                 C+++ D++++N+ I K
Sbjct: 61  GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISK 118
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>RS6_LEIIN (O44012) 40S ribosomal protein S6|
          Length = 249

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
 Frame = +3

Query: 99  MKLNIANPTTGCQKKVEIDDDQKLR-NLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQ 275
           M LNIA P  G  K+ EI D+   R  L D R+  EV G + G EFKGYIF + GG DK 
Sbjct: 1   MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60

Query: 276 GFPMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 449
           GFPM  GVL S RV LL+ RG   F                 C+++ D++++N+ I K
Sbjct: 61  GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISK 118
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>RS6_ENCCU (Q8SRY0) 40S ribosomal protein S6|
          Length = 203

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 41/101 (40%), Positives = 57/101 (56%)
 Frame = +3

Query: 147 EIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQGFPMKQGVLTSGRVRLL 326
           EI+   ++R LYDK+I  +  G +LGEEF+G I  I GG D QGFPM  G LT  RVR L
Sbjct: 3   EIERRNEVR-LYDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPL 61

Query: 327 LHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 449
           L +G   +                  IVS+++ V+NL+I++
Sbjct: 62  LSKGDAGYRCRRKGVRRRKSVRGS--IVSEEICVLNLIILR 100
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>RS6E_PYRAB (Q9UYS3) 30S ribosomal protein S6e|
          Length = 125

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
 Frame = +3

Query: 93  STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 245
           +T KL I++P TG  K++EI   +    L  KRI  ++        + +L G+EF   + 
Sbjct: 2   ATFKLVISDPKTGIAKQIEITGPEA-EKLIGKRIGDQIPVKELGINLNELFGKEFPEDVK 60

Query: 246 FTIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 338
             I GG DK GFPM+  +    RVR+LL +G
Sbjct: 61  MEIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91
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>RS6E_PYRKO (Q5JDK8) 30S ribosomal protein S6e|
          Length = 125

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
 Frame = +3

Query: 93  STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 245
           +T KL I+NP  G  K+VEI   +  + L  +RI +E+        + ++ GEE      
Sbjct: 2   ATFKLVISNPKNGVAKQVEISGPEADK-LIGRRIGEEIPASELGLNLSEIFGEEIPADAK 60

Query: 246 FTIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 338
             I GG DK GFPM+  V    RV++LL RG
Sbjct: 61  LKITGGTDKDGFPMRPDVHGPRRVKILLSRG 91
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>RS6E_PYRFU (Q8U3H8) 30S ribosomal protein S6e|
          Length = 125

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
 Frame = +3

Query: 93  STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEV--------VGDLLGEEFKGYI- 245
           +T KL I++P +G  K+VEI   +    L  KRI  ++        + +L G+EF   + 
Sbjct: 2   ATFKLVISDPKSGIAKQVEITGAET-EKLIGKRIGDQIPAKELNINLNELFGKEFPEDVK 60

Query: 246 FTIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 338
             I GG DK GFPM+  +    RVR+LL +G
Sbjct: 61  LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKG 91
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>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e|
          Length = 130

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 37/116 (31%), Positives = 54/116 (46%)
 Frame = +3

Query: 102 KLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQGF 281
           K+ +A+P      +VE+  +     L  KRI   + G+++G    GY   I GG DK GF
Sbjct: 5   KVVVADPEKARSYQVEVKGEDA-EKLIGKRIGDVIDGEIVG--LPGYKLKITGGTDKDGF 61

Query: 282 PMKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 449
           PM+  +    RVRLLL  G P F                   +S+D+  +N VIV+
Sbjct: 62  PMRPDIHGPVRVRLLL-SGPPGFRPERKGERRRKTVRGNT--ISEDIVQVNTVIVE 114
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>RS6E_PYRHO (O58349) 30S ribosomal protein S6e|
          Length = 125

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
 Frame = +3

Query: 93  STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYI--------- 245
           +T KL I++P +G  K++EI        L  K+I  ++    LG + K            
Sbjct: 2   TTFKLVISDPKSGIAKQIEISG-ANAEKLIGKKIGDQIPVKELGLDLKALFGKDFPEDVK 60

Query: 246 FTIMGGCDKQGFPMKQGVLTSGRVRLLLHRG 338
             I GG DK GFPM+  +    RVR+LL +G
Sbjct: 61  MEIRGGTDKDGFPMRPDIHGPRRVRILLSKG 91
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>RS6E_METJA (P54067) 30S ribosomal protein S6e|
          Length = 131

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 29/78 (37%), Positives = 42/78 (53%)
 Frame = +3

Query: 96  TMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQ 275
           T K  +A+P TG   ++E D+      L  K+I +   G ++G E  GY   I GG D  
Sbjct: 3   TAKFVVADPKTGRCYQIEADNTP----LVGKKIGEVFDGKIIGLE--GYKLQIRGGTDSS 56

Query: 276 GFPMKQGVLTSGRVRLLL 329
           GFPM+  +  S +VR+LL
Sbjct: 57  GFPMRPDIHGSRKVRVLL 74
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>RS6E_METTH (O26360) 30S ribosomal protein S6e|
          Length = 126

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +3

Query: 135 QKKVEID-DDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQGFPMKQGVLTSG 311
           +K V+++ D  + R L    I  E  G ++G    GY   I GG DK GFPMK+ V  + 
Sbjct: 11  EKSVQMEVDPSESRGLIGLTIGDEFDGSIIG--LSGYKLKITGGSDKNGFPMKKTVPGAR 68

Query: 312 RVRLLLHRG 338
           R+R L+  G
Sbjct: 69  RIRSLVSGG 77
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>RS6E_PICTO (Q6L1H6) 30S ribosomal protein S6e|
          Length = 127

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 27/73 (36%), Positives = 38/73 (52%)
 Frame = +3

Query: 111 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQGFPMK 290
           IA+  TG   K EID +  +  L  +RI  E+ G     E  GY   I GG    GFPMK
Sbjct: 6   IADKNTGKTYKKEIDQNV-IGLLTGRRIGDEIDGSFF--EMPGYKLKITGGSANNGFPMK 62

Query: 291 QGVLTSGRVRLLL 329
           + +  +G+ R+L+
Sbjct: 63  KDLPIAGKKRILI 75
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>RS6E_THEAC (Q9HLA6) 30S ribosomal protein S6e|
          Length = 124

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
 Frame = +3

Query: 111 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQGFPMK 290
           IA+P TG   K EI  + ++ +L  ++I  E+ G     +  GY   + GG    GFPM+
Sbjct: 4   IADPKTGKTYKKEIPAE-RMGSLVGRKIGDEIDGVFF--DLVGYKLVVTGGSSIDGFPMR 60

Query: 291 QGVLTSGRVRLLL-----HRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 449
             + T G+ ++L+     +RG                      I+  D+S INL IV+
Sbjct: 61  SDLQTQGKKQILVSYKKGYRG---------KNGIRKRITVRGSIIGSDISQINLKIVQ 109
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>RS6E_NANEQ (Q74MJ5) 30S ribosomal protein S6e|
          Length = 126

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 26/76 (34%), Positives = 41/76 (53%)
 Frame = +3

Query: 93  STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDK 272
           S +K+ +++P +G   ++E  + Q L   Y K+I   + G  +G +  GY   I GG D 
Sbjct: 5   SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59

Query: 273 QGFPMKQGVLTSGRVR 320
            GFPM++ V   G VR
Sbjct: 60  AGFPMRKEV--EGAVR 73
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>RS6E_HALSA (Q9HMJ5) 30S ribosomal protein S6e|
          Length = 131

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 25/82 (30%), Positives = 40/82 (48%)
 Frame = +3

Query: 93  STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDK 272
           +T ++ +A+P +G   + E+D  Q       + I   V G  +G +  GY   I GG D 
Sbjct: 2   ATFQVAVADPESGRTYQFEVDG-QDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDD 58

Query: 273 QGFPMKQGVLTSGRVRLLLHRG 338
            G PM++ V  S  + +LL  G
Sbjct: 59  AGRPMREDVDGSDLMEVLLEGG 80
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>RS6E_METAC (Q8TQL4) 30S ribosomal protein S6e|
          Length = 136

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 26/82 (31%), Positives = 38/82 (46%)
 Frame = +3

Query: 93  STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDK 272
           +  K+ +++P  G   +++I D +    L  K I   V G + G    GY   I GGCD 
Sbjct: 2   ANFKVVVSDPKEGRAYQIDIKDAEA-NALIGKAIGDVVDGAIFG--LAGYKVQITGGCDG 58

Query: 273 QGFPMKQGVLTSGRVRLLLHRG 338
            GF MK  +    R R+L   G
Sbjct: 59  SGFVMKPDLPGPRRQRILTATG 80
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>RS6E_ARCFU (O29739) 30S ribosomal protein S6e|
          Length = 129

 Score = 35.8 bits (81), Expect = 0.052
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
 Frame = +3

Query: 111 IANPTTG--CQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQGFP 284
           I++P TG   QK VE         L  K+I   + G ++      Y   I GG D+ GFP
Sbjct: 7   ISDPKTGRAYQKVVE---GANANRLIGKQIGDVISGTIVDLP-PDYELKITGGTDRDGFP 62

Query: 285 MKQGVLTSGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 449
           M+  +  + R RLLL  G                      ++S+D+  IN V+VK
Sbjct: 63  MRPDLPGTARRRLLLSGGV---GFRPKEKGLRKRKGVRGRVISKDILQINTVVVK 114
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>RS6E_METMA (Q8PU79) 30S ribosomal protein S6e|
          Length = 136

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 25/82 (30%), Positives = 37/82 (45%)
 Frame = +3

Query: 93  STMKLNIANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDK 272
           +  K+ +++P      +++I D +    L  K I   V G + G    GY   I GGCD 
Sbjct: 2   ANFKVVVSDPKEARAYQIDIKDAEA-NALIGKSIGDVVDGSIFG--LAGYKVQITGGCDG 58

Query: 273 QGFPMKQGVLTSGRVRLLLHRG 338
            GF MK  +    R R+L   G
Sbjct: 59  SGFVMKPDLPGPRRQRILTATG 80
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>RS6E_AERPE (Q9Y9B6) 30S ribosomal protein S6e|
          Length = 245

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 26/70 (37%), Positives = 34/70 (48%)
 Frame = +3

Query: 141 KVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQGFPMKQGVLTSGRVR 320
           ++ + DD  ++ L    I     G L+G    G  F I GG D  G PM  GV  SGR +
Sbjct: 136 QIAVPDDVHVK-LAGLEIGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYK 192

Query: 321 LLLHRGTPCF 350
           +LL  G P F
Sbjct: 193 VLL-AGPPGF 201
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>RS6E_SULTO (Q975N7) 30S ribosomal protein S6e|
          Length = 213

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 28/98 (28%), Positives = 41/98 (41%)
 Frame = +3

Query: 156 DDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQGFPMKQGVLTSGRVRLLLHR 335
           D  KL N+   +I   +  ++ G   K     I GG D  GFPM+  V   G  R LL  
Sbjct: 122 DQSKLSNIIGAKIGDVIELNVSGIPLK---VKITGGSDNSGFPMRYDV-PGGAKRKLLLS 177

Query: 336 GTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 449
           G P F                  +++QD+  IN +I++
Sbjct: 178 GPPGFYPEEDGMRRKKTVRGN--MITQDIVQINTIIIR 213
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>RS6E_SULSO (Q980A6) 30S ribosomal protein S6e|
          Length = 214

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
 Frame = +3

Query: 138 KKVEIDDDQ-KLRNLYDKRISQEV-VGDLLGEEFKGYIFTIMGGCDKQGFPMKQGVLTSG 311
           K ++I  DQ K  NL   +I        L+G   K     I GG D  GFPM+  V+ + 
Sbjct: 115 KTLQISVDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAA 171

Query: 312 RVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVINLVIVK 449
           + ++LL  G P F                   +SQ++  IN +IV+
Sbjct: 172 KRKILL-SGPPGFYPNENGERRRKTIRGNT--ISQEIVQINTIIVR 214
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>RS6E_HALMA (P21509) 30S ribosomal protein S6e (HS13)|
          Length = 128

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +3

Query: 111 IANPTTGCQKKVEIDDDQKLRNLYDKRISQEVVGDLLGEEFKGYIFTIMGGCDKQGFPMK 290
           +++P  G   ++++D  Q       + +  EV G  +G +  GY   + GG D  G PM+
Sbjct: 7   VSDPEDGHTYQIDVDG-QDANRFIGRELGDEVDGGAVGLD--GYSLELTGGSDTSGRPMR 63

Query: 291 QGV 299
             V
Sbjct: 64  PDV 66
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>Y1923_STRMU (Q8DS88) UPF0168 protein SMU.1923c|
          Length = 163

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = +3

Query: 138 KKVEIDDDQKLRNLYDKRISQEVVGDLLGEE 230
           +KV  D +QK+R+ YD  +S  V+G+L+ +E
Sbjct: 85  EKVVNDIEQKIRSDYDSEVSSVVIGNLVMDE 115
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>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 5/52 (9%)
 Frame = -1

Query: 228  PHPEDHQLPPGRFSCHKGSAASGRHRSR-----PSSGTPWWGSRCSTSWWSG 88
            P P       GR S   G    G HR       P SGTP  G R  ++W  G
Sbjct: 1265 PGPAQRVPKSGRSSSLDGEHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRG 1316
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>RNC_PSEF5 (Q4KHT1) Ribonuclease III (EC 3.1.26.3) (RNase III)|
          Length = 229

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
 Frame = -2

Query: 299 HSLLHRETLLITATH----DREDITLEFLTQKITNYLLGDSLVIKVPQ 168
           +S   +E +L+  TH     R +  LEFL   I N++ G++L  + PQ
Sbjct: 14  YSFKDQELMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQ 61
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>NRAM_IARI5 (P03484) Neuraminidase (EC 3.2.1.18)|
          Length = 469

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 5/36 (13%)
 Frame = -1

Query: 153 RSRPSSGTPWWGSR-----CSTSWWSGGASWPAASN 61
           R RP     WW S      C TS   G  SWP  +N
Sbjct: 428 RGRPQETRVWWTSNSIVVFCGTSGTYGTGSWPDGAN 463
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>ILVD_THET8 (Q5SIY0) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 555

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +3

Query: 192 ISQEVVGDLLGEEFKGYIFTIMGG---CDKQGFPMKQGVLTSGRVRLLLHRGT 341
           +S+EV+ D +    +GY++  M G   CDK       GV+ SG   ++L+ GT
Sbjct: 92  VSREVIADSVELIAQGYLYDGMVGLSACDKTIPGTAMGVIRSGVPGMILYGGT 144
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>NRAM_IACKR (P09574) Neuraminidase (EC 3.2.1.18)|
          Length = 451

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 5/36 (13%)
 Frame = -1

Query: 153 RSRPSSGTPWWGSR-----CSTSWWSGGASWPAASN 61
           R RP     WW +      C TS   G  SWP  +N
Sbjct: 410 RGRPQENRVWWTTNSIVVFCGTSGTYGTGSWPDGAN 445
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>HYAL1_PIG (Q6RHW4) Hyaluronidase-1 precursor (EC 3.2.1.35) (Hyal-1)|
           (Hyaluronoglucosaminidase-1)
          Length = 435

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +2

Query: 236 GLYLHDHGWL**AGFPD----EARSANFWA-CPPSASQGHTLLPWFW 361
           G  L  HG     GFPD    + +S+N+   CPP  S  +  L W W
Sbjct: 190 GQTLRPHGLWGFYGFPDCYNYDFQSSNYTGQCPPGVSAQNDQLGWLW 236
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>ILVD_THET2 (Q72JA8) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 555

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +3

Query: 192 ISQEVVGDLLGEEFKGYIFTIMGG---CDKQGFPMKQGVLTSGRVRLLLHRGT 341
           +S+EV+ D +    +GY++  M G   CDK       GV+ SG   ++L+ GT
Sbjct: 92  VSREVIADSVELIAQGYLYDGMVGLSACDKTIPGTAMGVIRSGVPGMVLYGGT 144
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>SP8_HUMAN (Q8IXZ3) Transcription factor Sp8 (Specificity protein 8)|
          Length = 508

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 120 GSRCSTSWWSGGASWPAASNPDA 52
           GS  ++SWW  GA W    NP++
Sbjct: 221 GSAGASSWWDVGAGWIDVQNPNS 243
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>STRN4_MOUSE (P58404) Striatin-4 (Zinedin)|
          Length = 760

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 449 LDNHQVDNRQVLADNATTDGLSPALTITPAKTTEAR 342
           L++ +V  + +LAD    DGL P +T+ P  T + R
Sbjct: 346 LESRRVKLQGILADLRDVDGLPPKVTVPPPGTPQPR 381


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,694,138
Number of Sequences: 219361
Number of extensions: 1228202
Number of successful extensions: 4093
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 3898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4067
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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