| Clone Name | bast40f04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 387 bits (195), Expect = e-104 Identities = 315/355 (88%) Strand = Plus / Plus Query: 96 accatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgat 155 ||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 89 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 148 Query: 156 gacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgat 215 ||||||||||||||||| ||| ||||||||| ||||| |||||||| ||| ||| Sbjct: 149 gacgaccagaagctgcgtgcattttttgacaagaggatctctcaggaggtcagtggcgat 208 Query: 216 cttctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcag 275 |||||| |||||||||||||| ||| |||||| ||||||||| || ||||| |||||| Sbjct: 209 gctctgggcgaggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcag 268 Query: 276 ggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagg 335 |||||||| |||||||| |||||||| ||| |||| |||||||||||||| ||||||||| Sbjct: 269 ggtttccctatgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagg 328 Query: 336 ggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtc 395 |||||||||||||||||||| | |||||||||| |||||||||||||||| ||||| ||| Sbjct: 329 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 388 Query: 396 cgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 389 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaaga 443
>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full insert sequence Length = 1078 Score = 387 bits (195), Expect = e-104 Identities = 315/355 (88%) Strand = Plus / Plus Query: 96 accatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgat 155 ||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 90 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 149 Query: 156 gacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgat 215 ||||||||||||||||| ||| ||||||||| ||||| |||||||| ||| ||| Sbjct: 150 gacgaccagaagctgcgtgcattttttgacaagaggatctctcaggaggtcagtggcgat 209 Query: 216 cttctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcag 275 |||||| |||||||||||||| ||| |||||| ||||||||| || ||||| |||||| Sbjct: 210 gctctgggcgaggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcag 269 Query: 276 ggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagg 335 |||||||| |||||||| |||||||| ||| |||| |||||||||||||| ||||||||| Sbjct: 270 ggtttccctatgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagg 329 Query: 336 ggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtc 395 |||||||||||||||||||| | |||||||||| |||||||||||||||| ||||| ||| Sbjct: 330 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 389 Query: 396 cgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 390 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaaga 444
>ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 983 Score = 337 bits (170), Expect = 2e-89 Identities = 308/354 (87%) Strand = Plus / Plus Query: 97 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 156 |||||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 40 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 99 Query: 157 acgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatc 216 ||||||||||||| ||| ||||||||||||| ||||||||||| || ||||||| Sbjct: 100 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 159 Query: 217 ttctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagg 276 ||| || || ||||||||||| ||| | |||| ||||||||| |||||||| ||||| | Sbjct: 160 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 219 Query: 277 gtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggg 336 ||||||| |||||||| || ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 220 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 279 Query: 337 gcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtcc 396 | || || ||||||||||| | |||||||||| ||||||||||||| || ||||| |||| Sbjct: 280 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 339 Query: 397 gtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 |||||||||||||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 340 gtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaaga 393
>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full insert sequence Length = 1018 Score = 337 bits (170), Expect = 2e-89 Identities = 308/354 (87%) Strand = Plus / Plus Query: 97 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 156 |||||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 38 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 97 Query: 157 acgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatc 216 ||||||||||||| ||| ||||||||||||| ||||||||||| || ||||||| Sbjct: 98 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 157 Query: 217 ttctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagg 276 ||| || || ||||||||||| ||| | |||| ||||||||| |||||||| ||||| | Sbjct: 158 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 217 Query: 277 gtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggg 336 ||||||| |||||||| || ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 218 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 277 Query: 337 gcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtcc 396 | || || ||||||||||| | |||||||||| ||||||||||||| || ||||| |||| Sbjct: 278 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 337 Query: 397 gtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 |||||||||||||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 338 gtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaaga 391
>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full insert sequence Length = 990 Score = 337 bits (170), Expect = 2e-89 Identities = 308/354 (87%) Strand = Plus / Plus Query: 97 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 156 |||||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 37 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 96 Query: 157 acgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatc 216 ||||||||||||| ||| ||||||||||||| ||||||||||| || ||||||| Sbjct: 97 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 156 Query: 217 ttctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagg 276 ||| || || ||||||||||| ||| | |||| ||||||||| |||||||| ||||| | Sbjct: 157 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 216 Query: 277 gtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggg 336 ||||||| |||||||| || ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 217 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 276 Query: 337 gcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtcc 396 | || || ||||||||||| | |||||||||| ||||||||||||| || ||||| |||| Sbjct: 277 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 336 Query: 397 gtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 |||||||||||||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 337 gtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaaga 390
>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds Length = 1039 Score = 327 bits (165), Expect = 2e-86 Identities = 309/357 (86%) Strand = Plus / Plus Query: 94 ccaccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcg 153 ||||||||||||| |||||||||||||| |||| |||||||| |||||| | || |||| Sbjct: 65 ccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcg 124 Query: 154 atgacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtg 213 ||||||||||||||||||| | |||||||| || || ||||||||||| ||||| Sbjct: 125 atgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtg 184 Query: 214 atcttctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagc 273 || |||||||||||| |||||||||||| |||||| |||||||||||| ||||| |||| Sbjct: 185 atgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagc 244 Query: 274 agggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcaca 333 | || ||||| |||||||||||||| | |||||||| ||||| || |||||||| || | Sbjct: 245 aaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccata 304 Query: 334 ggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccg 393 |||| || || ||||||||||||| ||||||||||||||||||||||||||| ||||| | Sbjct: 305 gggggactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctg 364 Query: 394 tccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 ||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 365 tccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaaga 421
>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds Length = 1023 Score = 319 bits (161), Expect = 4e-84 Identities = 308/357 (86%) Strand = Plus / Plus Query: 94 ccaccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcg 153 ||||||||||||| |||||||||||||| | || ||||||||||||||| | || |||| Sbjct: 64 ccaccatgaagttcaacatcgcgaacccgtctaccgggtgccagaagaagctggaaatcg 123 Query: 154 atgacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtg 213 ||||||||||||| || || | |||||||| || |||||||||||||| ||||| Sbjct: 124 atgacgaccagaaactacgtgccttttatgaccgaaggatctcccaggaggtcagtggtg 183 Query: 214 atcttctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagc 273 || |||||||||||| || ||||||||| |||||| |||||||||||| ||||| || | Sbjct: 184 atgctctgggtgaggagtttaagggttatgtcttcaagatcatgggtggatgtgacaaac 243 Query: 274 agggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcaca 333 | || ||||| |||||||||||||| || |||||||| ||||||||||||||||| |||| Sbjct: 244 aaggcttcccaatgaagcaaggagttctgacttctggtcgtgtccgccttctgctccaca 303 Query: 334 ggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccg 393 | ||||| || |||||||| |||| ||||||||||||||||||||||||||| ||||| | Sbjct: 304 gaggcactccctgcttccgcggttatggcaggcgtaatggtgagcgcaggaggaagtctg 363 Query: 394 tccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 364 tccgtggttgtattgtgagccaagacctatctgttatcaacttggtaattgttaaga 420
>gb|AY103674.1| Zea mays PCO104001 mRNA sequence Length = 1198 Score = 319 bits (161), Expect = 4e-84 Identities = 308/357 (86%) Strand = Plus / Plus Query: 94 ccaccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcg 153 ||||||||||||| |||||||||||||| | || ||||||||||||||| | || |||| Sbjct: 192 ccaccatgaagttcaacatcgcgaacccgtctaccgggtgccagaagaagctggaaatcg 251 Query: 154 atgacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtg 213 ||||||||||||| || || | |||||||| || |||||||||||||| ||||| Sbjct: 252 atgacgaccagaaactacgtgccttttatgaccgaaggatctcccaggaggtcagtggtg 311 Query: 214 atcttctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagc 273 || |||||||||||| || ||||||||| |||||| |||||||||||| ||||| || | Sbjct: 312 atgctctgggtgaggagtttaagggttatgtcttcaagatcatgggtggatgtgacaaac 371 Query: 274 agggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcaca 333 | || ||||| |||||||||||||| || |||||||| ||||||||||||||||| |||| Sbjct: 372 aaggcttcccaatgaagcaaggagttctgacttctggtcgtgtccgccttctgctccaca 431 Query: 334 ggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccg 393 | ||||| || |||||||| |||| ||||||||||||||||||||||||||| ||||| | Sbjct: 432 gaggcactccctgcttccgcggttatggcaggcgtaatggtgagcgcaggaggaagtctg 491 Query: 394 tccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| |||| Sbjct: 492 tccgtggttgtattgtgagccaagacctatctgttatcaacttggtaattgttaaga 548
>gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like protein mRNA, complete cds Length = 1032 Score = 180 bits (91), Expect = 3e-42 Identities = 261/315 (82%), Gaps = 2/315 (0%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||||| |||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 52 atgaagttcaacattgcgaacccgactactgggtgccagaagaagctcgagatcgatgat 111 Query: 159 gaccagaagctgcggaacctt-tatgacaagagaatctcccaggaggtagttggtgatct 217 |||||||| || || | | || ||||||||||| |||||||||||||| || ||| Sbjct: 112 gaccagaaactccg-agctttctatgacaagaggatctcccaggaggttagcggagatgc 170 Query: 218 tctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcaggg 277 | |||| ||||| |||||||| || | |||| ||| ||||| || ||||| ||||| || Sbjct: 171 tttgggagaggagttcaagggatacgttttcaagattatgggaggatgtgacaagcaagg 230 Query: 278 tttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 337 |||||| |||||||| |||||| ||||| | || ||||| || ||||||||| |||| || Sbjct: 231 tttcccaatgaagcagggagtgttaactccaggccgtgttcgtcttctgctttacagagg 290 Query: 338 cacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccg 397 ||| ||||||||||||||| ||| ||||||||||||||||| || || ||||| ||||| Sbjct: 291 cactccttgcttccgtggtcatggtaggcgtaatggtgagcgaagaaggaagtctgtccg 350 Query: 398 tggttgcattgtcag 412 ||| ||||| ||||| Sbjct: 351 tggatgcatcgtcag 365
>gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence Length = 1065 Score = 172 bits (87), Expect = 6e-40 Identities = 260/315 (82%), Gaps = 2/315 (0%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||||| |||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 72 atgaagttcaacattgcgaacccgactactgggtgccagaagaagctcgagatcgatgat 131 Query: 159 gaccagaagctgcggaacctt-tatgacaagagaatctcccaggaggtagttggtgatct 217 |||||||| || || | | || | ||||||||| |||||||||||||| || ||| Sbjct: 132 gaccagaaactccg-agctttctttgacaagaggatctcccaggaggttagcggagatgc 190 Query: 218 tctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcaggg 277 | |||| ||||| |||||||| || | |||| ||| ||||| || ||||| ||||| || Sbjct: 191 tttgggagaggagttcaagggatacgttttcaagattatgggaggatgtgacaagcaagg 250 Query: 278 tttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 337 |||||| |||||||| |||||| ||||| | || ||||| || |||||||||||||| || Sbjct: 251 tttcccaatgaagcagggagtgttaactccaggccgtgttcgtcttctgcttcacagagg 310 Query: 338 cacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccg 397 ||| |||||||||||||||| ||| |||||||||||||| | | || ||||| ||||| Sbjct: 311 cactccttgcttccgtggttatggtaggcgtaatggtgaaagacgaaggaagtctgtccg 370 Query: 398 tggttgcattgtcag 412 ||| ||||||||||| Sbjct: 371 tggatgcattgtcag 385
>gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, complete cds Length = 1020 Score = 167 bits (84), Expect = 4e-38 Identities = 285/352 (80%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||||||||||| |||||||| || |||||||||||| |||||||||| ||| Sbjct: 63 atgaagttcaacatcgcgaatcccaccactggatgccagaagaagctcgagatcgacgac 122 Query: 159 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 218 || | ||| ||||| ||| |||||||| ||||| |||||||| | || ||| Sbjct: 123 gatctgaaactgcgagcattttgggacaagaggatctcacaggaggtcatcggagatgca 182 Query: 219 ctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggt 278 || ||||||||||| ||||| ||| |||||| || | || || ||||| || || || Sbjct: 183 ctcggtgaggaatttaagggctatgtcttcaaaattaccggaggttgtgacaaacaagga 242 Query: 279 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 338 || || |||||||| |||||||| ||| |||| ||||| | ||| ||||||||||||| Sbjct: 243 tttccaatgaagcagggagtgctgactcctggtcgtgttagacttttgcttcacagggga 302 Query: 339 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 398 || |||||||||||||| | ||| ||||||||||| ||||| ||||||||||| || ||| Sbjct: 303 actccttgcttccgtggatatggaaggcgtaatggagagcgtaggagaaagtctgttcgt 362 Query: 399 ggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 || ||||||||||||| |||||| |||||| | |||||| | ||||| |||| Sbjct: 363 gggtgcattgtcagcccagacctctctgttttgaacttgataattgtgaaga 414
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 336 ggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtc 395 |||||||||||||||||||| | |||||||||| |||||||||||||||| ||||| ||| Sbjct: 25670871 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 25670930 Query: 396 cgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 25670931 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaaga 25670985 Score = 127 bits (64), Expect = 3e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 226 aggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccga 285 ||||||||||||| ||| |||||| ||||||||| || ||||| |||||||||||||| | Sbjct: 25670681 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 25670740 Query: 286 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 337 ||||||| |||||||| ||| |||| |||||||||||||| ||||||||||| Sbjct: 25670741 tgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagggg 25670792 Score = 103 bits (52), Expect = 5e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 103 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 162 |||| |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 25669518 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 25669577 Query: 163 agaagctg 170 |||||||| Sbjct: 25669578 agaagctg 25669585
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 336 ggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtc 395 |||||||||||||||||||| | |||||||||| |||||||||||||||| ||||| ||| Sbjct: 124844 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 124903 Query: 396 cgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 124904 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaaga 124958 Score = 127 bits (64), Expect = 3e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 226 aggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccga 285 ||||||||||||| ||| |||||| ||||||||| || ||||| |||||||||||||| | Sbjct: 124654 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 124713 Query: 286 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 337 ||||||| |||||||| ||| |||| |||||||||||||| ||||||||||| Sbjct: 124714 tgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagggg 124765 Score = 103 bits (52), Expect = 5e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 103 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 162 |||| |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 123491 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 123550 Query: 163 agaagctg 170 |||||||| Sbjct: 123551 agaagctg 123558
>gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence Length = 1067 Score = 141 bits (71), Expect = 2e-30 Identities = 164/195 (84%) Strand = Plus / Plus Query: 220 tgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtt 279 |||||||||| ||||||||||| | |||| ||| ||||| || ||||| ||||| || | Sbjct: 185 tgggtgaggagttcaagggttacgttttcaagataatgggaggatgtgacaagcaagggt 244 Query: 280 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 339 |||| ||||| || |||||| ||||| |||| ||||| |||||| |||| ||||| || | Sbjct: 245 tccctatgaaacagggagtgttaactcctggccgtgttcgccttttgctccacagaggta 304 Query: 340 caccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtg 399 | |||||||||||||||| ||| ||||| ||||| |||||||| || ||||| ||||||| Sbjct: 305 ctccttgcttccgtggttatggtaggcgaaatggagagcgcagaaggaagtctgtccgtg 364 Query: 400 gttgcattgtcagcc 414 | ||||||||||||| Sbjct: 365 gatgcattgtcagcc 379 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||||| ||||| |||||||| ||||||||||| ||| | || |||||||| Sbjct: 64 atgaagttcaacattgcgaatcccaccactgggtgccagaaaaagcttgaaatcgatgat 123 Query: 159 gaccagaa 166 || ||||| Sbjct: 124 gatcagaa 131
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 139 bits (70), Expect = 9e-30 Identities = 97/106 (91%) Strand = Plus / Minus Query: 345 tgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgc 404 ||||||||||| | |||||||||| ||||||||||||| || ||||| |||||||||||| Sbjct: 15461353 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 15461294 Query: 405 attgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 |||||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 15461293 attgtcagccaagatctctctgttatcaacttggtgattgtaaaga 15461248 Score = 111 bits (56), Expect = 2e-21 Identities = 98/112 (87%) Strand = Plus / Minus Query: 226 aggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccga 285 ||||||||||||| ||| | |||| ||||||||| |||||||| ||||| |||||||| | Sbjct: 15461567 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15461508 Query: 286 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 337 ||||||| || ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 15461507 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15461456 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 103 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 162 |||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 15462534 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15462475 Query: 163 agaagctg 170 |||||||| Sbjct: 15462474 agaagctg 15462467 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 tttatgacaagagaatctcccagga 202 ||||||||||||| ||||||||||| Sbjct: 15461701 tttatgacaagaggatctcccagga 15461677
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 139 bits (70), Expect = 9e-30 Identities = 97/106 (91%) Strand = Plus / Plus Query: 345 tgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgc 404 ||||||||||| | |||||||||| ||||||||||||| || ||||| |||||||||||| Sbjct: 40173 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 40232 Query: 405 attgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 |||||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 40233 attgtcagccaagatctctctgttatcaacttggtgattgtaaaga 40278 Score = 111 bits (56), Expect = 2e-21 Identities = 98/112 (87%) Strand = Plus / Plus Query: 226 aggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccga 285 ||||||||||||| ||| | |||| ||||||||| |||||||| ||||| |||||||| | Sbjct: 39959 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 40018 Query: 286 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 337 ||||||| || ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 40019 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 40070 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 103 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 162 |||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 38992 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 39051 Query: 163 agaagctg 170 |||||||| Sbjct: 39052 agaagctg 39059 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 tttatgacaagagaatctcccagga 202 ||||||||||||| ||||||||||| Sbjct: 39825 tttatgacaagaggatctcccagga 39849
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 139 bits (70), Expect = 9e-30 Identities = 97/106 (91%) Strand = Plus / Minus Query: 345 tgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgc 404 ||||||||||| | |||||||||| ||||||||||||| || ||||| |||||||||||| Sbjct: 15455887 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 15455828 Query: 405 attgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 |||||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 15455827 attgtcagccaagatctctctgttatcaacttggtgattgtaaaga 15455782 Score = 111 bits (56), Expect = 2e-21 Identities = 98/112 (87%) Strand = Plus / Minus Query: 226 aggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccga 285 ||||||||||||| ||| | |||| ||||||||| |||||||| ||||| |||||||| | Sbjct: 15456101 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15456042 Query: 286 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 337 ||||||| || ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 15456041 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15455990 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 103 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 162 |||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 15457068 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15457009 Query: 163 agaagctg 170 |||||||| Sbjct: 15457008 agaagctg 15457001 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 tttatgacaagagaatctcccagga 202 ||||||||||||| ||||||||||| Sbjct: 15456235 tttatgacaagaggatctcccagga 15456211
>emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribosomal protein (rps6 gene) Length = 959 Score = 135 bits (68), Expect = 1e-28 Identities = 254/316 (80%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| || ||||| || |||||||| ||||||||||| ||| ||||||| || ||| Sbjct: 26 atgaagttcaatatcgccaatcccaccactgggtgccagaaaaagctcgagattgacgac 85 Query: 159 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 218 ||||||||||| || ||||||| ||| | || || || || || ||||||| | Sbjct: 86 gaccagaagctccgtgcattttatgataagcgtatttcacaagaagtcagtggtgatgct 145 Query: 219 ctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggt 278 || || ||||| |||||||| ||| | |||| |||||||| || ||||| ||||||||| Sbjct: 146 cttggcgaggagttcaagggatatgttttcaaaatcatgggaggttgtgacaagcagggt 205 Query: 279 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 338 || || |||||||| |||||||| ||| |||| || |||||||| |||| ||||| || Sbjct: 206 tttcccatgaagcagggagtgctgactcctggtcgcgtccgcctattgctgcacagagga 265 Query: 339 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 398 ||||||||||||||||||| ||| ||||| || || ||||| || || ||||| || ||| Sbjct: 266 acaccttgcttccgtggttatggaaggcgcaacggagagcgaagaaggaagtctgtgcgt 325 Query: 399 ggttgcattgtcagcc 414 || |||||||| |||| Sbjct: 326 gggtgcattgttagcc 341
>gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA Length = 1056 Score = 125 bits (63), Expect = 1e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 220 tgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtt 279 |||||||||| ||||| ||||| | |||| ||| ||||| || ||||| ||||| || | Sbjct: 169 tgggtgaggagttcaaaggttacgttttcaagataatgggaggatgtgacaagcaagggt 228 Query: 280 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 339 |||| |||||||| |||||| ||||| |||| ||||| |||||| |||| |||| || | Sbjct: 229 tcccaatgaagcagggagtgttaactcctggccgtgttcgccttttgctctacagaggta 288 Query: 340 caccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtg 399 | ||||||||||||||| ||| ||||| ||||| |||||||| || ||||| ||||||| Sbjct: 289 ctccttgcttccgtggtcatggtaggcgaaatggagagcgcagaaggaagtctgtccgtg 348 Query: 400 gttgcattgtcagcc 414 | ||||||||||||| Sbjct: 349 gatgcattgtcagcc 363
>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114, complete sequence Length = 94533 Score = 113 bits (57), Expect = 5e-22 Identities = 96/109 (88%) Strand = Plus / Plus Query: 342 ccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggt 401 |||||||||||||| | ||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 18674 ccttgcttccgtggatatggaaggcgtaatggagagcgcaggagaaagtctgtacgtgga 18733 Query: 402 tgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 ||||||||||||| ||||| |||||| | |||||||||||||| |||| Sbjct: 18734 tgcattgtcagccctgacctctctgttctgaacttggtgattgtgaaga 18782 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 103 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 162 |||| ||||||||||| || ||||| ||||||||||||||| |||| |||||||| |||| Sbjct: 17770 agttcaacatcgcgaatccaaccactgggtgccagaagaagctcgaaatcgatgatgacc 17829
>dbj|D78497.1| Brassica rapa mRNA for putative ribosomal protein, partial cds Length = 426 Score = 109 bits (55), Expect = 8e-21 Identities = 187/231 (80%) Strand = Plus / Plus Query: 220 tgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtt 279 |||| ||||| |||||||| || | |||| |||||||||||| ||||| ||||| |||| Sbjct: 71 tgggcgaggagttcaaggggtacgttttcaagatcatgggtgggtgtgacaagcaaggtt 130 Query: 280 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 339 |||| |||||||| ||||| ||||| |||| ||||| |||||| |||||||| | || | Sbjct: 131 tccctatgaagcagggagttttaactcctggccgtgttcgccttttgcttcaccgaggaa 190 Query: 340 caccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtg 399 | |||||||| | || ||| ||| | | ||| ||| | || |||||||| || |||| Sbjct: 191 ctccttgctttagaggacatgggaggaggactggagagaggagaagaaagtctgttcgtg 250 Query: 400 gttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 ||||||||||||||||||| || |||||| ||||| | || |||||||||| Sbjct: 251 gttgcattgtcagccaagatctctctgttctcaaccttgtcattgtcaaga 301
>gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, complete cds Length = 980 Score = 103 bits (52), Expect = 5e-19 Identities = 277/352 (78%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| |||| ||||| ||||| || |||||||||||| |||||||||| || Sbjct: 61 atgaagtttaacgtcgcaaacccaaccactggttgccagaagaagctcgagatcgacgat 120 Query: 159 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 218 |||||||| || || ||||||| |||||| |||| || || || ||| ||| | Sbjct: 121 gaccagaaactccgtgcgttttatgataagagactctctcaagaagtcagtggagatgct 180 Query: 219 ctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggt 278 |||| ||||| |||||||| || || |||| ||||||||| || ||||| ||||| || Sbjct: 181 ttgggcgaggagttcaagggatacattttcaagatcatgggagggtgtgacaagcaaggc 240 Query: 279 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 338 ||||| |||||||| ||||| ||||| | || ||||| |||||| |||||||| | || Sbjct: 241 ttcccaatgaagcagggagttttaactccaggccgtgttcgccttttgcttcaccgagga 300 Query: 339 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 398 || ||||||||| | || || ||| | | ||| ||| | || |||||||| || ||| Sbjct: 301 actccttgcttcagaggacacggaaggaggactggagagaggagaagaaagtctgttcgt 360 Query: 399 ggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 |||||||||||||||||||| || |||||| | ||| | || |||||||||| Sbjct: 361 ggttgcattgtcagccaagatctctctgttcttaaccttgtcattgtcaaga 412
>emb|X68050.1|NTRPS6 N.tabacum mRNA for ribosomal protein S6 Length = 804 Score = 93.7 bits (47), Expect = 5e-16 Identities = 149/183 (81%) Strand = Plus / Minus Query: 232 tcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccgatgaagc 291 |||| |||||| | |||| ||| ||||| || ||||| |||||||| || || ||||||| Sbjct: 804 tcaaaggttatgtgttcaagattatgggaggatgtgacaagcaggggtttccaatgaagc 745 Query: 292 aaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacaccttgcttcc 351 | ||||| ||||| | || ||||| |||||| |||| || | ||||| ||||| |||| Sbjct: 744 agggagttttaactccaggccgtgttcgccttttgctgtaccgcggcactccttgtttcc 685 Query: 352 gtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtca 411 | || | ||| ||| | |||||||||||||| |||||||| |||||||| |||||||||| Sbjct: 684 gggggtatggtaggagaaatggtgagcgcagaagaaagtctgtccgtggatgcattgtca 625 Query: 412 gcc 414 ||| Sbjct: 624 gcc 622
>emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal protein S6, partial Length = 920 Score = 93.7 bits (47), Expect = 5e-16 Identities = 185/231 (80%) Strand = Plus / Plus Query: 220 tgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtt 279 |||| |||||||| || || ||| | |||| ||||| ||||| ||||| || || || | Sbjct: 12 tgggcgaggaatttaaaggctatgttttcaagatcactggtgggtgtgacaaacaaggat 71 Query: 280 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 339 |||| |||||||| |||||||| || |||| ||||| || || ||||||| || || | Sbjct: 72 tcccaatgaagcagggagtgctgacacctggtcgtgttcgactcttgcttcatagaggaa 131 Query: 340 caccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtg 399 | ||||| |||||||| | ||| ||||| ||||| ||||| || |||||||| || |||| Sbjct: 132 ctccttgtttccgtggatatggaaggcgcaatggagagcgtagaagaaagtctgttcgtg 191 Query: 400 gttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaaga 450 | ||||||||||||| ||||| |||||| | |||||||| ||||| |||| Sbjct: 192 gatgcattgtcagccctgacctctctgttttgaacttggtaattgtgaaga 242
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete sequence Length = 106476 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 381 aggagaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtg 440 ||||||||||| ||||| ||||||||||||||||||||||| |||||| | |||||||| Sbjct: 89689 aggagaaagtctgtccgcggttgcattgtcagccaagacctctctgttcttaacttggtt 89630 Query: 441 attgtcaaga 450 |||||||||| Sbjct: 89629 attgtcaaga 89620 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 103 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 162 |||| ||| ||||||| || ||||| || |||||||||||| |||||||||||||||||| Sbjct: 90228 agttcaacgtcgcgaatccgaccactggatgccagaagaagctcgagatcgatgacgacc 90169 Query: 163 agaagctg 170 | |||||| Sbjct: 90168 aaaagctg 90161 Score = 50.1 bits (25), Expect = 0.006 Identities = 85/105 (80%) Strand = Plus / Minus Query: 246 ttcacgatcatgggtggctgtgataagcagggtttcccgatgaagcaaggagtgctaact 305 |||| ||||||||| || || || ||||| || ||||||||||| || ||||| || || Sbjct: 89824 ttcaagatcatgggaggatgcgacaagcaaggcttcccgatgaaacagggagttctcacc 89765 Query: 306 tctgggcgtgtccgccttctgcttcacaggggcacaccttgcttc 350 |||| |||||||| || |||||||| | ||||| ||||||||| Sbjct: 89764 cctggtcgtgtccgtctcttgcttcaccgaggcactccttgcttc 89720
>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full insert sequence Length = 1049 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 97 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 156 |||||||| | ||||| || |||||||||||||| ||||||||||| ||||||| |||| Sbjct: 61 ccatgaagctcaacattgcctaccccaccacggggcgccagaagaagctcgagattgatg 120 Query: 157 acgaccagaagctgcg 172 |||||||||||||||| Sbjct: 121 acgaccagaagctgcg 136 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 234 aagcagggtttccccatgaagcagggtgtgct 265
>ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural constituent of ribosome AT5G10360 (EMB3010) mRNA, complete cds Length = 1095 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 225 gaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccg 284 |||||||||||||| || | |||| ||||||||| || ||||| ||||| |||||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 285 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 332 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 385 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 444 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 372 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 431 Query: 445 tcaaga 450 | |||| Sbjct: 432 tgaaga 437 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 86 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 145 Query: 159 ga 160 || Sbjct: 146 ga 147
>gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 750 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 225 gaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccg 284 |||||||||||||| || | |||| ||||||||| || ||||| ||||| |||||||| Sbjct: 127 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 186 Query: 285 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 332 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 187 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 234 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 385 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 444 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 287 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 346 Query: 445 tcaaga 450 | |||| Sbjct: 347 tgaaga 352 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 1 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 60 Query: 159 ga 160 || Sbjct: 61 ga 62
>gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 225 gaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccg 284 |||||||||||||| || | |||| ||||||||| || ||||| ||||| |||||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 285 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 332 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 385 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 444 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 372 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 431 Query: 445 tcaaga 450 | |||| Sbjct: 432 tgaaga 437 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 86 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 145 Query: 159 ga 160 || Sbjct: 146 ga 147
>gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 225 gaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccg 284 |||||||||||||| || | |||| ||||||||| || ||||| ||||| |||||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 285 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 332 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 385 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 444 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 372 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 431 Query: 445 tcaaga 450 | |||| Sbjct: 432 tgaaga 437 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 86 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 145 Query: 159 ga 160 || Sbjct: 146 ga 147
>emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 969 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 225 gaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccg 284 |||||||||||||| || | |||| ||||||||| || ||||| ||||| |||||||| Sbjct: 195 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 254 Query: 285 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 332 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 255 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 302 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 385 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 444 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 355 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 414 Query: 445 tcaaga 450 | |||| Sbjct: 415 tgaaga 420 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 69 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 128 Query: 159 ga 160 || Sbjct: 129 ga 130
>emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 947 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 225 gaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccg 284 |||||||||||||| || | |||| ||||||||| || ||||| ||||| |||||||| Sbjct: 193 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 252 Query: 285 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 332 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 253 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 300 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 385 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 444 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 353 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 412 Query: 445 tcaaga 450 | |||| Sbjct: 413 tgaaga 418 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 67 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 126 Query: 159 ga 160 || Sbjct: 127 ga 128
>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6 Length = 957 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 225 gaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccg 284 |||||||||||||| || | |||| ||||||||| || ||||| ||||| |||||||| Sbjct: 127 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 186 Query: 285 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 332 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 187 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 234 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 385 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 444 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 287 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 346 Query: 445 tcaaga 450 | |||| Sbjct: 347 tgaaga 352 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 1 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 60 Query: 159 ga 160 || Sbjct: 61 ga 62
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project) Length = 113053 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 226 aggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccga 285 ||||||||||||| || | |||| ||||||||| || ||||| ||||| |||||||| | Sbjct: 105321 aggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttcccaa 105380 Query: 286 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 332 |||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 105381 tgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 105427 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 385 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 444 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 105577 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 105636 Query: 445 tcaaga 450 | |||| Sbjct: 105637 tgaaga 105642
>ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome AT4G31700 (RPS6) mRNA, complete cds Length = 993 Score = 71.9 bits (36), Expect = 2e-09 Identities = 246/316 (77%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 12 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 71 Query: 159 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 218 |||||||| || || |||| |||||||||||||| || || || ||| ||| | Sbjct: 72 gaccagaaactacgtgcgttttacgacaagagaatctctcaagaagtcagtggagatgct 131 Query: 219 ctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggt 278 |||| ||||| ||||| || || | |||| ||||| |||||| || |||||||| ||| Sbjct: 132 ttgggcgaggagttcaaaggatacgttttcaagatcaagggtggttgcgataagcaaggt 191 Query: 279 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 338 ||||| |||||||| ||||| | ||| | || ||||| |||||| |||||||| | || Sbjct: 192 ttcccaatgaagcagggagttttgactccaggccgtgttcgccttttgcttcaccgagga 251 Query: 339 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 398 || ||||||||| | || ||| ||| | | ||||||| | || |||||||| || ||| Sbjct: 252 actccttgcttcagaggacatggaaggagaactggtgagaggagaagaaagtctgttcgt 311 Query: 399 ggttgcattgtcagcc 414 ||||||||||| |||| Sbjct: 312 ggttgcattgtgagcc 327
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence Length = 137979 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 363 aggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaagacctg 422 ||||||||||| ||||| || || ||||| || ||||| ||||||||||||| |||||| Sbjct: 135731 aggcgtaatggagagcgaagaaggaagtctgttcgtgggtgcattgtcagcccagacctc 135672 Query: 423 tctgttatcaacttggtgattgtcaaga 450 |||||| | |||||||| ||||| |||| Sbjct: 135671 tctgttctgaacttggttattgtgaaga 135644
>gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989) putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 962 Score = 71.9 bits (36), Expect = 2e-09 Identities = 246/316 (77%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 14 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 73 Query: 159 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 218 |||||||| || || |||| |||||||||||||| || || || ||| ||| | Sbjct: 74 gaccagaaactacgtgcgttttacgacaagagaatctctcaagaagtcagtggagatgct 133 Query: 219 ctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggt 278 |||| ||||| ||||| || || | |||| ||||| |||||| || |||||||| ||| Sbjct: 134 ttgggcgaggagttcaaaggatacgttttcaagatcaagggtggttgcgataagcaaggt 193 Query: 279 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 338 ||||| |||||||| ||||| | ||| | || ||||| |||||| |||||||| | || Sbjct: 194 ttcccaatgaagcagggagttttgactccaggccgtgttcgccttttgcttcaccgagga 253 Query: 339 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 398 || ||||||||| | || ||| ||| | | ||||||| | || |||||||| || ||| Sbjct: 254 actccttgcttcagaggacatggaaggagaactggtgagaggagaagaaagtctgttcgt 313 Query: 399 ggttgcattgtcagcc 414 ||||||||||| |||| Sbjct: 314 ggttgcattgtgagcc 329
>gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 784 Score = 71.9 bits (36), Expect = 2e-09 Identities = 246/316 (77%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 1 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 60 Query: 159 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 218 |||||||| || || |||| |||||||||||||| || || || ||| ||| | Sbjct: 61 gaccagaaactacgtgcgttttacgacaagagaatctctcaagaagtcagtggagatgct 120 Query: 219 ctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggt 278 |||| ||||| ||||| || || | |||| ||||| |||||| || |||||||| ||| Sbjct: 121 ttgggcgaggagttcaaaggatacgttttcaagatcaagggtggttgcgataagcaaggt 180 Query: 279 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 338 ||||| |||||||| ||||| | ||| | || ||||| |||||| |||||||| | || Sbjct: 181 ttcccaatgaagcagggagttttgactccaggccgtgttcgccttttgcttcaccgagga 240 Query: 339 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 398 || ||||||||| | || ||| ||| | | ||||||| | || |||||||| || ||| Sbjct: 241 actccttgcttcagaggacatggaaggagaactggtgagaggagaagaaagtctgttcgt 300 Query: 399 ggttgcattgtcagcc 414 ||||||||||| |||| Sbjct: 301 ggttgcattgtgagcc 316
>gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 989 Score = 71.9 bits (36), Expect = 2e-09 Identities = 246/316 (77%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 8 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 67 Query: 159 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 218 |||||||| || || |||| |||||||||||||| || || || ||| ||| | Sbjct: 68 gaccagaaactacgtgcgttttacgacaagagaatctctcaagaagtcagtggagatgct 127 Query: 219 ctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggt 278 |||| ||||| ||||| || || | |||| ||||| |||||| || |||||||| ||| Sbjct: 128 ttgggcgaggagttcaaaggatacgttttcaagatcaagggtggttgcgataagcaaggt 187 Query: 279 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 338 ||||| |||||||| ||||| | ||| | || ||||| |||||| |||||||| | || Sbjct: 188 ttcccaatgaagcagggagttttgactccaggccgtgttcgccttttgcttcaccgagga 247 Query: 339 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 398 || ||||||||| | || ||| ||| | | ||||||| | || |||||||| || ||| Sbjct: 248 actccttgcttcagaggacatggaaggagaactggtgagaggagaagaaagtctgttcgt 307 Query: 399 ggttgcattgtcagcc 414 ||||||||||| |||| Sbjct: 308 ggttgcattgtgagcc 323
>gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-32i15, complete sequence Length = 96221 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 363 aggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaagacctg 422 ||||||||||| ||||| || || ||||| || ||||| ||||||||||||| |||||| Sbjct: 93822 aggcgtaatggagagcgaagaaggaagtctgttcgtgggtgcattgtcagcccagacctc 93881 Query: 423 tctgttatcaacttggtgattgtcaaga 450 |||||| | |||||||| ||||| |||| Sbjct: 93882 tctgttctgaacttggttattgtgaaga 93909
>emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 981 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 225 gaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttcccg 284 |||||||||||||| || | |||| ||||||||| || ||| | ||||| |||||||| Sbjct: 193 gaggaattcaagggatacgtattcaagatcatgggaggatgttacaagcaaggtttccca 252 Query: 285 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 332 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 253 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 300 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 385 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 444 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 353 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 412 Query: 445 tcaaga 450 | |||| Sbjct: 413 tgaaga 418 Score = 44.1 bits (22), Expect = 0.39 Identities = 52/62 (83%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 67 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 126 Query: 159 ga 160 || Sbjct: 127 ga 128
>gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6 (rps6) mRNA, complete cds Length = 945 Score = 71.9 bits (36), Expect = 2e-09 Identities = 246/316 (77%) Strand = Plus / Plus Query: 99 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 158 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 4 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 63 Query: 159 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 218 |||||||| || || |||| |||||||||||||| || || || ||| ||| | Sbjct: 64 gaccagaaactacgtgcgttttacgacaagagaatctctcaagaagtcagtggagatgct 123 Query: 219 ctgggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggt 278 |||| ||||| ||||| || || | |||| ||||| |||||| || |||||||| ||| Sbjct: 124 ttgggcgaggagttcaaaggatacgttttcaagatcaagggtggttgcgataagcaaggt 183 Query: 279 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 338 ||||| |||||||| ||||| | ||| | || ||||| |||||| |||||||| | || Sbjct: 184 ttcccaatgaagcagggagttttgactccaggccgtgttcgccttttgcttcaccgagga 243 Query: 339 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 398 || ||||||||| | || ||| ||| | | ||||||| | || |||||||| || ||| Sbjct: 244 actccttgcttcagaggacatggaaggagaactggtgagaggagaagaaagtctgttcgt 303 Query: 399 ggttgcattgtcagcc 414 ||||||||||| |||| Sbjct: 304 ggttgcattgtgagcc 319
>emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 69.9 bits (35), Expect = 7e-09 Identities = 221/283 (78%) Strand = Plus / Plus Query: 132 tgccagaagaaggtcgagatcgatgacgaccagaagctgcggaacctttatgacaagaga 191 |||||||||||| |||||||||| || |||||||| || || |||| ||||||||| Sbjct: 30 tgccagaagaagctcgagatcgacgatgaccagaaactacgtgcgttttacgacaagaga 89 Query: 192 atctcccaggaggtagttggtgatcttctgggtgaggaattcaagggttatatcttcacg 251 ||||| || || || ||| ||| | |||| ||||| ||||| || || | |||| | Sbjct: 90 atctctcaagaagtcagtggagatgctttgggcgaggagttcaaaggatacgttttcaag 149 Query: 252 atcatgggtggctgtgataagcagggtttcccgatgaagcaaggagtgctaacttctggg 311 |||| |||||| || |||||||| |||||||| |||||||| ||||| | ||| | || Sbjct: 150 atcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgactccaggc 209 Query: 312 cgtgtccgccttctgcttcacaggggcacaccttgcttccgtggttttggcaggcgtaat 371 ||||| |||||| |||||||| | || || ||||||||| | || ||| ||| | | | Sbjct: 210 cgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaaggagaact 269 Query: 372 ggtgagcgcaggagaaagtccgtccgtggttgcattgtcagcc 414 |||||| | || |||||||| || |||||||||||||| |||| Sbjct: 270 ggtgagaggagaagaaagtctgttcgtggttgcattgtgagcc 312
>emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 689 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 385 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 444 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 33 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 92 Query: 445 tcaaga 450 | |||| Sbjct: 93 tgaaga 98
>ref|XM_329546.1| Neurospora crassa OR74A hypothetical protein (NCU08502.1) partial mRNA Length = 720 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 372 ggtgagcgcaggagaaagtccgtccgtggttgcat 406 |||||||||| ||||||||||||||| |||||||| Sbjct: 268 ggtgagcgcaagagaaagtccgtccgcggttgcat 302
>ref|XM_958338.1| Neurospora crassa OR74A hypothetical protein (NCU08502.1) partial mRNA Length = 720 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 372 ggtgagcgcaggagaaagtccgtccgtggttgcat 406 |||||||||| ||||||||||||||| |||||||| Sbjct: 268 ggtgagcgcaagagaaagtccgtccgcggttgcat 302
>emb|BX842594.1| Neurospora crassa DNA linkage group II BAC clone B18P7 Length = 95637 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 372 ggtgagcgcaggagaaagtccgtccgtggttgcat 406 |||||||||| ||||||||||||||| |||||||| Sbjct: 44726 ggtgagcgcaagagaaagtccgtccgcggttgcat 44692
>ref|XM_360693.1| Magnaporthe grisea 70-15 hypothetical protein (MG03236.4) partial mRNA Length = 720 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 371 tggtgagcgcaggagaaagtccgtccgtggttg 403 ||||||||||| ||||||||||||||| ||||| Sbjct: 267 tggtgagcgcaagagaaagtccgtccgcggttg 299
>ref|XM_660817.1| Cryptosporidium hominis TU502 ribosomal protein S6e (Chro.20458) partial mRNA Length = 666 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 220 tgggtgaggaattcaagggttatat 244 ||||||||||||||||||||||||| Sbjct: 122 tgggtgaggaattcaagggttatat 146
>ref|XM_626605.1| Cryptosporidium parvum Iowa II 40S ribosomal protein S6 (cgd2_4260), partial mRNA Length = 678 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 220 tgggtgaggaattcaagggttatat 244 ||||||||||||||||||||||||| Sbjct: 134 tgggtgaggaattcaagggttatat 158
>ref|XM_380810.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG00634.1) partial mRNA Length = 714 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 371 tggtgagcgcaggagaaagtccgtccgtggttgcat 406 ||||||||||| ||||||||| |||||||| ||||| Sbjct: 261 tggtgagcgcaagagaaagtctgtccgtggctgcat 296
>ref|NM_061034.3| Caenorhabditis elegans Ribosomal Protein, Small subunit family member (rps-6) (rps-6) mRNA, complete cds Length = 806 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 375 gagcgcaggagaaagtccgtccgtggttgcat 406 ||||||| |||||||||||||||||| ||||| Sbjct: 290 gagcgcaagagaaagtccgtccgtggatgcat 321
>emb|AL132902.4|CEY71A12B Caenorhabditis elegans YAC Y71A12B, complete sequence Length = 137184 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 375 gagcgcaggagaaagtccgtccgtggttgcat 406 ||||||| |||||||||||||||||| ||||| Sbjct: 84063 gagcgcaagagaaagtccgtccgtggatgcat 84094
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Minus Query: 132 tgccagaagaaggtcgagatcgatgacgaccagaa 166 |||||||||||| |||||||||| || |||||||| Sbjct: 113539 tgccagaagaagctcgagatcgacgatgaccagaa 113505 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 371 tggtgagcgcaggagaaagtccgtccgtggttgcattgtcagcc 414 ||||||| | || |||||||| || |||||||||||||| |||| Sbjct: 112824 tggtgagaggagaagaaagtctgttcgtggttgcattgtgagcc 112781
>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII project) Length = 90902 Score = 46.1 bits (23), Expect = 0.099 Identities = 32/35 (91%) Strand = Plus / Plus Query: 132 tgccagaagaaggtcgagatcgatgacgaccagaa 166 |||||||||||| |||||||||| || |||||||| Sbjct: 39732 tgccagaagaagctcgagatcgacgatgaccagaa 39766 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 371 tggtgagcgcaggagaaagtccgtccgtggttgcattgtcagcc 414 ||||||| | || |||||||| || |||||||||||||| |||| Sbjct: 40447 tggtgagaggagaagaaagtctgttcgtggttgcattgtgagcc 40490
>ref|NM_001015548.1| Bos taurus ribosomal protein S6 (RPS6), mRNA Length = 817 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 267 gataagcagggtttcccgatgaagca 292 ||||||||||||||||| |||||||| Sbjct: 198 gataagcagggtttccccatgaagca 223
>ref|XM_447041.1| Candida glabrata CBS138, CAGL0H05643g partial mRNA Length = 711 Score = 44.1 bits (22), Expect = 0.39 Identities = 61/74 (82%) Strand = Plus / Plus Query: 222 ggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttc 281 ||||| |||||||||||||| | ||||| ||||| ||||| || ||||| |||||| Sbjct: 124 ggtgatgaattcaagggttacaccttcaagatcaccggtggtaacgacaagcaaggtttc 183 Query: 282 ccgatgaagcaagg 295 || ||||||||||| Sbjct: 184 ccaatgaagcaagg 197
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 44.1 bits (22), Expect = 0.39 Identities = 61/74 (82%) Strand = Plus / Plus Query: 222 ggtgaggaattcaagggttatatcttcacgatcatgggtggctgtgataagcagggtttc 281 ||||| |||||||||||||| | ||||| ||||| ||||| || ||||| |||||| Sbjct: 560268 ggtgatgaattcaagggttacaccttcaagatcaccggtggtaacgacaagcaaggtttc 560327 Query: 282 ccgatgaagcaagg 295 || ||||||||||| Sbjct: 560328 ccaatgaagcaagg 560341
>gb|BC102493.1| Bos taurus ribosomal protein S6, mRNA (cDNA clone MGC:127553 IMAGE:7953793), complete cds Length = 869 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 267 gataagcagggtttcccgatgaagca 292 ||||||||||||||||| |||||||| Sbjct: 211 gataagcagggtttccccatgaagca 236
>gb|AY911358.1| Bos taurus clone IMAGE:7961497 ribosomal protein S6-like mRNA, complete cds Length = 832 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 267 gataagcagggtttcccgatgaagca 292 ||||||||||||||||| |||||||| Sbjct: 211 gataagcagggtttccccatgaagca 236
>gb|BT021025.1| Bos taurus ribosomal protein S6 (RPS6), mRNA, complete cds Length = 817 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 267 gataagcagggtttcccgatgaagca 292 ||||||||||||||||| |||||||| Sbjct: 198 gataagcagggtttccccatgaagca 223
>emb|AL928597.19| Mouse DNA sequence from clone RP23-373N5 on chromosome 4, complete sequence Length = 163961 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 256 tgggtggctgtgataagcaggg 277 |||||||||||||||||||||| Sbjct: 150128 tgggtggctgtgataagcaggg 150149
>emb|AL445208.11| Human DNA sequence from clone RP11-104N3 on chromosome 6, complete sequence Length = 60742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 aggaggtagttggtgatcttc 219 ||||||||||||||||||||| Sbjct: 14137 aggaggtagttggtgatcttc 14157
>ref|XM_505593.1| Yarrowia lipolytica CLIB122, YALI0F18766g predicted mRNA Length = 729 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagt 298 |||||||||||||| |||||||| ||||| Sbjct: 172 aagcagggtttccccatgaagcagggagt 200
>emb|Z54308.1|SPAC13G6 S.pombe chromosome I cosmid c13G6 Length = 33481 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Minus Query: 370 atggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaaga 418 |||||||||||| | | || || |||||||||||||| ||| ||||||| Sbjct: 16137 atggtgagcgcaagcgtaaatctgtccgtggttgcatcgtcggccaaga 16089
>emb|BX296567.23| Zebrafish DNA sequence from clone DKEY-261P22 in linkage group 15, complete sequence Length = 224041 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgct 301 |||||| ||||||||| |||||||||||| Sbjct: 212982 cagggtatcccgatgatgcaaggagtgct 213010 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 202141 cagggtatcccgatgatgcaaggagtgc 202168
>emb|BX649506.13| Zebrafish DNA sequence from clone DKEY-43L23 in linkage group 22, complete sequence Length = 110752 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 273 cagggtttcccgatgaagcaaggagtgct 301 |||||| ||||||||| |||||||||||| Sbjct: 6787 cagggtatcccgatgatgcaaggagtgct 6759
>ref|NM_001018234.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC13G6.07c), partial mRNA Length = 720 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 370 atggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaaga 418 |||||||||||| | | || || |||||||||||||| ||| ||||||| Sbjct: 266 atggtgagcgcaagcgtaaatctgtccgtggttgcatcgtcggccaaga 314
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 agaagaaggtcgagatcgatg 156 ||||||||||||||||||||| Sbjct: 10410333 agaagaaggtcgagatcgatg 10410353
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1104_G11 Length = 140093 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 agaagaaggtcgagatcgatg 156 ||||||||||||||||||||| Sbjct: 118038 agaagaaggtcgagatcgatg 118058
>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B03 Length = 147748 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 agaagaaggtcgagatcgatg 156 ||||||||||||||||||||| Sbjct: 10712 agaagaaggtcgagatcgatg 10732
>emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in linkage group 14, complete sequence Length = 193551 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 273 cagggtttcccgatgaagcaaggagtgct 301 |||||| ||||||||| |||||||||||| Sbjct: 88942 cagggtatcccgatgatgcaaggagtgct 88914 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 35037 cagggtatcccgatgatgcaaggagtgc 35064
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 270 aagcagggtttcccgatgaagcaaggagt 298 |||||||||||||| |||||||| ||||| Sbjct: 2505687 aagcagggtttccccatgaagcagggagt 2505659
>gb|M36382.1|YSPRPS6A S.pombe ribosomal protein S6 (rps6) gene, complete cds Length = 1940 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 370 atggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaaga 418 |||||||||||| | | || || |||||||||||||| ||| ||||||| Sbjct: 760 atggtgagcgcaagcgtaaatctgtccgtggttgcatcgtcggccaaga 808
>gb|AY308769.1| Bothus lunatus recombinase activating gene-1 (RAG1) gene, partial cds Length = 1455 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggaggtagttggtgatcttc 219 |||||||||||||||||||| Sbjct: 1315 ggaggtagttggtgatcttc 1296
>gb|AY430215.1| Spirinchus thaleichthys recombination activating protein 1 (RAG1) gene, partial cds Length = 1472 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggaggtagttggtgatcttc 219 |||||||||||||||||||| Sbjct: 1335 ggaggtagttggtgatcttc 1316
>gb|AY380539.1| Salangichthys microdon recombination-activating protein 1 (RAG1) gene, partial cds Length = 1506 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggaggtagttggtgatcttc 219 |||||||||||||||||||| Sbjct: 1342 ggaggtagttggtgatcttc 1323
>gb|AY380538.1| Hypomesus olidus recombination-activating protein 1 (RAG1) gene, partial cds Length = 1555 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggaggtagttggtgatcttc 219 |||||||||||||||||||| Sbjct: 1364 ggaggtagttggtgatcttc 1345
>gb|AY380537.1| Thaleichthys pacificus recombination-activating protein 1 (RAG1) gene, partial cds Length = 1556 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggaggtagttggtgatcttc 219 |||||||||||||||||||| Sbjct: 1365 ggaggtagttggtgatcttc 1346
>gb|AY380536.1| Plecoglossus altivelis recombination-activating protein 1 (RAG1) gene, partial cds Length = 1556 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggaggtagttggtgatcttc 219 |||||||||||||||||||| Sbjct: 1365 ggaggtagttggtgatcttc 1346
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aggtcgagatcgatgacgac 161 |||||||||||||||||||| Sbjct: 2210306 aggtcgagatcgatgacgac 2210325
>ref|NM_012652.1| Rattus norvegicus solute carrier family 9, member 1 (Slc9a1), mRNA Length = 4581 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 aggtagttggtgatcttctg 221 |||||||||||||||||||| Sbjct: 2824 aggtagttggtgatcttctg 2805
>ref|XM_746654.1| Aspergillus fumigatus Af293 40S ribosomal protein S6 (Afu4g10800) partial mRNA Length = 714 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 ggtgaggaattcaagggttatatcttca 249 ||||| |||||||||||||| ||||||| Sbjct: 124 ggtgatgaattcaagggttacatcttca 151
>emb|BX950868.13| Zebrafish DNA sequence from clone DKEY-54I3 in linkage group 5, complete sequence Length = 204339 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 137643 cagggtatcccgatgatgcaaggagtgc 137670
>emb|CR847906.11| Zebrafish DNA sequence from clone DKEYP-4C4 in linkage group 6, complete sequence Length = 198346 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 10081 cagggtatcccgatgatgcaaggagtgc 10108
>emb|BX465848.13| Zebrafish DNA sequence from clone RP71-84E6, complete sequence Length = 179411 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 57412 cagggtatcccgatgatgcaaggagtgc 57439
>ref|NM_016981.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1 (Slc9a1), mRNA Length = 4126 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 aggtagttggtgatcttctg 221 |||||||||||||||||||| Sbjct: 2378 aggtagttggtgatcttctg 2359
>gb|BC052708.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1, mRNA (cDNA clone MGC:64648 IMAGE:5702902), complete cds Length = 3907 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 aggtagttggtgatcttctg 221 |||||||||||||||||||| Sbjct: 2717 aggtagttggtgatcttctg 2698
>gb|BC051431.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1, mRNA (cDNA clone MGC:58902 IMAGE:6529306), complete cds Length = 3989 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 aggtagttggtgatcttctg 221 |||||||||||||||||||| Sbjct: 2182 aggtagttggtgatcttctg 2163
>gb|AY237124.1| Anopheles stephensi ribosomal protein S6 mRNA, complete cds Length = 1526 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 215 aagcagggtttccccatgaagcagggtgtgct 246
>emb|BX066711.1|CNS09NMZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC50AE02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 951 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 516 aagcagggtttccccatgaagcagggtgtgct 547
>emb|BX059515.1|CNS09I33 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC4BE11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 184 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX058216.1|CNS09H30 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC38BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 892 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX056134.1|CNS09FH6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC35AH10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 245 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX055757.1|CNS09F6P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC34CA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 561 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX050628.1|CNS09B88 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC27AH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 547 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX030915.1|CNS08W0N Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46AF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 923 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX048890.1|CNS099VY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC24BE09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 376 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX048575.1|CNS099N7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC23DC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 692 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX047758.1|CNS0990I Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC22BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 192 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX044475.1|CNS096HB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC18AG01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 337 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 159 aagcagggtttccccatgaagcagggtgtgct 190
>emb|BX039668.1|CNS092RS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC10AC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 878 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX037239.1|CNS090WB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA9CE05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 854 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX032182.1|CNS08WZU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47DG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 648 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX031918.1|CNS08WSI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47CC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 626 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX029508.1|CNS08UXK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA44AD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 905 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX028944.1|CNS08UHW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA43BA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 535 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX028102.1|CNS08TUI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42AB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 625 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX027648.1|CNS08THW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41BE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 777 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 247 aagcagggtttccccatgaagcagggtgtgct 278
>emb|BX027277.1|CNS08T7L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA40DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 622 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX026133.1|CNS08SBT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA4BC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 539 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX025301.1|CNS08ROP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA38DB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 628 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX019556.1|CNS08N94 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA29DD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 126 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX020908.1|CNS08OAO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA30DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 609 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX019904.1|CNS08NIS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA3BD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 869 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 89 aagcagggtttccccatgaagcagggtgtgct 120
>emb|BX017102.1|CNS08LCY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA25CG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 233 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX016862.1|CNS08L6A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA25BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 555 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX015584.1|CNS08K6S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23BF07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 838 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX015062.1|CNS08JSA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA22CE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 202 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX013131.1|CNS08IAN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA2DB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 922 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX010706.1|CNS08GFA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17AG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 625 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX010177.1|CNS08G0L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA16BE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 726 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 208 aagcagggtttccccatgaagcagggtgtgct 239
>emb|BX009176.1|CNS08F8S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA14DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 896 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX548011.28| Zebrafish DNA sequence from clone DKEY-237G15, complete sequence Length = 211004 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 10774 cagggtatcccgatgatgcaaggagtgc 10747
>emb|CR790376.10| Zebrafish DNA sequence from clone DKEY-66K12 in linkage group 4, complete sequence Length = 92591 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 64189 cagggtatcccgatgatgcaaggagtgc 64216 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 10785 cagggtatcccgatgatgcaaggagtgc 10812
>emb|BX321871.5| Zebrafish DNA sequence from clone CH211-241N15 in linkage group 8, complete sequence Length = 174723 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 7470 cagggtatcccgatgatgcaaggagtgc 7497
>gb|AC101986.10| Mus musculus chromosome 7, clone RP24-353K18, complete sequence Length = 187803 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ctgggtgaggaattcaaggg 238 |||||||||||||||||||| Sbjct: 16174 ctgggtgaggaattcaaggg 16155
>gb|AC158574.6| Mus musculus chromosome 7, clone RP24-275O6, complete sequence Length = 160525 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ctgggtgaggaattcaaggg 238 |||||||||||||||||||| Sbjct: 68236 ctgggtgaggaattcaaggg 68255
>emb|BX469910.10| Zebrafish DNA sequence from clone CH211-64I20 in linkage group 8, complete sequence Length = 198019 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 98644 cagggtatcccgatgatgcaaggagtgc 98617 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 60957 cagggtatcccgatgatgcaaggagtgc 60984
>emb|BX571711.8| Zebrafish DNA sequence from clone DKEY-57L19 in linkage group 21, complete sequence Length = 193674 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 1969 cagggtatcccgatgatgcaaggagtgc 1942
>dbj|AK154857.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630109M11 product:solute carrier family 9 (sodium/hydrogen exchanger), member 1, full insert sequence Length = 4191 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 aggtagttggtgatcttctg 221 |||||||||||||||||||| Sbjct: 2872 aggtagttggtgatcttctg 2853
>ref|XM_692923.1| PREDICTED: Danio rerio similar to FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1 (LOC569529), partial mRNA Length = 3310 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 2334 cagggtatcccgatgatgcaaggagtgc 2361
>dbj|AK150135.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530135M05 product:solute carrier family 9 (sodium/hydrogen exchanger), member 1, full insert sequence Length = 4609 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 aggtagttggtgatcttctg 221 |||||||||||||||||||| Sbjct: 2838 aggtagttggtgatcttctg 2819
>dbj|AK162209.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420457F09 product:solute carrier family 9 (sodium/hydrogen exchanger), member 1, full insert sequence Length = 1624 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 aggtagttggtgatcttctg 221 |||||||||||||||||||| Sbjct: 166 aggtagttggtgatcttctg 147
>ref|XM_685041.1| PREDICTED: Danio rerio similar to zinc finger protein 251 (LOC561629), mRNA Length = 2475 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 1387 cagggtatcccgatgatgcaaggagtgc 1414
>emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in linkage group 17, complete sequence Length = 247607 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 166901 cagggtatcccgatgatgcaaggagtgc 166928
>emb|BX649307.12| Zebrafish DNA sequence from clone CH211-209P16 in linkage group 4, complete sequence Length = 164976 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 131776 cagggtatcccgatgatgcaaggagtgc 131749
>emb|BX465205.16| Zebrafish DNA sequence from clone CH211-197E7 in linkage group 23, complete sequence Length = 189019 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 40289 cagggtatcccgatgatgcaaggagtgc 40262
>gb|BC004687.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1, mRNA (cDNA clone IMAGE:3500839), partial cds Length = 1833 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 aggtagttggtgatcttctg 221 |||||||||||||||||||| Sbjct: 42 aggtagttggtgatcttctg 23
>emb|BX539341.8| Zebrafish DNA sequence from clone DKEY-3P4 in linkage group 22, complete sequence Length = 236484 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 52429 cagggtatcccgatgatgcaaggagtgc 52456
>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete sequence Length = 194306 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gaatctcccaggaggtagtt 209 |||||||||||||||||||| Sbjct: 94900 gaatctcccaggaggtagtt 94881
>emb|BX649341.3| Zebrafish DNA sequence from clone DKEY-199K11 in linkage group 22, complete sequence Length = 148057 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 146300 cagggtatcccgatgatgcaaggagtgc 146327
>emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in linkage group 22, complete sequence Length = 165445 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 158314 cagggtatcccgatgatgcaaggagtgc 158341
>emb|BX649620.5| Zebrafish DNA sequence from clone DKEY-11N14 in linkage group 20, complete sequence Length = 61794 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 61763 cagggtatcccgatgatgcaaggagtgc 61736
>emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in linkage group 20, complete sequence Length = 224173 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 109783 cagggtatcccgatgatgcaaggagtgc 109756
>ref|XM_311986.2| Anopheles gambiae str. PEST ENSANGP00000011100 (ENSANGG00000008611), partial mRNA Length = 1244 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 273 aagcagggtttccccatgaagcagggtgtgct 304
>dbj|AK108193.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C04, full insert sequence Length = 993 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 371 tggtgagcgcaggagaaagtccgtccgtggttgcat 406 ||||||||||| | | |||||||||||||| ||||| Sbjct: 317 tggtgagcgcaagcgcaagtccgtccgtggctgcat 352
>emb|BX842593.8| Zebrafish DNA sequence from clone DKEY-19K8 in linkage group 20, complete sequence Length = 127151 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 36741 cagggtatcccgatgatgcaaggagtgc 36714
>emb|BX510947.20| Zebrafish DNA sequence from clone DKEY-226F16 in linkage group 4, complete sequence Length = 125275 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 49088 cagggtatcccgatgatgcaaggagtgc 49115
>emb|CR854899.16| Zebrafish DNA sequence from clone CH211-268B14 in linkage group 14, complete sequence Length = 142230 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 cagggtttcccgatgaagcaaggagtgc 300 |||||| ||||||||| ||||||||||| Sbjct: 99595 cagggtatcccgatgatgcaaggagtgc 99622
>tpe|BN000162.1|AGA000162 TPA: TPA_inf: Anopheles gambiae str. PEST rpS6 gene for ribosomal protein S6 Length = 1988 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 270 aagcagggtttcccgatgaagcaaggagtgct 301 |||||||||||||| |||||||| || ||||| Sbjct: 766 aagcagggtttccccatgaagcagggtgtgct 797
>gb|M85299.1|RATNHEXI Rat sodium/hydrogen exchange protein-isoform 1 (NHE-1) mRNA, complete cds Length = 4581 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 aggtagttggtgatcttctg 221 |||||||||||||||||||| Sbjct: 2824 aggtagttggtgatcttctg 2805
>gb|U51112.1|MMU51112 Mus musculus Na+/H+ exchanger (NHE-1) mRNA, complete cds Length = 4126 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 aggtagttggtgatcttctg 221 |||||||||||||||||||| Sbjct: 2378 aggtagttggtgatcttctg 2359 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,601,825 Number of Sequences: 3902068 Number of extensions: 2601825 Number of successful extensions: 40401 Number of sequences better than 10.0: 153 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 40065 Number of HSP's gapped (non-prelim): 327 length of query: 453 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 431 effective length of database: 17,147,199,772 effective search space: 7390443101732 effective search space used: 7390443101732 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)