ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast40f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY596547.1| Saccharum officinarum clone SCAGLR1043G02, comple... 329 5e-87
2ref|XM_468370.1| Oryza sativa (japonica cultivar-group), mRNA 268 2e-68
3ref|XM_507547.1| PREDICTED Oryza sativa (japonica cultivar-group... 268 2e-68
4ref|XM_507041.2| PREDICTED Oryza sativa (japonica cultivar-group... 268 2e-68
5dbj|AK104442.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
6dbj|AK102943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
7dbj|AK060071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
8ref|XM_468180.1| Oryza sativa (japonica cultivar-group), mRNA 167 4e-38
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
10dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
11dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
12dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
14dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
15gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosom... 46 0.10
16ref|XM_550107.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.41
17gb|AE008747.1| Salmonella typhimurium LT2, section 51 of 220 of ... 44 0.41
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
19gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 44 0.41
20dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
21gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 44 0.41
22gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 44 0.41
23emb|AL627269.1| Salmonella enterica serovar Typhi (Salmonella ty... 44 0.41
24gb|DQ217769.1| Vaccinium uliginosum isolate YC 18S ribosomal RNA... 42 1.6
25gb|AC140554.3| Mus musculus BAC clone RP23-151C18 from chromosom... 42 1.6
26gb|AC130204.4| Mus musculus BAC clone RP24-427M16 from chromosom... 42 1.6
27gb|AF382743.1|AF382742S2 Vaccinium vitis-idaea internal transcri... 42 1.6
28gb|AF382730.1| Vaccinium macrocarpon internal transcribed spacer... 42 1.6
29gb|AC016699.10| Homo sapiens BAC clone RP11-173M4 from 2, comple... 42 1.6
30dbj|AK062714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
31ref|XM_482196.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
32ref|XM_482192.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
33ref|XM_476120.1| Oryza sativa (japonica cultivar-group), predic... 40 6.4
34ref|XM_467112.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
35ref|NM_196968.1| Oryza sativa (japonica cultivar-group) unknown ... 40 6.4
36ref|XM_613822.2| PREDICTED: Bos taurus coagulation factor X (F10... 40 6.4
37gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
38gb|AE009229.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 6.4
39emb|AL354709.15| Human DNA sequence from clone RP11-145E5 on chr... 40 6.4
40emb|AL136162.18| Human DNA sequence from clone RP11-560J1 on chr... 40 6.4
41emb|AL133412.7| Human DNA sequence from clone RP11-78H18 on chro... 40 6.4
42emb|AL035469.7|HS46B1 Human DNA sequence from clone RP1-46B1 on ... 40 6.4
43gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 6.4
44gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 6.4
45gb|BC104607.2| Bos taurus cDNA clone IMAGE:8121240, partial cds 40 6.4
46dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
47dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
48dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.4
49dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
50dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
51dbj|AP003563.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
52dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.4
53dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
54dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.4
55dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
56dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
57dbj|AK121929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
58dbj|AK109150.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
59dbj|AK072538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
60emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 40 6.4
61gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.4
62emb|X00673.1|BTCFXI Bovine mRNA for blood coagulation factor X 40 6.4 
>gb|AY596547.1| Saccharum officinarum clone SCAGLR1043G02, complete sequence
          Length = 984

 Score =  329 bits (166), Expect = 5e-87
 Identities = 273/309 (88%)
 Strand = Plus / Plus

                                                                       
Query: 144 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 203
           ||||||||||||||||| |||||||| |||| ||||| |||||||| |||||||||||||
Sbjct: 116 taatggcggaggaggggtacaaggtgacgctgaacgtgtacgacctcagcaacggcctcg 175

                                                                       
Query: 204 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 263
           |||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 cgcggcagctgtccacctccttcctcggcaagcccatcgaggccatctggcacacgggcg 235

                                                                       
Query: 264 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 323
           |||||||||||||||||||||||| |||||| |||||||||||| || |||| |||||| 
Sbjct: 236 tggtggtgtacgggaacgagtactacttcggcggcgggatccagtcgtcgcccgcgggga 295

                                                                       
Query: 324 cgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcacccacctcccccgcg 383
           |||||| |||||| |||||  |||||   || || ||| ||||||| ||| |||| ||||
Sbjct: 296 cgacgccgtacgggcgcccgctgcggacggtggagctgggcgtcacgcacatcccgcgcg 355

                                                                       
Query: 384 aggtcttcgaggactacctccgcgacatcgcgccgcgctacaccgncgccacatacagcc 443
           |||| ||||||||||||||||||||||||||||| || ||||| | ||  || ||| |||
Sbjct: 356 aggtgttcgaggactacctccgcgacatcgcgccccggtacacggccgagacctaccgcc 415

                    
Query: 444 tgctcaccc 452
           |||||||||
Sbjct: 416 tgctcaccc 424
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>ref|XM_468370.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1099

 Score =  268 bits (135), Expect = 2e-68
 Identities = 246/283 (86%)
 Strand = Plus / Plus

                                                                       
Query: 144 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 203
           ||||||||||||| ||| ||||||| |  || ||||| |||||||| |||||||||||||
Sbjct: 151 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 210

                                                                       
Query: 204 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 263
           |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 211 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 270

                                                                       
Query: 264 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 323
           ||||||||||||||||||||||||||||||| |||||||||||| ||  | |||||||| 
Sbjct: 271 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctggcggcgggga 330

                                                                       
Query: 324 cgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcacccacctcccccgcg 383
            ||||| |||||| || || |||||||| || ||  || |||  || ||| |||| || |
Sbjct: 331 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 390

                                                      
Query: 384 aggtcttcgaggactacctccgcgacatcgcgccgcgctacac 426
           |||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 391 aggtgttcgaggactacctccgcgacatctcgccgcggtacac 433
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>ref|XM_507547.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0053L11.37
           mRNA
          Length = 1151

 Score =  268 bits (135), Expect = 2e-68
 Identities = 246/283 (86%)
 Strand = Plus / Plus

                                                                       
Query: 144 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 203
           ||||||||||||| ||| ||||||| |  || ||||| |||||||| |||||||||||||
Sbjct: 129 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 188

                                                                       
Query: 204 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 263
           |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 189 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 248

                                                                       
Query: 264 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 323
           ||||||||||||||||||||||||||||||| |||||||||||| ||  | |||||||| 
Sbjct: 249 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctggcggcgggga 308

                                                                       
Query: 324 cgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcacccacctcccccgcg 383
            ||||| |||||| || || |||||||| || ||  || |||  || ||| |||| || |
Sbjct: 309 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 368

                                                      
Query: 384 aggtcttcgaggactacctccgcgacatcgcgccgcgctacac 426
           |||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 369 aggtgttcgaggactacctccgcgacatctcgccgcggtacac 411
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>ref|XM_507041.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0053L11.37
           mRNA
          Length = 1218

 Score =  268 bits (135), Expect = 2e-68
 Identities = 246/283 (86%)
 Strand = Plus / Plus

                                                                       
Query: 144 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 203
           ||||||||||||| ||| ||||||| |  || ||||| |||||||| |||||||||||||
Sbjct: 154 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 213

                                                                       
Query: 204 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 263
           |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 214 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 273

                                                                       
Query: 264 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 323
           ||||||||||||||||||||||||||||||| |||||||||||| ||  | |||||||| 
Sbjct: 274 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctggcggcgggga 333

                                                                       
Query: 324 cgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcacccacctcccccgcg 383
            ||||| |||||| || || |||||||| || ||  || |||  || ||| |||| || |
Sbjct: 334 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 393

                                                      
Query: 384 aggtcttcgaggactacctccgcgacatcgcgccgcgctacac 426
           |||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 394 aggtgttcgaggactacctccgcgacatctcgccgcggtacac 436
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>dbj|AK104442.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B11, full
           insert sequence
          Length = 1151

 Score =  268 bits (135), Expect = 2e-68
 Identities = 246/283 (86%)
 Strand = Plus / Plus

                                                                       
Query: 144 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 203
           ||||||||||||| ||| ||||||| |  || ||||| |||||||| |||||||||||||
Sbjct: 129 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 188

                                                                       
Query: 204 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 263
           |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 189 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 248

                                                                       
Query: 264 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 323
           ||||||||||||||||||||||||||||||| |||||||||||| ||  | |||||||| 
Sbjct: 249 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctggcggcgggga 308

                                                                       
Query: 324 cgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcacccacctcccccgcg 383
            ||||| |||||| || || |||||||| || ||  || |||  || ||| |||| || |
Sbjct: 309 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 368

                                                      
Query: 384 aggtcttcgaggactacctccgcgacatcgcgccgcgctacac 426
           |||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 369 aggtgttcgaggactacctccgcgacatctcgccgcggtacac 411
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>dbj|AK102943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114L12, full
           insert sequence
          Length = 1099

 Score =  268 bits (135), Expect = 2e-68
 Identities = 246/283 (86%)
 Strand = Plus / Plus

                                                                       
Query: 144 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 203
           ||||||||||||| ||| ||||||| |  || ||||| |||||||| |||||||||||||
Sbjct: 151 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 210

                                                                       
Query: 204 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 263
           |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 211 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 270

                                                                       
Query: 264 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 323
           ||||||||||||||||||||||||||||||| |||||||||||| ||  | |||||||| 
Sbjct: 271 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctggcggcgggga 330

                                                                       
Query: 324 cgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcacccacctcccccgcg 383
            ||||| |||||| || || |||||||| || ||  || |||  || ||| |||| || |
Sbjct: 331 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 390

                                                      
Query: 384 aggtcttcgaggactacctccgcgacatcgcgccgcgctacac 426
           |||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 391 aggtgttcgaggactacctccgcgacatctcgccgcggtacac 433
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>dbj|AK060071.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A06, full
           insert sequence
          Length = 1218

 Score =  268 bits (135), Expect = 2e-68
 Identities = 246/283 (86%)
 Strand = Plus / Plus

                                                                       
Query: 144 taatggcggaggaggggcacaaggtggcgctcaacgtctacgacctgagcaacggcctcg 203
           ||||||||||||| ||| ||||||| |  || ||||| |||||||| |||||||||||||
Sbjct: 154 taatggcggaggaagggtacaaggttgttcttaacgtgtacgacctcagcaacggcctcg 213

                                                                       
Query: 204 cgcgccagctctccacatccttcctcggcaagcccatcgaggccatctggcacacgggcg 263
           |||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 214 cgcggcagctctccacctccttcctcggcaagccaatcgaggccatctggcatacgggcg 273

                                                                       
Query: 264 tggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcggcgccggcggggg 323
           ||||||||||||||||||||||||||||||| |||||||||||| ||  | |||||||| 
Sbjct: 274 tggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgctggcggcgggga 333

                                                                       
Query: 324 cgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcacccacctcccccgcg 383
            ||||| |||||| || || |||||||| || ||  || |||  || ||| |||| || |
Sbjct: 334 ggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgcacatcccgcggg 393

                                                      
Query: 384 aggtcttcgaggactacctccgcgacatcgcgccgcgctacac 426
           |||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 394 aggtgttcgaggactacctccgcgacatctcgccgcggtacac 436
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>ref|XM_468180.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 228

 Score =  167 bits (84), Expect = 4e-38
 Identities = 120/132 (90%)
 Strand = Plus / Plus

                                                                       
Query: 176 aacgtctacgacctgagcaacggcctcgcgcgccagctctccacatccttcctcggcaag 235
           ||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||
Sbjct: 19  aacgtgtacgacctgagcaacagcctcgcgcggcagctctccacctccttcctccgcaag 78

                                                                       
Query: 236 cccatcgaggccatctggcacacgggcgtggtggtgtacgggaacgagtacttcttcggg 295
           || ||||||||||||||||| ||||||||| |||||||||||||| ||||||| | ||| 
Sbjct: 79  ccaatcgaggccatctggcatacgggcgtgctggtgtacgggaacaagtacttgtacggc 138

                       
Query: 296 ggcgggatccag 307
           ||||||||||||
Sbjct: 139 ggcgggatccag 150
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  141 bits (71), Expect = 2e-30
 Identities = 149/175 (85%)
 Strand = Plus / Minus

                                                                            
Query: 252      ggcacacgggcgtggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcgg 311
                |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| || 
Sbjct: 34899035 ggcatacgggcgtggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgc 34898976

                                                                            
Query: 312      cgccggcgggggcgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcaccc 371
                 | ||||||||  ||||| |||||| || || |||||||| || ||  || |||  || |
Sbjct: 34898975 tggcggcggggaggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgc 34898916

                                                                       
Query: 372      acctcccccgcgaggtcttcgaggactacctccgcgacatcgcgccgcgctacac 426
                || |||| || ||||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 34898915 acatcccgcgggaggtgttcgaggactacctccgcgacatctcgccgcggtacac 34898861



 Score =  115 bits (58), Expect = 1e-22
 Identities = 73/78 (93%)
 Strand = Plus / Minus

                                                                            
Query: 176      aacgtctacgacctgagcaacggcctcgcgcgccagctctccacatccttcctcggcaag 235
                ||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 34899199 aacgtgtacgacctcagcaacggcctcgcgcggcagctctccacctccttcctcggcaag 34899140

                                  
Query: 236      cccatcgaggccatctgg 253
                || |||||||||||||||
Sbjct: 34899139 ccaatcgaggccatctgg 34899122



 Score =  107 bits (54), Expect = 3e-20
 Identities = 72/78 (92%)
 Strand = Plus / Minus

                                                                            
Query: 176      aacgtctacgacctgagcaacggcctcgcgcgccagctctccacatccttcctcggcaag 235
                ||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||
Sbjct: 33509375 aacgtgtacgacctgagcaacagcctcgcgcggcagctctccacctccttcctccgcaag 33509316

                                  
Query: 236      cccatcgaggccatctgg 253
                || |||||||||||||||
Sbjct: 33509315 ccaatcgaggccatctgg 33509298



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 124/154 (80%)
 Strand = Plus / Minus

                                                                            
Query: 252      ggcacacgggcgtggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcgg 311
                |||| ||||||||| |||||||||||||| ||||||| | ||| |||||||||||| || 
Sbjct: 33509204 ggcatacgggcgtgctggtgtacgggaacaagtacttgtacggcggcgggatccagtcgc 33509145

                                                                            
Query: 312      cgccggcgggggcgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcaccc 371
                 ||||| ||||  ||| | |||||| || || |||||||| || || | | |||| || |
Sbjct: 33509144 tgccggtggggaggacaccgtacgggcggccggtgcgggtggtggagccgggcgtgacgc 33509085

                                                  
Query: 372      acctcccccgcgaggtcttcgaggactacctccg 405
                || |||| ||  |||| |||||||||| ||||||
Sbjct: 33509084 acatcccacgttaggtgttcgaggacttcctccg 33509051



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 172      gctcaacgtctacgacctga 191
                ||||||||||||||||||||
Sbjct: 26490224 gctcaacgtctacgacctga 26490243



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 79       cggcgtcgtcttcttctcca 98
                ||||||||||||||||||||
Sbjct: 21606638 cggcgtcgtcttcttctcca 21606657
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>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0053L11
          Length = 147123

 Score =  141 bits (71), Expect = 2e-30
 Identities = 149/175 (85%)
 Strand = Plus / Minus

                                                                          
Query: 252    ggcacacgggcgtggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcgg 311
              |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| || 
Sbjct: 120630 ggcatacgggcgtggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgc 120571

                                                                          
Query: 312    cgccggcgggggcgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcaccc 371
               | ||||||||  ||||| |||||| || || |||||||| || ||  || |||  || |
Sbjct: 120570 tggcggcggggaggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgc 120511

                                                                     
Query: 372    acctcccccgcgaggtcttcgaggactacctccgcgacatcgcgccgcgctacac 426
              || |||| || ||||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 120510 acatcccgcgggaggtgttcgaggactacctccgcgacatctcgccgcggtacac 120456



 Score =  115 bits (58), Expect = 1e-22
 Identities = 73/78 (93%)
 Strand = Plus / Minus

                                                                          
Query: 176    aacgtctacgacctgagcaacggcctcgcgcgccagctctccacatccttcctcggcaag 235
              ||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 120794 aacgtgtacgacctcagcaacggcctcgcgcggcagctctccacctccttcctcggcaag 120735

                                
Query: 236    cccatcgaggccatctgg 253
              || |||||||||||||||
Sbjct: 120734 ccaatcgaggccatctgg 120717
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>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_E04
          Length = 118192

 Score =  141 bits (71), Expect = 2e-30
 Identities = 149/175 (85%)
 Strand = Plus / Minus

                                                                         
Query: 252   ggcacacgggcgtggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcgg 311
             |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| || 
Sbjct: 58532 ggcatacgggcgtggtggtgtacgggaacgagtacttcttcggcggcgggatccagtcgc 58473

                                                                         
Query: 312   cgccggcgggggcgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcaccc 371
              | ||||||||  ||||| |||||| || || |||||||| || ||  || |||  || |
Sbjct: 58472 tggcggcggggaggacgccgtacgggcggccggtgcgggtggtggagatgggcgagacgc 58413

                                                                    
Query: 372   acctcccccgcgaggtcttcgaggactacctccgcgacatcgcgccgcgctacac 426
             || |||| || ||||| |||||||||||||||||||||||| ||||||| |||||
Sbjct: 58412 acatcccgcgggaggtgttcgaggactacctccgcgacatctcgccgcggtacac 58358



 Score =  115 bits (58), Expect = 1e-22
 Identities = 73/78 (93%)
 Strand = Plus / Minus

                                                                         
Query: 176   aacgtctacgacctgagcaacggcctcgcgcgccagctctccacatccttcctcggcaag 235
             ||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 58696 aacgtgtacgacctcagcaacggcctcgcgcggcagctctccacctccttcctcggcaag 58637

                               
Query: 236   cccatcgaggccatctgg 253
             || |||||||||||||||
Sbjct: 58636 ccaatcgaggccatctgg 58619
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>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0054K20
          Length = 153584

 Score =  107 bits (54), Expect = 3e-20
 Identities = 72/78 (92%)
 Strand = Plus / Minus

                                                                         
Query: 176   aacgtctacgacctgagcaacggcctcgcgcgccagctctccacatccttcctcggcaag 235
             ||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||
Sbjct: 84250 aacgtgtacgacctgagcaacagcctcgcgcggcagctctccacctccttcctccgcaag 84191

                               
Query: 236   cccatcgaggccatctgg 253
             || |||||||||||||||
Sbjct: 84190 ccaatcgaggccatctgg 84173



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 124/154 (80%)
 Strand = Plus / Minus

                                                                         
Query: 252   ggcacacgggcgtggtggtgtacgggaacgagtacttcttcgggggcgggatccaggcgg 311
             |||| ||||||||| |||||||||||||| ||||||| | ||| |||||||||||| || 
Sbjct: 84079 ggcatacgggcgtgctggtgtacgggaacaagtacttgtacggcggcgggatccagtcgc 84020

                                                                         
Query: 312   cgccggcgggggcgacgcagtacggccgccccgtgcgggtcgtcgacctgagcgtcaccc 371
              ||||| ||||  ||| | |||||| || || |||||||| || || | | |||| || |
Sbjct: 84019 tgccggtggggaggacaccgtacgggcggccggtgcgggtggtggagccgggcgtgacgc 83960

                                               
Query: 372   acctcccccgcgaggtcttcgaggactacctccg 405
             || |||| ||  |||| |||||||||| ||||||
Sbjct: 83959 acatcccacgttaggtgttcgaggacttcctccg 83926
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 63       cgttcctttccggcggcggcgtcgtcttc 91
                ||||||| |||||||||||||||||||||
Sbjct: 25939795 cgttcctctccggcggcggcgtcgtcttc 25939767
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>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017B12
          Length = 157424

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 63    cgttcctttccggcggcggcgtcgtcttc 91
             ||||||| |||||||||||||||||||||
Sbjct: 94893 cgttcctctccggcggcggcgtcgtcttc 94865
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>gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosome 17, complete
             sequence
          Length = 217187

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 443   ctgctcaccccacactgcacacttcac 469
             ||||||||| |||||||||||||||||
Sbjct: 73089 ctgctcaccacacactgcacacttcac 73115
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>ref|XM_550107.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 891

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 72  ccggcggcggcgtcgtcttcttctcc 97
           ||||||||||| ||||||||||||||
Sbjct: 748 ccggcggcggcatcgtcttcttctcc 723
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>gb|AE008747.1| Salmonella typhimurium LT2, section 51 of 220 of the complete genome
          Length = 23306

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 22   cctcccagatccgcgcgcgcgt 43
            ||||||||||||||||||||||
Sbjct: 2759 cctcccagatccgcgcgcgcgt 2738
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 72      ccggcggcggcgtcgtcttcttctcc 97
               ||||||||||| ||||||||||||||
Sbjct: 2400088 ccggcggcggcatcgtcttcttctcc 2400113



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 68       ctttccggcggcggcgtcgt 87
                ||||||||||||||||||||
Sbjct: 18500886 ctttccggcggcggcgtcgt 18500867
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 22      cctcccagatccgcgcgcgcgt 43
               ||||||||||||||||||||||
Sbjct: 1826559 cctcccagatccgcgcgcgcgt 1826580
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>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0024G09
          Length = 175565

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 72     ccggcggcggcgtcgtcttcttctcc 97
              ||||||||||| ||||||||||||||
Sbjct: 129138 ccggcggcggcatcgtcttcttctcc 129163
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 22      cctcccagatccgcgcgcgcgt 43
               ||||||||||||||||||||||
Sbjct: 1900013 cctcccagatccgcgcgcgcgt 1900034
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 22      cctcccagatccgcgcgcgcgt 43
               ||||||||||||||||||||||
Sbjct: 1152378 cctcccagatccgcgcgcgcgt 1152357
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>emb|AL627269.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 5/20
          Length = 254050

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 22    cctcccagatccgcgcgcgcgt 43
             ||||||||||||||||||||||
Sbjct: 27800 cctcccagatccgcgcgcgcgt 27779
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>gb|DQ217769.1| Vaccinium uliginosum isolate YC 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 761

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 363 gcgtcacccacctcccccgcg 383
           |||||||||||||||||||||
Sbjct: 479 gcgtcacccacctcccccgcg 499
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>gb|AC140554.3| Mus musculus BAC clone RP23-151C18 from chromosome 18, complete
             sequence
          Length = 215716

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 448   caccccacactgcacacttca 468
             |||||||||||||||||||||
Sbjct: 24534 caccccacactgcacacttca 24554
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>gb|AC130204.4| Mus musculus BAC clone RP24-427M16 from chromosome 18, complete
             sequence
          Length = 167394

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 448   caccccacactgcacacttca 468
             |||||||||||||||||||||
Sbjct: 83044 caccccacactgcacacttca 83064
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>gb|AF382743.1|AF382742S2 Vaccinium vitis-idaea internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 454

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 363 gcgtcacccacctcccccgcg 383
           |||||||||||||||||||||
Sbjct: 230 gcgtcacccacctcccccgcg 250
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>gb|AF382730.1| Vaccinium macrocarpon internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence
          Length = 644

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 363 gcgtcacccacctcccccgcg 383
           |||||||||||||||||||||
Sbjct: 420 gcgtcacccacctcccccgcg 440
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>gb|AC016699.10| Homo sapiens BAC clone RP11-173M4 from 2, complete sequence
          Length = 54480

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 384  aggtcttcgaggactacctccgcgacatc 412
            |||| ||||||||||||||||||| ||||
Sbjct: 6923 aggttttcgaggactacctccgcgccatc 6895
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>dbj|AK062714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-C06, full
           insert sequence
          Length = 534

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 70  ttccggcggcggcgtcgtcttcttctcca 98
           |||||||||||||||||||| || |||||
Sbjct: 277 ttccggcggcggcgtcgtctcctcctcca 305
to top
>ref|XM_482196.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1146

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   ttccggcggcggcgtcgtct 89
            ||||||||||||||||||||
Sbjct: 1109 ttccggcggcggcgtcgtct 1128
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>ref|XM_482192.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1125

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   ttccggcggcggcgtcgtct 89
            ||||||||||||||||||||
Sbjct: 1088 ttccggcggcggcgtcgtct 1107
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>ref|XM_476120.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 675

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  cggcggcggcgtcgtcttct 92
           ||||||||||||||||||||
Sbjct: 664 cggcggcggcgtcgtcttct 645
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>ref|XM_467112.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1106

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 gctcaacgtctacgacctga 191
           ||||||||||||||||||||
Sbjct: 99  gctcaacgtctacgacctga 118
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>ref|NM_196968.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBb0094K03.5), mRNA
          Length = 1201

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                       
Query: 225 tcctcggcaagcccatcgaggccatctggcacacgggcgtggtggtgtacgggaacgagt 284
           |||| |||||| | || ||||| || ||||| || || ||||| || |||||||| ||||
Sbjct: 305 tccttggcaaggctattgaggcaatttggcatacaggggtggtagtctacgggaaggagt 364

                           
Query: 285 acttcttcgggggcgg 300
           ||||||| || |||||
Sbjct: 365 acttctttggcggcgg 380
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>ref|XM_613822.2| PREDICTED: Bos taurus coagulation factor X (F10), mRNA
          Length = 1796

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 cccgcgaggtcttcgaggac 397
           ||||||||||||||||||||
Sbjct: 479 cccgcgaggtcttcgaggac 498
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>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12,
             complete sequence
          Length = 172647

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    cggcggcggcgtcgtcttct 92
             ||||||||||||||||||||
Sbjct: 98147 cggcggcggcgtcgtcttct 98128
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>gb|AE009229.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 255
            of 256 of the complete sequence
          Length = 12291

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  gggcacaaggtggcgctcaa 177
            ||||||||||||||||||||
Sbjct: 4806 gggcacaaggtggcgctcaa 4825
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>emb|AL354709.15| Human DNA sequence from clone RP11-145E5 on chromosome 9 Contains the
             5' end of the CDKN2B gene for cyclin-dependent kinase
             inhibitor 2B (p15, inhibits CDK4), a ubiquitin A-52
             residue ribosomal protein fusion product 1 (UBA52) (RPL40)
             pseudogene, the 3' end of a variant of the MTAP gene for
             methylthioadenosine phosphorylase (MSAP), a novel gene and
             a CpG island, complete sequence
          Length = 157533

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   cagctctccacatccttcct 228
             ||||||||||||||||||||
Sbjct: 59195 cagctctccacatccttcct 59176
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>emb|AL136162.18| Human DNA sequence from clone RP11-560J1 on chromosome 6 Contains the
             5' end of the JMJ gene for jumonji protein, a novel gene
             and one CpG island, complete sequence
          Length = 129135

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   cacacgggcgtggtggtgta 273
             ||||||||||||||||||||
Sbjct: 92473 cacacgggcgtggtggtgta 92492
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>emb|AL133412.7| Human DNA sequence from clone RP11-78H18 on chromosome 9q22.1-22.33
             Contains the 5' end of the TNFSF15 gene for tumor necrosis
             factor (ligand) superfamily, member 15 (TL1, VEG1), a PRP4
             pre-mRNA processing factor 4 homolog B (PR4H, Prp4, PRP4H,
             PRP4K, KIAA0536) (PRPF4B) pseudogene and the TNFSF8 gene
             for tumor necrosis factor (ligand) superfamily, member 8
             (CD153, CD30L, CD30LG), complete sequence
          Length = 158717

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   ggaggaggggcacaaggtgg 170
             ||||||||||||||||||||
Sbjct: 22375 ggaggaggggcacaaggtgg 22394
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>emb|AL035469.7|HS46B1 Human DNA sequence from clone RP1-46B1 on chromosome 6q12, complete
             sequence
          Length = 158204

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   gccagctctccacatccttc 226
             ||||||||||||||||||||
Sbjct: 65169 gccagctctccacatccttc 65188
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>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    gcgtcgtcttcttctccaag 100
             ||||||||||||||||||||
Sbjct: 84152 gcgtcgtcttcttctccaag 84171
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 158     gggcacaaggtggcgctcaa 177
               ||||||||||||||||||||
Sbjct: 2824640 gggcacaaggtggcgctcaa 2824659
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>gb|BC104607.2| Bos taurus cDNA clone IMAGE:8121240, partial cds
          Length = 1529

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 cccgcgaggtcttcgaggac 397
           ||||||||||||||||||||
Sbjct: 173 cccgcgaggtcttcgaggac 192
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 70       ttccggcggcggcgtcgtct 89
                ||||||||||||||||||||
Sbjct: 18535256 ttccggcggcggcgtcgtct 18535237



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 70       ttccggcggcggcgtcgtct 89
                ||||||||||||||||||||
Sbjct: 18501801 ttccggcggcggcgtcgtct 18501782
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      cggcggcggcgtcgtcttct 92
               ||||||||||||||||||||
Sbjct: 6267792 cggcggcggcgtcgtcttct 6267773
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 195     acggcctcgcgcgccagctc 214
               ||||||||||||||||||||
Sbjct: 4273762 acggcctcgcgcgccagctc 4273743
to top
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020D05
          Length = 158760

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    cggcgtcgtcttcttctcca 98
             ||||||||||||||||||||
Sbjct: 95588 cggcgtcgtcttcttctcca 95607
to top
>dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1003B09
          Length = 155263

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     ctttccggcggcggcgtcgt 87
              ||||||||||||||||||||
Sbjct: 124644 ctttccggcggcggcgtcgt 124625
to top
>dbj|AP003563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1168H06
          Length = 185600

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     ctttccggcggcggcgtcgt 87
              ||||||||||||||||||||
Sbjct: 100103 ctttccggcggcggcgtcgt 100084
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 328     gcagtacggccgccccgtgcgggt 351
               ||||||||||| ||||||||||||
Sbjct: 1035854 gcagtacggcctccccgtgcgggt 1035877
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>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1003_B06
          Length = 131956

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gctcaacgtctacgacctga 191
             ||||||||||||||||||||
Sbjct: 90140 gctcaacgtctacgacctga 90159
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 196     cggcctcgcgcgccagctct 215
               ||||||||||||||||||||
Sbjct: 1089304 cggcctcgcgcgccagctct 1089285
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>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0519E06
          Length = 170634

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gctcaacgtctacgacctga 191
             ||||||||||||||||||||
Sbjct: 32605 gctcaacgtctacgacctga 32624
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>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0671F11
          Length = 159409

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     ttccggcggcggcgtcgtct 89
              ||||||||||||||||||||
Sbjct: 117279 ttccggcggcggcgtcgtct 117260



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    ttccggcggcggcgtcgtct 89
             ||||||||||||||||||||
Sbjct: 83824 ttccggcggcggcgtcgtct 83805
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>dbj|AK121929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106J23, full
           insert sequence
          Length = 1063

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                       
Query: 225 tcctcggcaagcccatcgaggccatctggcacacgggcgtggtggtgtacgggaacgagt 284
           |||| |||||| | || ||||| || ||||| || || ||||| || |||||||| ||||
Sbjct: 167 tccttggcaaggctattgaggcaatttggcatacaggggtggtagtctacgggaaggagt 226

                           
Query: 285 acttcttcgggggcgg 300
           ||||||| || |||||
Sbjct: 227 acttctttggcggcgg 242
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>dbj|AK109150.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F09, full
           insert sequence
          Length = 949

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  cggcggcggcgtcgtcttct 92
           ||||||||||||||||||||
Sbjct: 713 cggcggcggcgtcgtcttct 694
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>dbj|AK072538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132B16, full
           insert sequence
          Length = 1106

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 gctcaacgtctacgacctga 191
           ||||||||||||||||||||
Sbjct: 99  gctcaacgtctacgacctga 118
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    gctcaacgtctacgacctga 191
              ||||||||||||||||||||
Sbjct: 195888 gctcaacgtctacgacctga 195907
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 328    gcagtacggccgccccgtgcgggt 351
              ||||||||||| ||||||||||||
Sbjct: 708831 gcagtacggcctccccgtgcgggt 708854
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>emb|X00673.1|BTCFXI Bovine mRNA for blood coagulation factor X
          Length = 1537

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 cccgcgaggtcttcgaggac 397
           ||||||||||||||||||||
Sbjct: 275 cccgcgaggtcttcgaggac 294


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,696,531
Number of Sequences: 3902068
Number of extensions: 3696531
Number of successful extensions: 102011
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100602
Number of HSP's gapped (non-prelim): 1399
length of query: 472
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 450
effective length of database: 17,147,199,772
effective search space: 7716239897400
effective search space used: 7716239897400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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