ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast40e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_196667.1| Oryza sativa (japonica cultivar-group) putative... 149 1e-32
2dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
3gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) ch... 149 1e-32
4dbj|AK105017.2| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
5dbj|AK071270.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
6dbj|AK061419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
8gb|AE005053.1| Halobacterium sp. NRC-1 section 84 of 170 of the ... 46 0.10
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.41
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
11gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.41
12gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 42 1.6
13emb|AL831761.9| Mouse DNA sequence from clone RP23-318H16 on chr... 42 1.6
14ref|XM_366892.1| Magnaporthe grisea 70-15 chromosome VII predict... 40 6.4
15gb|AC163033.4| Mus musculus BAC clone RP23-432F6 from chromosome... 40 6.4
16ref|XM_753011.1| Ustilago maydis 521 hypothetical protein (UM019... 40 6.4
17gb|AC122471.4| Mus musculus BAC clone RP24-322M5 from chromosome... 40 6.4
18gb|AC016898.6| Homo sapiens BAC clone RP11-68D19 from 7, complet... 40 6.4
19gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 6.4
20gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, co... 40 6.4
21emb|AL031658.11|HS310O13 Human DNA sequence from clone RP1-310O1... 40 6.4
22emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 6.4
23dbj|AK220551.1| Mus musculus mRNA for mKIAA4219 protein 40 6.4
24ref|NM_013675.3| Mus musculus spectrin beta 1 (Spnb1), mRNA 40 6.4
25gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.4
26dbj|AK147299.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 6.4
27dbj|AK147704.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 40 6.4
28dbj|AK147684.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 40 6.4
29dbj|AK052321.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 6.4
30dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
31gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
32gb|AF139177.1|AF139177 Streptomyces lividans aerial mycelium for... 40 6.4
33dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
34dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.4
35gb|AC114771.3| Homo sapiens BAC clone RP11-425I13 from 4, comple... 40 6.4
36dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.4
37gb|AC008786.6|AC008786 Homo sapiens chromosome 5 clone CTD-2037L... 40 6.4
38dbj|AK110865.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
39gb|AC011662.1|AC011662 Drosophila melanogaster, chromosome 2L, r... 40 6.4
40gb|AE003657.3| Drosophila melanogaster chromosome 2L, section 66... 40 6.4
41gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.4
42gb|U00089.2| Mycoplasma pneumoniae M129, complete genome 40 6.4
43gb|AC132482.4| Mus musculus BAC clone RP23-27C11 from 12, comple... 40 6.4
44emb|AL732309.9| Mouse DNA sequence from clone RP23-132N23 on chr... 40 6.4
45gb|U03771.1|SCU03771 Streptomyces coelicolor A3(2) aerial myceli... 40 6.4 
>ref|NM_196667.1| Oryza sativa (japonica cultivar-group) putative lycosylation
           enzyme-like protein (OSJNBb0040I11.3), mRNA
          Length = 1341

 Score =  149 bits (75), Expect = 1e-32
 Identities = 106/115 (92%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctacccggtgtcgttcgcgtacctcatctccgcgtcgacgggggacgcggagcgagcggc 420
           |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||
Sbjct: 180 ctacccggtgtcgttcgcgtacctcatctcggcgtcgacgggcgacgcggcgcgggcggc 239

                                                                  
Query: 421 gaggctgctggcggcactgtaccacccggcc-acagctacctgctgcacctggac 474
           | ||||||||||||| ||||||||||||||| || |||||||||| |||||||||
Sbjct: 240 gcggctgctggcggcgctgtaccacccggccaactgctacctgctccacctggac 294



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 213 gcagggaggtggcgatctccgccgtcttcactgcgctcctcgtcgtctccatcctctttc 272
           |||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||  |
Sbjct: 20  gcagggaggtggtggtctccggcgtcttcaccgcgctcctcgtcctctccatcctctccc 79

                               
Query: 273 tcccttggatcctcctcacc 292
           |||| | | |||||||||||
Sbjct: 80  tcccgtcgctcctcctcacc 99
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  149 bits (75), Expect = 1e-32
 Identities = 106/115 (92%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                            
Query: 361      ctacccggtgtcgttcgcgtacctcatctccgcgtcgacgggggacgcggagcgagcggc 420
                |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||
Sbjct: 15107590 ctacccggtgtcgttcgcgtacctcatctcggcgtcgacgggcgacgcggcgcgggcggc 15107649

                                                                       
Query: 421      gaggctgctggcggcactgtaccacccggcc-acagctacctgctgcacctggac 474
                | ||||||||||||| ||||||||||||||| || |||||||||| |||||||||
Sbjct: 15107650 gcggctgctggcggcgctgtaccacccggccaactgctacctgctccacctggac 15107704



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                            
Query: 213      gcagggaggtggcgatctccgccgtcttcactgcgctcctcgtcgtctccatcctctttc 272
                |||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||  |
Sbjct: 15107430 gcagggaggtggtggtctccggcgtcttcaccgcgctcctcgtcctctccatcctctccc 15107489

                                    
Query: 273      tcccttggatcctcctcacc 292
                |||| | | |||||||||||
Sbjct: 15107490 tcccgtcgctcctcctcacc 15107509
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>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11,
             complete sequence
          Length = 129420

 Score =  149 bits (75), Expect = 1e-32
 Identities = 106/115 (92%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                         
Query: 361   ctacccggtgtcgttcgcgtacctcatctccgcgtcgacgggggacgcggagcgagcggc 420
             |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||
Sbjct: 16203 ctacccggtgtcgttcgcgtacctcatctcggcgtcgacgggcgacgcggcgcgggcggc 16262

                                                                    
Query: 421   gaggctgctggcggcactgtaccacccggcc-acagctacctgctgcacctggac 474
             | ||||||||||||| ||||||||||||||| || |||||||||| |||||||||
Sbjct: 16263 gcggctgctggcggcgctgtaccacccggccaactgctacctgctccacctggac 16317



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                         
Query: 213   gcagggaggtggcgatctccgccgtcttcactgcgctcctcgtcgtctccatcctctttc 272
             |||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||  |
Sbjct: 16043 gcagggaggtggtggtctccggcgtcttcaccgcgctcctcgtcctctccatcctctccc 16102

                                 
Query: 273   tcccttggatcctcctcacc 292
             |||| | | |||||||||||
Sbjct: 16103 tcccgtcgctcctcctcacc 16122
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>dbj|AK105017.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-G02, full
           insert sequence
          Length = 1713

 Score =  149 bits (75), Expect = 1e-32
 Identities = 106/115 (92%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctacccggtgtcgttcgcgtacctcatctccgcgtcgacgggggacgcggagcgagcggc 420
           |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||
Sbjct: 400 ctacccggtgtcgttcgcgtacctcatctcggcgtcgacgggcgacgcggcgcgggcggc 459

                                                                  
Query: 421 gaggctgctggcggcactgtaccacccggcc-acagctacctgctgcacctggac 474
           | ||||||||||||| ||||||||||||||| || |||||||||| |||||||||
Sbjct: 460 gcggctgctggcggcgctgtaccacccggccaactgctacctgctccacctggac 514



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 213 gcagggaggtggcgatctccgccgtcttcactgcgctcctcgtcgtctccatcctctttc 272
           |||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||  |
Sbjct: 240 gcagggaggtggtggtctccggcgtcttcaccgcgctcctcgtcctctccatcctctccc 299

                               
Query: 273 tcccttggatcctcctcacc 292
           |||| | | |||||||||||
Sbjct: 300 tcccgtcgctcctcctcacc 319
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>dbj|AK071270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087N08, full
           insert sequence
          Length = 1719

 Score =  149 bits (75), Expect = 1e-32
 Identities = 106/115 (92%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctacccggtgtcgttcgcgtacctcatctccgcgtcgacgggggacgcggagcgagcggc 420
           |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||
Sbjct: 401 ctacccggtgtcgttcgcgtacctcatctcggcgtcgacgggcgacgcggcgcgggcggc 460

                                                                  
Query: 421 gaggctgctggcggcactgtaccacccggcc-acagctacctgctgcacctggac 474
           | ||||||||||||| ||||||||||||||| || |||||||||| |||||||||
Sbjct: 461 gcggctgctggcggcgctgtaccacccggccaactgctacctgctccacctggac 515



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 213 gcagggaggtggcgatctccgccgtcttcactgcgctcctcgtcgtctccatcctctttc 272
           |||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||  |
Sbjct: 241 gcagggaggtggtggtctccggcgtcttcaccgcgctcctcgtcctctccatcctctccc 300

                               
Query: 273 tcccttggatcctcctcacc 292
           |||| | | |||||||||||
Sbjct: 301 tcccgtcgctcctcctcacc 320
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>dbj|AK061419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-F02, full
           insert sequence
          Length = 1704

 Score =  149 bits (75), Expect = 1e-32
 Identities = 106/115 (92%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                       
Query: 361 ctacccggtgtcgttcgcgtacctcatctccgcgtcgacgggggacgcggagcgagcggc 420
           |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||
Sbjct: 402 ctacccggtgtcgttcgcgtacctcatctcggcgtcgacgggcgacgcggcgcgggcggc 461

                                                                  
Query: 421 gaggctgctggcggcactgtaccacccggcc-acagctacctgctgcacctggac 474
           | ||||||||||||| ||||||||||||||| || |||||||||| |||||||||
Sbjct: 462 gcggctgctggcggcgctgtaccacccggccaactgctacctgctccacctggac 516



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 213 gcagggaggtggcgatctccgccgtcttcactgcgctcctcgtcgtctccatcctctttc 272
           |||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||  |
Sbjct: 242 gcagggaggtggtggtctccggcgtcttcaccgcgctcctcgtcctctccatcctctccc 301

                               
Query: 273 tcccttggatcctcctcacc 292
           |||| | | |||||||||||
Sbjct: 302 tcccgtcgctcctcctcacc 321
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  149 bits (75), Expect = 1e-32
 Identities = 106/115 (92%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                            
Query: 361      ctacccggtgtcgttcgcgtacctcatctccgcgtcgacgggggacgcggagcgagcggc 420
                |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||
Sbjct: 15115831 ctacccggtgtcgttcgcgtacctcatctcggcgtcgacgggcgacgcggcgcgggcggc 15115890

                                                                       
Query: 421      gaggctgctggcggcactgtaccacccggcc-acagctacctgctgcacctggac 474
                | ||||||||||||| ||||||||||||||| || |||||||||| |||||||||
Sbjct: 15115891 gcggctgctggcggcgctgtaccacccggccaactgctacctgctccacctggac 15115945



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                            
Query: 213      gcagggaggtggcgatctccgccgtcttcactgcgctcctcgtcgtctccatcctctttc 272
                |||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||  |
Sbjct: 15115671 gcagggaggtggtggtctccggcgtcttcaccgcgctcctcgtcctctccatcctctccc 15115730

                                    
Query: 273      tcccttggatcctcctcacc 292
                |||| | | |||||||||||
Sbjct: 15115731 tcccgtcgctcctcctcacc 15115750
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>gb|AE005053.1| Halobacterium sp. NRC-1 section 84 of 170 of the complete genome
          Length = 11842

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 391  cgcgtcgacgggggacgcggagc 413
            |||||||||||||||||||||||
Sbjct: 5185 cgcgtcgacgggggacgcggagc 5207
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 416      gcggcgaggctgctggcggcac 437
                ||||||||||||||||||||||
Sbjct: 13285415 gcggcgaggctgctggcggcac 13285436



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     cgcggcggccaaggacggcg 356
               ||||||||||||||||||||
Sbjct: 8302022 cgcggcggccaaggacggcg 8302003
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 416      gcggcgaggctgctggcggcac 437
                ||||||||||||||||||||||
Sbjct: 13282190 gcggcgaggctgctggcggcac 13282211



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     cgcggcggccaaggacggcg 356
               ||||||||||||||||||||
Sbjct: 8299857 cgcggcggccaaggacggcg 8299838
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>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07,
             from chromosome 3, complete sequence
          Length = 149539

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 416   gcggcgaggctgctggcggcac 437
             ||||||||||||||||||||||
Sbjct: 34426 gcggcgaggctgctggcggcac 34405
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 245     gcgctcctcgtcgtctccatc 265
               |||||||||||||||||||||
Sbjct: 2907575 gcgctcctcgtcgtctccatc 2907555
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>emb|AL831761.9| Mouse DNA sequence from clone RP23-318H16 on chromosome 4, complete
             sequence
          Length = 179556

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    agatctcagggcagggggaag 63
             |||||||||||||||||||||
Sbjct: 86370 agatctcagggcagggggaag 86350
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>ref|XM_366892.1| Magnaporthe grisea 70-15 chromosome VII predicted protein
           (MG02968.4) partial mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 402 gggacgcggagcgagcggcg 421
           ||||||||||||||||||||
Sbjct: 535 gggacgcggagcgagcggcg 516
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>gb|AC163033.4| Mus musculus BAC clone RP23-432F6 from chromosome 12, complete sequence
          Length = 201510

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 265    cctctttctcccttggatcctcct 288
              |||||||||||||| |||||||||
Sbjct: 186067 cctctttctccctttgatcctcct 186044
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>ref|XM_753011.1| Ustilago maydis 521 hypothetical protein (UM01957.1) partial mRNA
          Length = 1782

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 cttcactgcgctcctcgtcg 257
           ||||||||||||||||||||
Sbjct: 15  cttcactgcgctcctcgtcg 34
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>gb|AC122471.4| Mus musculus BAC clone RP24-322M5 from chromosome 2, complete sequence
          Length = 206592

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     gatctcagggcagggggaag 63
              ||||||||||||||||||||
Sbjct: 139642 gatctcagggcagggggaag 139661
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>gb|AC016898.6| Homo sapiens BAC clone RP11-68D19 from 7, complete sequence
          Length = 81117

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   tctccatcctctttctccct 277
             ||||||||||||||||||||
Sbjct: 33027 tctccatcctctttctccct 33008
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   tcctctttctcccttggatc 283
             ||||||||||||||||||||
Sbjct: 82783 tcctctttctcccttggatc 82764
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>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence
          Length = 208207

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    gatctcagggcagggggaag 63
             ||||||||||||||||||||
Sbjct: 85050 gatctcagggcagggggaag 85031
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>emb|AL031658.11|HS310O13 Human DNA sequence from clone RP1-310O13 on chromosome 20q11.2 Contains
              the 3' end of the C20orf125 gene, the C20orf126 gene, the
              C20orf159 gene, the C20orf160 gene, a novel gene and four
              CpG islands, complete sequence
          Length = 162976

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 34     ggaattactagatctcagggcagg 57
              |||||||||||||| |||||||||
Sbjct: 145694 ggaattactagatcacagggcagg 145717
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    tgcgcggcggcagggaggtg 223
              ||||||||||||||||||||
Sbjct: 253742 tgcgcggcggcagggaggtg 253761
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>dbj|AK220551.1| Mus musculus mRNA for mKIAA4219 protein
          Length = 5494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  cctctttctcccttggatcctcct 288
            |||||||||||||| |||||||||
Sbjct: 3429 cctctttctccctttgatcctcct 3452
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>ref|NM_013675.3| Mus musculus spectrin beta 1 (Spnb1), mRNA
          Length = 10417

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  cctctttctcccttggatcctcct 288
            |||||||||||||| |||||||||
Sbjct: 8329 cctctttctccctttgatcctcct 8352
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 340     ggcggccaaggacggcggcggcta 363
               ||||||||||| ||||||||||||
Sbjct: 3208569 ggcggccaaggccggcggcggcta 3208546
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>dbj|AK147299.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1010G02 product:spectrin beta 1, full insert
            sequence
          Length = 10395

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  cctctttctcccttggatcctcct 288
            |||||||||||||| |||||||||
Sbjct: 8330 cctctttctccctttgatcctcct 8353
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>dbj|AK147704.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
            full-length enriched library, clone:M5C1110G22
            product:spectrin beta 1, full insert sequence
          Length = 9987

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  cctctttctcccttggatcctcct 288
            |||||||||||||| |||||||||
Sbjct: 7922 cctctttctccctttgatcctcct 7945
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>dbj|AK147684.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
            full-length enriched library, clone:M5C1107M20
            product:spectrin beta 1, full insert sequence
          Length = 9987

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  cctctttctcccttggatcctcct 288
            |||||||||||||| |||||||||
Sbjct: 7922 cctctttctccctttgatcctcct 7945
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>dbj|AK052321.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330027P03 product:SPECTRIN BETA CHAIN,
           ERYTHROCYTE (BETA-I SPECTRIN) homolog [Homo sapiens],
           full insert sequence
          Length = 2964

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 265 cctctttctcccttggatcctcct 288
           |||||||||||||| |||||||||
Sbjct: 900 cctctttctccctttgatcctcct 923
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 181      gatgaggattcgggggctgc 200
                ||||||||||||||||||||
Sbjct: 30682995 gatgaggattcgggggctgc 30683014
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>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11,
             complete sequence
          Length = 126040

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   cgcggcggccaaggacggcg 356
             ||||||||||||||||||||
Sbjct: 39278 cgcggcggccaaggacggcg 39259
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>gb|AF139177.1|AF139177 Streptomyces lividans aerial mycelium formation gene cluster; RamS
            (ramS), putative ATP binding membrane translocator
            (ramA), putative ATP binding membrane translocator
            (ramB), and putative two component response regulator
            (ramR) genes, complete cds
          Length = 6062

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  tgcgcggcggcagggaggtg 223
            ||||||||||||||||||||
Sbjct: 2200 tgcgcggcggcagggaggtg 2219
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>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1060H01
          Length = 157987

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    gatgaggattcgggggctgc 200
              ||||||||||||||||||||
Sbjct: 125272 gatgaggattcgggggctgc 125291
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 364     cccggtgtcgttcgcgtacc 383
               ||||||||||||||||||||
Sbjct: 7865763 cccggtgtcgttcgcgtacc 7865744
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>gb|AC114771.3| Homo sapiens BAC clone RP11-425I13 from 4, complete sequence
          Length = 121946

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   tctccatcctctttctccct 277
             ||||||||||||||||||||
Sbjct: 46611 tctccatcctctttctccct 46630
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 340     ggcggccaaggacggcggcggcta 363
               ||||||||||| ||||||||||||
Sbjct: 2240879 ggcggccaaggccggcggcggcta 2240902
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>gb|AC008786.6|AC008786 Homo sapiens chromosome 5 clone CTD-2037L6, complete sequence
          Length = 177472

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    gggcagggggaagagaacag 70
             ||||||||||||||||||||
Sbjct: 75806 gggcagggggaagagaacag 75825
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>dbj|AK110865.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-D12, full
           insert sequence
          Length = 1385

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 cgcggcggccaaggacggcg 356
           ||||||||||||||||||||
Sbjct: 484 cgcggcggccaaggacggcg 465
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>gb|AC011662.1|AC011662 Drosophila melanogaster, chromosome 2L, region 36D-, BAC clones BACR01G10
              and BACR05I08, complete sequence
          Length = 294942

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aaagaaacttggccagattg 128
              ||||||||||||||||||||
Sbjct: 197854 aaagaaacttggccagattg 197835
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>gb|AE003657.3| Drosophila melanogaster chromosome 2L, section 66 of 83 of the complete
              sequence
          Length = 265254

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    aaagaaacttggccagattg 128
              ||||||||||||||||||||
Sbjct: 109236 aaagaaacttggccagattg 109217
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    acggcggcggctacccggtg 370
              ||||||||||||||||||||
Sbjct: 374368 acggcggcggctacccggtg 374349
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>gb|U00089.2| Mycoplasma pneumoniae M129, complete genome
          Length = 816394

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     tttactttcactcaacaacg 106
              ||||||||||||||||||||
Sbjct: 672903 tttactttcactcaacaacg 672884
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>gb|AC132482.4| Mus musculus BAC clone RP23-27C11 from 12, complete sequence
          Length = 175487

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 265    cctctttctcccttggatcctcct 288
              |||||||||||||| |||||||||
Sbjct: 143014 cctctttctccctttgatcctcct 143037
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>emb|AL732309.9| Mouse DNA sequence from clone RP23-132N23 on chromosome 2, complete
             sequence
          Length = 221859

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    gatctcagggcagggggaag 63
             ||||||||||||||||||||
Sbjct: 20715 gatctcagggcagggggaag 20696
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>gb|U03771.1|SCU03771 Streptomyces coelicolor A3(2) aerial mycelium formation  gene cluster
            (ramA, ramB, and ramR) genes, complete cds
          Length = 6630

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  tgcgcggcggcagggaggtg 223
            ||||||||||||||||||||
Sbjct: 2200 tgcgcggcggcagggaggtg 2219


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,285,177
Number of Sequences: 3902068
Number of extensions: 3285177
Number of successful extensions: 66846
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66065
Number of HSP's gapped (non-prelim): 781
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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