ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast40e09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PKN2_MYXXA (P54736) Serine/threonine-protein kinase pkn2 (EC 2.7... 29 3.2
2CD2L2_HUMAN (Q9UQ88) PITSLRE serine/threonine-protein kinase CDC... 29 3.2
3CD2L1_MOUSE (P24788) PITSLRE serine/threonine-protein kinase CDC... 29 3.2
4CD2L1_HUMAN (P21127) PITSLRE serine/threonine-protein kinase CDC... 29 3.2
5FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor 28 7.0

>PKN2_MYXXA (P54736) Serine/threonine-protein kinase pkn2 (EC 2.7.11.1)|
          Length = 830

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 37  PEREAVTIEHGGQHSSGAMERATPVRSPHTSTA 135
           P+  + T   G   SSG+   A P  SPHT TA
Sbjct: 337 PQASSGTAAFGVASSSGSASGALPAASPHTGTA 369



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>CD2L2_HUMAN (Q9UQ88) PITSLRE serine/threonine-protein kinase CDC2L2 (EC|
           2.7.11.22) (Galactosyltransferase-associated protein
           kinase p58/GTA) (Cell division cycle 2-like protein
           kinase 2) (CDK11)
          Length = 780

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 265 DAEDLSNSERRLMSGSKMKEMTGSGIFAEKSENSDSE 375
           D +D+S+SER+  S       +GSG   E+ E  + E
Sbjct: 266 DLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEE 302



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>CD2L1_MOUSE (P24788) PITSLRE serine/threonine-protein kinase CDC2L1 (EC|
           2.7.11.22) (Galactosyltransferase-associated protein
           kinase p58/GTA) (Cell division cycle 2-like protein
           kinase 1)
          Length = 784

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 265 DAEDLSNSERRLMSGSKMKEMTGSGIFAEKSENSDSE 375
           D +D+S+SER+  S       +GSG   E+ E  + E
Sbjct: 265 DLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEE 301



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>CD2L1_HUMAN (P21127) PITSLRE serine/threonine-protein kinase CDC2L1 (EC|
           2.7.11.22) (Galactosyltransferase-associated protein
           kinase p58/GTA) (Cell division cycle 2-like protein
           kinase 1) (CLK-1) (CDK11) (p58 CLK-1)
          Length = 795

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 265 DAEDLSNSERRLMSGSKMKEMTGSGIFAEKSENSDSE 375
           D +D+S+SER+  S       +GSG   E+ E  + E
Sbjct: 278 DLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEE 314



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>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor|
          Length = 4010

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 122 CGLRTGVALSIAPELCCPPCS 60
           C    G  L IAP  CCP C+
Sbjct: 67  CAFEKGEVLWIAPNQCCPQCA 87


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.305    0.122    0.338 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,895,864
Number of Sequences: 219361
Number of extensions: 541108
Number of successful extensions: 896
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
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