| Clone Name | bast40e06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Y5621_ARATH (O81488) PHD finger protein At5g26210 | 158 | 7e-39 | 2 | CAN12_MOUSE (Q9ER56) Calpain-12 (EC 3.4.22.-) | 29 | 5.1 | 3 | CG21_CANAL (P47829) G2/mitotic-specific cyclin CYB1 | 29 | 5.1 | 4 | B3GT3_RAT (Q6AY39) Beta-1,3-galactosyltransferase 3 (EC 2.4.1.79... | 28 | 8.7 | 5 | CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate... | 28 | 8.7 |
|---|
>Y5621_ARATH (O81488) PHD finger protein At5g26210| Length = 255 Score = 158 bits (399), Expect = 7e-39 Identities = 76/106 (71%), Positives = 84/106 (79%) Frame = +1 Query: 145 AGGAYVARTAEEVFRDLRGRRAGMIKALTEDVDKFFKLCDPEKENLCLYGYPNETWEVTL 324 AGGAY RT EEVFRD +GRRAGMIKALT DV +FF+LCDPEKENLCLYG+PNE WEV L Sbjct: 3 AGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNL 62 Query: 325 XXXXXXXXXXXXXLGINFARDGMNEKDWLALVAVHSDSWLLSVAFY 462 LGINFARDGM EKDWL+LVAVHSD+WLL+VAF+ Sbjct: 63 PAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFF 108
>CAN12_MOUSE (Q9ER56) Calpain-12 (EC 3.4.22.-)| Length = 720 Score = 29.3 bits (64), Expect = 5.1 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -2 Query: 357 FRDLWGHFLSWQGHF 313 F++LWGH +SWQ F Sbjct: 616 FQELWGHLMSWQATF 630
>CG21_CANAL (P47829) G2/mitotic-specific cyclin CYB1| Length = 492 Score = 29.3 bits (64), Expect = 5.1 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -3 Query: 275 SFSGSQSLKNLSTSSVRALIMPARRPRRSRKTSSAVRATYAPPAPAPSMGGRRQ 114 S S S + N + + +L +P+R P++ + T S+ P P +G R Q Sbjct: 122 SSSNSSNNNNNDANRLASLAVPSRLPQKRQATESSTNLVEKLRVPQPEVGERSQ 175
>B3GT3_RAT (Q6AY39) Beta-1,3-galactosyltransferase 3 (EC 2.4.1.79)| (Beta-1,3-GalTase 3) (Beta3Gal-T3) (b3Gal-T3) (Galactosylgalactosylglucosylceramide beta-D-acetyl-galactosaminyltransferase) (UDP-N-acetylgalactosamine:globotriaosylceramide beta-1,3-N-ace Length = 331 Score = 28.5 bits (62), Expect = 8.7 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = -2 Query: 426 NCN*RQP--ILLIHSIPSEVDS*CWFRDLWGHFLSWQGH 316 NC+ + P ++L+ S PS+V + R WG +W GH Sbjct: 72 NCSQQNPFLVILVTSRPSDVKARQAIRVTWGEKKTWWGH 110
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 28.5 bits (62), Expect = 8.7 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -3 Query: 275 SFSGSQSLKNLSTSSVRALIMPARRPRRSRKTSSAV--------RATYAPPAP 141 SF + SLK STSS R+ ++ AR S +SS+ +A PAP Sbjct: 13 SFVNASSLKKSSTSSARSGVLSARFTCNSSSSSSSATPPSLIRNEPVFAAPAP 65 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,082,002 Number of Sequences: 219361 Number of extensions: 753121 Number of successful extensions: 2556 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2490 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2552 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)