ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast40e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TAL1_MOUSE (P22091) T-cell acute lymphocytic leukemia-1 protein ... 30 3.0
2FBXL6_HUMAN (Q8N531) F-box/LRR-repeat protein 6 (F-box and leuci... 28 8.8

>TAL1_MOUSE (P22091) T-cell acute lymphocytic leukemia-1 protein homolog (TAL-1|
           protein) (Stem cell protein)
          Length = 329

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 257 RDQESAARPRRVS*TEVARL-GPAPAPEPDVAPGE 156
           RD  +A    RV  TE+ R  GPAPAP P  AP E
Sbjct: 77  RDAVAAEARLRVPTTELCRPPGPAPAPAPASAPAE 111



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>FBXL6_HUMAN (Q8N531) F-box/LRR-repeat protein 6 (F-box and leucine-rich repeat|
           protein 6) (F-box protein FBL6) (FBL6A)
          Length = 539

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -2

Query: 293 RSTARRLSPNAARDQESAARPRRVS*TEVARLGPAPAPEPDVAPGE 156
           R  +RR      R   +AA+P+    +E A   PAPAP P   P E
Sbjct: 61  RRASRRTPRQPPRGPSAAAKPKAGLRSEAAA-APAPAPAPTPTPEE 105


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,234,634
Number of Sequences: 219361
Number of extensions: 409849
Number of successful extensions: 1773
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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