>PWP2_SCHPO (Q9C1X1) Periodic tryptophan protein 2 homolog|
          Length = 854

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +1

Query: 337 SKKDWLXIMSSPLGLVLIWDSFLWMSFQILQRKYTHW*FMQKLHH 471
           S  DW+ I SS LG +L+W+   W S   + ++ +H+  +  L +
Sbjct: 306 STGDWIAIGSSKLGQLLVWE---WQSESYVLKQQSHYDALSTLQY 347

>RP28_BPSP1 (P03048) RNA polymerase sigma GP28 factor|
          Length = 220

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 336 FQKGLAXNYVQPSGSGIDLGFFSLDELSNPSEEV 437
           F+K L     Q  G+G  LGF ++D+  NP E +
Sbjct: 81  FRKSLFRKVKQSGGTGRALGFVAIDDEDNPLENM 114


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,510,124
Number of Sequences: 219361
Number of extensions: 1140503
Number of successful extensions: 3675
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3675
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)