ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast40d11 |
|---|---|
| Clone Library Name | barley_pub |
>PSB1_ORYSA (O64464) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S| proteasome alpha subunit F) (20S proteasome subunit beta-6) Length = 221 Score = 262 bits (670), Expect = 3e-70 Identities = 123/130 (94%), Positives = 128/130 (98%) Frame = +2 Query: 89 MSRRGDWVYENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSG 268 MSRRGDWVYENNGGTCVAIAGADYCVVAADTRLSVGYNILTR+HSKICELADKC +ASSG Sbjct: 1 MSRRGDWVYENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSG 60 Query: 269 FQGDIKALQRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSE 448 FQGDIKAL +NLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSE Sbjct: 61 FQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSE 120 Query: 449 GKGCVYSYDA 478 GKGCV++YDA Sbjct: 121 GKGCVFTYDA 130
>PSB1_PETHY (O82531) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S| proteasome alpha subunit F) (20S proteasome subunit beta-6) Length = 223 Score = 220 bits (561), Expect = 1e-57 Identities = 99/122 (81%), Positives = 116/122 (95%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKAL 292 Y+NNGGTCVA+AGADYCV+AADTR+S GYNILTR++SKI +LADKCV+ASSGFQ D++AL Sbjct: 11 YDNNGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQADVRAL 70 Query: 293 QRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 472 Q+ LA+R L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLDSEGKGCV++Y Sbjct: 71 QKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTY 130 Query: 473 DA 478 DA Sbjct: 131 DA 132
>PSB1_ARATH (P42742) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| subunit beta type 6) (20S proteasome beta subunit F-1) (TAS-G39.20) (TAS-F22/FAFP98) (Proteasome component C5) Length = 223 Score = 209 bits (531), Expect = 4e-54 Identities = 94/122 (77%), Positives = 114/122 (93%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKAL 292 Y+NNGGTCVAIAG+DYCV+AADTR+S GY+IL+R++SKI +LAD+ V++SSGFQ D+KAL Sbjct: 11 YDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKAL 70 Query: 293 QRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 472 Q+ L +R L+YQHQHNK+MSCPAMAQLLSNTLY+KRFFPYYAFNVLGGLD EGKGCV++Y Sbjct: 71 QKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTY 130 Query: 473 DA 478 DA Sbjct: 131 DA 132
>PSB1_MOUSE (O09061) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| component C5) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome gamma chain) Length = 240 Score = 136 bits (342), Expect = 3e-32 Identities = 65/121 (53%), Positives = 86/121 (71%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKAL 292 Y NGGT +AIAG D+ +VA+DTRLS G++I TR+ K +L DK VI SGF GD L Sbjct: 32 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 91 Query: 293 QRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 472 + + AR +Y+H +NK M+ A+A +LS LY +RFFPYY +N++GGLD EGKG VYS+ Sbjct: 92 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 151 Query: 473 D 475 D Sbjct: 152 D 152
>PSB1_HUMAN (P20618) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| component C5) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome gamma chain) Length = 241 Score = 136 bits (342), Expect = 3e-32 Identities = 65/121 (53%), Positives = 86/121 (71%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKAL 292 Y NGGT +AIAG D+ +VA+DTRLS G++I TR+ K +L DK VI SGF GD L Sbjct: 33 YVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92 Query: 293 QRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 472 + + AR +Y+H +NK M+ A+A +LS LY +RFFPYY +N++GGLD EGKG VYS+ Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152 Query: 473 D 475 D Sbjct: 153 D 153
>PSB1_RAT (P18421) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| component C5) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome gamma chain) Length = 240 Score = 133 bits (334), Expect = 3e-31 Identities = 64/121 (52%), Positives = 85/121 (70%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKAL 292 Y NGGT +AIAG D+ +VA+DTRLS G++I TR+ K +L DK VI SGF GD L Sbjct: 32 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 91 Query: 293 QRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 472 + + AR +Y+H +NK M+ A+A +LS LY +RFFPYY +N++ GLD EGKG VYS+ Sbjct: 92 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSF 151 Query: 473 D 475 D Sbjct: 152 D 152
>PSB12_CARAU (Q9IB83) Proteasome subunit beta type 1-B (EC 3.4.25.1) (20S| proteasome beta 6 subunit B) (B6-B) Length = 237 Score = 131 bits (330), Expect = 8e-31 Identities = 62/121 (51%), Positives = 85/121 (70%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKAL 292 Y NGGT +A+AG D+ +VA+DTRLS GY+I +R+ K +L D VI SGF GD L Sbjct: 29 YAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTL 88 Query: 293 QRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 472 + + AR +Y+H +NK M+ A+A +LS LY +RFFPYY +N++GGLD EG+G VYS+ Sbjct: 89 TKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSF 148 Query: 473 D 475 D Sbjct: 149 D 149
>PSB11_CARAU (Q9IB84) Proteasome subunit beta type 1-A (EC 3.4.25.1) (20S| proteasome beta 6 subunit A) (B6-A) Length = 238 Score = 131 bits (330), Expect = 8e-31 Identities = 62/121 (51%), Positives = 85/121 (70%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKAL 292 Y NGGT +A+AG D+ +VA+DTRLS GY+I +R+ K +L D VI SGF GD L Sbjct: 30 YAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTL 89 Query: 293 QRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 472 + + AR +Y+H +NK M+ A+A +LS LY +RFFPYY +N++GGLD EG+G VYS+ Sbjct: 90 TKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSF 149 Query: 473 D 475 D Sbjct: 150 D 150
>PSB1_DROME (P40304) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| 26 kDa subunit) Length = 235 Score = 129 bits (324), Expect = 4e-30 Identities = 62/121 (51%), Positives = 86/121 (71%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKAL 292 YE+NGG+ VAIAG D+ V+AADTRLS GYNI +R SK+ +L+ + V+ S+G D +L Sbjct: 25 YESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSL 84 Query: 293 QRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 472 ++ R Y+H H + M+ A+AQ+LS +Y +RFFPYY N+L G+D+EGKG VYSY Sbjct: 85 TGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSY 144 Query: 473 D 475 D Sbjct: 145 D 145
>PSB1_SCHPO (Q9UQY2) Probable proteasome subunit beta type 1 (EC 3.4.25.1)| Length = 225 Score = 113 bits (282), Expect = 3e-25 Identities = 55/121 (45%), Positives = 75/121 (61%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKAL 292 Y NGGT VAIAG + ++A DTR GYNI TR ++ E+ D VI +SGF+ D AL Sbjct: 9 YVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALAL 68 Query: 293 QRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 472 + + R LY H ++MS + A ++ LY KRFFPYY + + G+D EGKG +YS+ Sbjct: 69 VKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSF 128 Query: 473 D 475 D Sbjct: 129 D 129
>PSB1_CAEEL (P34286) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| subunit beta 6) Length = 258 Score = 107 bits (267), Expect = 2e-23 Identities = 54/122 (44%), Positives = 77/122 (63%), Gaps = 1/122 (0%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVG-YNILTREHSKICELADKCVIASSGFQGDIKA 289 Y GG+ AI+G ++ +VA+DTR++ NILTR+ KI L D ++ +SGF GD+ Sbjct: 47 YSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQ 106 Query: 290 LQRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYS 469 L++ L +R Y+ + MS A+LLS LYY+RFFPYY +L G+D GKG V+S Sbjct: 107 LKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFS 166 Query: 470 YD 475 YD Sbjct: 167 YD 168
>PSB1_TRYBB (Q9U794) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S| proteasome beta 6 subunit) Length = 258 Score = 106 bits (264), Expect = 4e-23 Identities = 58/123 (47%), Positives = 81/123 (65%), Gaps = 2/123 (1%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTR-EHSKICELADKCVIASSGFQGDIKA 289 Y +NGGT AIAG++Y V+ ADTRL+ + I TR + SK+ +L D+ +ASSG Q D Sbjct: 48 YTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQ 107 Query: 290 LQRNLAARELLYQHQHNKRM-SCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVY 466 LQ+ L R YQ+ + ++ S A+A+L S LY +RFFPYY FN++ G+D +G G Y Sbjct: 108 LQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCY 167 Query: 467 SYD 475 SYD Sbjct: 168 SYD 170
>PSB1_YEAST (P23724) Proteasome component C5 (EC 3.4.25.1) (Multicatalytic| endopeptidase complex subunit C5) Length = 241 Score = 100 bits (248), Expect = 3e-21 Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 1/122 (0%) Frame = +2 Query: 113 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKAL 292 Y +NGGT + IAG D+ V+A DTR Y+I +R K+ + D V++++GF D AL Sbjct: 24 YGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDAL 83 Query: 293 QRNLAARELLYQHQHN-KRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYS 469 + Y HN K++S + A+ + + LY KRFFPYY ++ GLD +GKG VYS Sbjct: 84 VKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYS 143 Query: 470 YD 475 +D Sbjct: 144 FD 145
>PSB3_SCHPO (Q9Y7T8) Probable proteasome subunit beta type 3 (EC 3.4.25.1)| Length = 204 Score = 79.0 bits (193), Expect = 6e-15 Identities = 39/123 (31%), Positives = 68/123 (55%) Frame = +2 Query: 110 VYENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKA 289 + E NGG+CVA+AG + +A+D RL V LT K+ + DK + +G D++ Sbjct: 3 IMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDVQT 62 Query: 290 LQRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYS 469 L + LY+ + +++ A L+S+TLY KRF PY++F V+ G+ ++ + Sbjct: 63 LYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFICG 122 Query: 470 YDA 478 +D+ Sbjct: 123 FDS 125
>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 76.6 bits (187), Expect = 3e-14 Identities = 49/117 (41%), Positives = 66/117 (56%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 G T V I D V+AAD R S+G I R +KI ++ + IA +G GDI L R L Sbjct: 10 GTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSYD 475 A LY Q KRMS A+A LL+N + ++FPY A+ ++GG D + K +YS D Sbjct: 70 RAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEKPK--LYSVD 124
>PSB3_PICMA (O65084) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit beta-3) Length = 204 Score = 74.3 bits (181), Expect = 1e-13 Identities = 39/123 (31%), Positives = 63/123 (51%) Frame = +2 Query: 110 VYENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKA 289 ++E NG VA+ G + +A+D RL V + + +I ++ DK + SG D++ Sbjct: 3 IFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDVQT 62 Query: 290 LQRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYS 469 L + A R LYQ + + M A L+S LY KRF PY+ V+ GL + K + + Sbjct: 63 LYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFICT 122 Query: 470 YDA 478 D+ Sbjct: 123 MDS 125
>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 73.2 bits (178), Expect = 3e-13 Identities = 47/117 (40%), Positives = 65/117 (55%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 G T V I +D V+AAD R S+G + + +KI ++ + IA +G GDI L R L Sbjct: 10 GTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSYD 475 A LY Q KRMS A+A LL+N L R PY A+ ++GG D + + +YS D Sbjct: 70 RAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEKPR--LYSVD 124
>PSB3_GIALA (Q9N9W8) Proteasome subunit beta type 3 (EC 3.4.25.1)| Length = 207 Score = 72.4 bits (176), Expect = 6e-13 Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 1/116 (0%) Frame = +2 Query: 110 VYENNGGTCVAIAGADYCVVAADTRLSVGYNILT-REHSKICELADKCVIASSGFQGDIK 286 ++E NG + I G D +AAD RL Y LT +I L+ C++ +G Q D+ Sbjct: 4 IWEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVL 63 Query: 287 ALQRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGK 454 R + + LY Q ++ + A A+++S+ LY RF PY+ ++ G +++GK Sbjct: 64 TTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGK 119
>PSB3A_ARATH (Q9XI05) Proteasome subunit beta type 3-A (EC 3.4.25.1) (20S| proteasome beta subunit C-1) (Proteasome component T) Length = 204 Score = 72.0 bits (175), Expect = 7e-13 Identities = 39/123 (31%), Positives = 62/123 (50%) Frame = +2 Query: 110 VYENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKA 289 ++E NG VA+ G + +A+D RL V + + +I ++ D+ I SG D++ Sbjct: 3 IFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQT 62 Query: 290 LQRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYS 469 L + L R LYQ + + M A L+S LY KRF PY V+ GL + K + + Sbjct: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFICT 122 Query: 470 YDA 478 D+ Sbjct: 123 MDS 125
>PSB3_ORYSA (Q9LST7) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit beta-3) Length = 204 Score = 70.5 bits (171), Expect = 2e-12 Identities = 38/122 (31%), Positives = 61/122 (50%) Frame = +2 Query: 110 VYENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKA 289 ++E NG VA+ G + +A+D RL V + + ++ ++ DK I SG D + Sbjct: 3 IFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQT 62 Query: 290 LQRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYS 469 L + L R LYQ + + M A L+S LY KRF PY+ V+ GL + + + + Sbjct: 63 LYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFICT 122 Query: 470 YD 475 D Sbjct: 123 MD 124
>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 213 Score = 70.1 bits (170), Expect = 3e-12 Identities = 40/117 (34%), Positives = 66/117 (56%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 G T V + D V+A + R ++G I ++ KI ++AD+ + ++G GD + L R + Sbjct: 11 GTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARII 70 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSYD 475 LY+ + ++ + A+A L SN L R+FPY ++GG+DSEGK +YS D Sbjct: 71 KIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSID 126
>PSB3B_ARATH (O81153) Proteasome subunit beta type 3-B (EC 3.4.25.1) (20S| proteasome beta subunit C-2) Length = 204 Score = 69.7 bits (169), Expect = 4e-12 Identities = 38/123 (30%), Positives = 61/123 (49%) Frame = +2 Query: 110 VYENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKA 289 ++E NG VA+ G + +A+D RL V + + +I ++ D I SG D++ Sbjct: 3 IFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQT 62 Query: 290 LQRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYS 469 L + L R LYQ + + M A L+S LY KRF P+ V+ GL + K + + Sbjct: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICT 122 Query: 470 YDA 478 D+ Sbjct: 123 MDS 125
>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 206 Score = 67.8 bits (164), Expect = 1e-11 Identities = 41/108 (37%), Positives = 60/108 (55%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 G T V + + V+AADTR S+G I + +KI ++ + IA +G GDI L R L Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSE 448 A LY+ K MS A+A LL+N L ++FPY + ++GG D + Sbjct: 70 KAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEK 117
>PSB3_CAEEL (Q23237) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| subunit beta 3) Length = 204 Score = 67.8 bits (164), Expect = 1e-11 Identities = 32/117 (27%), Positives = 61/117 (52%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 GGT VA+AG + +A+D R+ + + K+ ++ DK + +GFQ D + + + Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSYD 475 R+ LY+ + N+ + +++++SN Y RF Y+ ++ GLD K + D Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMD 124
>PSB3_RAT (P40112) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) Length = 205 Score = 67.4 bits (163), Expect = 2e-11 Identities = 34/111 (30%), Positives = 59/111 (53%) Frame = +2 Query: 110 VYENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKA 289 V NGG +A+ G + +AAD R + ++T + KI + D+ I +G D++ Sbjct: 3 VMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQT 62 Query: 290 LQRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 442 + + L R LY+ + +++ + +++N LY KRF PYY V+ GLD Sbjct: 63 VAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLD 113
>PSB3_ONCMY (O73817) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) Length = 205 Score = 67.0 bits (162), Expect = 2e-11 Identities = 34/107 (31%), Positives = 56/107 (52%) Frame = +2 Query: 122 NGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRN 301 NGG +A+ G +AAD R V ++T + KI + D+ I +G D++ + + Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66 Query: 302 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 442 L R LY+ + +++ ++SN LY +RF PYY V+ GLD Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 113
>PSB3_MOUSE (Q9R1P1) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) Length = 205 Score = 67.0 bits (162), Expect = 2e-11 Identities = 33/107 (30%), Positives = 58/107 (54%) Frame = +2 Query: 122 NGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRN 301 NGG +A+ G + +AAD R + ++T + KI + D+ I +G D++ + + Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66 Query: 302 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 442 L R LY+ + +++ + +++N LY KRF PYY V+ GLD Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLD 113
>PSB3_HUMAN (P49720) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) Length = 205 Score = 67.0 bits (162), Expect = 2e-11 Identities = 33/107 (30%), Positives = 58/107 (54%) Frame = +2 Query: 122 NGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRN 301 NGG +A+ G + +AAD R + ++T + KI + D+ I +G D++ + + Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66 Query: 302 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 442 L R LY+ + +++ + +++N LY KRF PYY V+ GLD Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLD 113
>PSB3_DROME (Q9XYN7) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S| proteasome subunit beta-3) Length = 205 Score = 63.2 bits (152), Expect = 3e-10 Identities = 32/107 (29%), Positives = 55/107 (51%) Frame = +2 Query: 122 NGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRN 301 NGG VA+ G D +A D R + ++ + K+ + + + +G Q DI ++ Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDR 66 Query: 302 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 442 L R+ LY+ + N+ M + ++S+ LY RF PY+ V+ GLD Sbjct: 67 LMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLD 113
>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 62.8 bits (151), Expect = 4e-10 Identities = 34/118 (28%), Positives = 65/118 (55%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 G T V + D V+A++ R ++G+ I ++ K+ ++ D + ++G GD + L R + Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLV 68 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSYDA 478 + LY+ + ++ M+ + L+SN L R++P ++GG+D G G +YS DA Sbjct: 69 SVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPG-IYSLDA 125
>PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 61.6 bits (148), Expect = 1e-09 Identities = 37/117 (31%), Positives = 61/117 (52%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 G T V I D V A + R S+G I + KI ++ + +G D ++L + L Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYL 68 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSYD 475 A LY+ ++++++S A A L +N L+ RF+P+ +LGG+D G +YS D Sbjct: 69 KAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENG-AKIYSLD 124
>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 224 Score = 59.3 bits (142), Expect = 5e-09 Identities = 36/117 (30%), Positives = 59/117 (50%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 G T V + D ++A D R S+G + +E K+ ++ D + +G GD +A+ R L Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSYD 475 A LY+ + + + A A LLSN L+ R FP+ ++GG D ++S D Sbjct: 66 IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLD 122
>PSB3_TRYBB (Q9NDA1) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S| proteasome subunit beta-3) Length = 205 Score = 56.6 bits (135), Expect = 3e-08 Identities = 31/107 (28%), Positives = 59/107 (55%) Frame = +2 Query: 122 NGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRN 301 +GG+C+A+AG + VV +D RL ++ E K+ + D V+ +G + D + + Sbjct: 7 SGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQQTFAQK 66 Query: 302 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 442 + R +Y+ + + ++ A A L+S+ LY RF P++ V+G +D Sbjct: 67 VNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTID 113
>PSB3_BOVIN (P33672) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) (Fragment) Length = 192 Score = 54.7 bits (130), Expect = 1e-07 Identities = 29/98 (29%), Positives = 48/98 (48%) Frame = +2 Query: 149 GADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNLAARELLYQ 328 G + +AAD R + ++T + KI + D+ I +G D++ + + L R LY+ Sbjct: 3 GKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYE 62 Query: 329 HQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 442 + +++N LY KRF PYY V+ GLD Sbjct: 63 LKEGXXXXXXXXXCMVANLLYEKRFGPYYTEPVIAGLD 100
>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 211 Score = 52.4 bits (124), Expect = 6e-07 Identities = 35/118 (29%), Positives = 59/118 (50%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 G T V I D ++A + R+++ I+ + K+ ++ + +G GD + L R + Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYM 67 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSYDA 478 A LY+ Q M A+A LLSN L ++ PY ++GG+D+ V+S DA Sbjct: 68 KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPH--VFSIDA 123
>PSB3_YEAST (P25451) Proteasome component PUP3 (EC 3.4.25.1) (Macropain subunit| PUP3) (Multicatalytic endopeptidase complex subunit PUP3) Length = 205 Score = 51.6 bits (122), Expect = 1e-06 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 1/119 (0%) Frame = +2 Query: 122 NGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRN 301 NGG VA+ G D +A D RL ++ + KI + +G D+ L Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGH-VFLGITGLATDVTTLNEM 66 Query: 302 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSE-GKGCVYSYD 475 + LY+ + + + QL+S++LY +RF PY+ V+ G++S+ GK + +D Sbjct: 67 FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFD 125
>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-2) (Proteasome epsilon-2 chain) Length = 273 Score = 49.3 bits (116), Expect = 5e-06 Identities = 33/114 (28%), Positives = 55/114 (48%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 G T +A + +VAAD+R S+G I ++ KI E+ + +G D + RNL Sbjct: 57 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 116 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVY 466 + L++ + +R+S ++LL+N LY R ++ G D G G Y Sbjct: 117 GIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYY 170
>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-1) (Proteasome epsilon-1 chain) (Proteasome component E) Length = 274 Score = 48.9 bits (115), Expect = 7e-06 Identities = 34/121 (28%), Positives = 56/121 (46%) Frame = +2 Query: 104 DWVYENNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDI 283 D + G T +A +VAAD+R S+G I ++ KI E+ + +G D Sbjct: 50 DMLKHAKGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADC 109 Query: 284 KALQRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCV 463 + RNL + L++ + +R+S ++LL+N LY R ++ G D G G Sbjct: 110 QFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLY 169 Query: 464 Y 466 Y Sbjct: 170 Y 170
>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (20S proteasome subunit E) (Proteasome epsilon chain) Length = 272 Score = 48.1 bits (113), Expect = 1e-05 Identities = 33/114 (28%), Positives = 54/114 (47%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 G T +A +VAAD+R S+G I ++ KI E+ + +G D + RNL Sbjct: 55 GTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 114 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVY 466 + L++ + +R+S ++LL+N LY R ++ G D G G Y Sbjct: 115 GIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYY 168
>PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 209 Score = 45.8 bits (107), Expect = 6e-05 Identities = 30/115 (26%), Positives = 56/115 (48%) Frame = +2 Query: 122 NGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRN 301 +G T +A +VAAD+R + G I ++ K+ E+ + +G D +R Sbjct: 3 HGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERL 62 Query: 302 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVY 466 LA + +Y+ ++ +R+S A ++LL+N +Y + ++ G D G G Y Sbjct: 63 LARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYY 117
>PSB5_HUMAN (P28074) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) (Proteasome subunit MB1) Length = 208 Score = 45.8 bits (107), Expect = 6e-05 Identities = 30/115 (26%), Positives = 56/115 (48%) Frame = +2 Query: 122 NGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRN 301 +G T +A +VAAD+R + G I ++ K+ E+ + +G D +R Sbjct: 3 HGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERL 62 Query: 302 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVY 466 LA + +Y+ ++ +R+S A ++LL+N +Y + ++ G D G G Y Sbjct: 63 LARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYY 117
>PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 208 Score = 45.4 bits (106), Expect = 7e-05 Identities = 30/115 (26%), Positives = 56/115 (48%) Frame = +2 Query: 122 NGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRN 301 +G T +A +VAAD+R + G I ++ K+ E+ + +G D +R Sbjct: 3 HGTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAADCSFWERL 62 Query: 302 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVY 466 LA + +Y+ ++ +R+S A ++LL+N +Y + ++ G D G G Y Sbjct: 63 LARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYY 117
>PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 208 Score = 44.7 bits (104), Expect = 1e-04 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 2/110 (1%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNL 304 G T V I D ++AAD R S G+ + + K+ + DK I ++G D++ + L Sbjct: 14 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 73 Query: 305 AARELLYQHQHNKR--MSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSE 448 + + + + K +S +A L+N L ++FPY ++GG D + Sbjct: 74 --KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDDQ 121
>PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome chain 1) (Macropain chain 1) (Multicatalytic endopeptidase complex chain 1) (Proteasome subunit C1) (Fragment) Length = 256 Score = 44.3 bits (103), Expect = 2e-04 Identities = 30/115 (26%), Positives = 55/115 (47%) Frame = +2 Query: 122 NGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRN 301 +G T +A A VVA D+R + G I ++ K+ E+ + +G D +R Sbjct: 54 HGTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADCSFWERL 113 Query: 302 LAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVY 466 LA + +Y+ ++ + +S A ++LL+N +Y + ++ G D G G Y Sbjct: 114 LARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYY 168
>PSB2_ORYSA (Q9LST6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S| proteasome alpha subunit D) (20S proteasome subunit beta-4) Length = 212 Score = 41.6 bits (96), Expect = 0.001 Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 5/118 (4%) Frame = +2 Query: 137 VAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGD----IKALQRNL 304 + + G D VVAADT + + K+ L ++ +SG GD + +Q+NL Sbjct: 5 IGVVGRDIAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQKNL 64 Query: 305 AARELLYQHQHNKRMSCPAMAQLLSNTLYYK-RFFPYYAFNVLGGLDSEGKGCVYSYD 475 LYQ ++N +S A A L R PYY +L G DS+ +Y D Sbjct: 65 H----LYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYID 118
>PSB4_DROME (Q9VNA5) Probable proteasome subunit beta type 4 (EC 3.4.25.1)| Length = 268 Score = 39.3 bits (90), Expect = 0.005 Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Frame = +2 Query: 164 VVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNLAARELLYQH-QHN 340 ++AADT +S G + ++ ++ ++ SG DI++++RN+ + + Q N Sbjct: 70 MLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDDN 129 Query: 341 KRMSCPAMAQLLSNTLYYKR--FFPYYAFNVLGGLDSEG 451 M ++A ++ LY +R P Y V+GG+D+EG Sbjct: 130 IEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEG 168
>PSB2_DROME (Q9VQE5) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 210 Score = 38.5 bits (88), Expect = 0.009 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 5/121 (4%) Frame = +2 Query: 131 TCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNLAA 310 T + I G D+ ++A+DT + + + SKI L+D ++A+ G GD ++ Sbjct: 5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISK 64 Query: 311 RELLYQHQHNKRMSCPAMAQLLSNTL--YYKRFFPYYAFNVLGGLDS-EGKGCVY--SYD 475 LY+ H +S + A TL Y + Y +L G D+ EG Y SY Sbjct: 65 NLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYG 124 Query: 476 A 478 A Sbjct: 125 A 125
>PSA1_TRYBR (O96788) Proteasome subunit alpha type 1 (EC 3.4.25.1) (20S| proteasome subunit alpha-6) Length = 266 Score = 37.7 bits (86), Expect = 0.015 Identities = 26/86 (30%), Positives = 41/86 (47%) Frame = +2 Query: 119 NNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQR 298 NNG V + GADY V+ A R V + L+ K +L + +A SG D +AL R Sbjct: 30 NNGSAAVGVKGADYVVLTALKRNPV--SGLSSYQEKAFKLDEHVGMAISGLVADGRALSR 87 Query: 299 NLAARELLYQHQHNKRMSCPAMAQLL 376 L + Y++ H+ +A ++ Sbjct: 88 FLRTECMNYRYMHDSDAPLVMLADIV 113
>PSB2_RAT (P40307) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 36.6 bits (83), Expect = 0.034 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 2/115 (1%) Frame = +2 Query: 137 VAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNLAARE 316 + I G DY +VA+D + + +H K+ ++++K ++ G GD + Sbjct: 5 IGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNV 64 Query: 317 LLYQHQHNKRMSCPAMAQLLSNTL--YYKRFFPYYAFNVLGGLDSEGKGCVYSYD 475 LY+ ++ +S A A L + PY+ +L G D +Y D Sbjct: 65 QLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMD 119
>PSB2_MOUSE (Q9R1P3) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 36.6 bits (83), Expect = 0.034 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 2/115 (1%) Frame = +2 Query: 137 VAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNLAARE 316 + I G DY +VA+D + + +H K+ ++++K ++ G GD + Sbjct: 5 IGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNV 64 Query: 317 LLYQHQHNKRMSCPAMAQLLSNTL--YYKRFFPYYAFNVLGGLDSEGKGCVYSYD 475 LY+ ++ +S A A L + PY+ +L G D +Y D Sbjct: 65 QLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMD 119
>PSB2_HUMAN (P49721) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 36.6 bits (83), Expect = 0.034 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 2/115 (1%) Frame = +2 Query: 137 VAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQRNLAARE 316 + I G DY +VA+D + + +H K+ ++++K ++ G GD + Sbjct: 5 IGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNV 64 Query: 317 LLYQHQHNKRMSCPAMAQLLSNTL--YYKRFFPYYAFNVLGGLDSEGKGCVYSYD 475 LY+ ++ +S A A L + PY+ +L G D +Y D Sbjct: 65 QLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMD 119
>PSB5_SCHPO (P30655) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome component pts1) (Macropain subunit pts1) (Multicatalytic endopeptidase complex subunit pts1) Length = 272 Score = 35.8 bits (81), Expect = 0.059 Identities = 28/116 (24%), Positives = 50/116 (43%) Frame = +2 Query: 119 NNGGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKALQR 298 N+G T +A VV D+R S G I ++ K+ E+ + +G D + + Sbjct: 59 NHGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWET 118 Query: 299 NLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVY 466 L L+Q ++ + +S A +++LSN Y + + +L G G Y Sbjct: 119 VLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYY 174
>SEPP1_BOVIN (P49907) Selenoprotein P-like protein precursor| Length = 402 Score = 32.3 bits (72), Expect = 0.65 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +1 Query: 4 HFAFSSKPRTPATPHHQPPEQPAHSDHRHVEARRLG 111 H + S KP TP TP + P H HRH +R G Sbjct: 238 HLSESPKPDTPDTPENPPTSGLHHHHHRHKGPQRQG 273
>PSA71_DROME (P22769) Proteasome subunit alpha type 7-1 (EC 3.4.25.1)| (Proteasome 28 kDa subunit 1) (PROS-Dm28.1) Length = 249 Score = 30.8 bits (68), Expect = 1.9 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 4/118 (3%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGD----IKAL 292 G T V + GA+ CVV + SV R+ KIC L + V+A +G D I Sbjct: 31 GSTAVGVRGAN-CVVLGVEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLTADARIMINRA 89 Query: 293 QRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVY 466 Q + L + +AQL P+ ++GG D++G ++ Sbjct: 90 QVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLF 147
>BLAN_SERMA (P52682) Carbapenem-hydrolysing beta-lactamase Sme-1 precursor (EC| 3.5.2.6) Length = 294 Score = 30.4 bits (67), Expect = 2.5 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +2 Query: 104 DWVYENNGGTCVAIAGA-DYCVVAADTRLSVGYNILTREHSKICELADKCVIASS 265 DWV + G+C AI A DY V+ R + +I T SK + +DK + +S Sbjct: 232 DWVVGDKTGSCGAIGTANDYAVIWPKNRAPLIVSIYTTRKSKDDKHSDKTIAEAS 286
>TYK2_HUMAN (P29597) Non-receptor tyrosine-protein kinase TYK2 (EC 2.7.10.2)| Length = 1187 Score = 30.0 bits (66), Expect = 3.2 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +2 Query: 269 FQGDIKALQRNLAARELLYQHQHN-KRMSCPAMAQLLSNTLYYK 397 F G+ R+ + +E YQ QH SCP +A L S L Y+ Sbjct: 809 FDGEAPLQSRSPSEKEHFYQRQHRLPEPSCPQLATLTSQCLTYE 852
>Y2836_ANASP (P22639) Putative glycosyl transferase alr2836 (EC 2.-.-.-)| Length = 322 Score = 30.0 bits (66), Expect = 3.2 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = +2 Query: 239 ADKCVIASSGFQGDIKALQRNLAARELLYQHQHNKRMS 352 AD C+I + F G IK LQ NLA + H N MS Sbjct: 183 ADGCIIYCTAFLGKIKTLQENLAYYRI---HGANNHMS 217
>PSA73_DROME (Q27575) Proteasome subunit alpha type 7-1B (EC 3.4.25.1)| (Testis-specific proteasome 28 kDa subunit 1B) (Testis-specific alpha4-t2 proteasome subunit) Length = 252 Score = 30.0 bits (66), Expect = 3.2 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 4/121 (3%) Frame = +2 Query: 125 GGTCVAIAGADYCVVAADTRLSVGYNILTREHSKICELADKCVIASSGFQGDIKAL---- 292 G T + + + V+ + R SVG R KIC L D V+ SG D + L Sbjct: 31 GSTVMGLRTNNAIVIGVEKR-SVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRA 89 Query: 293 QRNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 472 Q + L ++ +AQL N P+ ++GG D +G ++ Sbjct: 90 QMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQT 149 Query: 473 D 475 D Sbjct: 150 D 150
>TRPD_PYRAE (Q8ZV45) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)| Length = 333 Score = 30.0 bits (66), Expect = 3.2 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 10/51 (19%) Frame = -1 Query: 262 RCYYTFIGQLADLGVLARE----------DVVSDGEAGVGGDHAVVRAGDG 140 R + +G LA+ G++ R+ DV+S+ A +G +HAVV G G Sbjct: 172 RTVFNIVGPLANPGLVKRQLIGVAETRLLDVISEAAARLGFEHAVVVHGSG 222
>PDC2_PEA (P51851) Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1) (PDC)| (Fragment) Length = 405 Score = 29.6 bits (65), Expect = 4.2 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +2 Query: 188 SVGYNILTREHSKICELADKCVIASSGFQGDI------KALQRNLAARELLYQHQH 337 SVGY++L ++ I + D+ VIA+ G + KAL + L + Y++ H Sbjct: 134 SVGYSLLLKKEKAIIVMPDRVVIANGPAFGCVLMNDFLKALAKRLKHNNVAYENYH 189
>BACA_RHIME (Q08120) Bacteroid development protein bacA| Length = 420 Score = 29.3 bits (64), Expect = 5.5 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = +2 Query: 311 RELLYQHQHNKRMSCPAMAQLLSNTL--YYKRFFPYYAFNV 427 +EL+Y H R +AQL N Y++ +F Y FN+ Sbjct: 285 KELVYGEDHEDRADPITLAQLFDNVRRNYFRLYFHYMYFNI 325
>GLGB_GLOVI (Q7NL20) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 733 Score = 28.9 bits (63), Expect = 7.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -3 Query: 416 HSMGRIACSTGCWRAIVPLLGSSSFY 339 H M R+ STG W +P LG + Y Sbjct: 162 HQMRRVERSTGIWELFIPELGEGTVY 187
>AERA_AERSA (Q08676) Aerolysin precursor (Hemolysin-3)| Length = 489 Score = 28.5 bits (62), Expect = 9.4 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +2 Query: 128 GTCVAIAGADYCVVAADTRLSVGYNILTREHS-KICELADKCVIASSGFQGDIK 286 GT V +G Y + D +S+ N+++R +I LAD+ VI G+ G+IK Sbjct: 40 GTGVCASG--YRPLTRDEAMSIKGNLVSRMGQWQITGLADRWVIMGPGYNGEIK 91
>AERA_AERSO (Q06304) Aerolysin precursor (Hemolysin)| Length = 488 Score = 28.5 bits (62), Expect = 9.4 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +2 Query: 128 GTCVAIAGADYCVVAADTRLSVGYNILTREHS-KICELADKCVIASSGFQGDIK 286 GT V +G Y + D +S+ N+++R +I LAD+ VI G+ G+IK Sbjct: 39 GTGVCASG--YRPLTRDEAMSIKGNLVSRMGQWQITGLADRWVIMGPGYNGEIK 90
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 16 SSKPRTPATPHHQPPEQPAHSDHRHVEA 99 S P PA+PHH PP Q HV A Sbjct: 421 SGHPLPPASPHHVPPLQQQPPPPPHVSA 448
>PSA4_CAEEL (Q9N599) Proteasome subunit alpha type 4 (EC 3.4.25.1) (Proteasome| subunit alpha 3) Length = 250 Score = 28.5 bits (62), Expect = 9.4 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 3/91 (3%) Frame = +2 Query: 119 NNGGTCVAIAGADYCVVAADTR---LSVGYNILTREHSKICELADKCVIASSGFQGDIKA 289 ++ GTC+ I ++ VVAA+ + + +++T K+ L+D +G D Sbjct: 29 SHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMT---EKVYRLSDNISCTVAGITADANI 85 Query: 290 LQRNLAARELLYQHQHNKRMSCPAMAQLLSN 382 L +L Y++ + + M + Q L N Sbjct: 86 LINHLRWWAASYRNSYGEEMPVEQLVQNLCN 116 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,962,685 Number of Sequences: 219361 Number of extensions: 927915 Number of successful extensions: 3509 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 3329 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3498 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
