ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast40d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103136.1| Oryza sativa (japonica cultivar-group) cDNA clon... 525 e-146
2dbj|AK060884.1| Oryza sativa (japonica cultivar-group) cDNA clon... 525 e-146
3dbj|AB014058.1| Oryza sativa (japonica cultivar-group) mRNA for ... 525 e-146
4gb|BT016605.1| Zea mays clone Contig438 mRNA sequence 434 e-118
5gb|BT016461.1| Zea mays clone Contig294 mRNA sequence 432 e-118
6gb|AY106447.1| Zea mays PCO091383 mRNA sequence 432 e-118
7gb|BT016245.1| Zea mays clone Contig78 mRNA sequence 204 2e-49
8gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome... 190 3e-45
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
10ref|XM_483459.1| Oryza sativa (japonica cultivar-group), mRNA 145 2e-31
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
12dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
13dbj|AK071019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
14emb|AJ291742.1|NTA291742 Nicotiana tabacum partial mRNA for puta... 80 7e-12
15gb|AC146330.33| Medicago truncatula clone mth2-7g7, complete seq... 74 5e-10
16gb|AF088915.1|AF088915 Petunia x hybrida proteasome beta subunit... 62 2e-06
17gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete s... 56 1e-04
18dbj|AK119439.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
19dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
20ref|NM_115946.2| Arabidopsis thaliana PBF1; endopeptidase/ pepti... 46 0.10
21ref|NM_001035828.1| Arabidopsis thaliana PBF1; endopeptidase/ pe... 46 0.10
22emb|X79806.1|ATPROTSU A.thaliana mRNA for proteasome subunit 46 0.10
23emb|X67338.1|ATPTSUB A.thaliana mRNA for proteasome subunit 46 0.10
24gb|AY081571.1| Arabidopsis thaliana proteasome component C5 (At3... 46 0.10
25gb|AY062790.1| Arabidopsis thaliana proteasome component C5 (At3... 46 0.10
26emb|BX824626.1|CNS0A6WI Arabidopsis thaliana Full-length cDNA Co... 46 0.10
27gb|AY086619.1| Arabidopsis thaliana clone 26273 mRNA, complete s... 46 0.10
28gb|AF043537.1|AF043537 Arabidopsis thaliana 20S proteasome beta ... 46 0.10
29ref|XM_381336.1| Gibberella zeae PH-1 chromosome 1 conserved hyp... 44 0.41
30emb|X79817.1|KPCITCDEF K.pneumoniae (ATCC 13882) citC, citD, cit... 42 1.6
31gb|AE004911.1| Pseudomonas aeruginosa PAO1, section 472 of 529 o... 42 1.6
32emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BA... 42 1.6
33gb|AY143385.1| Yersinia enterocolitica Y56 streptogramin acetyl ... 40 6.5
34gb|AC132355.4| Mus musculus BAC clone RP24-114M18 from chromosom... 40 6.5
35gb|AC139885.3| Mus musculus BAC clone RP23-349N15 from chromosom... 40 6.5
36gb|AC166261.6| Mus musculus BAC RP23-343K20 (Roswell Park Cance... 40 6.5
37ref|XM_744141.1| Aspergillus fumigatus Af293 hypothetical protei... 40 6.5
38ref|XM_963762.1| PREDICTED: Tribolium castaneum similar to Prote... 40 6.5
39emb|Z74096.1|SCYDL048C S.cerevisiae chromosome IV reading frame ... 40 6.5
40gb|AC092782.2| Homo sapiens chromosome 1 clone RP11-411G13, comp... 40 6.5
41gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.5
42gb|AC092806.2| Homo sapiens chromosome 1 clone RP11-156F12, comp... 40 6.5
43gb|AC156954.5| Mus musculus 6 BAC RP24-343M7 (Roswell Park Cance... 40 6.5
44dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
45dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.5
46gb|AY143387.1| Yersinia enterocolitica Y100 clone c/b blaA ampli... 40 6.5
47dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
48dbj|AP004750.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
49dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
50gb|AC153903.5| Mus musculus 6 BAC RP23-20C5 (Roswell Park Cancer... 40 6.5
51emb|BX537253.6| Mouse DNA sequence from clone RP24-173B15 on chr... 40 6.5
52dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
53emb|AL590968.8| Mouse DNA sequence from clone RP23-392I3 on chro... 40 6.5 
>dbj|AK103136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120E09, full
           insert sequence
          Length = 1039

 Score =  525 bits (265), Expect = e-146
 Identities = 349/377 (92%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccatgtcgaggcgcggcgactgggtctacgagaacaacggcgggacctgcgtggccatc 145
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 98  gccatgtcgaggcgcggcgactgggtctacgagaacaacggcgggacgtgcgtggccatc 157

                                                                       
Query: 146 gccggcgcggactactgcgtggtcgccgccgacacccgcctctccgtcggatacaacatc 205
           ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 158 gccggcgcggactactgcgtggtggccgccgatacccgcctttccgtcggatacaacatc 217

                                                                       
Query: 206 ctcacgcgcgagcactccaagatctgcgagctggccgataaatgtgtaatagcatcttct 265
           ||||||||||| |||||||||||||||||||| || || ||||| | | |||||||||| 
Sbjct: 218 ctcacgcgcgaccactccaagatctgcgagctagcggacaaatgcgcactagcatcttcc 277

                                                                       
Query: 266 ggcttccaaggtgacatcaaagctctacagaggaacttagcagccagagaactgctatac 325
           |||||||||||||| ||||||||||| || | |||||| || ||||||||| |||| |||
Sbjct: 278 ggcttccaaggtgatatcaaagctctgcacaagaacttggctgccagagaattgctgtac 337

                                                                       
Query: 326 cagcaccagcacaataaaaggatgagctgcccagcaatggcacaattgctctccaacacc 385
           |||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| 
Sbjct: 338 cagcaccagcacaataaaaggatgagctgccctgccatggcacaactgctctccaacact 397

                                                                       
Query: 386 ctgtactacaagcgattcttcccatactatgctttcaatgtgcttggtgggctcgacagt 445
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||
Sbjct: 398 ctgtactacaagcgattcttcccatattatgctttcaatgtacttggtgggcttgatagt 457

                            
Query: 446 gaagggaaaggatgtgt 462
           |||||||||||||||||
Sbjct: 458 gaagggaaaggatgtgt 474
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>dbj|AK060884.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B03, full
           insert sequence
          Length = 1024

 Score =  525 bits (265), Expect = e-146
 Identities = 349/377 (92%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccatgtcgaggcgcggcgactgggtctacgagaacaacggcgggacctgcgtggccatc 145
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 100 gccatgtcgaggcgcggcgactgggtctacgagaacaacggcgggacgtgcgtggccatc 159

                                                                       
Query: 146 gccggcgcggactactgcgtggtcgccgccgacacccgcctctccgtcggatacaacatc 205
           ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 160 gccggcgcggactactgcgtggtggccgccgatacccgcctttccgtcggatacaacatc 219

                                                                       
Query: 206 ctcacgcgcgagcactccaagatctgcgagctggccgataaatgtgtaatagcatcttct 265
           ||||||||||| |||||||||||||||||||| || || ||||| | | |||||||||| 
Sbjct: 220 ctcacgcgcgaccactccaagatctgcgagctagcggacaaatgcgcactagcatcttcc 279

                                                                       
Query: 266 ggcttccaaggtgacatcaaagctctacagaggaacttagcagccagagaactgctatac 325
           |||||||||||||| ||||||||||| || | |||||| || ||||||||| |||| |||
Sbjct: 280 ggcttccaaggtgatatcaaagctctgcacaagaacttggctgccagagaattgctgtac 339

                                                                       
Query: 326 cagcaccagcacaataaaaggatgagctgcccagcaatggcacaattgctctccaacacc 385
           |||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| 
Sbjct: 340 cagcaccagcacaataaaaggatgagctgccctgccatggcacaactgctctccaacact 399

                                                                       
Query: 386 ctgtactacaagcgattcttcccatactatgctttcaatgtgcttggtgggctcgacagt 445
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||
Sbjct: 400 ctgtactacaagcgattcttcccatattatgctttcaatgtacttggtgggcttgatagt 459

                            
Query: 446 gaagggaaaggatgtgt 462
           |||||||||||||||||
Sbjct: 460 gaagggaaaggatgtgt 476
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>dbj|AB014058.1| Oryza sativa (japonica cultivar-group) mRNA for beta 6 subunit of
           20S proteasome, complete cds
          Length = 1013

 Score =  525 bits (265), Expect = e-146
 Identities = 349/377 (92%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccatgtcgaggcgcggcgactgggtctacgagaacaacggcgggacctgcgtggccatc 145
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 112 gccatgtcgaggcgcggcgactgggtctacgagaacaacggcgggacgtgcgtggccatc 171

                                                                       
Query: 146 gccggcgcggactactgcgtggtcgccgccgacacccgcctctccgtcggatacaacatc 205
           ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 172 gccggcgcggactactgcgtggtggccgccgatacccgcctttccgtcggatacaacatc 231

                                                                       
Query: 206 ctcacgcgcgagcactccaagatctgcgagctggccgataaatgtgtaatagcatcttct 265
           ||||||||||| |||||||||||||||||||| || || ||||| | | |||||||||| 
Sbjct: 232 ctcacgcgcgaccactccaagatctgcgagctagcggacaaatgcgcactagcatcttcc 291

                                                                       
Query: 266 ggcttccaaggtgacatcaaagctctacagaggaacttagcagccagagaactgctatac 325
           |||||||||||||| ||||||||||| || | |||||| || ||||||||| |||| |||
Sbjct: 292 ggcttccaaggtgatatcaaagctctgcacaagaacttggctgccagagaattgctgtac 351

                                                                       
Query: 326 cagcaccagcacaataaaaggatgagctgcccagcaatggcacaattgctctccaacacc 385
           |||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| 
Sbjct: 352 cagcaccagcacaataaaaggatgagctgccctgccatggcacaactgctctccaacact 411

                                                                       
Query: 386 ctgtactacaagcgattcttcccatactatgctttcaatgtgcttggtgggctcgacagt 445
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||
Sbjct: 412 ctgtactacaagcgattcttcccatattatgctttcaatgtacttggtgggcttgatagt 471

                            
Query: 446 gaagggaaaggatgtgt 462
           |||||||||||||||||
Sbjct: 472 gaagggaaaggatgtgt 488
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>gb|BT016605.1| Zea mays clone Contig438 mRNA sequence
          Length = 1022

 Score =  434 bits (219), Expect = e-118
 Identities = 366/415 (88%)
 Strand = Plus / Plus

                                                                       
Query: 45  ccaccaccagccccccgagcagcccgcccactccgaccaccgccatgtcgaggcgcggcg 104
           |||||||||||  |||| |||||  || ||||||||||| ||||||||||||||||||||
Sbjct: 28  ccaccaccagcaacccgtgcagcgagcgcactccgaccatcgccatgtcgaggcgcggcg 87

                                                                       
Query: 105 actgggtctacgagaacaacggcgggacctgcgtggccatcgccggcgcggactactgcg 164
           ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 88  actgggtctacgagaacaacggcgggacctgcgtggccatcgccggcgctgattactgtg 147

                                                                       
Query: 165 tggtcgccgccgacacccgcctctccgtcggatacaacatcctcacgcgcgagcactcca 224
           | ||||| || |||||||||||||| || |||||||  ||||||||||| || |||||||
Sbjct: 148 tcgtcgctgcggacacccgcctctctgtaggatacagtatcctcacgcgtgatcactcca 207

                                                                       
Query: 225 agatctgcgagctggccgataaatgtgtaatagcatcttctggcttccaaggtgacatca 284
           |||||||||| ||||| || ||||||||| | |||||||||||||| |||||||| || |
Sbjct: 208 agatctgcgacctggctgacaaatgtgtactggcatcttctggctttcaaggtgatatta 267

                                                                       
Query: 285 aagctctacagaggaacttagcagccagagaactgctataccagcaccagcacaataaaa 344
           | ||||| |||| |||| |||| ||||||||| |||| ||||| |||||||| |||||||
Sbjct: 268 aggctctgcagaagaacctagctgccagagaattgctgtaccaacaccagcataataaaa 327

                                                                       
Query: 345 ggatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattct 404
           ||||||||||||| || ||||||||  | |||||||| ||||||||||||||||||||||
Sbjct: 328 ggatgagctgccccgccatggcacagctcctctccaataccctgtactacaagcgattct 387

                                                                  
Query: 405 tcccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatg 459
           ||||||| || || ||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 388 tcccatattacgccttcaatgtgctcggtgggcttgacagcgaggggaaaggatg 442
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>gb|BT016461.1| Zea mays clone Contig294 mRNA sequence
          Length = 1048

 Score =  432 bits (218), Expect = e-118
 Identities = 368/418 (88%)
 Strand = Plus / Plus

                                                                       
Query: 45  ccaccaccagccccccgagcagcccgcccactccgaccaccgccatgtcgaggcgcggcg 104
           ||||||| |||  |||| |||||  |||||| |||||||| |||||||||||||||||||
Sbjct: 23  ccaccactagcaacccgtgcagcgagcccaccccgaccactgccatgtcgaggcgcggcg 82

                                                                       
Query: 105 actgggtctacgagaacaacggcgggacctgcgtggccatcgccggcgcggactactgcg 164
           ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 83  actgggtctacgagaacaacggcgggacctgcgtggccatcgccggcgccgattactgtg 142

                                                                       
Query: 165 tggtcgccgccgacacccgcctctccgtcggatacaacatcctcacgcgcgagcactcca 224
           | ||||| || |||||||||||||| |||||||||| ||||||||||||||| ||||| |
Sbjct: 143 tcgtcgcggcggacacccgcctctctgtcggatacagcatcctcacgcgcgaccactcta 202

                                                                       
Query: 225 agatctgcgagctggccgataaatgtgtaatagcatcttctggcttccaaggtgacatca 284
           |||||||||| ||||| || ||||||||| |||||||||||||||| || ||||| || |
Sbjct: 203 agatctgcgacctggctgacaaatgtgtactagcatcttctggctttcagggtgatatta 262

                                                                       
Query: 285 aagctctacagaggaacttagcagccagagaactgctataccagcaccagcacaataaaa 344
           ||||||| || | |||| |||| ||||||||| |||||||||| |||||||| || ||||
Sbjct: 263 aagctctgcacaagaacctagctgccagagaattgctataccaacaccagcataacaaaa 322

                                                                       
Query: 345 ggatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattct 404
           ||||||||||||| || ||||||||  | |||||||| ||||||||||||||||| ||||
Sbjct: 323 ggatgagctgccctgccatggcacagctcctctccaataccctgtactacaagcgcttct 382

                                                                     
Query: 405 tcccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgt 462
           ||||||| || || ||||||||||| |||||||| ||||| || |||||||| |||||
Sbjct: 383 tcccatattacgccttcaatgtgctcggtgggcttgacagcgaggggaaagggtgtgt 440
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>gb|AY106447.1| Zea mays PCO091383 mRNA sequence
          Length = 1110

 Score =  432 bits (218), Expect = e-118
 Identities = 368/418 (88%)
 Strand = Plus / Plus

                                                                       
Query: 45  ccaccaccagccccccgagcagcccgcccactccgaccaccgccatgtcgaggcgcggcg 104
           ||||||| |||  |||| |||||  |||||| |||||||| |||||||||||||||||||
Sbjct: 45  ccaccactagcaacccgtgcagcgagcccaccccgaccactgccatgtcgaggcgcggcg 104

                                                                       
Query: 105 actgggtctacgagaacaacggcgggacctgcgtggccatcgccggcgcggactactgcg 164
           ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 105 actgggtctacgagaacaacggcgggacctgcgtggccatcgccggcgccgattactgtg 164

                                                                       
Query: 165 tggtcgccgccgacacccgcctctccgtcggatacaacatcctcacgcgcgagcactcca 224
           | ||||| || |||||||||||||| |||||||||| ||||||||||||||| ||||| |
Sbjct: 165 tcgtcgcggcggacacccgcctctctgtcggatacagcatcctcacgcgcgaccactcta 224

                                                                       
Query: 225 agatctgcgagctggccgataaatgtgtaatagcatcttctggcttccaaggtgacatca 284
           |||||||||| ||||| || ||||||||| |||||||||||||||| || ||||| || |
Sbjct: 225 agatctgcgacctggctgacaaatgtgtactagcatcttctggctttcagggtgatatta 284

                                                                       
Query: 285 aagctctacagaggaacttagcagccagagaactgctataccagcaccagcacaataaaa 344
           ||||||| || | |||| |||| ||||||||| |||||||||| |||||||| || ||||
Sbjct: 285 aagctctgcacaagaacctagctgccagagaattgctataccaacaccagcataacaaaa 344

                                                                       
Query: 345 ggatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattct 404
           ||||||||||||| || ||||||||  | |||||||| ||||||||||||||||| ||||
Sbjct: 345 ggatgagctgccctgccatggcacagctcctctccaataccctgtactacaagcgcttct 404

                                                                     
Query: 405 tcccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgt 462
           ||||||| || || ||||||||||| |||||||| ||||| || |||||||| |||||
Sbjct: 405 tcccatattacgccttcaatgtgctcggtgggcttgacagcgaggggaaagggtgtgt 462
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>gb|BT016245.1| Zea mays clone Contig78 mRNA sequence
          Length = 721

 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/203 (87%)
 Strand = Plus / Plus

                                                                       
Query: 257 gcatcttctggcttccaaggtgacatcaaagctctacagaggaacttagcagccagagaa 316
           |||||||||||||| |||||||| || || ||||| |||| |||| |||| |||||||||
Sbjct: 15  gcatcttctggctttcaaggtgatattaaggctctgcagaagaacctagctgccagagaa 74

                                                                       
Query: 317 ctgctataccagcaccagcacaataaaaggatgagctgcccagcaatggcacaattgctc 376
            |||| ||||| |||||||| |||||||||||||||||||| || ||||||||  | |||
Sbjct: 75  ttgctgtaccaacaccagcataataaaaggatgagctgccccgccatggcacagctcctc 134

                                                                       
Query: 377 tccaacaccctgtactacaagcgattcttcccatactatgctttcaatgtgcttggtggg 436
           ||||| ||||||||||||||||||||||||||||| || || ||||||||||| ||||||
Sbjct: 135 tccaataccctgtactacaagcgattcttcccatattacgccttcaatgtgctcggtggg 194

                                  
Query: 437 ctcgacagtgaagggaaaggatg 459
           || ||||| || |||||||||||
Sbjct: 195 cttgacagcgaggggaaaggatg 217
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>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0010B06, complete sequence
          Length = 129310

 Score =  190 bits (96), Expect = 3e-45
 Identities = 120/128 (93%)
 Strand = Plus / Plus

                                                                         
Query: 323   taccagcaccagcacaataaaaggatgagctgcccagcaatggcacaattgctctccaac 382
             ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct: 52856 taccagcaccagcacaataaaaggatgagctgccctgccatggcacaactgctctccaac 52915

                                                                         
Query: 383   accctgtactacaagcgattcttcccatactatgctttcaatgtgcttggtgggctcgac 442
             || |||||||||||||||||||||||||| |||||||||||||| ||||||||||| || 
Sbjct: 52916 actctgtactacaagcgattcttcccatattatgctttcaatgtacttggtgggcttgat 52975

                     
Query: 443   agtgaagg 450
             ||||||||
Sbjct: 52976 agtgaagg 52983



 Score =  178 bits (90), Expect = 1e-41
 Identities = 105/110 (95%)
 Strand = Plus / Plus

                                                                         
Query: 129   ggacctgcgtggccatcgccggcgcggactactgcgtggtcgccgccgacacccgcctct 188
             |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct: 50745 ggacgtgcgtggccatcgccggcgcggactactgcgtggtggccgccgatacccgccttt 50804

                                                               
Query: 189   ccgtcggatacaacatcctcacgcgcgagcactccaagatctgcgagctg 238
             |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 50805 ccgtcggatacaacatcctcacgcgcgaccactccaagatctgcgagctg 50854



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 45/45 (100%)
 Strand = Plus / Plus

                                                          
Query: 86    gccatgtcgaggcgcggcgactgggtctacgagaacaacggcggg 130
             |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50605 gccatgtcgaggcgcggcgactgggtctacgagaacaacggcggg 50649



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                         
Query: 255   tagcatcttctggcttccaaggtgacatcaaagctctacagaggaacttagcagccagag 314
             |||||||||| |||||||||||||| ||||||||||| || | |||||| || |||||||
Sbjct: 52347 tagcatcttccggcttccaaggtgatatcaaagctctgcacaagaacttggctgccagag 52406

               
Query: 315   aa 316
             ||
Sbjct: 52407 aa 52408
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  190 bits (96), Expect = 3e-45
 Identities = 120/128 (93%)
 Strand = Plus / Plus

                                                                            
Query: 323      taccagcaccagcacaataaaaggatgagctgcccagcaatggcacaattgctctccaac 382
                ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct: 19269640 taccagcaccagcacaataaaaggatgagctgccctgccatggcacaactgctctccaac 19269699

                                                                            
Query: 383      accctgtactacaagcgattcttcccatactatgctttcaatgtgcttggtgggctcgac 442
                || |||||||||||||||||||||||||| |||||||||||||| ||||||||||| || 
Sbjct: 19269700 actctgtactacaagcgattcttcccatattatgctttcaatgtacttggtgggcttgat 19269759

                        
Query: 443      agtgaagg 450
                ||||||||
Sbjct: 19269760 agtgaagg 19269767



 Score =  178 bits (90), Expect = 1e-41
 Identities = 105/110 (95%)
 Strand = Plus / Plus

                                                                            
Query: 129      ggacctgcgtggccatcgccggcgcggactactgcgtggtcgccgccgacacccgcctct 188
                |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct: 19267529 ggacgtgcgtggccatcgccggcgcggactactgcgtggtggccgccgatacccgccttt 19267588

                                                                  
Query: 189      ccgtcggatacaacatcctcacgcgcgagcactccaagatctgcgagctg 238
                |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 19267589 ccgtcggatacaacatcctcacgcgcgaccactccaagatctgcgagctg 19267638



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 45/45 (100%)
 Strand = Plus / Plus

                                                             
Query: 86       gccatgtcgaggcgcggcgactgggtctacgagaacaacggcggg 130
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19267389 gccatgtcgaggcgcggcgactgggtctacgagaacaacggcggg 19267433



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                            
Query: 255      tagcatcttctggcttccaaggtgacatcaaagctctacagaggaacttagcagccagag 314
                |||||||||| |||||||||||||| ||||||||||| || | |||||| || |||||||
Sbjct: 19269131 tagcatcttccggcttccaaggtgatatcaaagctctgcacaagaacttggctgccagag 19269190

                  
Query: 315      aa 316
                ||
Sbjct: 19269191 aa 19269192



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 257      gcatcttctggcttccaaggtgacatcaaagct 289
                ||||||||| ||||||||||||| |||||||||
Sbjct: 10329193 gcatcttctcgcttccaaggtgatatcaaagct 10329161



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 399      gattcttcccatactatgctttca 422
                |||||||||||||||||| |||||
Sbjct: 16786961 gattcttcccatactatgttttca 16786938
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>ref|XM_483459.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1066

 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacgagaacaacggcgggacctgcgtggccatcgccggcgcggactactgcgtggtcgcc 172
           ||||||||||||||||| || ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 217 tacgagaacaacggcggcacgtgcgtggccgtcgccggcgccgactactgcgtggtcgcc 276

                                                
Query: 173 gccgacacccgcctctccgtcggatacaacatcctca 209
           |||||||| ||||||||||||||||||| ||||||||
Sbjct: 277 gccgacacgcgcctctccgtcggatacagcatcctca 313



 Score =  103 bits (52), Expect = 5e-19
 Identities = 109/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 347 atgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattcttc 406
           ||||||||||| || ||||| ||||| || |||||||| || ||||||||  | ||||||
Sbjct: 451 atgagctgccctgcgatggcgcaattactgtccaacacgctctactacaaaaggttcttc 510

                                                                       
Query: 407 ccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgtctac 466
           ||||||||||| ||||||||| | ||||| || ||||| ||||| ||||||||||||| |
Sbjct: 511 ccatactatgccttcaatgtgttgggtggacttgacagcgaaggtaaaggatgtgtcttc 570

                   
Query: 467 tcatatga 474
            |||||||
Sbjct: 571 acatatga 578
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Plus

                                                                            
Query: 113      tacgagaacaacggcgggacctgcgtggccatcgccggcgcggactactgcgtggtcgcc 172
                ||||||||||||||||| || ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 26335324 tacgagaacaacggcggcacgtgcgtggccgtcgccggcgccgactactgcgtggtcgcc 26335383

                                                     
Query: 173      gccgacacccgcctctccgtcggatacaacatcctca 209
                |||||||| ||||||||||||||||||| ||||||||
Sbjct: 26335384 gccgacacgcgcctctccgtcggatacagcatcctca 26335420



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                            
Query: 347      atgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattcttc 406
                ||||||||||| || ||||| ||||| || |||||||| || ||||||||  | ||||||
Sbjct: 26336349 atgagctgccctgcgatggcgcaattactgtccaacacgctctactacaaaaggttcttc 26336408

                                                            
Query: 407      ccatactatgctttcaatgtgcttggtgggctcgacagtgaagg 450
                ||||||||||| ||||||||| | ||||| || ||||| |||||
Sbjct: 26336409 ccatactatgccttcaatgtgttgggtggacttgacagcgaagg 26336452



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 22       aagccacgaactccggcgac 41
                ||||||||||||||||||||
Sbjct: 19948969 aagccacgaactccggcgac 19948950
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>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1770_H02
          Length = 170648

 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Plus

                                                                         
Query: 113   tacgagaacaacggcgggacctgcgtggccatcgccggcgcggactactgcgtggtcgcc 172
             ||||||||||||||||| || ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 64905 tacgagaacaacggcggcacgtgcgtggccgtcgccggcgccgactactgcgtggtcgcc 64964

                                                  
Query: 173   gccgacacccgcctctccgtcggatacaacatcctca 209
             |||||||| ||||||||||||||||||| ||||||||
Sbjct: 64965 gccgacacgcgcctctccgtcggatacagcatcctca 65001



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                         
Query: 347   atgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattcttc 406
             ||||||||||| || ||||| ||||| || |||||||| || ||||||||  | ||||||
Sbjct: 65930 atgagctgccctgcgatggcgcaattactgtccaacacgctctactacaaaaggttcttc 65989

                                                         
Query: 407   ccatactatgctttcaatgtgcttggtgggctcgacagtgaagg 450
             ||||||||||| ||||||||| | ||||| || ||||| |||||
Sbjct: 65990 ccatactatgccttcaatgtgttgggtggacttgacagcgaagg 66033
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>dbj|AK071019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080M07, full
           insert sequence
          Length = 1065

 Score =  145 bits (73), Expect = 2e-31
 Identities = 91/97 (93%)
 Strand = Plus / Plus

                                                                       
Query: 113 tacgagaacaacggcgggacctgcgtggccatcgccggcgcggactactgcgtggtcgcc 172
           ||||||||||||||||| || ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 216 tacgagaacaacggcggcacgtgcgtggccgtcgccggcgccgactactgcgtggtcgcc 275

                                                
Query: 173 gccgacacccgcctctccgtcggatacaacatcctca 209
           |||||||| ||||||||||||||||||| ||||||||
Sbjct: 276 gccgacacgcgcctctccgtcggatacagcatcctca 312



 Score =  103 bits (52), Expect = 5e-19
 Identities = 109/128 (85%)
 Strand = Plus / Plus

                                                                       
Query: 347 atgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattcttc 406
           ||||||||||| || ||||| ||||| || |||||||| || ||||||||  | ||||||
Sbjct: 450 atgagctgccctgcgatggcgcaattactgtccaacacgctctactacaaaaggttcttc 509

                                                                       
Query: 407 ccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgtctac 466
           ||||||||||| ||||||||| | ||||| || ||||| ||||| ||||||||||||| |
Sbjct: 510 ccatactatgccttcaatgtgttgggtggacttgacagcgaaggtaaaggatgtgtcttc 569

                   
Query: 467 tcatatga 474
            |||||||
Sbjct: 570 acatatga 577
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>emb|AJ291742.1|NTA291742 Nicotiana tabacum partial mRNA for putative beta6 proteasome
           subunit (b6 gene)
          Length = 577

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 124/152 (81%)
 Strand = Plus / Plus

                                                                       
Query: 323 taccagcaccagcacaataaaaggatgagctgcccagcaatggcacaattgctctccaac 382
           |||||||| |||||||||||   ||||||||| ||||| ||||  ||  |||| || |||
Sbjct: 219 taccagcatcagcacaataagcagatgagctgtccagctatgggccagctgctttcaaac 278

                                                                       
Query: 383 accctgtactacaagcgattcttcccatactatgctttcaatgtgcttggtgggctcgac 442
           || || |||||||| || |||||||| |||||| | |||||||| || ||||| || |||
Sbjct: 279 acgctatactacaaacgtttcttcccctactattcgttcaatgttctaggtggccttgac 338

                                           
Query: 443 agtgaagggaaaggatgtgtctactcatatga 474
           | |||||| || |||||||||| | |||||||
Sbjct: 339 aatgaaggaaagggatgtgtcttcacatatga 370
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>gb|AC146330.33| Medicago truncatula clone mth2-7g7, complete sequence
          Length = 117139

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                         
Query: 346   gatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattctt 405
             ||||||||| || |||||||| |||||||| || ||||| || || ||||| || |||||
Sbjct: 16720 gatgagctgtcctgcaatggctcaattgctttcaaacacactttattacaaacgcttctt 16779

                                                          
Query: 406   cccatactatgctttcaatgtgcttggtgggctcgacagtgaagg 450
              || |||||| ||||||||||| | ||||| || |||||||||||
Sbjct: 16780 tccttactattctttcaatgtgttgggtggccttgacagtgaagg 16824
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>gb|AF088915.1|AF088915 Petunia x hybrida proteasome beta subunit mRNA, complete cds
          Length = 925

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 106/131 (80%)
 Strand = Plus / Plus

                                                                       
Query: 323 taccagcaccagcacaataaaaggatgagctgcccagcaatggcacaattgctctccaac 382
           |||||||| |||||||| |||  ||||||||||||||| ||||  ||  | || || |||
Sbjct: 265 taccagcatcagcacaacaaacagatgagctgcccagctatgggtcagctactttcgaac 324

                                                                       
Query: 383 accctgtactacaagcgattcttcccatactatgctttcaatgtgcttggtgggctcgac 442
           || || |||||||| || |||||||| |||||  ||||||||||  | ||||| || || 
Sbjct: 325 actctatactacaaacgtttcttcccctactactctttcaatgtcttgggtggcctggat 384

                      
Query: 443 agtgaagggaa 453
           |||||||||||
Sbjct: 385 agtgaagggaa 395
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>gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete sequence
          Length = 104281

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                         
Query: 347   atgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattcttc 406
             ||||||||||| |||||||| || || || || ||||| || |||||||| || ||||| 
Sbjct: 26233 atgagctgccctgcaatggctcagttactttcaaacacactttactacaaacggttcttt 26292

                                                         
Query: 407   ccatactatgctttcaatgtgcttggtgggctcgacagtgaagg 450
             || || ||| ||||||||||  | || || ||||||||||||||
Sbjct: 26293 ccttattattctttcaatgttttgggcggtctcgacagtgaagg 26336
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>dbj|AK119439.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-B06, full
           insert sequence
          Length = 2480

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 86  gccatgtcgaggcgcggcgactgggtc 112
           |||||||||||||||||||||||||||
Sbjct: 110 gccatgtcgaggcgcggcgactgggtc 136
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>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1104_G11
          Length = 140093

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 257   gcatcttctggcttccaaggtgacatcaaagct 289
             ||||||||| ||||||||||||| |||||||||
Sbjct: 36898 gcatcttctcgcttccaaggtgatatcaaagct 36866
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>ref|NM_115946.2| Arabidopsis thaliana PBF1; endopeptidase/ peptidase/ threonine
           endopeptidase AT3G60820 (PBF1) transcript variant
           AT3G60820.1 mRNA, complete cds
          Length = 1075

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 346 gatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattctt 405
           ||||||||| || |||||||| ||  | ||||||||||| || || | |||||| || ||
Sbjct: 384 gatgagctgtcctgcaatggcccagcttctctccaacacgctttatttcaagcggttttt 443

                                                                      
Query: 406 cccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgtct 464
           ||| |||||||| || ||||| || || ||||| |||   ||||| ||||| |||||||
Sbjct: 444 cccctactatgcctttaatgttctaggagggcttgacgaggaaggaaaagggtgtgtct 502
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>ref|NM_001035828.1| Arabidopsis thaliana PBF1; endopeptidase/ peptidase/ threonine
           endopeptidase AT3G60820 (PBF1) transcript variant
           AT3G60820.2 mRNA, complete cds
          Length = 1075

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 346 gatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattctt 405
           ||||||||| || |||||||| ||  | ||||||||||| || || | |||||| || ||
Sbjct: 384 gatgagctgtcctgcaatggcccagcttctctccaacacgctttatttcaagcggttttt 443

                                                                      
Query: 406 cccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgtct 464
           ||| |||||||| || ||||| || || ||||| |||   ||||| ||||| |||||||
Sbjct: 444 cccctactatgcctttaatgttctaggagggcttgacgaggaaggaaaagggtgtgtct 502
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>emb|X79806.1|ATPROTSU A.thaliana mRNA for proteasome subunit
          Length = 978

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 346 gatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattctt 405
           ||||||||| || |||||||| ||  | ||||||||||| || || | |||||| || ||
Sbjct: 323 gatgagctgtcctgcaatggcccagcttctctccaacacgctttatttcaagcggttttt 382

                                                                      
Query: 406 cccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgtct 464
           ||| |||||||| || ||||| || || ||||| |||   ||||| ||||| |||||||
Sbjct: 383 cccctactatgcctttaatgttctaggagggcttgacgaggaaggaaaagggtgtgtct 441
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>emb|X67338.1|ATPTSUB A.thaliana mRNA for proteasome subunit
          Length = 921

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 346 gatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattctt 405
           ||||||||| || |||||||| ||  | ||||||||||| || || | |||||| || ||
Sbjct: 287 gatgagctgtcctgcaatggcccagcttctctccaacacgctttatttcaagcggttttt 346

                                                                      
Query: 406 cccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgtct 464
           ||| |||||||| || ||||| || || ||||| |||   ||||| ||||| |||||||
Sbjct: 347 cccctactatgcctttaatgttctaggagggcttgacgaggaaggaaaagggtgtgtct 405
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>gb|AY081571.1| Arabidopsis thaliana proteasome component C5 (At3g60820) mRNA,
           complete cds
          Length = 814

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 346 gatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattctt 405
           ||||||||| || |||||||| ||  | ||||||||||| || || | |||||| || ||
Sbjct: 264 gatgagctgtcctgcaatggcccagcttctctccaacacgctttatttcaagcggttttt 323

                                                                      
Query: 406 cccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgtct 464
           ||| |||||||| || ||||| || || ||||| |||   ||||| ||||| |||||||
Sbjct: 324 cccctactatgcctttaatgttctaggagggcttgacgaggaaggaaaagggtgtgtct 382
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>gb|AY062790.1| Arabidopsis thaliana proteasome component C5 (At3g60820; T4C21_230)
           mRNA, complete cds
          Length = 999

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 346 gatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattctt 405
           ||||||||| || |||||||| ||  | ||||||||||| || || | |||||| || ||
Sbjct: 363 gatgagctgtcctgcaatggcccagcttctctccaacacgctttatttcaagcggttttt 422

                                                                      
Query: 406 cccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgtct 464
           ||| |||||||| || ||||| || || ||||| |||   ||||| ||||| |||||||
Sbjct: 423 cccctactatgcctttaatgttctaggagggcttgacgaggaaggaaaagggtgtgtct 481
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>emb|BX824626.1|CNS0A6WI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH60ZE04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 983

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 346 gatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattctt 405
           ||||||||| || |||||||| ||  | ||||||||||| || || | |||||| || ||
Sbjct: 371 gatgagctgtcctgcaatggcccagcttctctccaacacgctttatttcaagcggttttt 430

                                                                      
Query: 406 cccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgtct 464
           ||| |||||||| || ||||| || || ||||| |||   ||||| ||||| |||||||
Sbjct: 431 cccctactatgcctttaatgttctaggagggcttgacgaggaaggaaaagggtgtgtct 489
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>gb|AY086619.1| Arabidopsis thaliana clone 26273 mRNA, complete sequence
          Length = 995

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 346 gatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattctt 405
           ||||||||| || |||||||| ||  | ||||||||||| || || | |||||| || ||
Sbjct: 384 gatgagctgtcctgcaatggcccagcttctctccaacacgctttatttcaagcggttttt 443

                                                                      
Query: 406 cccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgtct 464
           ||| |||||||| || ||||| || || ||||| |||   ||||| ||||| |||||||
Sbjct: 444 cccctactatgcctttaatgttctaggagggcttgacgaggaaggaaaagggtgtgtct 502
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>gb|AF043537.1|AF043537 Arabidopsis thaliana 20S proteasome beta subunit PBF1 (PBF1) mRNA,
           complete cds
          Length = 981

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 346 gatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattctt 405
           ||||||||| || |||||||| ||  | ||||||||||| || || | |||||| || ||
Sbjct: 349 gatgagctgtcctgcaatggcccagcttctctccaacacgctttatttcaagcggttttt 408

                                                                      
Query: 406 cccatactatgctttcaatgtgcttggtgggctcgacagtgaagggaaaggatgtgtct 464
           ||| |||||||| || ||||| || || ||||| |||   ||||| ||||| |||||||
Sbjct: 409 cccctactatgcctttaatgttctaggagggcttgacgaggaaggaaaagggtgtgtct 467
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>ref|XM_381336.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein
           (FG01160.1) partial mRNA
          Length = 795

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 394 caagcgattcttcccatactat 415
           ||||||||||||||||||||||
Sbjct: 414 caagcgattcttcccatactat 435
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>emb|X79817.1|KPCITCDEF K.pneumoniae (ATCC 13882) citC, citD, citE, citF, citG, dapB genes
          Length = 5593

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  gcgtggccatcgccggcgcgg 155
            |||||||||||||||||||||
Sbjct: 5056 gcgtggccatcgccggcgcgg 5076
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>gb|AE004911.1| Pseudomonas aeruginosa PAO1, section 472 of 529 of the complete
           genome
          Length = 12567

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 162 gcgtggtcgccgccgacaccc 182
           |||||||||||||||||||||
Sbjct: 512 gcgtggtcgccgccgacaccc 492
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>emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BAC clone T4C21
          Length = 107865

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                         
Query: 346   gatgagctgcccagcaatggcacaattgctctccaacaccctgtactacaagcgattctt 405
             ||||||||| || |||||||| ||  | ||||||||||| || || | |||||| || ||
Sbjct: 74090 gatgagctgtcctgcaatggcccagcttctctccaacacgctttatttcaagcggttttt 74031

                                  
Query: 406   cccatactatgctttcaatgt 426
             ||| |||||||| || |||||
Sbjct: 74030 cccctactatgcctttaatgt 74010
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>gb|AY143385.1| Yersinia enterocolitica Y56 streptogramin acetyl transferase (sat)
            gene, complete cds; and PA repeat protein gene, partial
            cds
          Length = 1500

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  accagcaccagcacaataaa 343
            ||||||||||||||||||||
Sbjct: 1340 accagcaccagcacaataaa 1321
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>gb|AC132355.4| Mus musculus BAC clone RP24-114M18 from chromosome 9, complete sequence
          Length = 192351

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 254    atagcatcttctggcttccaaggt 277
              ||||| ||||||||||||||||||
Sbjct: 182741 atagcctcttctggcttccaaggt 182718
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>gb|AC139885.3| Mus musculus BAC clone RP23-349N15 from chromosome 9, complete sequence
          Length = 207340

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 254   atagcatcttctggcttccaaggt 277
             ||||| ||||||||||||||||||
Sbjct: 86341 atagcctcttctggcttccaaggt 86318
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>gb|AC166261.6| Mus musculus  BAC RP23-343K20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190585

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 440    gacagtgaagggaaaggatg 459
              ||||||||||||||||||||
Sbjct: 176582 gacagtgaagggaaaggatg 176601
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>ref|XM_744141.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g00980)
           partial mRNA
          Length = 600

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   ccacttcgccttctcctcca 22
           ||||||||||||||||||||
Sbjct: 315 ccacttcgccttctcctcca 296
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>ref|XM_963762.1| PREDICTED: Tribolium castaneum similar to Proteasome subunit beta
           type 1 (Proteasome 26 kDa subunit) (LOC657294), mRNA
          Length = 811

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 387 tgtactacaagcgattcttcccatacta 414
           ||||||||||||| || |||||||||||
Sbjct: 417 tgtactacaagcggtttttcccatacta 444
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>emb|Z74096.1|SCYDL048C S.cerevisiae chromosome IV reading frame ORF YDL048c
          Length = 3894

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 449 gggaaaggatgtgtctactcatat 472
           ||||||||||||| ||||||||||
Sbjct: 894 gggaaaggatgtggctactcatat 871
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>gb|AC092782.2| Homo sapiens chromosome 1 clone RP11-411G13, complete sequence
          Length = 155355

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    tccaaggtgacatcaaagct 289
              ||||||||||||||||||||
Sbjct: 108842 tccaaggtgacatcaaagct 108861
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     ccgaccaccgccatgtcgaggcgc 100
              ||||||||||| ||||||||||||
Sbjct: 184796 ccgaccaccgcaatgtcgaggcgc 184773
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>gb|AC092806.2| Homo sapiens chromosome 1 clone RP11-156F12, complete sequence
          Length = 153527

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 tccaaggtgacatcaaagct 289
           ||||||||||||||||||||
Sbjct: 232 tccaaggtgacatcaaagct 251
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>gb|AC156954.5| Mus musculus 6 BAC RP24-343M7 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 179140

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 440    gacagtgaagggaaaggatg 459
              ||||||||||||||||||||
Sbjct: 168375 gacagtgaagggaaaggatg 168356
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 8        tcgccttctcctccaagcca 27
                ||||||||||||||||||||
Sbjct: 12505317 tcgccttctcctccaagcca 12505298
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 52      cagccccccgagcagcccgcccac 75
               |||||||||||| |||||||||||
Sbjct: 3521086 cagccccccgaggagcccgcccac 3521063



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 45      ccaccaccagccccccgagcagcc 68
               ||||||||||| ||||||||||||
Sbjct: 1842620 ccaccaccagcgccccgagcagcc 1842597



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    cgtggtcgccgccgacaccc 182
              ||||||||||||||||||||
Sbjct: 190467 cgtggtcgccgccgacaccc 190448
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>gb|AY143387.1| Yersinia enterocolitica Y100 clone c/b blaA amplification units,
           partial sequence
          Length = 868

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 accagcaccagcacaataaa 343
           ||||||||||||||||||||
Sbjct: 708 accagcaccagcacaataaa 689
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>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0433E10
          Length = 144643

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     aagccacgaactccggcgac 41
              ||||||||||||||||||||
Sbjct: 117147 aagccacgaactccggcgac 117128
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>dbj|AP004750.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0421H01
          Length = 142638

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     tcgccttctcctccaagcca 27
             ||||||||||||||||||||
Sbjct: 79051 tcgccttctcctccaagcca 79032
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>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0047B10
          Length = 158798

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 399    gattcttcccatactatgctttca 422
              |||||||||||||||||| |||||
Sbjct: 135655 gattcttcccatactatgttttca 135632
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>gb|AC153903.5| Mus musculus 6 BAC RP23-20C5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 210370

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   gacagtgaagggaaaggatg 459
             ||||||||||||||||||||
Sbjct: 82273 gacagtgaagggaaaggatg 82254
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>emb|BX537253.6| Mouse DNA sequence from clone RP24-173B15 on chromosome 2, complete
              sequence
          Length = 161021

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    gggaaaggatgtgtctactc 468
              ||||||||||||||||||||
Sbjct: 138323 gggaaaggatgtgtctactc 138342
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>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0477F03
          Length = 176120

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    aagccacgaactccggcgac 41
             ||||||||||||||||||||
Sbjct: 20820 aagccacgaactccggcgac 20801
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>emb|AL590968.8| Mouse DNA sequence from clone RP23-392I3 on chromosome 11, complete
              sequence
          Length = 217092

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 253    aatagcatcttctggcttccaagg 276
              |||| |||||||||||||||||||
Sbjct: 182153 aataccatcttctggcttccaagg 182130


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,965,294
Number of Sequences: 3902068
Number of extensions: 3965294
Number of successful extensions: 79181
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 78778
Number of HSP's gapped (non-prelim): 403
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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