ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast40d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065012.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 6e-37
2ref|XM_465492.1| Oryza sativa (japonica cultivar-group), mRNA 109 8e-21
3ref|XM_506799.1| PREDICTED Oryza sativa (japonica cultivar-group... 109 8e-21
4dbj|AK119466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
5dbj|AK104969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
6dbj|AK072619.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
7ref|XM_471553.1| Oryza sativa (japonica cultivar-group), predic... 100 8e-18
8emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4,... 100 8e-18
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
11dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
12gb|AY104128.1| Zea mays PCO108530 mRNA sequence 62 2e-06
13gb|AF140492.1|AF140492 Oryza sativa unknown mRNA 50 0.006
14gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytans... 46 0.10
15dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 46 0.10
16ref|XM_541569.2| PREDICTED: Canis familiaris similar to reticulo... 44 0.40
17dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
18gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
19emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.40
20emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.40
21gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.6
22gb|AE006004.1| Caulobacter crescentus CB15 section 330 of 359 of... 42 1.6
23dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
24dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.6
26emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.6
27emb|AL713929.5|CNS07YP6 Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.6
28ref|XM_466195.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
29gb|AC093439.2| Drosophila melanogaster clone BACR28A12, complete... 40 6.2
30ref|XM_425745.1| PREDICTED: Gallus gallus similar to Carbonic an... 40 6.2
31emb|AL162375.24| Human DNA sequence from clone RP11-282D2 on chr... 40 6.2
32gb|AE012412.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.2
33ref|NM_135739.2| Drosophila melanogaster CG5781-RA (CG5781), mRNA 40 6.2
34gb|AE009813.1|AE009813 Pyrobaculum aerophilum strain IM2 section... 40 6.2
35gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.2
36gb|S76408.1| mcenA=endo-beta-1,4-glucanase [Micromonospora cellu... 40 6.2
37emb|BX931211.1| Gallus gallus finished cDNA, clone ChEST593n22 40 6.2
38dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
39dbj|AK072252.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
40emb|CR628369.8| Zebrafish DNA sequence from clone DKEY-165L8 in ... 40 6.2
41gb|AE003637.3| Drosophila melanogaster chromosome 2L, section 46... 40 6.2
42gb|AC005891.1|AC005891 Drosophila melanogaster, chromosome 2L, r... 40 6.2 
>dbj|AK065012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F04, full
           insert sequence
          Length = 1109

 Score =  163 bits (82), Expect = 6e-37
 Identities = 169/198 (85%)
 Strand = Plus / Plus

                                                                       
Query: 264 cgccagtgcaggtgcctccgccgcagttcgagaaggcagaggctaggacggatggatcgg 323
           |||| ||||||||||| |||||||||||||||||||| ||||| ||| | ||||||||  
Sbjct: 489 cgccggtgcaggtgccgccgccgcagttcgagaaggcggaggcgaggcccgatggatcca 548

                                                                       
Query: 324 cgtttggcttcttctgggacgcggttttgcgcgtgcaagaagcgcacgcaagcttggatg 383
            | | | ||| ||||||||| ||||   ||||||||||||||||||||| |||||||| |
Sbjct: 549 tgctcgccttgttctgggacacggtcgcgcgcgtgcaagaagcgcacgccagcttggacg 608

                                                                       
Query: 384 agtacatttcgaattggttcgggctcgatcaatccaaataccagtgggcgctgaacgact 443
           ||||||| ||||| ||||||||||| ||||||||||| ||||||||||| || ||||| |
Sbjct: 609 agtacatctcgaactggttcgggctggatcaatccaagtaccagtgggctctcaacgagt 668

                             
Query: 444 attacgagagcaccggaa 461
           | || ||||||| |||||
Sbjct: 669 actatgagagcaacggaa 686



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 6   gcaaggcgggaaacctcactgtcttcatcacgcc 39
           |||||||||| |||||||| ||||||||||||||
Sbjct: 138 gcaaggcgggcaacctcacggtcttcatcacgcc 171



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 209 ccgccggtcaagacggtctccccgccactgcc 240
           |||||||| ||||||||||| ||||| |||||
Sbjct: 353 ccgccggtgaagacggtctcaccgccgctgcc 384
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>ref|XM_465492.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 961

 Score =  109 bits (55), Expect = 8e-21
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 317 ggatcggcgtttggcttcttctgggacgcggttttgcgcgtgcaagaagcgcacgcaagc 376
           |||||||||||||| |||||||||||||| ||   ||||||||| ||||| ||||| |||
Sbjct: 455 ggatcggcgtttggtttcttctgggacgccgtcgcgcgcgtgcaggaagcccacgcgagc 514

                                                                       
Query: 377 ttggatgagtacatttcgaattggttcgggctcgatcaatccaaataccagtgggcgctg 436
            | || |||||| |  |||| ||||| ||||| ||||||||||| ||||| ||||| || 
Sbjct: 515 ctcgacgagtacgtggcgaactggtttgggctggatcaatccaagtaccaatgggctctc 574

                                  
Query: 437 aacgactattacgagagcaccgg 459
           |||||||| ||||||||||||||
Sbjct: 575 aacgactactacgagagcaccgg 597



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 269 gtgcaggtgcctccgccgcagttcgagaaggc 300
           ||||||||||| |||||||||| |||||||||
Sbjct: 401 gtgcaggtgcccccgccgcagtacgagaaggc 432
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>ref|XM_506799.1| PREDICTED Oryza sativa (japonica cultivar-group), P0644G05.32-1
           mRNA
          Length = 981

 Score =  109 bits (55), Expect = 8e-21
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 317 ggatcggcgtttggcttcttctgggacgcggttttgcgcgtgcaagaagcgcacgcaagc 376
           |||||||||||||| |||||||||||||| ||   ||||||||| ||||| ||||| |||
Sbjct: 438 ggatcggcgtttggtttcttctgggacgccgtcgcgcgcgtgcaggaagcccacgcgagc 497

                                                                       
Query: 377 ttggatgagtacatttcgaattggttcgggctcgatcaatccaaataccagtgggcgctg 436
            | || |||||| |  |||| ||||| ||||| ||||||||||| ||||| ||||| || 
Sbjct: 498 ctcgacgagtacgtggcgaactggtttgggctggatcaatccaagtaccaatgggctctc 557

                                  
Query: 437 aacgactattacgagagcaccgg 459
           |||||||| ||||||||||||||
Sbjct: 558 aacgactactacgagagcaccgg 580



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 269 gtgcaggtgcctccgccgcagttcgagaaggc 300
           ||||||||||| |||||||||| |||||||||
Sbjct: 384 gtgcaggtgcccccgccgcagtacgagaaggc 415
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>dbj|AK119466.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-A03, full
           insert sequence
          Length = 2061

 Score =  109 bits (55), Expect = 8e-21
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 317 ggatcggcgtttggcttcttctgggacgcggttttgcgcgtgcaagaagcgcacgcaagc 376
           |||||||||||||| |||||||||||||| ||   ||||||||| ||||| ||||| |||
Sbjct: 485 ggatcggcgtttggtttcttctgggacgccgtcgcgcgcgtgcaggaagcccacgcgagc 544

                                                                       
Query: 377 ttggatgagtacatttcgaattggttcgggctcgatcaatccaaataccagtgggcgctg 436
            | || |||||| |  |||| ||||| ||||| ||||||||||| ||||| ||||| || 
Sbjct: 545 ctcgacgagtacgtggcgaactggtttgggctggatcaatccaagtaccaatgggctctc 604

                                  
Query: 437 aacgactattacgagagcaccgg 459
           |||||||| ||||||||||||||
Sbjct: 605 aacgactactacgagagcaccgg 627



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 269 gtgcaggtgcctccgccgcagttcgagaaggc 300
           ||||||||||| |||||||||| |||||||||
Sbjct: 431 gtgcaggtgcccccgccgcagtacgagaaggc 462
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>dbj|AK104969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-E11, full
           insert sequence
          Length = 982

 Score =  109 bits (55), Expect = 8e-21
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 317 ggatcggcgtttggcttcttctgggacgcggttttgcgcgtgcaagaagcgcacgcaagc 376
           |||||||||||||| |||||||||||||| ||   ||||||||| ||||| ||||| |||
Sbjct: 438 ggatcggcgtttggtttcttctgggacgccgtcgcgcgcgtgcaggaagcccacgcgagc 497

                                                                       
Query: 377 ttggatgagtacatttcgaattggttcgggctcgatcaatccaaataccagtgggcgctg 436
            | || |||||| |  |||| ||||| ||||| ||||||||||| ||||| ||||| || 
Sbjct: 498 ctcgacgagtacgtggcgaactggtttgggctggatcaatccaagtaccaatgggctctc 557

                                  
Query: 437 aacgactattacgagagcaccgg 459
           |||||||| ||||||||||||||
Sbjct: 558 aacgactactacgagagcaccgg 580



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 269 gtgcaggtgcctccgccgcagttcgagaaggc 300
           ||||||||||| |||||||||| |||||||||
Sbjct: 384 gtgcaggtgcccccgccgcagtacgagaaggc 415
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>dbj|AK072619.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131E20, full
           insert sequence
          Length = 960

 Score =  109 bits (55), Expect = 8e-21
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 317 ggatcggcgtttggcttcttctgggacgcggttttgcgcgtgcaagaagcgcacgcaagc 376
           |||||||||||||| |||||||||||||| ||   ||||||||| ||||| ||||| |||
Sbjct: 454 ggatcggcgtttggtttcttctgggacgccgtcgcgcgcgtgcaggaagcccacgcgagc 513

                                                                       
Query: 377 ttggatgagtacatttcgaattggttcgggctcgatcaatccaaataccagtgggcgctg 436
            | || |||||| |  |||| ||||| ||||| ||||||||||| ||||| ||||| || 
Sbjct: 514 ctcgacgagtacgtggcgaactggtttgggctggatcaatccaagtaccaatgggctctc 573

                                  
Query: 437 aacgactattacgagagcaccgg 459
           |||||||| ||||||||||||||
Sbjct: 574 aacgactactacgagagcaccgg 596



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 269 gtgcaggtgcctccgccgcagttcgagaaggc 300
           ||||||||||| |||||||||| |||||||||
Sbjct: 400 gtgcaggtgcccccgccgcagtacgagaaggc 431
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>ref|XM_471553.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 546

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Plus

                                                                       
Query: 364 agcgcacgcaagcttggatgagtacatttcgaattggttcgggctcgatcaatccaaata 423
           ||||||||| |||||||| |||||||| ||||| ||||||||||| ||||||||||| ||
Sbjct: 333 agcgcacgccagcttggacgagtacatctcgaactggttcgggctggatcaatccaagta 392

                                                 
Query: 424 ccagtgggcgctgaacgactattacgagagcaccggaa 461
           ||||||||| || ||||| || || ||||||| |||||
Sbjct: 393 ccagtgggctctcaacgagtactatgagagcaacggaa 430



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 6  gcaaggcgggaaacctcactgtcttcatcacgcc 39
          |||||||||| |||||||| ||||||||||||||
Sbjct: 35 gcaaggcgggcaacctcacggtcttcatcacgcc 68



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 209 ccgccggtcaagacggtctccccgccactgcc 240
           |||||||| ||||||||||| ||||| |||||
Sbjct: 251 ccgccggtgaagacggtctcaccgccgctgcc 282
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>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05,
             complete sequence
          Length = 185211

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                         
Query: 364   agcgcacgcaagcttggatgagtacatttcgaattggttcgggctcgatcaatccaaata 423
             ||||||||| |||||||| |||||||| ||||| ||||||||||| ||||||||||| ||
Sbjct: 93796 agcgcacgccagcttggacgagtacatctcgaactggttcgggctggatcaatccaagta 93737

                                                   
Query: 424   ccagtgggcgctgaacgactattacgagagcaccggaa 461
             ||||||||| || ||||| || || ||||||| |||||
Sbjct: 93736 ccagtgggctctcaacgagtactatgagagcaacggaa 93699



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                         
Query: 264   cgccagtgcaggtgcctccgccgcagttcgagaaggcagaggctaggacggatggatcgg 323
             |||| ||||||||||| |||||||||||||||||||| ||||| ||| | ||||||||  
Sbjct: 94032 cgccggtgcaggtgccgccgccgcagttcgagaaggcggaggcgaggcccgatggatcca 93973

                                                       
Query: 324   cgtttggcttcttctgggacgcggttttgcgcgtgcaagaag 365
              | | | ||| ||||||||| ||||   ||||||||||||||
Sbjct: 93972 tgctcgccttgttctgggacacggtcgcgcgcgtgcaagaag 93931



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 6     gcaaggcgggaaacctcactgtcttcatcacgcc 39
             |||||||||| |||||||| ||||||||||||||
Sbjct: 94384 gcaaggcgggcaacctcacggtcttcatcacgcc 94351



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 209   ccgccggtcaagacggtctccccgccactgcc 240
             |||||||| ||||||||||| ||||| |||||
Sbjct: 94168 ccgccggtgaagacggtctcaccgccgctgcc 94137
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                            
Query: 364      agcgcacgcaagcttggatgagtacatttcgaattggttcgggctcgatcaatccaaata 423
                ||||||||| |||||||| |||||||| ||||| ||||||||||| ||||||||||| ||
Sbjct: 12268915 agcgcacgccagcttggacgagtacatctcgaactggttcgggctggatcaatccaagta 12268856

                                                      
Query: 424      ccagtgggcgctgaacgactattacgagagcaccggaa 461
                ||||||||| || ||||| || || ||||||| |||||
Sbjct: 12268855 ccagtgggctctcaacgagtactatgagagcaacggaa 12268818



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 85/102 (83%)
 Strand = Plus / Minus

                                                                            
Query: 264      cgccagtgcaggtgcctccgccgcagttcgagaaggcagaggctaggacggatggatcgg 323
                |||| ||||||||||| |||||||||||||||||||| ||||| ||| | ||||||||  
Sbjct: 12269151 cgccggtgcaggtgccgccgccgcagttcgagaaggcggaggcgaggcccgatggatcca 12269092

                                                          
Query: 324      cgtttggcttcttctgggacgcggttttgcgcgtgcaagaag 365
                 | | | ||| ||||||||| ||||   ||||||||||||||
Sbjct: 12269091 tgctcgccttgttctgggacacggtcgcgcgcgtgcaagaag 12269050



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 6        gcaaggcgggaaacctcactgtcttcatcacgcc 39
                |||||||||| |||||||| ||||||||||||||
Sbjct: 12269502 gcaaggcgggcaacctcacggtcttcatcacgcc 12269469



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 209      ccgccggtcaagacggtctccccgccactgcc 240
                |||||||| ||||||||||| ||||| |||||
Sbjct: 12269287 ccgccggtgaagacggtctcaccgccgctgcc 12269256
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                            
Query: 393      cgaattggttcgggctcgatcaatccaaataccagtgggcgctgaacgactattacgaga 452
                |||| ||||| ||||| ||||||||||| ||||| ||||| || |||||||| |||||||
Sbjct: 15585027 cgaactggtttgggctggatcaatccaagtaccaatgggctctcaacgactactacgaga 15584968

                       
Query: 453      gcaccgg 459
                |||||||
Sbjct: 15584967 gcaccgg 15584961



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 317      ggatcggcgtttggcttcttctgggacgc 345
                |||||||||||||| ||||||||||||||
Sbjct: 15585199 ggatcggcgtttggtttcttctgggacgc 15585171



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 269      gtgcaggtgcctccgccgcagttcgagaaggc 300
                ||||||||||| |||||||||| |||||||||
Sbjct: 15585253 gtgcaggtgcccccgccgcagtacgagaaggc 15585222



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 135      tggcgtctcccgcgtccccgccgcc 159
                |||||||||||||||||||| ||||
Sbjct: 27060567 tggcgtctcccgcgtccccggcgcc 27060543



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 39       ccccggccacgccgccgccg 58
                ||||||||||||||||||||
Sbjct: 20981280 ccccggccacgccgccgccg 20981261
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>dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0644G05
          Length = 143119

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                          
Query: 393    cgaattggttcgggctcgatcaatccaaataccagtgggcgctgaacgactattacgaga 452
              |||| ||||| ||||| ||||||||||| ||||| ||||| || |||||||| |||||||
Sbjct: 112587 cgaactggtttgggctggatcaatccaagtaccaatgggctctcaacgactactacgaga 112528

                     
Query: 453    gcaccgg 459
              |||||||
Sbjct: 112527 gcaccgg 112521



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 317    ggatcggcgtttggcttcttctgggacgc 345
              |||||||||||||| ||||||||||||||
Sbjct: 112759 ggatcggcgtttggtttcttctgggacgc 112731



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 269    gtgcaggtgcctccgccgcagttcgagaaggc 300
              ||||||||||| |||||||||| |||||||||
Sbjct: 112813 gtgcaggtgcccccgccgcagtacgagaaggc 112782
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>gb|AY104128.1| Zea mays PCO108530 mRNA sequence
          Length = 599

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 107/133 (80%)
 Strand = Plus / Plus

                                                                       
Query: 319 atcggcgtttggcttcttctgggacgcggttttgcgcgtgcaagaagcgcacgcaagctt 378
           ||||||||| ||||||||||||||||| ||   |||||| || ||||||||||| ||| |
Sbjct: 467 atcggcgttcggcttcttctgggacgccgtcgcgcgcgtccaggaagcgcacgcgagcct 526

                                                                       
Query: 379 ggatgagtacatttcgaattggttcgggctcgatcaatccaaataccagtgggcgctgaa 438
            || |||||| | || |  ||||||||| | ||||| ||||     ||||||||||| ||
Sbjct: 527 cgacgagtacgtgtctacctggttcgggttggatcagtccanngtacagtgggcgcttaa 586

                        
Query: 439 cgactattacgag 451
           |||||| ||||||
Sbjct: 587 cgactactacgag 599



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 264 cgccagtgcaggtgcctccgccgcagttcgagaaggc 300
           |||| ||||||||||| |||||||||| |||||||||
Sbjct: 406 cgccggtgcaggtgccgccgccgcagtacgagaaggc 442
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>gb|AF140492.1|AF140492 Oryza sativa unknown mRNA
          Length = 429

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 423 accagtgggcgctgaacgactattacgagagcaccgg 459
           |||| |||||||| |||||||| ||||||||||||||
Sbjct: 1   accaatgggcgctcaacgactactacgagagcaccgg 37
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>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent
             ansamitocin biosynthetic gene cluster I, partial sequence
          Length = 82746

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 37    gcccccggccacgccgccgccggtgga 63
             |||||||||||||||||||| ||||||
Sbjct: 46083 gcccccggccacgccgccgctggtgga 46057
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 309     ggacggatggatcggcgtttggc 331
               |||||||||||||||||||||||
Sbjct: 5372889 ggacggatggatcggcgtttggc 5372911
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>ref|XM_541569.2| PREDICTED: Canis familiaris similar to reticuloendotheliosis viral
           oncogene homolog B (LOC484454), mRNA
          Length = 1979

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 36  cgcccccggccacgccgccgcc 57
           ||||||||||||||||||||||
Sbjct: 170 cgcccccggccacgccgccgcc 191
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                         
Query: 264     cgccagtgcaggtgcctccgccgcagttcgagaaggcagaggctaggacggatggatc 321
               ||||||||||||||||  ||| ||| |||||||||||  |||| ||| | ||||||||
Sbjct: 4080479 cgccagtgcaggtgccatcgctgcaattcgagaaggcgcaggcgaggcccgatggatc 4080536



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 281      ccgccgcagttcgagaaggca 301
                |||||||||||||||||||||
Sbjct: 13581018 ccgccgcagttcgagaaggca 13580998
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                         
Query: 264     cgccagtgcaggtgcctccgccgcagttcgagaaggcagaggctaggacggatggatc 321
               ||||||||||||||||  ||| ||| |||||||||||  |||| ||| | ||||||||
Sbjct: 4080466 cgccagtgcaggtgccatcgctgcaattcgagaaggcgcaggcgaggcccgatggatc 4080523



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 281      ccgccgcagttcgagaaggca 301
                |||||||||||||||||||||
Sbjct: 13535292 ccgccgcagttcgagaaggca 13535272
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>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 123469

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 264   cgccagtgcaggtgcctccgccgcagttcgagaaggcagaggctaggacggatggatc 321
             ||||||||||||||||  ||| ||| |||||||||||  |||| ||| | ||||||||
Sbjct: 22875 cgccagtgcaggtgccatcgctgcaattcgagaaggcgcaggcgaggcccgatggatc 22932
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>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 132682

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                        
Query: 264    cgccagtgcaggtgcctccgccgcagttcgagaaggcagaggctaggacggatggatc 321
              ||||||||||||||||  ||| ||| |||||||||||  |||| ||| | ||||||||
Sbjct: 116900 cgccagtgcaggtgccatcgctgcaattcgagaaggcgcaggcgaggcccgatggatc 116957
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 26     gtcttcatcacgcccccggcc 46
              |||||||||||||||||||||
Sbjct: 620178 gtcttcatcacgcccccggcc 620158



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    cacatcgcctccgccgccca 191
              ||||||||||||||||||||
Sbjct: 329864 cacatcgcctccgccgccca 329845
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>gb|AE006004.1| Caulobacter crescentus CB15 section 330 of 359 of the complete genome
          Length = 14710

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 241  gccggccaagctgttccaggcctcg 265
            ||||||| |||||||||||||||||
Sbjct: 9904 gccggcccagctgttccaggcctcg 9928
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>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1486_E07
          Length = 110494

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 135   tggcgtctcccgcgtccccgccgcc 159
             |||||||||||||||||||| ||||
Sbjct: 32216 tggcgtctcccgcgtccccggcgcc 32192
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>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0461B08
          Length = 153743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 135    tggcgtctcccgcgtccccgccgcc 159
              |||||||||||||||||||| ||||
Sbjct: 113769 tggcgtctcccgcgtccccggcgcc 113745
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 35      acgcccccggccacgccgccgccgg 59
               ||||| |||||||||||||||||||
Sbjct: 2226651 acgccgccggccacgccgccgccgg 2226675



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 39      ccccggccacgccgccgccg 58
               ||||||||||||||||||||
Sbjct: 3005117 ccccggccacgccgccgccg 3005136
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>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 154442

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 281  ccgccgcagttcgagaaggca 301
            |||||||||||||||||||||
Sbjct: 4221 ccgccgcagttcgagaaggca 4241
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>emb|AL713929.5|CNS07YP6 Oryza sativa chromosome 12, . BAC OSJNBb0029H23 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 119798

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 281    ccgccgcagttcgagaaggca 301
              |||||||||||||||||||||
Sbjct: 116206 ccgccgcagttcgagaaggca 116226
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>ref|XM_466195.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1959

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  ccccggccacgccgccgccg 58
           ||||||||||||||||||||
Sbjct: 87  ccccggccacgccgccgccg 106
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>gb|AC093439.2| Drosophila melanogaster clone BACR28A12, complete sequence
          Length = 186444

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 311    acggatggatcggcgtttgg 330
              ||||||||||||||||||||
Sbjct: 164453 acggatggatcggcgtttgg 164434
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>ref|XM_425745.1| PREDICTED: Gallus gallus similar to Carbonic anhydrase VI precursor
           (Carbonate dehydratase VI) (CA-VI) (Secreted carbonic
           anhydrase) (Salivary carbonic anhydrase) (LOC428187),
           mRNA
          Length = 1836

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 255 tccaggcctcgccagtgcaggtgc 278
           |||||||||| |||||||||||||
Sbjct: 533 tccaggcctccccagtgcaggtgc 510
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>emb|AL162375.24| Human DNA sequence from clone RP11-282D2 on chromosome 13 Contains the
             5' end of a novel gene, 5 miR-precursor-13-micro RNAs and
             a CpG island, complete sequence
          Length = 24728

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    ccccggccacgccgccgccg 58
             ||||||||||||||||||||
Sbjct: 20412 ccccggccacgccgccgccg 20393
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>gb|AE012412.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 320
           of 460 of the complete genome
          Length = 10183

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  cggccacgccgccgccggtg 61
           ||||||||||||||||||||
Sbjct: 917 cggccacgccgccgccggtg 898
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>ref|NM_135739.2| Drosophila melanogaster CG5781-RA (CG5781), mRNA
          Length = 1349

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 311  acggatggatcggcgtttgg 330
            ||||||||||||||||||||
Sbjct: 1148 acggatggatcggcgtttgg 1167
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>gb|AE009813.1|AE009813 Pyrobaculum aerophilum strain IM2 section 68 of 201 of the complete
            genome
          Length = 11369

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 286  gcagttcgagaaggcagagg 305
            ||||||||||||||||||||
Sbjct: 2947 gcagttcgagaaggcagagg 2928
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 32      atcacgcccccggccacgccgccg 55
               |||||||| |||||||||||||||
Sbjct: 3388735 atcacgccgccggccacgccgccg 3388758
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>gb|S76408.1| mcenA=endo-beta-1,4-glucanase [Micromonospora cellulolyticum, 86W-16,
            Genomic, 1621 nt]
          Length = 1621

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 36   cgcccccggccacgccgccgccgg 59
            |||||||| |||||||||||||||
Sbjct: 1249 cgcccccgaccacgccgccgccgg 1272
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>emb|BX931211.1| Gallus gallus finished cDNA, clone ChEST593n22
          Length = 1139

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 255 tccaggcctcgccagtgcaggtgc 278
           |||||||||| |||||||||||||
Sbjct: 920 tccaggcctccccagtgcaggtgc 943
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>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0470G10
          Length = 145419

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     ccccggccacgccgccgccg 58
              ||||||||||||||||||||
Sbjct: 104752 ccccggccacgccgccgccg 104733
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>dbj|AK072252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H21, full
           insert sequence
          Length = 1961

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  ccccggccacgccgccgccg 58
           ||||||||||||||||||||
Sbjct: 87  ccccggccacgccgccgccg 106
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>emb|CR628369.8| Zebrafish DNA sequence from clone DKEY-165L8 in linkage group 19,
             complete sequence
          Length = 70115

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   ttttccacccctaattccactcct 127
             ||||||||||||||| ||||||||
Sbjct: 63373 ttttccacccctaataccactcct 63396
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>gb|AE003637.3| Drosophila melanogaster chromosome 2L, section 46 of 83 of the complete
             sequence
          Length = 222787

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   acggatggatcggcgtttgg 330
             ||||||||||||||||||||
Sbjct: 52882 acggatggatcggcgtttgg 52863
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>gb|AC005891.1|AC005891 Drosophila melanogaster, chromosome 2L, region 33F3-34A2, P1 clones
             DS08479 and DS07153, complete sequence
          Length = 136933

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   acggatggatcggcgtttgg 330
             ||||||||||||||||||||
Sbjct: 12856 acggatggatcggcgtttgg 12837


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,066,620
Number of Sequences: 3902068
Number of extensions: 3066620
Number of successful extensions: 71267
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70155
Number of HSP's gapped (non-prelim): 1111
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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