ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast40c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483231.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1496 Score = 186 bits (94), Expect = 4e-44 Identities = 151/170 (88%) Strand = Plus / Plus Query: 2 gaccgtgtcttctccccggccgccatacgcttctacatcgccgagaccgtgtccgcgctc 61 ||||| |||||||||||||| || |||||||||||| ||||||||| |||||||||||| Sbjct: 322 gaccgcgtcttctccccggcggcgatacgcttctacgtcgccgagatcgtgtccgcgctg 381 Query: 62 gccgacctccacgcctccggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctc 121 ||| |||||||| || ||| | | |||||||||||||||||| || |||||||||||| Sbjct: 382 tgcgagctccacgcgtcgggcgtggcgtaccgcgacctcaagcccgagaacgtgctcctc 441 Query: 122 cgagccgacggccatgttaccctcaccgacttcgacctctcgcgcctcct 171 || |||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 442 cgcgccgacggccatgtcaccctcaccgacttcgacctctcccgcctcct 491 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 376 cgagctgcccaagaagaccaagtcggcgcgcgtgtc 411 ||||||| |||||||| ||||||||||||| ||||| Sbjct: 699 cgagctgtccaagaaggccaagtcggcgcgggtgtc 734
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 186 bits (94), Expect = 4e-44 Identities = 151/170 (88%) Strand = Plus / Plus Query: 2 gaccgtgtcttctccccggccgccatacgcttctacatcgccgagaccgtgtccgcgctc 61 ||||| |||||||||||||| || |||||||||||| ||||||||| |||||||||||| Sbjct: 24958932 gaccgcgtcttctccccggcggcgatacgcttctacgtcgccgagatcgtgtccgcgctg 24958991 Query: 62 gccgacctccacgcctccggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctc 121 ||| |||||||| || ||| | | |||||||||||||||||| || |||||||||||| Sbjct: 24958992 tgcgagctccacgcgtcgggcgtggcgtaccgcgacctcaagcccgagaacgtgctcctc 24959051 Query: 122 cgagccgacggccatgttaccctcaccgacttcgacctctcgcgcctcct 171 || |||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 24959052 cgcgccgacggccatgtcaccctcaccgacttcgacctctcccgcctcct 24959101 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 376 cgagctgcccaagaagaccaagtcggcgcgcgtgtc 411 ||||||| |||||||| ||||||||||||| ||||| Sbjct: 24959309 cgagctgtccaagaaggccaagtcggcgcgggtgtc 24959344
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 186 bits (94), Expect = 4e-44 Identities = 151/170 (88%) Strand = Plus / Plus Query: 2 gaccgtgtcttctccccggccgccatacgcttctacatcgccgagaccgtgtccgcgctc 61 ||||| |||||||||||||| || |||||||||||| ||||||||| |||||||||||| Sbjct: 15048 gaccgcgtcttctccccggcggcgatacgcttctacgtcgccgagatcgtgtccgcgctg 15107 Query: 62 gccgacctccacgcctccggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctc 121 ||| |||||||| || ||| | | |||||||||||||||||| || |||||||||||| Sbjct: 15108 tgcgagctccacgcgtcgggcgtggcgtaccgcgacctcaagcccgagaacgtgctcctc 15167 Query: 122 cgagccgacggccatgttaccctcaccgacttcgacctctcgcgcctcct 171 || |||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 15168 cgcgccgacggccatgtcaccctcaccgacttcgacctctcccgcctcct 15217 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 376 cgagctgcccaagaagaccaagtcggcgcgcgtgtc 411 ||||||| |||||||| ||||||||||||| ||||| Sbjct: 15425 cgagctgtccaagaaggccaagtcggcgcgggtgtc 15460
>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_H03 Length = 135914 Score = 186 bits (94), Expect = 4e-44 Identities = 151/170 (88%) Strand = Plus / Plus Query: 2 gaccgtgtcttctccccggccgccatacgcttctacatcgccgagaccgtgtccgcgctc 61 ||||| |||||||||||||| || |||||||||||| ||||||||| |||||||||||| Sbjct: 60647 gaccgcgtcttctccccggcggcgatacgcttctacgtcgccgagatcgtgtccgcgctg 60706 Query: 62 gccgacctccacgcctccggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctc 121 ||| |||||||| || ||| | | |||||||||||||||||| || |||||||||||| Sbjct: 60707 tgcgagctccacgcgtcgggcgtggcgtaccgcgacctcaagcccgagaacgtgctcctc 60766 Query: 122 cgagccgacggccatgttaccctcaccgacttcgacctctcgcgcctcct 171 || |||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 60767 cgcgccgacggccatgtcaccctcaccgacttcgacctctcccgcctcct 60816 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 376 cgagctgcccaagaagaccaagtcggcgcgcgtgtc 411 ||||||| |||||||| ||||||||||||| ||||| Sbjct: 61024 cgagctgtccaagaaggccaagtcggcgcgggtgtc 61059
>dbj|AK069460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022B21, full insert sequence Length = 1496 Score = 186 bits (94), Expect = 4e-44 Identities = 151/170 (88%) Strand = Plus / Plus Query: 2 gaccgtgtcttctccccggccgccatacgcttctacatcgccgagaccgtgtccgcgctc 61 ||||| |||||||||||||| || |||||||||||| ||||||||| |||||||||||| Sbjct: 322 gaccgcgtcttctccccggcggcgatacgcttctacgtcgccgagatcgtgtccgcgctg 381 Query: 62 gccgacctccacgcctccggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctc 121 ||| |||||||| || ||| | | |||||||||||||||||| || |||||||||||| Sbjct: 382 tgcgagctccacgcgtcgggcgtggcgtaccgcgacctcaagcccgagaacgtgctcctc 441 Query: 122 cgagccgacggccatgttaccctcaccgacttcgacctctcgcgcctcct 171 || |||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 442 cgcgccgacggccatgtcaccctcaccgacttcgacctctcccgcctcct 491 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 376 cgagctgcccaagaagaccaagtcggcgcgcgtgtc 411 ||||||| |||||||| ||||||||||||| ||||| Sbjct: 699 cgagctgtccaagaaggccaagtcggcgcgggtgtc 734
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 137 bits (69), Expect = 3e-29 Identities = 138/161 (85%) Strand = Plus / Plus Query: 2 gaccgtgtcttctccccggccgccatacgcttctacatcgccgagaccgtgtccgcgctc 61 ||||| ||||||||||| || ||||| | |||||| |||||||| ||| ||||||||| Sbjct: 18601113 gaccgcgtcttctcccccgcggccatcaggttctacgtcgccgagctcgtctccgcgctc 18601172 Query: 62 gccgacctccacgcctccggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctc 121 ||||| ||||||||| |||| || | |||||||||||||||||| || ||||| |||||| Sbjct: 18601173 gccgagctccacgccgccgggattgcgtaccgcgacctcaagcccgagaacgtcctcctc 18601232 Query: 122 cgagccgacggccatgttaccctcaccgacttcgacctctc 162 || ||||||||||| || || || ||||||||||||||||| Sbjct: 18601233 cgcgccgacggccacgtcacgctgaccgacttcgacctctc 18601273
>dbj|AK105294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-G10, full insert sequence Length = 1721 Score = 121 bits (61), Expect = 2e-24 Identities = 137/161 (85%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 2 gaccgtgtcttctccccggccgccatacgcttctacatcgccgagaccgtgtccgcgctc 61 ||||| ||||||||||| || ||||| | |||||| |||||||| ||| ||||||||| Sbjct: 415 gaccgcgtcttctcccccgcggccatcaggttctacgtcgccgagctcgtctccgcgctc 474 Query: 62 gccgacctccacgcctccggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctc 121 ||||| ||||||||| |||| || | |||||||||||||||||| || ||||| |||||| Sbjct: 475 gccgagctccacgccgccgggattgcgtaccgcgacctcaagcccgagaacgtcctcctc 534 Query: 122 cgagccgacggccatgttaccctcaccgacttcgacctctc 162 | ||||||||||| || || || ||||||||||||||||| Sbjct: 535 c-tgccgacggccacgtcacgctgaccgacttcgacctctc 574
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgtt 139 |||||||||||||||||||||||||| || ||||||||| | || ||||||||||| | Sbjct: 8480 ggcatcgtgtaccgcgacctcaagccggagaacgtgctcatacgcgccgacggccacatc 8539 Query: 140 accctcaccgacttcgacctctcgc 164 | ||||||||||||||||| |||| Sbjct: 8540 atgctcaccgacttcgacctgtcgc 8564
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgtt 139 |||||||||||||||||||||||||| || ||||||||| | || ||||||||||| | Sbjct: 3566 ggcatcgtgtaccgcgacctcaagccggagaacgtgctcatacgcgccgacggccacatc 3507 Query: 140 accctcaccgacttcgacctctcgc 164 | ||||||||||||||||| |||| Sbjct: 3506 atgctcaccgacttcgacctgtcgc 3482
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgtt 139 |||||||||||||||||||||||||| || ||||||||| | || ||||||||||| | Sbjct: 24632294 ggcatcgtgtaccgcgacctcaagccggagaacgtgctcatacgcgccgacggccacatc 24632353 Query: 140 accctcaccgacttcgacctctcgc 164 | ||||||||||||||||| |||| Sbjct: 24632354 atgctcaccgacttcgacctgtcgc 24632378 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggcca 135 |||| |||||||||||||||||||||| || ||||| || ||||| | ||||||||| Sbjct: 8058842 cggcttcgtgtaccgcgacctcaagccggagaacgtcctgctccgcggcgacggcca 8058898 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 gcatcgtgtaccgcgacctcaagcc 105 |||||||| |||||||||||||||| Sbjct: 6514187 gcatcgtgcaccgcgacctcaagcc 6514163 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ttccaccgcggccaccgccg 246 |||||||||||||||||||| Sbjct: 10135884 ttccaccgcggccaccgccg 10135865
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgtt 139 |||||||||||||||||||||||||| || ||||||||| | || ||||||||||| | Sbjct: 64340 ggcatcgtgtaccgcgacctcaagccggagaacgtgctcatacgcgccgacggccacatc 64399 Query: 140 accctcaccgacttcgacctctcgc 164 | ||||||||||||||||| |||| Sbjct: 64400 atgctcaccgacttcgacctgtcgc 64424
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgtt 139 |||||||| ||||||||||||||||| || ||||| ||| |||| ||||||||||| | Sbjct: 26089575 ggcatcgtctaccgcgacctcaagcccgagaacgtcctcatccgcgccgacggccacatc 26089634 Query: 140 accctcaccgacttcgacctctcgc 164 | |||||||||||||||||||||| Sbjct: 26089635 atgctcaccgacttcgacctctcgc 26089659 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 82 catcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgttac 141 |||||||||||| ||||| ||||| || ||||||||| |||| ||||| ||||| | | Sbjct: 2443770 catcgtgtaccgtgacctgaagccggagaacgtgctcgtccgcgccgatggccacatcat 2443829 Query: 142 cctcaccgacttcgacctctcgc 164 |||||||||||||||||||||| Sbjct: 2443830 gctcaccgacttcgacctctcgc 2443852
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgtt 139 |||||||||||||||||||||||||| || ||||||||| | || ||||||||||| | Sbjct: 24549763 ggcatcgtgtaccgcgacctcaagccggagaacgtgctcatacgcgccgacggccacatc 24549822 Query: 140 accctcaccgacttcgacctctcgc 164 | ||||||||||||||||| |||| Sbjct: 24549823 atgctcaccgacttcgacctgtcgc 24549847 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggcca 135 |||| |||||||||||||||||||||| || ||||| || ||||| | ||||||||| Sbjct: 8056677 cggcttcgtgtaccgcgacctcaagccggagaacgtcctgctccgcggcgacggcca 8056733 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 gcatcgtgtaccgcgacctcaagcc 105 |||||||| |||||||||||||||| Sbjct: 6513400 gcatcgtgcaccgcgacctcaagcc 6513376 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ttccaccgcggccaccgccg 246 |||||||||||||||||||| Sbjct: 10134005 ttccaccgcggccaccgccg 10133986
>dbj|AK106290.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B02, full insert sequence Length = 1760 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgtt 139 |||||||| ||||||||||||||||| || ||||| ||| |||| ||||||||||| | Sbjct: 799 ggcatcgtctaccgcgacctcaagcccgagaacgtcctcatccgcgccgacggccacatc 858 Query: 140 accctcaccgacttcgacctctcgc 164 | |||||||||||||||||||||| Sbjct: 859 atgctcaccgacttcgacctctcgc 883
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgtt 139 |||||||| ||||||||||||||||| || ||||| ||| |||| ||||||||||| | Sbjct: 26017751 ggcatcgtctaccgcgacctcaagcccgagaacgtcctcatccgcgccgacggccacatc 26017810 Query: 140 accctcaccgacttcgacctctcgc 164 | |||||||||||||||||||||| Sbjct: 26017811 atgctcaccgacttcgacctctcgc 26017835 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 82 catcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgttac 141 |||||||||||| ||||| ||||| || ||||||||| |||| ||||| ||||| | | Sbjct: 2443714 catcgtgtaccgtgacctgaagccggagaacgtgctcgtccgcgccgatggccacatcat 2443773 Query: 142 cctcaccgacttcgacctctcgc 164 |||||||||||||||||||||| Sbjct: 2443774 gctcaccgacttcgacctctcgc 2443796
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgtt 139 |||||||| ||||||||||||||||| || ||||| ||| |||| ||||||||||| | Sbjct: 22096 ggcatcgtctaccgcgacctcaagcccgagaacgtcctcatccgcgccgacggccacatc 22037 Query: 140 accctcaccgacttcgacctctcgc 164 | |||||||||||||||||||||| Sbjct: 22036 atgctcaccgacttcgacctctcgc 22012
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 82 catcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgttac 141 |||||||||||| ||||| ||||| || ||||||||| |||| ||||||||||| | | Sbjct: 118770 catcgtgtaccgtgacctgaagccggagaacgtgctcgtccgcgccgacggccacatcat 118829 Query: 142 cctcaccgacttcgacctctcgc 164 |||||||||||||||||||||| Sbjct: 118830 gctcaccgacttcgacctctcgc 118852
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 82 catcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgttac 141 |||||||||||| ||||| ||||| || ||||||||| |||| ||||||||||| | | Sbjct: 2342771 catcgtgtaccgtgacctgaagccggagaacgtgctcgtccgcgccgacggccacatcat 2342830 Query: 142 cctcaccgacttcgacctctcgc 164 |||||||||||||||||||||| Sbjct: 2342831 gctcaccgacttcgacctctcgc 2342853
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 82 catcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgttac 141 |||||||||||| ||||| ||||| || ||||||||| |||| ||||||||||| | | Sbjct: 2350552 catcgtgtaccgtgacctgaagccggagaacgtgctcgtccgcgccgacggccacatcat 2350611 Query: 142 cctcaccgacttcgacctctcgc 164 |||||||||||||||||||||| Sbjct: 2350612 gctcaccgacttcgacctctcgc 2350634
>dbj|AK122055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114K20, full insert sequence Length = 1545 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 82 catcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgttac 141 |||||||||||| ||||| ||||| || ||||||||| |||| ||||| ||||| | | Sbjct: 201 catcgtgtaccgtgacctgaagccggagaacgtgctcgtccgcgccgatggccacatcat 260 Query: 142 cctcaccgacttcgacctctcgc 164 |||||||||||||||||||||| Sbjct: 261 gctcaccgacttcgacctctcgc 283
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122901 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 82 catcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggccatgttac 141 |||||||||||| ||||| ||||| || ||||||||| |||| ||||| ||||| | | Sbjct: 99722 catcgtgtaccgtgacctgaagccggagaacgtgctcgtccgcgccgatggccacatcat 99663 Query: 142 cctcaccgacttcgacctctcgc 164 |||||||||||||||||||||| Sbjct: 99662 gctcaccgacttcgacctctcgc 99640
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 83 atcgtgtaccgcgacctcaagccagaaaac 112 |||||||||||||||||||||||||||||| Sbjct: 28916 atcgtgtaccgcgacctcaagccagaaaac 28945
>ref|NM_209060.1| Eremothecium gossypii ADL389Wp (ADL389W), mRNA Length = 2136 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 83 atcgtgtaccgcgacctcaagccagaaaac 112 |||||||||||||||||||||||||||||| Sbjct: 1276 atcgtgtaccgcgacctcaagccagaaaac 1305
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgtgctcctccgagccgacggcca 135 |||| |||||||||||||||||||||| || ||||| || ||||| | ||||||||| Sbjct: 126205 cggcttcgtgtaccgcgacctcaagccggagaacgtcctgctccgcggcgacggcca 126261
>ref|XM_472969.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1389 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||||||||||||||||||||||| || ||||| Sbjct: 459 cggcatcgtgtaccgcgacctcaagccggagaacgt 494
>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete sequence Length = 141128 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||||||||||||||||||||||| || ||||| Sbjct: 109384 cggcatcgtgtaccgcgacctcaagccggagaacgt 109349
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||||||||||||||||||||||| || ||||| Sbjct: 24392973 cggcatcgtgtaccgcgacctcaagccggagaacgt 24392938 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 cctccgctggtggccaccccacca 278 ||||||||| |||||||||||||| Sbjct: 9405665 cctccgctgctggccaccccacca 9405688
>dbj|AK073224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C18, full insert sequence Length = 1465 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||||||||||||||||||||||| || ||||| Sbjct: 221 cggcatcgtgtaccgcgacctcaagccggagaacgt 256
>dbj|AK067266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098C22, full insert sequence Length = 1984 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||||||||||||||||||||||| || ||||| Sbjct: 569 cggcatcgtgtaccgcgacctcaagccggagaacgt 604
>ref|XM_464977.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1494 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 86 gtgtaccgcgacctcaagccagaaaacgtgctc 118 |||||||||||||||||||| || ||||||||| Sbjct: 664 gtgtaccgcgacctcaagccggagaacgtgctc 696
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 66 acctccacgcctccggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||||| | |||| |||||||||||||||||||||| || ||||| Sbjct: 23629567 acctccacggcctcggcgtcgtgtaccgcgacctcaagccggagaacgt 23629519 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 86 gtgtaccgcgacctcaagccagaaaacgtgctc 118 |||||||||||||||||||| || ||||||||| Sbjct: 10726064 gtgtaccgcgacctcaagccggagaacgtgctc 10726032 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||| | ||||| || ||||||||||||||||| Sbjct: 30156178 cggcatcatataccgtgatctcaagccagaaaacgt 30156213
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0018M09 Length = 157377 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 86 gtgtaccgcgacctcaagccagaaaacgtgctc 118 |||||||||||||||||||| || ||||||||| Sbjct: 143754 gtgtaccgcgacctcaagccggagaacgtgctc 143722
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 86 gtgtaccgcgacctcaagccagaaaacgtgctc 118 |||||||||||||||||||| || ||||||||| Sbjct: 65545 gtgtaccgcgacctcaagccggagaacgtgctc 65513
>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1669_F01 Length = 140019 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 66 acctccacgcctccggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||||| | |||| |||||||||||||||||||||| || ||||| Sbjct: 70667 acctccacggcctcggcgtcgtgtaccgcgacctcaagccggagaacgt 70619
>gb|L77498.1|AH013781S3 Homo sapiens rhodopsin kinase (RK) gene, exon 3 Length = 357 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Plus Query: 83 atcgtgtaccgcgacctcaagccagaaaacgtgct 117 ||||| ||||||||||||||||| || |||||||| Sbjct: 150 atcgtctaccgcgacctcaagcccgagaacgtgct 184
>ref|NM_002929.2| Homo sapiens G protein-coupled receptor kinase 1 (GRK1), mRNA Length = 2100 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Plus Query: 83 atcgtgtaccgcgacctcaagccagaaaacgtgct 117 ||||| ||||||||||||||||| || |||||||| Sbjct: 1045 atcgtctaccgcgacctcaagcccgagaacgtgct 1079
>ref|XM_589702.2| PREDICTED: Bos taurus similar to microtubule associated serine/threonine kinase 1 (LOC539825), mRNA Length = 3784 Score = 46.1 bits (23), Expect = 0.090 Identities = 26/27 (96%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagcc 105 |||||||||| |||||||||||||||| Sbjct: 456 cggcatcgtgcaccgcgacctcaagcc 482
>emb|BX537316.2| Human DNA sequence from clone WI2-86039E12 on chromosome 13, complete sequence Length = 24501 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Plus Query: 83 atcgtgtaccgcgacctcaagccagaaaacgtgct 117 ||||| ||||||||||||||||| || |||||||| Sbjct: 24431 atcgtctaccgcgacctcaagcccgagaacgtgct 24465
>gb|L77503.1| Homo sapiens rhodopsin kinase (RK) mRNA, complete cds Length = 1859 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Plus Query: 83 atcgtgtaccgcgacctcaagccagaaaacgtgct 117 ||||| ||||||||||||||||| || |||||||| Sbjct: 952 atcgtctaccgcgacctcaagcccgagaacgtgct 986
>gb|U63973.1|HSU63973 Human rhodopsin kinase mRNA, complete cds Length = 1952 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Plus Query: 83 atcgtgtaccgcgacctcaagccagaaaacgtgct 117 ||||| ||||||||||||||||| || |||||||| Sbjct: 1045 atcgtctaccgcgacctcaagcccgagaacgtgct 1079
>gb|AF145482.1|AF145482 Mesembryanthemum crystallinum putative serine/threonine protein kinase mRNA, complete cds Length = 2443 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Plus Query: 90 accgcgacctcaagccagaaaacgtgctcct 120 |||||||||||||||| |||||| ||||||| Sbjct: 1118 accgcgacctcaagcccgaaaacctgctcct 1148
>ref|XM_427115.1| PREDICTED: Gallus gallus similar to S6 kinase 2 (LOC429557), partial mRNA Length = 549 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||| | ||||| |||||||||||||||||| Sbjct: 315 cggcatcatctaccgtgacctcaagccagaaaac 348
>ref|XM_368319.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00925.4) partial mRNA Length = 1203 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||||||||||||||| |||||| Sbjct: 399 cggcatcgttcaccgcgacctcaagccggaaaac 432
>gb|BC027985.1| Homo sapiens microtubule associated serine/threonine kinase 1, mRNA (cDNA clone MGC:40229 IMAGE:4938605), complete cds Length = 3651 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagcc 105 ||||||||| |||||||||||||||| Sbjct: 320 ggcatcgtgcaccgcgacctcaagcc 345
>gb|AY605666.1| Chlamydomonas reinhardtii cGMP-dependent protein kinase (CPKG1) mRNA, complete cds Length = 3084 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagcc 105 |||||||||||||||||||| ||||| Sbjct: 2464 ggcatcgtgtaccgcgacctgaagcc 2489
>ref|NM_014975.1| Homo sapiens microtubule associated serine/threonine kinase 1 (MAST1), mRNA Length = 4833 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagcc 105 ||||||||| |||||||||||||||| Sbjct: 1513 ggcatcgtgcaccgcgacctcaagcc 1538
>emb|BX323876.21| Zebrafish DNA sequence from clone CH211-215J19 in linkage group 8, complete sequence Length = 218043 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 gcgacctcaagccagaaaacgtgctc 118 ||||| |||||||||||||||||||| Sbjct: 31620 gcgacatcaagccagaaaacgtgctc 31645 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 gcgacctcaagccagaaaacgtgctc 118 ||||| |||||||||||||||||||| Sbjct: 16633 gcgacatcaagccagaaaacgtgctc 16658
>gb|AC020934.9| Homo sapiens chromosome 19 clone CTD-2265O21, complete sequence Length = 119347 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagcc 105 ||||||||| |||||||||||||||| Sbjct: 99840 ggcatcgtgcaccgcgacctcaagcc 99865
>ref|XM_692076.1| PREDICTED: Danio rerio similar to pim-1 oncogene (LOC568728), mRNA Length = 1737 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 gcgacctcaagccagaaaacgtgctc 118 ||||| |||||||||||||||||||| Sbjct: 1190 gcgacatcaagccagaaaacgtgctc 1215
>gb|AD000092.1|CH19HHR23 Homo sapiens DNA from chromosome 19p13.2 cosmids R31240, R30272 and R28549 containing the EKLF, GCDH, CRTC, and RAD23A genes, genomic sequence Length = 110096 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagcc 105 ||||||||| |||||||||||||||| Sbjct: 11452 ggcatcgtgcaccgcgacctcaagcc 11477
>emb|BX323556.6| Zebrafish DNA sequence from clone CH211-278P7 in linkage group 8, complete sequence Length = 178137 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 gcgacctcaagccagaaaacgtgctc 118 ||||| |||||||||||||||||||| Sbjct: 108391 gcgacatcaagccagaaaacgtgctc 108416 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 gcgacctcaagccagaaaacgtgctc 118 ||||| |||||||||||||||||||| Sbjct: 93404 gcgacatcaagccagaaaacgtgctc 93429
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagcc 105 ||||||||| |||||||||||||||| Sbjct: 289230 ggcatcgtgcaccgcgacctcaagcc 289255
>dbj|AB023190.1| Homo sapiens mRNA for KIAA0973 protein, partial cds Length = 4833 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagcc 105 ||||||||| |||||||||||||||| Sbjct: 1513 ggcatcgtgcaccgcgacctcaagcc 1538
>ref|NM_187599.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 gcatcgtgtaccgcgacctcaagcc 105 |||||||| |||||||||||||||| Sbjct: 509 gcatcgtgcaccgcgacctcaagcc 533
>ref|XM_477515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 cctcctccccgtcaacgtcgcctcc 207 |||||||| |||||||||||||||| Sbjct: 479 cctcctcctcgtcaacgtcgcctcc 503
>ref|NM_017275.1| Rattus norvegicus pregnancy upregulated non-ubiquitously expressed CaM kinase (Pnck), mRNA Length = 1618 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||| ||||||||||| |||||| Sbjct: 605 ggcatcgtgcaccgggacctcaagcctgaaaac 637
>gb|BC060911.1| Danio rerio zgc:73155, mRNA (cDNA clone MGC:73155 IMAGE:4144191), complete cds Length = 2052 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaa 111 ||||||||| |||| ||||||||||||||||| Sbjct: 478 cggcatcgtccaccgagacctcaagccagaaaa 510
>ref|XM_865672.1| PREDICTED: Bos taurus similar to Calcium/calmodulin-dependent protein kinase type 1B (CaM kinase IB) (CaM kinase I beta) (CaMKI-beta) (CaM-KI beta) (Pregnancy up-regulated non-ubiquitously expressed CaM kinase homolog) (LOC614251), mRNA Length = 1350 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||| ||||||||||| |||||| Sbjct: 396 ggcatcgtgcaccgagacctcaagcctgaaaac 428
>gb|AC167683.2| Daphnia pulex clone JGIAZSN-5E1, complete sequence Length = 38548 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 accgcgacctcaagccagaaaacgt 114 |||| |||||||||||||||||||| Sbjct: 12267 accgtgacctcaagccagaaaacgt 12243
>gb|BC039230.1| Mus musculus microtubule associated serine/threonine kinase 1, mRNA (cDNA clone IMAGE:4527728), with apparent retained intron Length = 4855 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccaga 108 ||||||||| |||| |||||||||||||| Sbjct: 404 ggcatcgtgcaccgtgacctcaagccaga 432
>gb|BC055891.1| Mus musculus pregnancy upregulated non-ubiquitously expressed CaM kinase, mRNA (cDNA clone MGC:68193 IMAGE:4208888), complete cds Length = 1489 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||| ||||||||||| |||||| Sbjct: 421 ggcatcgtgcaccgggacctcaagcctgaaaac 453
>gb|DQ287938.1| Mesostigma viride root cap protein 3 mRNA, partial cds Length = 1159 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 369 ccgcccccgagctgcccaagaagac 393 ||||||||| ||||||||||||||| Sbjct: 35 ccgcccccgtgctgcccaagaagac 59
>ref|NM_012040.2| Mus musculus pregnancy upregulated non-ubiquitously expressed CaM kinase (Pnck), mRNA Length = 1554 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||| ||||||||||| |||||| Sbjct: 495 ggcatcgtgcaccgggacctcaagcctgaaaac 527
>gb|AC161765.5| Mus musculus BAC clone RP23-85I5 from chromosome 8, complete sequence Length = 219629 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 80 ggcatcgtgtaccgcgacctcaagccaga 108 ||||||||| |||| |||||||||||||| Sbjct: 188737 ggcatcgtgcaccgtgacctcaagccaga 188709
>ref|NM_031096.1| Rattus norvegicus G protein-coupled receptor kinase 1 (Grk1), mRNA Length = 2157 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 89 taccgcgacctcaagccagaaaacgtgct 117 ||||| |||||||||||||| |||||||| Sbjct: 1127 taccgtgacctcaagccagagaacgtgct 1155
>ref|XM_987160.1| PREDICTED: Mus musculus microtubule associated serine/threonine kinase 1 (Mast1), mRNA Length = 5077 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccaga 108 ||||||||| |||| |||||||||||||| Sbjct: 1675 ggcatcgtgcaccgtgacctcaagccaga 1703
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02, complete sequence Length = 162425 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 gcatcgtgtaccgcgacctcaagcc 105 |||||||| |||||||||||||||| Sbjct: 56949 gcatcgtgcaccgcgacctcaagcc 56925
>gb|BC054524.1| Mus musculus syntrophin associated serine/threonine kinase, mRNA (cDNA clone MGC:62208 IMAGE:6400705), complete cds Length = 4894 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccaga 108 ||||||||| |||| |||||||||||||| Sbjct: 1556 ggcatcgtgcaccgtgacctcaagccaga 1584
>gb|BC051996.1| Mus musculus pregnancy upregulated non-ubiquitously expressed CaM kinase, mRNA (cDNA clone IMAGE:5693661), partial cds Length = 1498 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||| ||||||||||| |||||| Sbjct: 428 ggcatcgtgcaccgggacctcaagcctgaaaac 460
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 tctacatcgccgagaccgtgtccgc 57 |||||||||||||||||||| |||| Sbjct: 1850877 tctacatcgccgagaccgtggccgc 1850853
>ref|XM_792472.1| PREDICTED: Strongylocentrotus purpuratus similar to checkpoint kinase 1 homolog (LOC592974), mRNA Length = 1278 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 cgcgacctcaagccagaaaacgtgctcct 120 ||||||||||| ||||||||| ||||||| Sbjct: 385 cgcgacctcaaaccagaaaacctgctcct 413
>ref|XM_778089.1| PREDICTED: Strongylocentrotus purpuratus similar to Serine/threonine-protein kinase VRK1 (Vaccinia-related kinase 1) (LOC577885), mRNA Length = 1422 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 376 cgagctgcccaagaagaccaagtcg 400 ||||||||||||| ||||||||||| Sbjct: 244 cgagctgcccaagtagaccaagtcg 268
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 69 tccacgcctccggcatcgtgtaccgcgacctcaagcc 105 |||||||| |||| ||||| |||||||||||||||| Sbjct: 83072 tccacgccgccgggatcgtccaccgcgacctcaagcc 83036
>emb|AJ272131.1|BBI272131 Bifidobacterium bifidum OLGA1 gene for beta-galactosidase Length = 3563 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 ccgtgcccgcggccgcgtcga 314 ||||||||||||||||||||| Sbjct: 2670 ccgtgcccgcggccgcgtcga 2650
>ref|NM_200829.1| Danio rerio zgc:73155 (zgc:73155), mRNA Length = 2052 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaa 111 ||||||||| |||| ||||||||||||||||| Sbjct: 478 cggcatcgtccaccgagacctcaagccagaaaa 510
>dbj|AK134665.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330520C09 product:pregnancy upregulated non-ubiquitously expressed CaM kinase, full insert sequence Length = 1492 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||| ||||||||||| |||||| Sbjct: 452 ggcatcgtgcaccgggacctcaagcctgaaaac 484
>dbj|AK141034.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230009I24 product:syntrophin associated serine/threonine kinase, full insert sequence Length = 2080 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccaga 108 ||||||||| |||| |||||||||||||| Sbjct: 1562 ggcatcgtgcaccgtgacctcaagccaga 1590
>ref|XM_697287.1| PREDICTED: Danio rerio hypothetical protein LOC554993 (LOC554993), mRNA Length = 2021 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaa 111 ||||||||| |||| ||||||||||||||||| Sbjct: 478 cggcatcgtccaccgagacctcaagccagaaaa 510
>dbj|AK158755.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230312H16 product:pregnancy upregulated non-ubiquitously expressed CaM kinase, full insert sequence Length = 1486 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||| ||||||||||| |||||| Sbjct: 446 ggcatcgtgcaccgggacctcaagcctgaaaac 478
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 cctcctccccgtcaacgtcgcctcc 207 |||||||| |||||||||||||||| Sbjct: 11167720 cctcctcctcgtcaacgtcgcctcc 11167744
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 375 ccgagctgcccaagaagaccaagtc 399 ||||||||| ||||||||||||||| Sbjct: 2200850 ccgagctgcacaagaagaccaagtc 2200826 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 gcgccgcccccgagctgccc 385 |||||||||||||||||||| Sbjct: 2250549 gcgccgcccccgagctgccc 2250568
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 283 cgagcgcgagcccgtgcccgcggcc 307 ||||| ||||||||||||||||||| Sbjct: 1185129 cgagcccgagcccgtgcccgcggcc 1185153
>gb|U63971.1|RNU63971 Rattus norvegicus rhodopsin kinase mRNA, complete cds Length = 2157 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 89 taccgcgacctcaagccagaaaacgtgct 117 ||||| |||||||||||||| |||||||| Sbjct: 1127 taccgtgacctcaagccagagaacgtgct 1155
>dbj|AK122411.1| Mus musculus mRNA for mKIAA0973 protein Length = 4509 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccaga 108 ||||||||| |||| |||||||||||||| Sbjct: 554 ggcatcgtgcaccgtgacctcaagccaga 582
>gb|AF181984.1|AF181984 Mus musculus pregnancy upregulated nonubiquitous Ca2+/calmodulin-dependent kinase Pnck mRNA, complete cds Length = 1554 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||| ||||||||||| |||||| Sbjct: 495 ggcatcgtgcaccgggacctcaagcctgaaaac 527
>dbj|AK104423.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E09, full insert sequence Length = 1319 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 gcatcgtgtaccgcgacctcaagcc 105 |||||||| |||||||||||||||| Sbjct: 573 gcatcgtgcaccgcgacctcaagcc 597
>dbj|AK070170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041A11, full insert sequence Length = 1329 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 gcatcgtgtaccgcgacctcaagcc 105 |||||||| |||||||||||||||| Sbjct: 576 gcatcgtgcaccgcgacctcaagcc 600
>dbj|AP004398.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0438G07 Length = 138878 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 cctcctccccgtcaacgtcgcctcc 207 |||||||| |||||||||||||||| Sbjct: 7696 cctcctcctcgtcaacgtcgcctcc 7720
>gb|AF077818.1|AF077818 Mus musculus syntrophin-associated serine-threonine protein kinase mRNA, complete cds Length = 4860 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccaga 108 ||||||||| |||| |||||||||||||| Sbjct: 1539 ggcatcgtgcaccgtgacctcaagccaga 1567
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 283 cgagcgcgagcccgtgcccgcggcc 307 ||||| ||||||||||||||||||| Sbjct: 860035 cgagcccgagcccgtgcccgcggcc 860059
>ref|NM_019945.1| Mus musculus microtubule associated serine/threonine kinase 1 (Mast1), mRNA Length = 4860 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccaga 108 ||||||||| |||| |||||||||||||| Sbjct: 1539 ggcatcgtgcaccgtgacctcaagccaga 1567
>dbj|D86556.1| Rattus norvegicus mRNA for Protein Kinase, complete cds Length = 1332 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||| ||||||||||| |||||| Sbjct: 456 ggcatcgtgcaccgggacctcaagcctgaaaac 488
>dbj|AB004267.1| Rattus norvegicus mRNA for Ca2+/calmodulin-dependent protein kinase I beta 2, complete cds Length = 1618 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||| ||||||||||| |||||| Sbjct: 605 ggcatcgtgcaccgggacctcaagcctgaaaac 637
>dbj|AB023027.1| Mus musculus mCaMK1-beta2 mRNA, complete cds Length = 1032 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 80 ggcatcgtgtaccgcgacctcaagccagaaaac 112 ||||||||| |||| ||||||||||| |||||| Sbjct: 391 ggcatcgtgcaccgggacctcaagcctgaaaac 423
>ref|XM_467557.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2182 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||| | ||||| || ||||||||||||||||| Sbjct: 1210 cggcatcatataccgtgatctcaagccagaaaacgt 1245
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 cgcgagcccgtgcccgcggccgcg 310 ||||||||||||| |||||||||| Sbjct: 2926328 cgcgagcccgtgcgcgcggccgcg 2926305
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 ccgcggccgcgtcgacgccgaagc 323 |||||||||||||| ||||||||| Sbjct: 3713488 ccgcggccgcgtcgccgccgaagc 3713511
>ref|NM_001031841.1| Danio rerio G-protein-coupled receptor kinase 7a (grk7a), mRNA Length = 1789 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 82 catcgtgtaccgcgacctcaagccagaaaacgtgct 117 |||||||||||| ||| | |||||||| |||||||| Sbjct: 993 catcgtgtaccgtgacatgaagccagagaacgtgct 1028
>ref|XM_847172.1| PREDICTED: Canis familiaris hypothetical protein LOC609829 (LOC609829), mRNA Length = 4677 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 agcgcgagcgcgagcccgtgcccg 302 |||||||||||||||||| ||||| Sbjct: 3887 agcgcgagcgcgagcccgagcccg 3910
>gb|AY900004.1| Danio rerio G-protein-coupled receptor kinase 7a (grk7a) mRNA, complete cds Length = 1789 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 82 catcgtgtaccgcgacctcaagccagaaaacgtgct 117 |||||||||||| ||| | |||||||| |||||||| Sbjct: 993 catcgtgtaccgtgacatgaagccagagaacgtgct 1028
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 cgcgagcccgtgcccgcggccgcg 310 ||||||||||||| |||||||||| Sbjct: 1104856 cgcgagcccgtgcgcgcggccgcg 1104833
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 ccgcggccgcgtcgacgccgaagc 323 |||||||||||||| ||||||||| Sbjct: 3453794 ccgcggccgcgtcgccgccgaagc 3453817
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gtccgcgctcgccgacctcc 71 |||||||||||||||||||| Sbjct: 205650 gtccgcgctcgccgacctcc 205669
>emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C12, complete sequence Length = 138715 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 cctccgctggtggccaccccacca 278 ||||||||| |||||||||||||| Sbjct: 3786 cctccgctgctggccaccccacca 3809
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 78 ccggcatcgtgtaccgcgacctcaagcc 105 |||| |||||| |||||||||||||||| Sbjct: 1119549 ccgggatcgtgcaccgcgacctcaagcc 1119522
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ttccaccgcggccaccgccg 246 |||||||||||||||||||| Sbjct: 81505 ttccaccgcggccaccgccg 81486
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tctacatcgccgagaccgtg 52 |||||||||||||||||||| Sbjct: 1705471 tctacatcgccgagaccgtg 1705452
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 cgcgagcccgtgcccgcggccgcg 310 ||||||||||||| |||||||||| Sbjct: 699499 cgcgagcccgtgcgcgcggccgcg 699476
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 ccgcgctcgccgacctccac 73 |||||||||||||||||||| Sbjct: 5899579 ccgcgctcgccgacctccac 5899560
>ref|XM_219966.3| PREDICTED: Rattus norvegicus programmed cell death protein 11 (predicted) (Pdcd11_predicted), mRNA Length = 5921 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gcagcagcttcagaacctgg 341 |||||||||||||||||||| Sbjct: 1786 gcagcagcttcagaacctgg 1767
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||| | ||||| || ||||||||||||||||| Sbjct: 135775 cggcatcatataccgtgatctcaagccagaaaacgt 135810
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07 Length = 93240 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||| | ||||| || ||||||||||||||||| Sbjct: 28882 cggcatcatataccgtgatctcaagccagaaaacgt 28917
>gb|AE005026.1| Halobacterium sp. NRC-1 section 57 of 170 of the complete genome Length = 15355 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 cgcgctcgccgacctccacg 74 |||||||||||||||||||| Sbjct: 3348 cgcgctcgccgacctccacg 3367
>gb|AY943953.1| Streptomyces sp. FQ1 plasmid pFP1, complete sequence Length = 39360 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ccgcccccgagctgcccaag 388 |||||||||||||||||||| Sbjct: 27286 ccgcccccgagctgcccaag 27305
>gb|AC022517.1|AC022517 Homo sapiens chromosome 19, BC335474 (CIT-HSPC_482H14), complete sequence Length = 157566 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 cggcgccgcccccgagctgc 383 |||||||||||||||||||| Sbjct: 108791 cggcgccgcccccgagctgc 108810
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cgctcgccgacctccacgcc 76 |||||||||||||||||||| Sbjct: 3649245 cgctcgccgacctccacgcc 3649264
>dbj|AK065888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J15, full insert sequence Length = 2181 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 79 cggcatcgtgtaccgcgacctcaagccagaaaacgt 114 ||||||| | ||||| || ||||||||||||||||| Sbjct: 1209 cggcatcatataccgtgatctcaagccagaaaacgt 1244 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,595,051 Number of Sequences: 3902068 Number of extensions: 2595051 Number of successful extensions: 66485 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63112 Number of HSP's gapped (non-prelim): 3354 length of query: 416 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 394 effective length of database: 17,147,199,772 effective search space: 6755996710168 effective search space used: 6755996710168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
