ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast40b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AVT1_YEAST (P47082) Vacuolar amino acid transporter 1 39 0.008
2DPOL_HBVYW (P03156) P protein [Includes: DNA-directed DNA polyme... 34 0.16
3DPOL_HBVIA (P24024) P protein [Includes: DNA-directed DNA polyme... 34 0.16
4DPOL_HBVAY (P03155) P protein [Includes: DNA-directed DNA polyme... 34 0.16
5DPOL_HBVA4 (Q05486) P protein [Includes: DNA-directed DNA polyme... 32 0.78
6S36A1_HUMAN (Q7Z2H8) Proton-coupled amino acid transporter 1 (Pr... 32 1.0
7DPOL_HBVDR (P03157) P protein [Includes: DNA-directed DNA polyme... 31 1.3
8DPOL_HBVD4 (P12933) P protein [Includes: DNA-directed DNA polyme... 31 1.3
9DPOL_HBVWO (P17395) P protein [Includes: DNA-directed DNA polyme... 30 2.3
10DPOL_HBVW9 (P17100) P protein [Includes: DNA-directed DNA polyme... 30 2.3
11DPOL_HBVW2 (P03159) P protein [Includes: DNA-directed DNA polyme... 30 2.3
12AVT7_YEAST (P40501) Vacuolar amino acid transporter 7 30 2.3
13DPOL_HBVWP (Q02314) P protein [Includes: DNA-directed DNA polyme... 30 2.3
14S36A1_RAT (Q924A5) Proton-coupled amino acid transporter 1 (Prot... 30 2.9
15S36A1_MOUSE (Q8K4D3) Proton-coupled amino acid transporter 1 (Pr... 30 2.9
16DPOL_HBVWI (P17393) P protein [Includes: DNA-directed DNA polyme... 30 3.8
17DPOL_HBVWJ (P17394) P protein [Includes: DNA-directed DNA polyme... 29 5.0
18LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2 29 5.0
19HBT1_YEAST (Q07653) Protein HBT1 (HUB1 target protein 1) 29 5.0
20STP4_ARATH (Q39228) Sugar transport protein 4 (Hexose transporte... 29 5.0
21TRA_STRLI (P22409) Protein tra 29 6.6
22SP7_MOUSE (Q8VI67) Transcription factor Sp7 (Zinc finger protein... 28 8.6
23LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like ... 28 8.6
24PCBB_PROMM (Q7V6U4) Divinyl chlorophyll a/b light-harvesting pro... 28 8.6
25PCBE_PROMA (Q9L8M2) Divinyl chlorophyll a/b light-harvesting pro... 28 8.6
26HOXN_RALEU (P23516) High-affinity nickel transport protein 28 8.6
27Y1709_RALSO (Q8XYP9) UPF0209 protein RSc1709 28 8.6 
>AVT1_YEAST (P47082) Vacuolar amino acid transporter 1|
          Length = 602

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +3

Query: 189 ITGVIGAGVLALSWSVAQLGWVAGPVAMVCFAAVTYVSAVLLSHC 323
           I  +IG G+LAL   +   GWV G   +  FA  T+ +A LLS C
Sbjct: 218 INVLIGIGLLALPLGLKYAGWVIGLTMLAIFALATFCTAELLSRC 262
to top
>DPOL_HBVYW (P03156) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 832

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -2

Query: 286 AAKQTMATGPATQPSCATLH-ESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAAR 110
           AA  T    PA  P  A +  + A T +P     +C  +++ +PV   RP      A A 
Sbjct: 632 AAPFTQCGYPALMPLYACIQSKQAFTFSPTYKAFLCKQYLNLYPVARQRPGLCQVFADAT 691

Query: 109 PKGWG 95
           P GWG
Sbjct: 692 PTGWG 696
to top
>DPOL_HBVIA (P24024) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 832

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -2

Query: 286 AAKQTMATGPATQPSCATLH-ESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAAR 110
           AA  T    PA  P  A +  + A T +P     +C  +++ +PV   RP      A A 
Sbjct: 632 AAPFTQCGYPALMPLYACIQSKQAFTFSPTYKAFLCKQYLNLYPVARQRPGLCQVFADAT 691

Query: 109 PKGWG 95
           P GWG
Sbjct: 692 PTGWG 696
to top
>DPOL_HBVAY (P03155) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)] (Fragment)
          Length = 750

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -2

Query: 286 AAKQTMATGPATQPSCATLH-ESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAAR 110
           AA  T    PA  P  A +  + A T +P     +C  +++ +PV   RP      A A 
Sbjct: 632 AAPFTQCGYPALMPLYACIQSKQAFTFSPTYKAFLCKQYLNLYPVAEQRPGLCQVFADAT 691

Query: 109 PKGWG 95
           P GWG
Sbjct: 692 PTGWG 696
to top
>DPOL_HBVA4 (Q05486) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 843

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -2

Query: 286 AAKQTMATGPATQP--SCATLHESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAA 113
           AA  T    PA  P  +C T  + A   +P     +C  +++ +PV   RP      A A
Sbjct: 643 AAPFTQCGYPALMPLYACITAKQ-AFVFSPTYKAFLCKQYMNLYPVARQRPGLCQVFADA 701

Query: 112 RPKGWG 95
            P GWG
Sbjct: 702 TPTGWG 707
to top
>S36A1_HUMAN (Q7Z2H8) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
          Length = 476

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 183 HIITGVIGAGVLALSWSVAQLGWVAGPVAMVCFAAVTYVSAVLLSHC 323
           H++ G IG G+L L  +V   G V GP++++    V      +L  C
Sbjct: 55  HLLKGNIGTGLLGLPLAVKNAGIVMGPISLLIIGIVAVHCMGILVKC 101
to top
>DPOL_HBVDR (P03157) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 843

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -2

Query: 286 AAKQTMATGPATQPSCATLH-ESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAAR 110
           AA  T    PA  P  A +  + A T +P     +C  +++ +PV   R       A A 
Sbjct: 643 AAPFTQCGYPALMPLYACIQSKQAFTFSPTYKAFLCKQYLNLYPVARQRSGLCQVFADAT 702

Query: 109 PKGWG 95
           P GWG
Sbjct: 703 PTGWG 707
to top
>DPOL_HBVD4 (P12933) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 730

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -2

Query: 286 AAKQTMATGPATQPSCATLH-ESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAAR 110
           AA  T    PA  P  A +  + A T +P     +C  +++ +PV   R       A A 
Sbjct: 643 AAPFTQCGYPALMPLYACIQSKQAFTFSPTYKAFLCKQYLNLYPVARQRSGLCQVFADAT 702

Query: 109 PKGWG 95
           P GWG
Sbjct: 703 PTGWG 707
to top
>DPOL_HBVWO (P17395) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 843

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -2

Query: 286 AAKQTMATGPATQPSCATLH-ESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAAR 110
           AA  T    PA  P  A +  + A T +P     +   +++ +PV   RP      A A 
Sbjct: 643 AAPFTQCGYPALMPLYACIQAKQAFTFSPTYKAFLTKQYLNLYPVARQRPGLCQVFADAT 702

Query: 109 PKGWG 95
           P GWG
Sbjct: 703 PTGWG 707
to top
>DPOL_HBVW9 (P17100) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 845

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -2

Query: 286 AAKQTMATGPATQPSCATLH-ESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAAR 110
           AA  T    PA  P  A +  + A T +P     +   +++ +PV   RP      A A 
Sbjct: 645 AAPFTQCGYPALMPLYACIQAKQAFTFSPTYKAFLSKQYMNLYPVARQRPGLCQVFADAT 704

Query: 109 PKGWG 95
           P GWG
Sbjct: 705 PTGWG 709
to top
>DPOL_HBVW2 (P03159) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 845

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -2

Query: 286 AAKQTMATGPATQPSCATLH-ESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAAR 110
           AA  T    PA  P  A +  + A T +P     +   +++ +PV   RP      A A 
Sbjct: 645 AAPFTQCGYPALMPLYACIQAKQAFTFSPTYKAFLSKQYMNLYPVARQRPGLCQVFADAT 704

Query: 109 PKGWG 95
           P GWG
Sbjct: 705 PTGWG 709
to top
>AVT7_YEAST (P40501) Vacuolar amino acid transporter 7|
          Length = 490

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 14/59 (23%), Positives = 31/59 (52%)
 Frame = +3

Query: 156 TGNLWTCVAHIITGVIGAGVLALSWSVAQLGWVAGPVAMVCFAAVTYVSAVLLSHCYRS 332
           T +  +  A+++  ++GAG LA+ +S    G + G +  +  A  + +   +LS C ++
Sbjct: 4   TSSALSSTANLVKTIVGAGTLAIPYSFKSDGVLVGVILTLLAAVTSGLGLFVLSKCSKT 62
to top
>DPOL_HBVWP (Q02314) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 763

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -2

Query: 286 AAKQTMATGPATQPSCATLH-ESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAAR 110
           AA  T    PA  P  A +  + A T +P     +   +++ +PV   RP      A A 
Sbjct: 645 AAPFTQCGYPALMPLYACIQAKQAFTFSPTYKAFLSKQYMNLYPVARQRPGLCQVFADAT 704

Query: 109 PKGWG 95
           P GWG
Sbjct: 705 PTGWG 709
to top
>S36A1_RAT (Q924A5) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
           (Lysosomal amino acid transporter 1) (LYAAT-1) (Neutral
           amino acid/proton symporter)
          Length = 475

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +3

Query: 183 HIITGVIGAGVLALSWSVAQLGWVAGPVAMVCFAAVTYVSAVLLSHC 323
           H++ G IG G+L L  +V   G + GP++++    V      +L  C
Sbjct: 54  HLLKGNIGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCMGILVKC 100
to top
>S36A1_MOUSE (Q8K4D3) Proton-coupled amino acid transporter 1 (Proton/amino acid|
           transporter 1) (Solute carrier family 36 member 1)
          Length = 475

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +3

Query: 183 HIITGVIGAGVLALSWSVAQLGWVAGPVAMVCFAAVTYVSAVLLSHC 323
           H++ G IG G+L L  +V   G + GP++++    V      +L  C
Sbjct: 54  HLLKGNIGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCMGILVKC 100
to top
>DPOL_HBVWI (P17393) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 843

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -2

Query: 286 AAKQTMATGPATQPSCATLH-ESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAAR 110
           AA  T    PA  P  A +  + A T +P     +   +++ +PV   RP      A A 
Sbjct: 643 AAPFTQCGYPALMPLYACIQAKQAFTFSPTYKAFLNKQYLNLYPVARQRPGLCQVFADAT 702

Query: 109 PKGWG 95
           P GWG
Sbjct: 703 PTGWG 707
to top
>DPOL_HBVWJ (P17394) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 843

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = -2

Query: 286 AAKQTMATGPATQPSCATLH-ESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAAR 110
           AA  T    PA  P  A +  + A T +P     +   ++  +PV   RP      A A 
Sbjct: 643 AAPFTQCGYPALMPLYACIQAKQAFTFSPTYKAFLSKQYMTLYPVARQRPGLCQVFADAT 702

Query: 109 PKGWG 95
           P GWG
Sbjct: 703 PTGWG 707
to top
>LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2|
          Length = 482

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
 Frame = +3

Query: 117 AAPELDDDGRVARTGNLW----------TCVAHIITGVIGAGVLALSWSVAQLGWVAGPV 266
           AA  ++ DG+ + T  LW          +C ++ +  V+    L L +S +QLG ++G +
Sbjct: 25  AAMGVEQDGKFSMTSLLWHGGSVWDAWFSCASNQVAQVL----LTLPYSFSQLGMLSGLL 80

Query: 267 AMVCFAAVTYVSAVLLSHCY 326
             V +  +   +A L+S  Y
Sbjct: 81  LQVFYGLMGSWTAYLISVLY 100
to top
>HBT1_YEAST (Q07653) Protein HBT1 (HUB1 target protein 1)|
          Length = 1046

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = -2

Query: 262 GPATQPSCATLHESASTPAPMTPVMMCATHVHRFPVRATRPXXXXSGAAA 113
           G A  PS AT H  +++ A  +PV    TH H      T P     G A+
Sbjct: 168 GDAGHPSIATTHNHSTSKAATSPV----THTHGHSSATTSPVTHTHGHAS 213
to top
>STP4_ARATH (Q39228) Sugar transport protein 4 (Hexose transporter 4)|
          Length = 514

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 147 VARTGNLWTCVAHIITGVIGAGVLALSWSVAQLGWV 254
           VA TGN+    A++I  +I   V   +WS   LGW+
Sbjct: 374 VAGTGNIGKSDANLIVALICIYVAGFAWSWGPLGWL 409
to top
>TRA_STRLI (P22409) Protein tra|
          Length = 621

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 180 AHIITGVIGAGVLALSWSVAQLGWVAGPVAMV 275
           AH +  V GAG+ AL W  A    VAG +A++
Sbjct: 106 AHAMHAVPGAGISALGWDQAGAWPVAGSLALI 137
to top
>SP7_MOUSE (Q8VI67) Transcription factor Sp7 (Zinc finger protein osterix)|
           (C22)
          Length = 428

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 6/73 (8%)
 Frame = -2

Query: 274 TMATGPATQPSCATLHESASTPAPMTPVMMCATHV------HRFPVRATRPXXXXSGAAA 113
           T++TGPA  P    L    S  AP+ P    A H+      H  P    +P    +    
Sbjct: 178 TLSTGPAQPPLNPQLPTYPSDFAPLNPAPYPAPHLLQPGPQHVLPQDVYKPKAVGNSGQL 237

Query: 112 RPKGWGWPPRCEG 74
              G   PPR  G
Sbjct: 238 EGSGAAKPPRGAG 250
to top
>LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like protein 4)|
           (MtLAX4)
          Length = 482

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +3

Query: 159 GNLWTCVAHIITGVIGAGVLALSWSVAQLGWVAGPVAMVCFAAVTYVSAVLLSHCY 326
           G++W       +  +   +L L +S +QLG V+G V  + +  +   +A L+S  Y
Sbjct: 46  GSVWDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIVFQIFYGLIGSWTAYLISVLY 101
to top
>PCBB_PROMM (Q7V6U4) Divinyl chlorophyll a/b light-harvesting protein pcbB|
          Length = 350

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
 Frame = +3

Query: 156 TGNLWTCV---AHIITGVIGAGVLA----LSWSVAQLGWVAGPVAMVCFAAVT 293
           +G LW  V   A   T   G G+L+    LSW++A +GW+A   A  C +  T
Sbjct: 215 SGGLWHIVTKQAGEYTTFKGKGILSAEAQLSWALAGVGWMALVAAFWCASNTT 267
to top
>PCBE_PROMA (Q9L8M2) Divinyl chlorophyll a/b light-harvesting protein pcbE|
          Length = 361

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +3

Query: 192 TGVIGAGVLA----LSWSVAQLGWVAGPVAMVCFAAVT 293
           T   GAG+L+    LSWS+A +GW+A   A  C    T
Sbjct: 238 TNFKGAGLLSAEAVLSWSLAGIGWMAIIAAFWCATNTT 275
to top
>HOXN_RALEU (P23516) High-affinity nickel transport protein|
          Length = 351

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
 Frame = +3

Query: 126 ELDDDGRVARTGNLWTCVAHIITGVIGAGVLALSWSVAQ--------LGWVAGPVAMVCF 281
           +L  DGR   T  LW  + H    V+ + ++A+  +  Q        +G V G +A   F
Sbjct: 78  KLMQDGRRPITAGLWFSLGHSSVVVLASVLIAVMATTLQERLDAFHEVGSVIGTLASALF 137

Query: 282 A-AVTYVSAVLLSHCYRS 332
             A+  ++ V+L   YR+
Sbjct: 138 LFAIAAINLVILRSAYRA 155
to top
>Y1709_RALSO (Q8XYP9) UPF0209 protein RSc1709|
          Length = 657

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 201 IGAGVLALSWSVAQLGWVAGPVAMVCFAAV 290
           +GAGV    W  AQ GWVA P   +C AA+
Sbjct: 379 VGAGVPQGGWWFAQAGWVAPP--DICRAAL 406


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.126    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,437,435
Number of Sequences: 219361
Number of extensions: 632527
Number of successful extensions: 2315
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2314
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top