ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast40b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TOM70_MOUSE (Q9CZW5) Mitochondrial precursor proteins import rec... 33 0.31
2TOM70_HUMAN (O94826) Mitochondrial precursor proteins import rec... 33 0.31
3Y1661_ARCFU (O28612) Hypothetical protein AF1661 precursor 31 1.6
4YBEQ_ECOLI (P77234) Hypothetical protein ybeQ 30 2.0
5Y808_ENCCU (Q8SUH8) Hypothetical protein ECU08_2080 30 2.7
6Y410_ENCCU (Q8SVY6) Hypothetical protein ECU04_0100 30 2.7
7Y109_ENCCU (Q8ST67) Hypothetical protein ECU01_0090/ECU01_1520/E... 30 2.7
8YUR1_YEAST (P26725) Probable mannosyltransferase YUR1 (EC 2.4.1.... 29 5.9

>TOM70_MOUSE (Q9CZW5) Mitochondrial precursor proteins import receptor|
           (Translocase of outer membrane TOM70)
          Length = 611

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 292 EKDLDASIAWFWKAIETGDKVDGALKDMAVVMKQRGYLDDAVD 420
           ++DLD  +    KAIE  +K D A + M  +  QRG ++ A+D
Sbjct: 527 KQDLDKGLELISKAIEIDNKCDFAYETMGTIEVQRGNMEKAID 569



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>TOM70_HUMAN (O94826) Mitochondrial precursor proteins import receptor|
           (Translocase of outer membrane TOM70)
          Length = 608

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 292 EKDLDASIAWFWKAIETGDKVDGALKDMAVVMKQRGYLDDAVD 420
           ++DLD  +    KAIE  +K D A + M  +  QRG ++ A+D
Sbjct: 524 KQDLDRGLELISKAIEIDNKCDFAYETMGTIEVQRGNMEKAID 566



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>Y1661_ARCFU (O28612) Hypothetical protein AF1661 precursor|
          Length = 250

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 277 HYQLVEKDLDASIAWFWKAIETGDKVDGALKDMAVVMKQRGYLDDAVD 420
           H+   EKDL+AS+ +FW+  +      G +     +    GYL  AVD
Sbjct: 60  HHNFSEKDLNASVDYFWQLDDVKPGDSGEMTVSLHLYNNPGYLWFAVD 107



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>YBEQ_ECOLI (P77234) Hypothetical protein ybeQ|
          Length = 325

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +1

Query: 274 KHYQLVEKDLDASIAWFWKAIETGD 348
           KH Q VEKD  A+  WF KA E  D
Sbjct: 251 KHGQGVEKDYQAAFEWFTKAAECND 275



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>Y808_ENCCU (Q8SUH8) Hypothetical protein ECU08_2080|
          Length = 276

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 440 WRSDRMASTASSR*PRCFITTAMSLSAPSTLSPVSIAFQNHAID 309
           W SD + +  S+  P   +  A  LS    L+P SI F + ++D
Sbjct: 127 WNSDEVVAVCSTLLPSLLVLPAHLLSTSCALTPGSIGFTDSSVD 170



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>Y410_ENCCU (Q8SVY6) Hypothetical protein ECU04_0100|
          Length = 276

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 440 WRSDRMASTASSR*PRCFITTAMSLSAPSTLSPVSIAFQNHAID 309
           W SD + +  S+  P   +  A  LS    L+P SI F + ++D
Sbjct: 127 WNSDEVVAVCSTLLPSLLVLPAHLLSTSCALTPGSIGFTDSSVD 170



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>Y109_ENCCU (Q8ST67) Hypothetical protein|
           ECU01_0090/ECU01_1520/ECU02_1550/ECU08_0020
          Length = 276

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 440 WRSDRMASTASSR*PRCFITTAMSLSAPSTLSPVSIAFQNHAID 309
           W SD + +  S+  P   +  A  LS    L+P SI F + ++D
Sbjct: 127 WNSDEVVAVCSTLLPSLLVLPAHLLSTSCALTPGSIGFTDSSVD 170



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>YUR1_YEAST (P26725) Probable mannosyltransferase YUR1 (EC 2.4.1.131)|
          Length = 428

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 274 KHYQLVEKDLDASIAWFWKAIETGD 348
           KHY +VE + D ++  FW   E GD
Sbjct: 292 KHYPVVEANSDYNLCHFWSNFEIGD 316


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,128,451
Number of Sequences: 219361
Number of extensions: 646642
Number of successful extensions: 1734
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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