Clone Information

BLAST Search Result

Clone Name	bast40b02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXP...	80	2e-15
2	EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXP...	79	4e-15
3	EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXP...	78	9e-15
4	EXPR1_ARATH (O23547) Expansin-related protein 1 precursor (AtEXP...	47	2e-05
5	EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2...	40	0.004
6	EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXP...	37	0.023
7	MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1	37	0.023
8	EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4...	37	0.023
9	PSL1_HUMAN (Q8TCT7) Signal peptide peptidase-like 2B (EC 3.4.23....	37	0.030
10	EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen...	35	0.067
11	EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EX...	35	0.067
12	EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) ...	35	0.067
13	MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I)...	35	0.067
14	EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-...	35	0.088
15	EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXP...	35	0.088
16	EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5...	33	0.33
17	CEBPE_RAT (P56261) CCAAT/enhancer-binding protein epsilon (C/EBP...	33	0.44
18	CEBPE_MOUSE (Q6PZD9) CCAAT/enhancer-binding protein epsilon (C/E...	33	0.44
19	MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Ho...	33	0.44
20	MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Ph...	32	0.57
21	EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXP...	32	0.57
22	CEBPE_SHEEP (O77728) CCAAT/enhancer-binding protein epsilon (C/E...	32	0.57
23	MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)	32	0.57
24	MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Or...	32	0.74
25	EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EX...	32	0.97
26	EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-...	32	0.97
27	SIN3A_HUMAN (Q96ST3) Paired amphipathic helix protein Sin3a (Tra...	32	0.97
28	SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysi...	32	0.97
29	EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-...	31	1.3
30	BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch...	31	1.3
31	BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...	31	1.3
32	EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-...	31	1.3
33	EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-...	31	1.7
34	EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EX...	31	1.7
35	EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-...	31	1.7
36	CEBPE_HUMAN (Q15744) CCAAT/enhancer-binding protein epsilon (C/E...	30	2.2
37	H11_GLYBA (P40263) Histone H1-I	30	2.8
38	MUTL_ECOLI (P23367) DNA mismatch repair protein mutL	30	2.8
39	EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EX...	30	2.8
40	EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EX...	30	2.8
41	Y2232_MYCBO (P64954) Hypothetical protein Mb2232	30	2.8
42	Y2209_MYCTU (P64953) Hypothetical protein Rv2209/MT2265	30	2.8
43	H11_GLYSA (P40266) Histone H1-I	30	3.7
44	LAT_HUMAN (O43561) Linker for activation of T-cells family membe...	30	3.7
45	EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EX...	30	3.7
46	FOXC1_MOUSE (Q61572) Forkhead box protein C1 (Forkhead-related p...	29	4.8
47	RANB3_HUMAN (Q9H6Z4) Ran-binding protein 3 (RanBP3)	29	4.8
48	MUTL_ECOL6 (Q8FAK9) DNA mismatch repair protein mutL	29	4.8
49	TMPB_TREPH (P29720) Treponemal membrane protein B precursor (Ant...	29	4.8
50	GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and bra...	29	6.3
51	AP180_HUMAN (O60641) Clathrin coat assembly protein AP180 (Clath...	29	6.3
52	NOCT_HUMAN (Q9UK39) Nocturnin (CCR4 protein homolog)	29	6.3
53	BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3...	29	6.3
54	MUTL_ECO57 (Q8XDN4) DNA mismatch repair protein mutL	28	8.2
55	OPAP_DROME (P23488) Male-specific opa-containing protein precurs...	28	8.2
56	ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog	28	8.2
57	ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog	28	8.2
58	IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)	28	8.2
59	IF2_CHRVO (Q7NY13) Translation initiation factor IF-2	28	8.2
60	RFX1_HUMAN (P22670) MHC class II regulatory factor RFX1 (RFX) (E...	28	8.2

>EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXPL1)|
           (Ath-ExpBeta-2.1)
          Length = 265

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 36/79 (45%), Positives = 47/79 (59%)
 Frame = +2

Query: 209 SACDRCARHSKAAFYTSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQV 388
           +ACDRC   SKAA+++S+  L++G+C YG+ A SF                 GC ACFQV
Sbjct: 19  NACDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQV 78

Query: 389 RCKXQKLCSGAGARVVVTD 445
           RCK  KLCS  G  V++TD
Sbjct: 79  RCKNPKLCSTKGTIVMITD 97

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>EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXPL2)|
           (Ath-ExpBeta-2.2)
          Length = 265

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 36/80 (45%), Positives = 46/80 (57%)
 Frame = +2

Query: 206 ASACDRCARHSKAAFYTSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQ 385
           A+ACDRC   SKAA+++S+  L++G+C YG+ A  F                 GC ACFQ
Sbjct: 19  AAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQ 78

Query: 386 VRCKXQKLCSGAGARVVVTD 445
           VRCK   LCS  G  V+VTD
Sbjct: 79  VRCKNPTLCSSKGTTVIVTD 98

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>EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXPL3)|
           (Ath-ExpBeta-2.3)
          Length = 263

 Score = 78.2 bits (191), Expect = 9e-15
 Identities = 35/79 (44%), Positives = 46/79 (58%)
 Frame = +2

Query: 209 SACDRCARHSKAAFYTSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQV 388
           +ACDRC   SKA++++S+  L++G+C YG  A SF                 GC ACFQV
Sbjct: 19  NACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQV 78

Query: 389 RCKXQKLCSGAGARVVVTD 445
           RCK  KLC+  G  V+VTD
Sbjct: 79  RCKNPKLCNSKGTIVMVTD 97

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>EXPR1_ARATH (O23547) Expansin-related protein 1 precursor (AtEXPR1) (At-EXPR1)|
           (Ath-ExpBeta-3.1)
          Length = 250

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
 Frame = +2

Query: 233 HSKAAFYTSSLTLA--AGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQK 406
           +S+A +Y S    A   G CGYG      N                GC AC+QVRCK   
Sbjct: 29  NSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPP 88

Query: 407 LCSGAGARVVVTD 445
            CS  G  VV TD
Sbjct: 89  HCSEEGVYVVATD 101

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>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)|
           (Ath-ExpBeta-1.4)
          Length = 273

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +2

Query: 278 GSCGYGTAAASFNXXXXXXXXX-XXXXXXVGCSACFQVRCKXQKLCSGAGARVVVTD 445
           G+CGYG A A                    GC AC+QV+C  +  CS     VV+TD
Sbjct: 66  GACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITD 122

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>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)|
           (Ath-ExpBeta-1.6)
          Length = 264

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +2

Query: 278 GSCGYGTAA-ASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQKLCSGAGARVVVTD 445
           G+CGYGT                       GC AC++VRC  + +CS     V++TD
Sbjct: 55  GACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITD 111

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>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1|
          Length = 246

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
 Frame = +2

Query: 236 SKAAFYTSSLTLAA-----GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKX 400
           ++A FY S+   AA     G+CGY                       +GC AC++++CK 
Sbjct: 21  ARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKCKE 80

Query: 401 QKLCSGAGARVVVTDR 448
              CSG    V +TD+
Sbjct: 81  PVECSGEPVLVKITDK 96

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>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)|
           (Ath-ExpBeta-1.1)
          Length = 259

 Score = 37.0 bits (84), Expect = 0.023
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +2

Query: 278 GSCGYGTAAASFNXXXXXXXXX-XXXXXXVGCSACFQVRCKXQKLCSGAGARVVVTD 445
           G+CGYG+A A+                   GC  C+QV C     CSG+   V +TD
Sbjct: 52  GACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITD 108

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>PSL1_HUMAN (Q8TCT7) Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein|
           SPP-like 2B) (Protein SPPL2b) (Intramembrane protease 4)
           (IMP4) (Presenilin-like protein 1)
          Length = 592

 Score = 36.6 bits (83), Expect = 0.030
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = -3

Query: 366 PTPPRYRAVPAAASRPPLKEAAAVPYP--QEPAARVSEEV*KAALEWRAQRSQAEASDGR 193
           P PP+  A P +  +PP +E A  P+P  Q P +R SEE+  A    R   S AE S+GR
Sbjct: 521 PQPPKDSATPLSP-QPPSEEPATSPWPAEQSPKSRTSEEM-GAGAPMREPGSPAE-SEGR 577

Query: 192 EQ 187
           +Q
Sbjct: 578 DQ 579

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>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea|
           m I)
          Length = 269

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 365 GCSACFQVRCKXQKLCSGAGARVVVTD 445
           GC +C++VRCK +  CSG    V +TD
Sbjct: 93  GCGSCYEVRCKEKPECSGNPVTVYITD 119

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>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)|
           (Ath-ExpAlpha-1.26)
          Length = 262

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
 Frame = +2

Query: 230 RHSKAAFY---TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKX 400
           R++ A FY   T   T+  G+CGYG    S                  GC  CFQ+ C  
Sbjct: 38  RYAHATFYGDETGGETMG-GACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSK 96

Query: 401 QKLCSGAGARVV 436
              C    + VV
Sbjct: 97  SPHCYSGKSTVV 108

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>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)|
           (Fragment)
          Length = 191

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 365 GCSACFQVRCKXQKLCSGAGARVVVTD 445
           GC +C++VRCK +  CSG    V +TD
Sbjct: 15  GCGSCYEVRCKEKPECSGNPVTVFITD 41

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>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)|
          Length = 263

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +2

Query: 278 GSCGYGTA-AASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQKLCSGAGARVVVTD 445
           G+CGY     A FN                GC +CF+++C   + CSG    V +TD
Sbjct: 62  GACGYKNVDKAPFNGMTGCGNTPIFKDGR-GCGSCFEIKCTKPESCSGEAVTVTITD 117

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>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)|
           (Ath-ExpAlpha-1.25)
          Length = 257

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
 Frame = +2

Query: 230 RHSKAAFY---TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKX 400
           R + A FY   T S T+  G+CGYG    S                   C  CFQ++C  
Sbjct: 32  RTASATFYGDDTGSATMG-GACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVS 90

Query: 401 QKLCSGAGARVVVT 442
              C       VVT
Sbjct: 91  SPNCYYGSPATVVT 104

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>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)|
           (Ath-ExpBeta-1.5)
          Length = 271

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +2

Query: 272 AAGSCGYGTAA--ASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQKLCSGAGARVVVTD 445
           + G+CGYG+      F                 GC AC++VRC  + +CS     ++ TD
Sbjct: 57  SGGACGYGSLVDVKPFKARVGAVSPILFKGGE-GCGACYKVRCLDKTICSKRAVTIIATD 115

Query: 446 RA 451
           ++
Sbjct: 116 QS 117

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>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)|
           (Ath-ExpBeta-1.3)
          Length = 264

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
 Frame = +2

Query: 224 CARHSKAAFYTSSLT---------LAAGSCGYGTAAASFNXXXXXXXXX-XXXXXXVGCS 373
           C  H+K  + T+ +T            G+CGYG A A                    GC 
Sbjct: 26  CYCHNKTHWNTAGITWYGDREGPGTTGGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCG 85

Query: 374 ACFQVRCKXQKLCSGAGARVVVTD 445
           AC++++C    LC+    +V+++D
Sbjct: 86  ACYRLKC-DHPLCTKKPIKVMISD 108

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>CEBPE_RAT (P56261) CCAAT/enhancer-binding protein epsilon (C/EBP epsilon)|
           (C/EBP-related protein 1)
          Length = 281

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 399 SLHLTWKHALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQR 220
           ++HL    A    P R    P AA+ PP       P P  P+ +  + V K +LE+R +R
Sbjct: 152 AVHLPPTLAAPGQPLRVLKAPVAAAAPPCSPLLKAPSPAGPSHKGKKAVNKDSLEYRLRR 211

Query: 219 SQ 214
            +
Sbjct: 212 ER 213

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>CEBPE_MOUSE (Q6PZD9) CCAAT/enhancer-binding protein epsilon (C/EBP epsilon)|
          Length = 281

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 399 SLHLTWKHALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQR 220
           ++HL    A    P R    P AA+ PP       P P  P+ +  + V K +LE+R +R
Sbjct: 152 AVHLPPTLAAPGQPLRVLKAPVAAAAPPCSPLLKAPSPAGPSHKGKKAVNKDSLEYRLRR 211

Query: 219 SQ 214
            +
Sbjct: 212 ER 213

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>MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Hol l I) (Hol l|
           1.0101 and 1.0102)
          Length = 265

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 365 GCSACFQVRCKXQKLCSGAGARVVVTD 445
           GC +CF+++C   + CSG    V +TD
Sbjct: 93  GCGSCFEIKCTKPESCSGEPVTVHITD 119

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>MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Pha a I)|
          Length = 269

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +2

Query: 278 GSCGYGTA-AASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQKLCSGAGARVVVTD 445
           G+CGY     A FN                GC +CF+++C   + CSG    V +TD
Sbjct: 68  GACGYKDVDKAPFNGMTGCGNTPIFKDGR-GCGSCFELKCSKPESCSGEPITVHITD 123

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>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)|
           (AtEx14) (Ath-ExpAlpha-1.5)
          Length = 255

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
 Frame = +2

Query: 233 HSKAAFY--TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRC-KXQ 403
           +++A FY    +     G+CGYG   +                    C ACFQ++C    
Sbjct: 31  NARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDP 90

Query: 404 KLCSGAGARVVVTD 445
           K C G    V  T+
Sbjct: 91  KWCIGGTITVTGTN 104

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>CEBPE_SHEEP (O77728) CCAAT/enhancer-binding protein epsilon (C/EBP epsilon)|
          Length = 281

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 399 SLHLTWKHALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQR 220
           ++HL    A    P R    P AA+ PP       P P  P+ +  + V K +LE+R +R
Sbjct: 152 AMHLPPGLASPSQPLRVLKAPLAAAAPPCSPLLKAPSPAGPSHKGKKAVNKDSLEYRLRR 211

Query: 219 SQ 214
            +
Sbjct: 212 ER 213

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>MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)|
          Length = 263

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 365 GCSACFQVRCKXQKLCSGAGARVVVTD 445
           GC +CF+++C   + CSG    V +TD
Sbjct: 91  GCGSCFEIKCTKPEACSGEPVVVHITD 117

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>MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Ory s I)|
          Length = 263

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 365 GCSACFQVRCKXQKLCSGAGARVVVTD 445
           GC +CF+++C   + CS   A + VTD
Sbjct: 91  GCGSCFEIKCSKPEACSDKPALIHVTD 117

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>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)|
           (Ath-ExpAlpha-1.2)
          Length = 250

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
 Frame = +2

Query: 278 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQ-KLCSGAGARVVVTD 445
           G+CGYG   +                  + C ACF++RC+   K C      V  T+
Sbjct: 46  GACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATN 102

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>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)|
           (Ath-ExpAlpha-1.3)
          Length = 248

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
 Frame = +2

Query: 233 HSKAAFYTSSLTLAA--GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQK 406
           ++ A FY  S       G+CGYG   +                  + C ACF+++C+   
Sbjct: 27  NAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDG 86

Query: 407 LCSGAGARVV 436
                GA +V
Sbjct: 87  AWCLPGAIIV 96

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>SIN3A_HUMAN (Q96ST3) Paired amphipathic helix protein Sin3a (Transcriptional|
           corepressor Sin3a) (Histone deacetylase complex subunit
           Sin3a)
          Length = 1273

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = -3

Query: 396 LHLTWKHALQPTP---PRYRAVPAAASRPPLKEAAAVPYPQEPAARVSE 259
           +H    H +QP P   P++ + P+A S P    A A P PQ P A+VS+
Sbjct: 208 VHQIPTHGIQPQPQPPPQHPSQPSAQSAP----APAQPAPQPPPAKVSK 252

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>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific|
            SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase
            complex subunit SET1) (SET-domain-containing protein 1A)
          Length = 1707

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
 Frame = -3

Query: 423  PAPLQSFXSLHLTWKHALQPTPPRYRAVPAAASRPP---LKEAAAVPYPQEPAARVSEEV 253
            P PL S   L   +  A++PTP      PA A RPP      AA    P +      E V
Sbjct: 1289 PRPLLSHILLEHNYALAVKPTP------PAPALRPPEPVPAPAALFSSPADEVLEAPEVV 1342

Query: 252  *KAALEWRAQRSQAEASDGREQ 187
               A E + Q+ Q +  +G E+
Sbjct: 1343 VAEAEEPKPQQLQQQREEGEEE 1364

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>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)|
           (Ath-ExpAlpha-1.22)
          Length = 266

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
 Frame = +2

Query: 230 RHSKAAFY--TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQ 403
           R ++A +Y  T+      G+CGYG    S                   C ACF++RC   
Sbjct: 41  RPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDD 100

Query: 404 KLCSGAGARVVVT 442
                 G  +++T
Sbjct: 101 LRWCIPGTSIILT 113

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>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -3

Query: 423 PAPLQSFXSLHLTWKHALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAA 271
           P P +     HL  +HA+   P  + A+P   SRP  + AA  P P  P A
Sbjct: 842 PQPPEHSTPPHLN-QHAVVSPPALHNALPQQPSRPSNRAAALPPKPTRPPA 891

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>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -3

Query: 423 PAPLQSFXSLHLTWKHALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAA 271
           P P +     HL  +HA+   P  + A+P   SRP  + AA  P P  P A
Sbjct: 840 PQPPEHSTPPHLN-QHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPA 889

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>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)|
           (Ath-ExpAlpha-1.23)
          Length = 256

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 19/63 (30%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
 Frame = +2

Query: 257 SSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQ-KLCSGAGARV 433
           SS     G+CGYG    S                   C AC +VRC    + C      V
Sbjct: 42  SSSVATGGACGYGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSV 101

Query: 434 VVT 442
           VVT
Sbjct: 102 VVT 104

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>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)|
           (Ath-ExpAlpha-1.1)
          Length = 249

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
 Frame = +2

Query: 278 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQ-KLCSGAGARVVVTD 445
           G+CGYG   +                  + C +CF++RC+   K C      V  T+
Sbjct: 45  GACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATN 101

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>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)|
           (Ath-ExpAlpha-1.6)
          Length = 257

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
 Frame = +2

Query: 230 RHSKAAFYTSSLTLAA--GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRC-KX 400
           +++ A FY  S       G+CGYG   +                  + C ACF+++C   
Sbjct: 32  QNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCAND 91

Query: 401 QKLCSGAGARVVVT 442
            + C      +++T
Sbjct: 92  PQWCHSGSPSILIT 105

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>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)|
           (Ath-ExpAlpha-1.7)
          Length = 260

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
 Frame = +2

Query: 278 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRC-KXQKLCSGAGARVVVT 442
           G+CGYG   +                    C ACF+++C    K C      V VT
Sbjct: 53  GACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVT 108

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>CEBPE_HUMAN (Q15744) CCAAT/enhancer-binding protein epsilon (C/EBP epsilon)|
          Length = 281

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = -3

Query: 399 SLHLTWKHALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQR 220
           ++HL    A    P R    P A + PP       P P  P  +  + V K +LE+R +R
Sbjct: 152 AMHLPPTLAAPGQPLRVLKAPLATAAPPCSPLLKAPSPAGPLHKGKKAVNKDSLEYRLRR 211

Query: 219 SQ 214
            +
Sbjct: 212 ER 213

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>H11_GLYBA (P40263) Histone H1-I|
          Length = 233

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
 Frame = -3

Query: 369 QPTPPRYRAVPAA---ASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQRSQAEASD 199
           +P   +  A PAA   A++P  K+AAA P  ++PAA+ S +  KAA + +A+ +  +++ 
Sbjct: 161 KPAVEKKAAKPAAKKAAAKPAAKKAAAKPAAKKPAAKASPK--KAAAKPKAKPTPKKSTP 218

Query: 198 GR 193
            +
Sbjct: 219 AK 220

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>MUTL_ECOLI (P23367) DNA mismatch repair protein mutL|
          Length = 615

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = -3

Query: 393 HLTWKHALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQRSQ 214
           H     A +P  PRY   PA+ SRP    AA  P  Q    +   EV +  L+  A   +
Sbjct: 362 HFAEPAAREPVAPRYTPAPASGSRP----AAPWPNAQPGYQKQQGEVYRQLLQTPAPMQK 417

Query: 213 AEASDGRE 190
            +A + +E
Sbjct: 418 LKAPEPQE 425

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>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)|
           (Ath-ExpAlpha-1.9)
          Length = 262

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
 Frame = +2

Query: 230 RHSKAAFYTSSLTLAA--GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQ 403
           +++ A FY  S       G+CGYG   +                    C ACF+++C   
Sbjct: 37  QNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDD 96

Query: 404 -KLCSGAGARVVVT 442
            + C      ++VT
Sbjct: 97  PRWCVPGNPSILVT 110

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>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)|
           (Ath-ExpAlpha-1.8)
          Length = 257

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
 Frame = +2

Query: 278 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQ-KLCSGAGARVVVT 442
           G+CGYG   +                    C ACF+++C    K C      + +T
Sbjct: 50  GACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFIT 105

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>Y2232_MYCBO (P64954) Hypothetical protein Mb2232|
          Length = 512

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 369 QPTPPRYR-AVPAAASRP-PLKEAAAVPYPQEPAARVSE 259
           +P PP  R +   AA RP P K AAA+P P+ PA  V E
Sbjct: 463 RPAPPLNRPSCRRAARRPAPGKPAAALPQPRHPAVGVRE 501

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>Y2209_MYCTU (P64953) Hypothetical protein Rv2209/MT2265|
          Length = 512

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 369 QPTPPRYR-AVPAAASRP-PLKEAAAVPYPQEPAARVSE 259
           +P PP  R +   AA RP P K AAA+P P+ PA  V E
Sbjct: 463 RPAPPLNRPSCRRAARRPAPGKPAAALPQPRHPAVGVRE 501

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>H11_GLYSA (P40266) Histone H1-I|
          Length = 233

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -3

Query: 369 QPTPPRYRAVPAA---ASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQ 223
           +P   +  A PAA    ++P  K+AAA P  +EPAA+ S +  KAA + +A+
Sbjct: 161 KPAVEKKAAKPAAKKAVAKPAAKKAAAKPAAKEPAAKASPK--KAAAKPKAK 210

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>LAT_HUMAN (O43561) Linker for activation of T-cells family member 1 (36 kDa|
           phospho-tyrosine adapter protein) (pp36) (p36-38)
          Length = 262

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 378 HALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEP 277
           H + P PP Y   P   S PPL +   +P P+ P
Sbjct: 55  HTVAPWPPAY---PPVTSYPPLSQPDLLPIPRSP 85

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>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)|
           (Ath-ExpAlpha-1.4)
          Length = 255

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 14/55 (25%), Positives = 20/55 (36%)
 Frame = +2

Query: 278 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCSACFQVRCKXQKLCSGAGARVVVT 442
           G+CGYG   +                  + C ACF++ C         G  +VVT
Sbjct: 57  GACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVT 111

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>FOXC1_MOUSE (Q61572) Forkhead box protein C1 (Forkhead-related protein FKHL7)|
           (Forkhead-related transcription factor 3) (FREAC-3)
           (Transcription factor FKH-1) (Mesoderm/mesenchyme
           forkhead 1) (MF-1)
          Length = 553

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 378 HALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSE 259
           H  +P PP+    PA A  PP +   + P PQ P  R+ +
Sbjct: 190 HLQEPPPPQAGRQPAPA--PPEQAEGSAPGPQPPPVRIQD 227

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>RANB3_HUMAN (Q9H6Z4) Ran-binding protein 3 (RanBP3)|
          Length = 567

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 381 KHALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAAR 268
           +HAL+P  P      A+   PP  EA   P+P+E A R
Sbjct: 60  EHALEPPAPA--GASASTPPPPAPEAQLPPFPRELAGR 95

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>MUTL_ECOL6 (Q8FAK9) DNA mismatch repair protein mutL|
          Length = 615

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -3

Query: 369 QPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQRSQAEASDGRE 190
           +P  PRY   PA+ SRP    AA+ P  Q    +   EV +  L+  A   + +A + +E
Sbjct: 370 EPVAPRYSPAPASGSRP----AASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKAPEPQE 425

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>TMPB_TREPH (P29720) Treponemal membrane protein B precursor (Antigen tmpB)|
          Length = 384

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -3

Query: 348 RAVPAAASRPPLKEAAAVPYPQEPAARVS--EEV*KAALEWRAQRSQAE 208
           +A   AA+R   +EAAA    +E AAR++  EE  + A E  A R  AE
Sbjct: 240 KAAEEAAARKAAEEAAARKAAEEEAARIAAEEEAARKAAEEEAARKAAE 288

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>GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and brain-specific|
           homeobox protein 2)
          Length = 340

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -3

Query: 372 LQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAA 271
           L P PP   A+P AA +PPL  A   P P  P A
Sbjct: 55  LPPPPP---ALPQAALQPPLPPAPPPPLPALPGA 85

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>AP180_HUMAN (O60641) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein)
          Length = 907

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 387 TWKHALQPTPPRYRAVPAAASRPPLKEAAAVPYP 286
           TW   + P+ P   AVP  +S PP+  A +V  P
Sbjct: 803 TWSAGVPPSAPLQGAVPPTSSVPPVAGAPSVGQP 836

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>NOCT_HUMAN (Q9UK39) Nocturnin (CCR4 protein homolog)|
          Length = 431

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -3

Query: 372 LQPTPPRYRAVPAAASRPPLKEAAAVPYPQEP 277
           LQ   P  R +PA   R PL   AAVP P  P
Sbjct: 13  LQRGAPGLRRLPAPGLRRPLSPPAAVPRPASP 44

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>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)|
            (Hemidesmosomal plaque protein) (Dystonia musculorum
            protein) (Dystonin)
          Length = 7389

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = -3

Query: 372  LQPTPPRYRAVPAAASRPPLKEAAAVPYPQ--EPAARVSE 259
            ++  P  +R VP A SRP   + + +P PQ   PA+++ +
Sbjct: 7346 VETVPQTHRPVPRAGSRPSTAKPSKIPTPQRRSPASKLDK 7385

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>MUTL_ECO57 (Q8XDN4) DNA mismatch repair protein mutL|
          Length = 615

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = -3

Query: 369 QPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQRSQAEASDGRE 190
           +P  PRY   PA+ SRP    AA  P  Q    +   EV +  L+  A   + +A + +E
Sbjct: 370 EPVAPRYTPAPASGSRP----AAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKAPEPQE 425

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>OPAP_DROME (P23488) Male-specific opa-containing protein precursor (Protein|
           dromsopa)
          Length = 83

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -3

Query: 366 PTPPRYRAVPAAASRPPLKEAAAVPYPQEPAA 271
           P P    A PAAA+ PP   AA    P  PAA
Sbjct: 28  PAPEAAAAPPAAAAAPPAAAAAPPAPPAPPAA 59

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>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog|
          Length = 328

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/72 (30%), Positives = 27/72 (37%)
 Frame = -3

Query: 426 APAPLQSFXSLHLTWKHALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*K 247
           AP P Q   S         QP PP     P A   PP   +A    P EP       V +
Sbjct: 124 APQPQQVQPSAPPVQPPQQQPAPPSQAPQPVAQPAPP--PSAQTFQPAEPVVEAEPVVEE 181

Query: 246 AALEWRAQRSQA 211
           A +  + QR +A
Sbjct: 182 APVVEKPQRKEA 193

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>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog|
          Length = 328

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/72 (30%), Positives = 27/72 (37%)
 Frame = -3

Query: 426 APAPLQSFXSLHLTWKHALQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*K 247
           AP P Q   S         QP PP     P A   PP   +A    P EP       V +
Sbjct: 124 APQPQQVQPSAPPVQPPQQQPAPPSQAPQPVAQPAPP--PSAQTFQPAEPVVEAEPVVEE 181

Query: 246 AALEWRAQRSQA 211
           A +  + QR +A
Sbjct: 182 APVVEKPQRKEA 193

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>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)|
          Length = 512

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = -3

Query: 384 WKHALQPTPP---RYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAA 241
           W+ + QP PP   R R V  A   PPL   A  P P +P A   E    AA
Sbjct: 194 WRGSEQPDPPGGQRTRGVRQAP--PPLMTLAIAPPPADPRAPAPERKAPAA 242

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>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2|
          Length = 964

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -3

Query: 357 PRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQRSQAEASDGREQ 187
           P  +  P  A+ P  +  A++  P+E AAR +EE  +AA   R +    E  +  E+
Sbjct: 148 PEPKPEPKPAAAPAPRTVASILSPEEIAAREAEEKRQAAFRARQEALMREKIEREER 204

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>RFX1_HUMAN (P22670) MHC class II regulatory factor RFX1 (RFX) (Enhancer factor|
           C) (EF-C)
          Length = 979

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = -3

Query: 372 LQPTPPRYR---AVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQRSQAEAS 202
           LQ  PP  +   A P A  +PP     A P P +P    +    +   E ++ + QA+  
Sbjct: 9   LQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQAQPP 68

Query: 201 DGREQ 187
            G++Q
Sbjct: 69  GGQKQ 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,052,020
Number of Sequences: 219361
Number of extensions: 425347
Number of successful extensions: 2360
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 2099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2326
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result