>ref|NM_189652.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1098

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                  
Query: 90  ctcccggagcagcggctcgtcgagggcgtcgccttccccgcggtgctcgtcccga 144
           |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 40  ctcccggagcagcggctcgtcgagggcgtcgccttcccggcggtgctcgtcccga 94



 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                       
Query: 175 gcctcgacgagttcctgtcggccgtgcggtcggagcgggcgtcccgggtggagccgctgc 234
           ||||||||| |||||||   ||||||||||||||| ||||||||  ||||||||||||||
Sbjct: 122 gcctcgacgcgttcctggacgccgtgcggtcggagagggcgtccacggtggagccgctgc 181

                                                      
Query: 235 tgcgggaggcaggggcggtgctgctgcgcggnttccccgcgcg 277
           ||||||  || || ||||||||||| ||||| ||||| |||||
Sbjct: 182 tgcggggcgccggcgcggtgctgctccgcgggttcccggcgcg 224

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                      
Query: 90      ctcccggagcagcggctcgtcgagggcgtcgccttccccgcggtgctcgtcccga 144
               |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4799296 ctcccggagcagcggctcgtcgagggcgtcgccttcccggcggtgctcgtcccga 4799350



 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                           
Query: 175     gcctcgacgagttcctgtcggccgtgcggtcggagcgggcgtcccgggtggagccgctgc 234
               ||||||||| |||||||   ||||||||||||||| ||||||||  ||||||||||||||
Sbjct: 4799378 gcctcgacgcgttcctggacgccgtgcggtcggagagggcgtccacggtggagccgctgc 4799437

                                                          
Query: 235     tgcgggaggcaggggcggtgctgctgcgcggnttccccgcgcg 277
               ||||||  || || ||||||||||| ||||| ||||| |||||
Sbjct: 4799438 tgcggggcgccggcgcggtgctgctccgcgggttcccggcgcg 4799480

>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0710E05
          Length = 179714

 Score =  101 bits (51), Expect = 1e-18
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                    
Query: 90    ctcccggagcagcggctcgtcgagggcgtcgccttccccgcggtgctcgtcccga 144
             |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 43945 ctcccggagcagcggctcgtcgagggcgtcgccttcccggcggtgctcgtcccga 43999



 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 89/103 (86%)
 Strand = Plus / Plus

                                                                         
Query: 175   gcctcgacgagttcctgtcggccgtgcggtcggagcgggcgtcccgggtggagccgctgc 234
             ||||||||| |||||||   ||||||||||||||| ||||||||  ||||||||||||||
Sbjct: 44027 gcctcgacgcgttcctggacgccgtgcggtcggagagggcgtccacggtggagccgctgc 44086

                                                        
Query: 235   tgcgggaggcaggggcggtgctgctgcgcggnttccccgcgcg 277
             ||||||  || || ||||||||||| ||||| ||||| |||||
Sbjct: 44087 tgcggggcgccggcgcggtgctgctccgcgggttcccggcgcg 44129

>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 239   ggaggcaggggcggtgctgctgcgcgg 265
             ||||||| |||||||||||||||||||
Sbjct: 69989 ggaggcaagggcggtgctgctgcgcgg 70015

>ref|XM_842586.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0656)
            partial mRNA
          Length = 4731

 Score = 46.1 bits (23), Expect = 0.060
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 239  ggaggcaggggcggtgctgctgcgcgg 265
            ||||||| |||||||||||||||||||
Sbjct: 1356 ggaggcaagggcggtgctgctgcgcgg 1330

>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster,
             complete sequence
          Length = 135638

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 241   aggcaggggcggtgctgctgcgcggnttc 269
             |||| |||||||||||||||||||| |||
Sbjct: 28276 aggccggggcggtgctgctgcgcggcttc 28304

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 200    gcggtcggagcgggcgtcccgg 221
              ||||||||||||||||||||||
Sbjct: 730256 gcggtcggagcgggcgtcccgg 730277

>emb|CR974477.12| Pig DNA sequence from clone CH242-217L7 on chromosome 17, complete
              sequence
          Length = 204661

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 215    gtcccgggtggagccgctgctgcgg 239
              |||||||||||||| ||||||||||
Sbjct: 106530 gtcccgggtggagctgctgctgcgg 106506

>gb|AC166111.4| Mus musculus BAC clone RP23-68O7 from chromosome 1, complete sequence
          Length = 185692

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   accgggagaggggagcctcg 180
             ||||||||||||||||||||
Sbjct: 94436 accgggagaggggagcctcg 94417

>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete
             sequence
          Length = 113193

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ggcgcccgtggcgggcagca 69
             ||||||||||||||||||||
Sbjct: 36634 ggcgcccgtggcgggcagca 36615

>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01,
             complete sequence
          Length = 182504

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   cgggaccgggagaggggagc 176
             ||||||||||||||||||||
Sbjct: 30228 cgggaccgggagaggggagc 30247

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 57      gtggcgggcagcagcttctt 76
               ||||||||||||||||||||
Sbjct: 3158957 gtggcgggcagcagcttctt 3158938

>emb|AL121845.20|HSJ583P15 Human DNA sequence from clone RP4-583P15 on chromosome 20 Contains
            the 3' end of the TNFRSF6B gene for member 6 (decoy) of
            tumor necrosis factor receptor, the ARFRP1 gene for
            ADP-ribosylation factor related protein 1, the gene for a
            novel protein (KIAA1847, FLJ14972), the gene for a novel
            protein (FLJ20406), the SLC2A4RG gene for SLC2A4
            regulator (GEF),  the 3' end of the BTBD4 gene for BTB
            (POZ) domain containing 4, a novel gene and ten CpG
            islands, complete sequence
          Length = 120917

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  gctgctgcgggaggcagggg 249
            ||||||||||||||||||||
Sbjct: 5396 gctgctgcgggaggcagggg 5415

>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29
          Length = 302007

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    ggccgtgcggtcggagcggg 213
              ||||||||||||||||||||
Sbjct: 101438 ggccgtgcggtcggagcggg 101457

>gb|AF293355.2| Streptomyces collinus DSM2012 rubrinomycin gene cluster, complete
            sequence
          Length = 32634

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 218  ccgggtggagccgctgctgcggga 241
            |||| |||||||||||||||||||
Sbjct: 5598 ccggctggagccgctgctgcggga 5621

>gb|AC145335.15| Pan troglodytes clone rp43-26k12, complete sequence
          Length = 208895

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    ggctcccggagcagcggctc 107
             ||||||||||||||||||||
Sbjct: 68897 ggctcccggagcagcggctc 68878

>gb|AC159214.2| Pan troglodytes BAC clone CH251-522M3 from chromosome unknown, complete
              sequence
          Length = 190101

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     ggctcccggagcagcggctc 107
              ||||||||||||||||||||
Sbjct: 104773 ggctcccggagcagcggctc 104754

>gb|AF043491.1|AF043491 Oryctolagus cuniculus prostaglandin E2 receptor subtype EP1 mRNA,
           partial cds
          Length = 781

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 85  cgcggctcccggagcagcggctcg 108
           ||||||||||||||| ||||||||
Sbjct: 266 cgcggctcccggagcggcggctcg 289

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 157      cgggaccgggagaggggagc 176
                ||||||||||||||||||||
Sbjct: 12137844 cgggaccgggagaggggagc 12137825

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 97      agcagcggctcgtcgagggcgtcg 120
               |||||||||||||||||| |||||
Sbjct: 4840516 agcagcggctcgtcgaggtcgtcg 4840539

>gb|AC108391.14| Mus musculus chromosome 1, clone RP23-16N14, complete sequence
          Length = 257730

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   accgggagaggggagcctcg 180
             ||||||||||||||||||||
Sbjct: 48489 accgggagaggggagcctcg 48470

>gb|AF217796.1|AF217796 Homo sapiens SCG10 like-protein, helicase-like protein NHL, M68, and
             ADP-ribosylation factor related protein 1 (ARFRP1) genes,
             complete cds
          Length = 114793

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gctgctgcgggaggcagggg 249
             ||||||||||||||||||||
Sbjct: 90864 gctgctgcgggaggcagggg 90883

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 157      cgggaccgggagaggggagc 176
                ||||||||||||||||||||
Sbjct: 12217151 cgggaccgggagaggggagc 12217132

>emb|Z54172.1|PSP16S23S Pyrococcus sp. 16S rRNA gene and partial 23S rRNA gene
          Length = 1784

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 148 gcgggcccccgggaccgggagagg 171
           ||||||||| ||||||||||||||
Sbjct: 598 gcgggcccctgggaccgggagagg 621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,787,820
Number of Sequences: 3902068
Number of extensions: 1787820
Number of successful extensions: 45676
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45260
Number of HSP's gapped (non-prelim): 416
length of query: 282
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 260
effective length of database: 17,147,199,772
effective search space: 4458271940720
effective search space used: 4458271940720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)