ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast40a08 |
|---|---|
| Clone Library Name | barley_pub |
>FGD2_MOUSE (Q8BY35) FYVE, RhoGEF and PH domain-containing protein 2| Length = 655 Score = 32.7 bits (73), Expect = 0.55 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Frame = -2 Query: 322 HRPKDQLHSSPEPLTASPMSSSVHCTCASRRPAAATFTSWCR------CWTASCTCDSWP 161 H P+ QL SPEP A P+ ++ + RP + T+ S + W SC P Sbjct: 38 HSPEHQLSLSPEPWEAPPVKEALK---SEFRPVSRTYLSSLKNKLSSGAWRRSCQPGVSP 94 Query: 160 RSKSRETELTTMKKATREL 104 +++E E K+ REL Sbjct: 95 GPETQEPE---EKRVVREL 110
>RGS19_RAT (O70521) Regulator of G-protein signaling 19 (RGS19)| (G-alpha-interacting protein) (GAIP protein) Length = 216 Score = 32.3 bits (72), Expect = 0.72 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Frame = -2 Query: 325 THRPKDQLHSSPEPLTASPMSSSVHCTCASRRPAAATFTSWCRCWTASCTCDSWPRSKSR 146 T ++ H+ PE P SS H S P+ C CW C+C SW + + R Sbjct: 3 TPHEAEKQHTGPEEADRPPSMSS-HDAAPSGPPSR---NPCCLCWCCCCSC-SWNQERQR 57 Query: 145 ETELTTMKK----ATRELTTPRRP 86 +++ K + E+ TP P Sbjct: 58 AWQVSRESKLQPLPSCEVCTPPSP 81
>RGS19_MOUSE (Q9CX84) Regulator of G-protein signaling 19 (RGS19)| Length = 216 Score = 32.3 bits (72), Expect = 0.72 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Frame = -2 Query: 325 THRPKDQLHSSPEPLTASPMSSSVHCTCASRRPAAATFTSWCRCWTASCTCDSWPRSKSR 146 T ++ H+ PE P SS H S P+ C CW C+C SW + + R Sbjct: 3 TPHEAEKQHTGPEEADRPPSMSS-HDAAPSGPPSR---NPCCLCWCCCCSC-SWNQERQR 57 Query: 145 ETELTTMKK----ATRELTTPRRP 86 +++ K + E+ TP P Sbjct: 58 AWQVSRESKLQPLPSCEVCTPPSP 81
>RGS19_HUMAN (P49795) Regulator of G-protein signaling 19 (RGS19)| (G-alpha-interacting protein) (GAIP protein) Length = 217 Score = 31.6 bits (70), Expect = 1.2 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = -2 Query: 322 HRPKDQLHSSPEPLTASPMSSSVHCTCASRRPAAATFTSWCRCWTASCTCDSWPRSKSRE 143 H + Q+ + PE P SS H T + PAA + C CW C+C SW + + R Sbjct: 5 HEAEKQI-TGPEEADRPPSMSS-HDTAS---PAAPSRNPCCLCWCCCCSC-SWNQERRRA 58 Query: 142 TELTTMKK 119 + + K Sbjct: 59 WQASRESK 66
>AMGO3_HUMAN (Q86WK7) Amphoterin-induced protein 3 precursor (AMIGO-3)| (Alivin-3) Length = 504 Score = 30.8 bits (68), Expect = 2.1 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -2 Query: 214 FTSWCRCWTASCTCDSWPRSKSRETELTTMKKATRELTTPRRPS 83 F CRC +C C WP++ S EL+ + + T P PS Sbjct: 403 FAPPCRCCRRACRCRRWPQTPSPLQELSA-QSSVLSTTPPDAPS 445
>EFNA4_HUMAN (P52798) Ephrin-A4 precursor (EPH-related receptor tyrosine kinase| ligand 4) (LERK-4) Length = 201 Score = 30.4 bits (67), Expect = 2.7 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +1 Query: 247 CSGRTSSWARP*GAPGRSATGPWDGG 324 C R S A P G+PG S T W GG Sbjct: 153 CKERKSESAHPVGSPGESGTSGWRGG 178
>LE25_LYCES (Q00747) Protein LE25| Length = 88 Score = 29.6 bits (65), Expect = 4.7 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +3 Query: 180 QLAVQHRHQEVKVAAAGRRDAQVQWTDELMGEAVRGSG 293 ++A + + V A G+RDA+ Q E G A G+G Sbjct: 38 EMATEKKEDRVAAAEMGKRDAKAQHAAEKQGAATTGTG 75
>MET3_EMENI (Q12555) Sulfate adenylyltransferase (EC 2.7.7.4) (Sulfate| adenylate transferase) (SAT) (ATP-sulfurylase) Length = 574 Score = 29.3 bits (64), Expect = 6.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 302 ALLPGAPHGLAHELVRPLHLRVAAPRRGHLHLLV 201 ALLP P+G+A + PL +R+ PR H ++ Sbjct: 246 ALLPRYPNGMAALALLPLAMRMGGPREAVWHAII 279
>SWD2_YEAST (P36104) COMPASS component SWD2 (Complex proteins associated with| SET1 protein SWD2) (Set1C component SWD2) Length = 329 Score = 29.3 bits (64), Expect = 6.1 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 333 NASQPLYSGLNCSFIFDEVACEKYGRNDTRYQH 431 N + LYS NC F+ D +A +KYG + + H Sbjct: 48 NDTMQLYSATNCKFL-DTIASKKYGCHSAIFTH 79
>ATE1_DROME (O96539) Arginyl-tRNA--protein transferase 1 (EC 2.3.2.8)| (R-transferase 1) (Arginyltransferase 1) (Arginine-tRNA--protein transferase 1) Length = 484 Score = 29.3 bits (64), Expect = 6.1 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = -2 Query: 202 CRCWTASCTCDSWPRSKSRETELTTMKKATRELTTPRRPSTGDGEDVAVA 53 C C+T C + SKS + L + + R+ +P GDG+ A A Sbjct: 65 CPCYTIKCNGLEFKLSKSNKRILRRINRFLRDGKRESKPEAGDGDGEADA 114
>BIRC3_HUMAN (Q13489) Baculoviral IAP repeat-containing protein 3 (Inhibitor of| apoptosis protein 1) (HIAP1) (HIAP-1) (C-IAP2) (TNFR2-TRAF signaling complex protein 1) (IAP homolog C) (Apoptosis inhibitor 2) (API2) Length = 604 Score = 29.3 bits (64), Expect = 6.1 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = -2 Query: 355 E*SGWEALSYTHRPKDQLHSSPEPLTASPMSSSVHCTCASRRPAAATFTSW 203 E SG+ SY++ P + ++S ++ M SS HC + TF +W Sbjct: 129 ENSGYFRGSYSNSPSNPVNSRANQDFSALMRSSYHCAMNNENARLLTFQTW 179
>PIGM_RHOER (O69349) Pigment production hydroxylase (EC 1.-.-.-)| Length = 393 Score = 28.9 bits (63), Expect = 7.9 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +3 Query: 324 VYDNASQPLYSGLNCSFIFDEVACEKYGRNDTRY 425 V +A P Y ++C + D A KYGR +T Y Sbjct: 194 VVKDAYVPDYRVMDCDEVIDGTAVRKYGRTETLY 227 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,243,302 Number of Sequences: 219361 Number of extensions: 1122967 Number of successful extensions: 4415 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4235 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4413 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
