| Clone Name | bast40a07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region ge... | 32 | 0.52 | 2 | IE18_PRVIF (P11675) Immediate-early protein IE180 | 29 | 3.4 | 3 | PI3R5_PIG (O02696) Phosphoinositide 3-kinase regulatory subunit ... | 28 | 5.8 | 4 | SFTPA_CANFA (P06908) Pulmonary surfactant-associated protein A p... | 28 | 7.5 | 5 | TXLNA_MOUSE (Q6PAM1) Alpha-taxilin | 27 | 9.9 | 6 | TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding prote... | 27 | 9.9 |
|---|
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 31.6 bits (70), Expect = 0.52 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 6 PAKRPQQQKSITRTPLAAHPPLHPCVP 86 P++ P + +S++R P + PPLHPC P Sbjct: 749 PSRPPSRPQSVSRPP--SEPPLHPCPP 773
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +2 Query: 98 PRRCRRRWAAPSSMVSGAPRSSRGPGCSGAPSGW 199 P R A+P+S SG+ SS PG S AP W Sbjct: 165 PGRSSPSAASPASSSSGSSGSSGSPGPSAAPRRW 198
>PI3R5_PIG (O02696) Phosphoinositide 3-kinase regulatory subunit 5 (PI3-kinase| regulatory subunit 5) (PI3-kinase p101 subunit) (PtdIns-3-kinase p101) (p101-PI3K) (Phosphatidylinositol-4,5-bisphosphate 3-kinase regulatory subunit) (PtdIns-3-kinase regulato Length = 877 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = -1 Query: 195 PDGAPEHPGPRELRGAP 145 P AP HPGP EL AP Sbjct: 581 PTDAPRHPGPAELGAAP 597
>SFTPA_CANFA (P06908) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 248 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -1 Query: 195 PDGAPEHPGPRELRGAP 145 P G P HPGP + GAP Sbjct: 63 PGGMPGHPGPNGMTGAP 79
>TXLNA_MOUSE (Q6PAM1) Alpha-taxilin| Length = 554 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +2 Query: 125 APSSMVSGAPRSSRGPGCSGAPS 193 +P + + +PR++ P CSGAPS Sbjct: 515 SPGAQPASSPRATDAPCCSGAPS 537
>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)| (Fragment) Length = 290 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 Query: 3 DPAKRPQQQKSITRTPLAAHPP 68 DP K P+ + SI R P+A PP Sbjct: 185 DPPKPPKVEASIVRPPVATSPP 206 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.127 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,818,753 Number of Sequences: 219361 Number of extensions: 409536 Number of successful extensions: 1423 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1219 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1423 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)