ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast40a04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469521.1| Oryza sativa (japonica cultivar-group), mRNA Length = 894 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 97 ggcgacaagtccgactacgagagcatccgcgatgcccgcatctcggagaacctggcccgg 156 |||| ||||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||| Sbjct: 13 ggcggcaagtccgactacgagagcgtccgcgacgcccgcatctccgagaacctggcacgg 72 Query: 157 atggagatgctcggcttgcgccgctgcgccggggagctcagcgccatctcctccg 211 ||||||||||||||| |||||||||||||||||||| |||| |||||| |||||| Sbjct: 73 atggagatgctcggcctgcgccgctgcgccggggagttcagtgccatcgcctccg 127 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 238 accccgagaaagaccccgaagccgccgcgggtcctcaccccgctccgccgctc 290 |||||||| | || ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 181 accccgaggaggaaccccaagccgccgcgtgtcctcaccccgctccgccgctc 233
>dbj|AK106258.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F02, full insert sequence Length = 1367 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 97 ggcgacaagtccgactacgagagcatccgcgatgcccgcatctcggagaacctggcccgg 156 |||| ||||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||| Sbjct: 92 ggcggcaagtccgactacgagagcgtccgcgacgcccgcatctccgagaacctggcacgg 151 Query: 157 atggagatgctcggcttgcgccgctgcgccggggagctcagcgccatctcctccg 211 ||||||||||||||| |||||||||||||||||||| |||| |||||| |||||| Sbjct: 152 atggagatgctcggcctgcgccgctgcgccggggagttcagtgccatcgcctccg 206 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 238 accccgagaaagaccccgaagccgccgcgggtcctcaccccgctccgccgctc 290 |||||||| | || ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 260 accccgaggaggaaccccaagccgccgcgtgtcctcaccccgctccgccgctc 312
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 154 cggatggagatgctcggcttgcgccgctgcgccggggagctcagcgccatctcctccg 211 |||||||||||||||||| |||||||||||||||||||| |||| |||||| |||||| Sbjct: 28475303 cggatggagatgctcggcctgcgccgctgcgccggggagttcagtgccatcgcctccg 28475360 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 97 ggcgacaagtccgactacgagagcatccgcgatgcccgcatctcggagaacctgg 151 |||| ||||||||||||||||||| ||||||| ||||||||||| |||||||||| Sbjct: 28475124 ggcggcaagtccgactacgagagcgtccgcgacgcccgcatctccgagaacctgg 28475178 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 238 accccgagaaagaccccgaagccgccgcgggtcctcaccccgctccgccgctc 290 |||||||| | || ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 28475414 accccgaggaggaaccccaagccgccgcgtgtcctcaccccgctccgccgctc 28475466 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 34588103 gaggaggaggatcaggaggag 34588123 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 ccgaggaggaggatcaggaggaga 424 |||||||||||||| ||||||||| Sbjct: 33720578 ccgaggaggaggatgaggaggaga 33720601
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 154 cggatggagatgctcggcttgcgccgctgcgccggggagctcagcgccatctcctccg 211 |||||||||||||||||| |||||||||||||||||||| |||| |||||| |||||| Sbjct: 28566627 cggatggagatgctcggcctgcgccgctgcgccggggagttcagtgccatcgcctccg 28566684 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 97 ggcgacaagtccgactacgagagcatccgcgatgcccgcatctcggagaacctgg 151 |||| ||||||||||||||||||| ||||||| ||||||||||| |||||||||| Sbjct: 28566448 ggcggcaagtccgactacgagagcgtccgcgacgcccgcatctccgagaacctgg 28566502 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 238 accccgagaaagaccccgaagccgccgcgggtcctcaccccgctccgccgctc 290 |||||||| | || ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 28566738 accccgaggaggaaccccaagccgccgcgtgtcctcaccccgctccgccgctc 28566790 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 34678175 gaggaggaggatcaggaggag 34678195 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 ccgaggaggaggatcaggaggaga 424 |||||||||||||| ||||||||| Sbjct: 33811050 ccgaggaggaggatgaggaggaga 33811073
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 154 cggatggagatgctcggcttgcgccgctgcgccggggagctcagcgccatctcctccg 211 |||||||||||||||||| |||||||||||||||||||| |||| |||||| |||||| Sbjct: 69433 cggatggagatgctcggcctgcgccgctgcgccggggagttcagtgccatcgcctccg 69490 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 97 ggcgacaagtccgactacgagagcatccgcgatgcccgcatctcggagaacctgg 151 |||| ||||||||||||||||||| ||||||| ||||||||||| |||||||||| Sbjct: 69254 ggcggcaagtccgactacgagagcgtccgcgacgcccgcatctccgagaacctgg 69308 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 238 accccgagaaagaccccgaagccgccgcgggtcctcaccccgctccgccgctc 290 |||||||| | || ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 69544 accccgaggaggaaccccaagccgccgcgtgtcctcaccccgctccgccgctc 69596
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 178401 gaggaggaggatcaggaggag 178381
>gb|AC141887.5| Mus musculus BAC clone RP23-478L20 from chromosome 7, complete sequence Length = 163916 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 53846 gaggaggaggatcaggaggag 53866 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 52195 gaggaggaggatcaggaggag 52215 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 50870 gaggaggaggatcaggaggag 50890 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggagga 422 |||||||||||||||||||| Sbjct: 53502 gaggaggaggatcaggagga 53521
>ref|NM_185090.1| Oryza sativa (japonica cultivar-group), mRNA Length = 691 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 51 gaggaggaggatcaggaggag 31
>gb|AC186561.1| Gasterosteus aculeatus clone VMRC28-125N12, complete sequence Length = 147166 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 399 cgccgaggaggaggatcaggaggag 423 ||||||||||||||| ||||||||| Sbjct: 70580 cgccgaggaggaggagcaggaggag 70604
>gb|AC121566.3| Mus musculus BAC clone RP23-225D10 from 1, complete sequence Length = 152435 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 127135 gaggaggaggatcaggaggag 127155 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 aggaggaggatcaggaggag 423 |||||||||||||||||||| Sbjct: 127121 aggaggaggatcaggaggag 127140
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 45820 gaggaggaggatcaggaggag 45840
>ref|NM_001033261.2| Mus musculus proline/serine-rich coiled-coil 2 (Psrc2), mRNA Length = 6956 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 769 gaggaggaggatcaggaggag 789
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 gcgacgccgcccggctccggc 330 ||||||||||||||||||||| Sbjct: 37549 gcgacgccgcccggctccggc 37569
>gb|AC009372.6| Drosophila melanogaster 3L BAC RP98-48N4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175095 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 82162 gaggaggaggatcaggaggag 82182
>ref|NM_168776.1| Drosophila melanogaster CG14073-RA, transcript variant A (CG14073), mRNA Length = 3131 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 26 gaggaggaggatcaggaggag 46
>ref|NM_140803.1| Drosophila melanogaster CG14073-RB, transcript variant B (CG14073), mRNA Length = 6922 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 3706 gaggaggaggatcaggaggag 3726
>dbj|AK145652.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0026H21 product:hypothetical Glycine-rich region profile/Serine-rich region profile containing protein, full insert sequence Length = 4095 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 770 gaggaggaggatcaggaggag 790
>dbj|AK080279.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630021N01 product:unclassifiable, full insert sequence Length = 1876 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 67 gaggaggaggatcaggaggag 47
>gb|AC155655.8| Mus musculus 6 BAC RP24-66L18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203618 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 143940 gaggaggaggatcaggaggag 143960
>gb|AC126943.5| Mus musculus BAC clone RP23-307F3 from chromosome 10, complete sequence Length = 192356 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 69655 gaggaggaggatcaggaggag 69675
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 55230 gaggaggaggatcaggaggag 55210
>dbj|AK107563.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-C02, full insert sequence Length = 827 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 61 gaggaggaggatcaggaggag 41
>gb|AE003519.3| Drosophila melanogaster chromosome 3L, section 66 of 83 of the complete sequence Length = 294542 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 179847 gaggaggaggatcaggaggag 179827
>emb|AL928735.9| Mouse DNA sequence from clone RP23-413M3 on chromosome 2, complete sequence Length = 187287 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggag 423 ||||||||||||||||||||| Sbjct: 74524 gaggaggaggatcaggaggag 74504
>gb|AC102398.12| Mus musculus chromosome 8, clone RP24-213P1, complete sequence Length = 172457 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 13217 gaggaggaggagcaggaggagaag 13240
>gb|AC114650.10| Mus musculus chromosome 3, clone RP24-151O6, complete sequence Length = 185956 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 gccgaggaggaggatcaggaggag 423 |||||||||||||| ||||||||| Sbjct: 152958 gccgaggaggaggagcaggaggag 152935
>gb|AC109296.16| Mus musculus chromosome 1, clone RP24-240J15, complete sequence Length = 161257 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 98707 gaggaggaggagcaggaggagaag 98684
>gb|AC129477.11| Mus musculus chromosome 13, clone RP23-98D15, complete sequence Length = 251066 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 222782 gaggaggaggagcaggaggagaag 222759
>gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome 16, complete sequence Length = 196946 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 97369 gaggaggaggagcaggaggagaag 97392
>ref|XM_482867.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2751 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 cggacgccgaggaggaggatcaggagga 422 |||||| |||||||||||| |||||||| Sbjct: 200 cggacgacgaggaggaggagcaggagga 227
>ref|XM_482863.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3147 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 cggacgccgaggaggaggatcaggagga 422 |||||| |||||||||||| |||||||| Sbjct: 320 cggacgacgaggaggaggagcaggagga 347
>ref|XM_470056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3143 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 ccgaggaggaggatcaggaggaga 424 |||||||||||||| ||||||||| Sbjct: 157 ccgaggaggaggatgaggaggaga 134
>ref|XM_506449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.120 mRNA Length = 629 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 gccgaggaggaggatcaggaggag 423 ||||||||||| |||||||||||| Sbjct: 197 gccgaggaggaagatcaggaggag 220
>ref|XM_479039.1| Oryza sativa (japonica cultivar-group), mRNA Length = 629 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 gccgaggaggaggatcaggaggag 423 ||||||||||| |||||||||||| Sbjct: 197 gccgaggaggaagatcaggaggag 220
>gb|AC166747.4| Mus musculus chromosome 5, clone RP23-316L10, complete sequence Length = 189572 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 171106 gaggaggaggaacaggaggagaag 171129
>gb|AC116146.14| Mus musculus chromosome 7, clone RP24-168I21, complete sequence Length = 130931 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 16637 gaggaggaggataaggaggagaag 16660
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 aggaggaggatcaggaggag 423 |||||||||||||||||||| Sbjct: 1720902 aggaggaggatcaggaggag 1720883
>gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N13, complete sequence Length = 114057 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 aggaggaggatcaggaggag 423 |||||||||||||||||||| Sbjct: 41959 aggaggaggatcaggaggag 41940
>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06, complete sequence Length = 142659 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 397 gacgccgaggaggaggatcaggaggaga 424 ||||||||||||||||| ||||||||| Sbjct: 63168 gacgccgaggaggaggaggaggaggaga 63141
>gb|AC149230.2| Pan troglodytes BAC clone CH251-557H16 from 7, complete sequence Length = 157879 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 104160 gaggaggaggagcaggaggagaag 104183
>ref|XM_430370.1| PREDICTED: Gallus gallus LOC426165 (LOC426165), mRNA Length = 692 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 445 caggagaggctgcgggtgctgcaggaga 472 ||||||||||||| ||||||| |||||| Sbjct: 253 caggagaggctgcaggtgctggaggaga 280
>gb|AC091454.2| Mus musculus chromosome X, clones RP21-438P10, RP21-382F2, RP21-118B24, Map qA7.1, complete sequences Length = 393632 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 aggaggaggatcaggaggag 423 |||||||||||||||||||| Sbjct: 268132 aggaggaggatcaggaggag 268113
>gb|AC139580.4| Mus musculus BAC clone RP23-110M15 from chromosome 13, complete sequence Length = 205480 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 137785 gaggaggaggagcaggaggagaag 137808
>gb|DQ195677.1| Oreochromis aureus SF-1 mRNA, complete cds Length = 1972 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gaggctgcgggtgctgcagg 469 |||||||||||||||||||| Sbjct: 1359 gaggctgcgggtgctgcagg 1378
>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome Length = 172764 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gacgccgcccggctccggct 331 |||||||||||||||||||| Sbjct: 62149 gacgccgcccggctccggct 62130
>gb|AC127348.4| Mus musculus BAC clone RP23-57D10 from chromosome 7, complete sequence Length = 229190 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 78715 gaggaggaggagcaggaggagaag 78738
>gb|AC186170.1| Ornithorhynchus anatinus chromosome UNK clone OABb-12B13, complete sequence Length = 134720 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 |||||| ||||||||||||||||| Sbjct: 10883 gaggagaaggatcaggaggagaag 10860
>gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome 17, complete sequence Length = 177231 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 7279 gaggaggaggagcaggaggagaag 7302
>gb|AY496440.1| Coturnix coturnix WS5 gene, complete cds Length = 6017 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 agaggctgcgggtgctgcag 468 |||||||||||||||||||| Sbjct: 3340 agaggctgcgggtgctgcag 3321
>gb|AY423269.1| Streptomyces diastaticus 108 cytochrome P450 monooxygenase (mnp1), type I polyketide synthase (mnp2), and cytochrome P450 monooxygenase (mnp3) genes, complete cds Length = 13513 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agaacctggcccggatggag 162 |||||||||||||||||||| Sbjct: 1161 agaacctggcccggatggag 1180
>ref|XM_974458.1| PREDICTED: Mus musculus hypothetical protein LOC674093 (LOC674093), mRNA Length = 1035 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 aggaggaggatcaggaggag 423 |||||||||||||||||||| Sbjct: 860 aggaggaggatcaggaggag 879
>ref|XM_920233.2| PREDICTED: Mus musculus hypothetical LOC632876 (LOC632876), mRNA Length = 903 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 232 gaggaggaggagcaggaggagaag 255
>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence, complete sequence Length = 159795 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 ccgaggaggaggatcaggaggaga 424 |||||||||||||| ||||||||| Sbjct: 152662 ccgaggaggaggatgaggaggaga 152639
>ref|XM_821151.1| Trypanosoma brucei TREU927 clone RPCI93-33N13 hypothetical protein (Tb927.7.6330) partial mRNA Length = 516 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 aggaggaggatcaggaggag 423 |||||||||||||||||||| Sbjct: 35 aggaggaggatcaggaggag 54
>gb|AF077328.2| Coturnix coturnix WS5 (WS5) mRNA, complete cds Length = 2355 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 agaggctgcgggtgctgcag 468 |||||||||||||||||||| Sbjct: 1119 agaggctgcgggtgctgcag 1100
>gb|AC127245.5| Mus musculus BAC clone RP24-422M4 from chromosome 6, complete sequence Length = 181475 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 32888 gaggaggaggagcaggaggagaag 32911 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 32792 gaggaggaggagcaggaggagaag 32815
>gb|AC131103.4| Mus musculus BAC clone RP23-213K14 from chromosome 19, complete sequence Length = 210370 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 6586 gaggaggaggagcaggaggagaag 6563
>gb|AC126271.4| Mus musculus BAC clone RP23-237H9 from chromosome 5, complete sequence Length = 194736 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 aggaggaggatcaggaggag 423 |||||||||||||||||||| Sbjct: 145152 aggaggaggatcaggaggag 145133
>gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome 9, complete sequence Length = 228144 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 207106 gaggaggaggagcaggaggagaag 207083 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 207082 gaggaggaggagcaggaggagaag 207059
>gb|AC098726.2| Mus musculus BAC clone RP23-3E20 from 17, complete sequence Length = 195690 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 156835 gaggaggaggagcaggaggagaag 156858
>gb|AC004967.3| Homo sapiens PAC clone RP5-1111F22 from 7, complete sequence Length = 138107 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 134324 gaggaggaggagcaggaggagaag 134347
>gb|AC111044.9| Mus musculus chromosome 10, clone RP23-299H4, complete sequence Length = 165614 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 135611 gaggaggaggagcaggaggagaag 135588
>gb|AC153623.8| Mus musculus 6 BAC RP23-459F14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205825 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggagga 422 |||||||||||||||||||| Sbjct: 118677 gaggaggaggatcaggagga 118658
>gb|AC110245.10| Mus musculus chromosome 3, clone RP23-251B16, complete sequence Length = 241132 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 gccgaggaggaggatcaggaggag 423 |||||||||||||| ||||||||| Sbjct: 203932 gccgaggaggaggagcaggaggag 203955
>gb|AC161500.4| Mus musculus chromosome 7, clone RP23-145H5, complete sequence Length = 223833 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 21431 gaggaggaggatgaggaggagaag 21454
>emb|AL159154.16| Human DNA sequence from clone RP11-428G23 on chromosome 13 Contains part of a novel gene (KIAA0916), complete sequence Length = 124964 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 98272 gaggaggaggagcaggaggagaag 98295
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 agaacctggcccggatggagatgc 166 ||||||||||||| |||||||||| Sbjct: 2037564 agaacctggcccgcatggagatgc 2037587
>emb|AL138920.11| Human DNA sequence from clone RP11-148B2 on chromosome 10 Contains the RAB18 gene for RAB18, member RAS oncogene family and a CpG island, complete sequence Length = 168217 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 31040 gaggaggaggagcaggaggagaag 31017
>gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genomic sequence, complete sequence Length = 126862 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 401 ccgaggaggaggatcaggaggaga 424 |||||||||||||| ||||||||| Sbjct: 91947 ccgaggaggaggatgaggaggaga 91970
>ref|NM_001031366.1| Gallus gallus A kinase (PRKA) anchor protein 8-like (AKAP8L), mRNA Length = 3376 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 445 caggagaggctgcgggtgctgcaggaga 472 ||||||||||||| ||||||| |||||| Sbjct: 2908 caggagaggctgcaggtgctggaggaga 2935
>gb|AC160391.2| Mus musculus BAC clone RP24-235G7 from chromosome 12, complete sequence Length = 186582 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 136953 gaggaggaggagcaggaggagaag 136976
>gb|AC153839.10| Mus musculus 6 BAC RP23-93A21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225351 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 31764 gaggaggaggagcaggaggagaag 31787 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 31596 gaggaggaggagcaggaggagaag 31619
>gb|AC153993.23| Mus musculus 6 BAC RP24-568N16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188187 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 83465 gaggaggaggagcaggaggagaag 83488 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 83363 gaggaggaggagcaggaggagaag 83386 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 83187 gaggaggaggagcaggaggagaag 83210
>gb|AC163902.2| Mus musculus BAC clone RP23-479B18 from chromosome 17, complete sequence Length = 190411 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 58203 gaggaggaggagcaggaggagaag 58180
>emb|AL596090.11| Mouse DNA sequence from clone RP23-135F6 on chromosome 11 Contains the 5' end of the gene for the likely ortholog of H. sapiens target of myb1-like 2 (chicken) (TOM1L2) (A730055F12Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the gene for a novel Leucine Rich Repeat domain-containing protein (4930449E07Rik), the Atpaf2 gene for ATP synthase mitochondrial F1 complex assembly factor 2, the gene for a novel protein (4933439F18Rik), an acid phosphatase 1 soluble (Acp1) pseudogene, a ribosomal protein S4, X-linked (Rps4x) pseudogene, the Drg2 gene for developmentally regulated GTP binding protein 2, the 5' end of the Myo15 gene for myosin XV and four CpG islands, complete sequence Length = 207440 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 173119 gaggaggaggagcaggaggagaag 173096
>emb|AJ851711.1| Gallus gallus mRNA for hypothetical protein, clone 20j4 Length = 3376 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 445 caggagaggctgcgggtgctgcaggaga 472 ||||||||||||| ||||||| |||||| Sbjct: 2908 caggagaggctgcaggtgctggaggaga 2935
>gb|AC156610.10| Mus musculus chromosome 7, clone RP23-331C4, complete sequence Length = 237129 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 17270 gaggaggaggataaggaggagaag 17247
>emb|AL672272.10| Mouse DNA sequence from clone RP23-47N2 on chromosome 4 Contains the Rgs3 gene for regulator of G-protein signaling 3, three novel genes and a CpG island, complete sequence Length = 184345 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 1981 gaggaggaggagcaggaggagaag 1958
>emb|AL845501.9| Mouse DNA sequence from clone RP23-194C12 on chromosome 4 Contains a ribosomal protein S18 (Rps18) pseudogene, complete sequence Length = 156572 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 1895 gaggaggaggatgaggaggagaag 1918
>emb|BX072580.4| Mouse DNA sequence from clone RP23-221P8 on chromosome 4, complete sequence Length = 15001 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 14896 gaggaggaggatgaggaggagaag 14919
>gb|AF459424.1| Rhodococcus sp. NCIMB 9784 flavin-type hydroxylase and cytochrome P450 RhF (P450RhF) genes, complete cds Length = 4411 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 agaacctggcccggatggagatgc 166 ||||||||||||| |||||||||| Sbjct: 2907 agaacctggcccgcatggagatgc 2930
>dbj|AB180844.1| Nonomuraea recticatena moxA, moxB, moxR gene for cytochrome P450 type compactin 3'',4''-hydroxylase, ferredoxin, hypothetical transcriptional regulator, complete cds Length = 2696 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agaacctggcccggatggag 162 |||||||||||||||||||| Sbjct: 1388 agaacctggcccggatggag 1407
>gb|AC079441.37| Mus musculus strain C57BL/6J clone rp23-349b16 map 17, complete sequence Length = 223005 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 24904 gaggaggaggagcaggaggagaag 24927
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence Length = 179145 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 115028 gaggaggaggataaggaggagaag 115005
>gb|AC107392.6| Homo sapiens BAC clone RP11-578K15 from 4, complete sequence Length = 93331 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 17714 gaggaggaggatgaggaggagaag 17691
>gb|AC055731.22| Homo sapiens 3 BAC RP11-588D3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152537 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 16238 gaggaggaggatgaggaggagaag 16261
>gb|AC087863.10| Homo sapiens 12q BAC RP11-357K6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179876 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 78243 gaggaggaggatgaggaggagaag 78266
>gb|AC011614.8| Drosophila melanogaster, chromosome X, region 16F-17A, BAC clone BACR48L05, complete sequence Length = 177138 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 gccgaggaggaggatcaggaggag 423 |||||||||||||| ||||||||| Sbjct: 71863 gccgaggaggaggagcaggaggag 71840
>gb|AC013724.8| Homo sapiens BAC clone RP11-319E12 from 4, complete sequence Length = 166521 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 aggaggaggatcaggaggag 423 |||||||||||||||||||| Sbjct: 120257 aggaggaggatcaggaggag 120238
>gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome 3, complete sequence Length = 202765 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 117441 gaggaggaggagcaggaggagaag 117464
>gb|S66408.1| c-erbB=proto-oncogene {exon 1, promoter} [chickens, Genomic, 700 nt] Length = 700 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 396 ggacgccgaggaggaggatcaggaggag 423 |||||||||||||||||| |||||||| Sbjct: 199 ggacgccgaggaggaggaggaggaggag 172
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 ccgccgcgacgccgcccggctccg 328 ||||||| |||||||||||||||| Sbjct: 364210 ccgccgccacgccgcccggctccg 364233
>gb|AC153359.4| Mus musculus BAC clone RP23-477I1 from chromosome 9, complete sequence Length = 195269 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 125827 gaggaggaggagcaggaggagaag 125850 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 125803 gaggaggaggagcaggaggagaag 125826
>gb|AC154711.2| Mus musculus BAC clone RP24-359E16 from chromosome 16, complete sequence Length = 199681 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 1948 gaggaggaggagcaggaggagaag 1971
>gb|AC156505.6| Mus musculus 10 BAC RP24-270N22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190789 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 96659 gaggaggaggagcaggaggagaag 96682
>ref|XM_392261.2| PREDICTED: Apis mellifera similar to ENSANGP00000015840 (LOC408726), mRNA Length = 1175 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cgccgaggaggaggatcaggagga 422 ||||||||||||| |||||||||| Sbjct: 309 cgccgaggaggagtatcaggagga 332
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 395 cggacgccgaggaggaggatcaggagga 422 |||||| |||||||||||| |||||||| Sbjct: 23048135 cggacgacgaggaggaggagcaggagga 23048108 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 cggacgccgaggaggaggatcaggagga 422 |||||| |||||||||||| |||||||| Sbjct: 23026307 cggacgacgaggaggaggagcaggagga 23026334
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 gccgaggaggaggatcaggaggag 423 ||||||||||| |||||||||||| Sbjct: 24434673 gccgaggaggaagatcaggaggag 24434650
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 397 gacgccgaggaggaggatcaggaggaga 424 ||||||||||||||||| ||||||||| Sbjct: 1750439 gacgccgaggaggaggaggaggaggaga 1750412
>gb|AC008258.4|AC008258 Drosophila melanogaster, chromosome 2R, region 43C-43C, BAC clone BACR04G20, complete sequence Length = 184079 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 25824 gaggaggaggatgaggaggagaag 25801
>gb|AY957485.1| Rhodococcus ruber cytochrome P450 monooxygenase gene, complete cds Length = 2454 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 agaacctggcccggatggagatgc 166 ||||||||||||| |||||||||| Sbjct: 1227 agaacctggcccgcatggagatgc 1250
>gb|AC108031.3| Homo sapiens BAC clone RP11-104N24 from 2, complete sequence Length = 77953 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 56692 gaggaggaggagcaggaggagaag 56669
>gb|AC067960.5| Homo sapiens BAC clone RP11-60M20 from 2, complete sequence Length = 63740 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 58250 gaggaggaggatgaggaggagaag 58273
>gb|AC091522.23| Mus musculus strain C57BL/6J chromosome 10 clone rp23-199g2, complete sequence Length = 214798 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 189985 gaggaggaggagcaggaggagaag 190008
>gb|AC132956.4| Mus musculus BAC clone RP23-106K20 from chromosome 7, complete sequence Length = 195204 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 110814 gaggaggaggatgaggaggagaag 110837
>gb|AC024076.4|AC024076 Homo sapiens chromosome 19 clone LLNLF-112A4, complete sequence Length = 39443 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 22365 gaggaggaggagcaggaggagaag 22388
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cctggcccggatggagatgc 166 |||||||||||||||||||| Sbjct: 3588924 cctggcccggatggagatgc 3588905
>dbj|AB060814.1| Oreochromis niloticus tSF-1/Ad4BP mRNA for SF-1/Ad4BP, complete cds Length = 1461 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gaggctgcgggtgctgcagg 469 |||||||||||||||||||| Sbjct: 1137 gaggctgcgggtgctgcagg 1156
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 gccgaggaggaggatcaggaggag 423 ||||||||||| |||||||||||| Sbjct: 60540 gccgaggaggaagatcaggaggag 60517
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 395 cggacgccgaggaggaggatcaggagga 422 |||||| |||||||||||| |||||||| Sbjct: 107863 cggacgacgaggaggaggagcaggagga 107836 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 cggacgccgaggaggaggatcaggagga 422 |||||| |||||||||||| |||||||| Sbjct: 86035 cggacgacgaggaggaggagcaggagga 86062
>dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098A20, full insert sequence Length = 3147 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 cggacgccgaggaggaggatcaggagga 422 |||||| |||||||||||| |||||||| Sbjct: 320 cggacgacgaggaggaggagcaggagga 347
>dbj|AP003062.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-555G19, complete sequence Length = 171428 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 76278 gaggaggaggagcaggaggagaag 76255
>dbj|AK105814.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C08, full insert sequence Length = 629 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 gccgaggaggaggatcaggaggag 423 ||||||||||| |||||||||||| Sbjct: 197 gccgaggaggaagatcaggaggag 220
>ref|NM_207905.1| Eremothecium gossypii AAR011Cp (AAR011C), mRNA Length = 2244 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ccgccgcgacgccgcccggctccg 328 ||||||| |||||||||||||||| Sbjct: 166 ccgccgccacgccgcccggctccg 143
>emb|AL390799.4|CNS06C7Q Human chromosome 14 DNA sequence BAC R-21A20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169234 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 124289 gaggaggaggagcaggaggagaag 124312
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 gctgcgggtgctgcaggaga 472 |||||||||||||||||||| Sbjct: 3375376 gctgcgggtgctgcaggaga 3375395
>emb|V01555.2|EBV Epstein-Barr virus (EBV) genome, strain B95-8 Length = 172281 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gacgccgcccggctccggct 331 |||||||||||||||||||| Sbjct: 74306 gacgccgcccggctccggct 74287
>dbj|AK062681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-H05, full insert sequence Length = 629 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 gccgaggaggaggatcaggaggag 423 ||||||||||| |||||||||||| Sbjct: 197 gccgaggaggaagatcaggaggag 220
>gb|AC153569.4| Mus musculus 10 BAC RP23-225D5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 193135 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 75235 gaggaggaggagcaggaggagaag 75258
>gb|AE003841.5| Drosophila melanogaster chromosome 2R, section 9 of 73 of the complete sequence Length = 266427 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 182088 gaggaggaggatgaggaggagaag 182065
>emb|X15819.1|OSNIA112 Oryza sativa partial nia1 gene for nitrate reductase apoenzyme, exons 1-2 and joined CDS Length = 1700 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 cggacgccgaggaggaggatcaggagga 422 |||||| |||||||||||| |||||||| Sbjct: 487 cggacgacgaggaggaggagcaggagga 514
>gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 of 74 of the complete sequence Length = 290619 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 gccgaggaggaggatcaggaggag 423 |||||||||||||| ||||||||| Sbjct: 14228 gccgaggaggaggagcaggaggag 14251
>gb|AC108421.8| Mus musculus chromosome 19, clone RP23-433N7, complete sequence Length = 190980 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 113898 gaggaggaggagcaggaggagaag 113875
>gb|AC102602.9| Mus musculus chromosome 9, clone RP23-381L11, complete sequence Length = 253504 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 201780 gaggaggaggagcaggaggagaag 201803
>gb|AC087416.18| Mus musculus strain C57BL/6J chromosome 2 clone rp23-224l16, complete sequence Length = 183349 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 94807 gaggaggaggagcaggaggagaag 94830
>gb|AY961628.3| Human herpesvirus 4 strain GD1, complete genome Length = 171657 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gacgccgcccggctccggct 331 |||||||||||||||||||| Sbjct: 62031 gacgccgcccggctccggct 62012
>gb|AC109616.9| Mus musculus chromosome 19, clone RP23-449C1, complete sequence Length = 167801 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 83713 gaggaggaggagcaggaggagaag 83690
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 tacgagagcatccgcgatgc 131 |||||||||||||||||||| Sbjct: 455339 tacgagagcatccgcgatgc 455320
>gb|AC005452.1|AC005452 Drosophila melanogaster, chromosome 2R, region 43B2-43C2, P1 clone DS07185, complete sequence Length = 79333 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 10478 gaggaggaggatgaggaggagaag 10501
>emb|AJ507799.2|HHV507799 Human herpesvirus 4 complete wild type genome Length = 171823 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gacgccgcccggctccggct 331 |||||||||||||||||||| Sbjct: 62018 gacgccgcccggctccggct 61999
>emb|CT009759.12| Mouse DNA sequence from clone RP23-213P21 on chromosome 13, complete sequence Length = 199967 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 150755 gaggaggaggagcaggaggagaag 150732
>gb|AC154191.1| Mus musculus BAC clone RP24-70A10 from 16, complete sequence Length = 143978 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 70362 gaggaggaggagcaggaggagaag 70385
>gb|AC138118.4| Mus musculus BAC clone RP24-219A21 from 8, complete sequence Length = 168752 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 163307 gaggaggaggagcaggaggagaag 163330
>gb|AC135353.3| Mus musculus BAC clone RP24-401C17 from 9, complete sequence Length = 132290 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 121716 gaggaggaggagcaggaggagaag 121693
>gb|AC149611.6| Mus musculus BAC clone RP23-157P4 from 7, complete sequence Length = 217353 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 46202 gaggaggaggagcaggaggagaag 46179
>emb|AL844536.13| Mouse DNA sequence from clone RP23-22A15 on chromosome 2, complete sequence Length = 245993 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 164065 gaggaggaggagcaggaggagaag 164088
>emb|AL840624.14| Mouse DNA sequence from clone RP23-183D3 on chromosome X, complete sequence Length = 124795 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 aggaggaggatcaggaggag 423 |||||||||||||||||||| Sbjct: 68159 aggaggaggatcaggaggag 68140
>gb|AC164122.5| Mus musculus BAC clone RP24-409O23 from chromosome 6, complete sequence Length = 165015 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 85755 gaggaggaggagcaggaggagaag 85778 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 85659 gaggaggaggagcaggaggagaag 85682
>gb|AC114988.21| Mus musculus chromosome 7, clone RP23-207N5, complete sequence Length = 196013 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 127180 gaggaggaggatgaggaggagaag 127157
>gb|AC139760.5| Mus musculus BAC clone RP23-346P9 from chromosome 10, complete sequence Length = 184319 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 114609 gaggaggaggagcaggaggagaag 114632
>gb|M80517.1|HS4B958RAJ Epstein-Barr virus, artifactual joining of B95-8 complete genome and the sequences from Raji of the large deletion found in B95-8 Length = 184113 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gacgccgcccggctccggct 331 |||||||||||||||||||| Sbjct: 74306 gacgccgcccggctccggct 74287
>emb|AL831766.3| Mouse DNA sequence from clone RP23-209N3 on chromosome 2, complete sequence Length = 178227 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 23907 gaggaggaggagcaggaggagaag 23930 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 23713 gaggaggaggagcaggaggagaag 23736
>emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chromosome 4, complete sequence Length = 171424 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 114733 gaggaggaggagcaggaggagaag 114710
>emb|AL805918.5| Mouse DNA sequence from clone RP23-191L7 on chromosome 2, complete sequence Length = 213625 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 134484 gaggaggaggagcaggaggagaag 134507
>gb|AC136741.24| Mus musculus chromosome 7, clone RP23-172P1, complete sequence Length = 211802 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gaggaggaggatcaggaggagaag 426 |||||||||||| ||||||||||| Sbjct: 34165 gaggaggaggatgaggaggagaag 34142
>gb|AC154653.2| Mus musculus BAC clone RP24-262N5 from chromosome 16, complete sequence Length = 164851 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 47449 gaggaggaggagcaggaggagaag 47472 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gaggaggaggatcaggaggagaag 426 ||||||||||| |||||||||||| Sbjct: 47240 gaggaggaggagcaggaggagaag 47263 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,951,523 Number of Sequences: 3902068 Number of extensions: 2951523 Number of successful extensions: 79955 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78180 Number of HSP's gapped (non-prelim): 1775 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
