ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast39g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197761.1| Oryza sativa (japonica cultivar-group) putative... 74 3e-10
2gb|AY341826.1| Oryza sativa (japonica cultivar-group) AP2 domain... 74 3e-10
3gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 gen... 74 3e-10
4gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 74 3e-10
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 74 3e-10
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 74 3e-10
7ref|XM_479794.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.31
8ref|XM_507100.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.31
9gb|AY224521.1| Oryza sativa (japonica cultivar-group) isolate 20... 44 0.31
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
11dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.31
12dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
13dbj|AK103863.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.31
14dbj|AK059891.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.31
15dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.31
16dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic... 44 0.31
17gb|AC102519.13| Mus musculus chromosome 18, clone RP24-560I9, co... 42 1.2
18gb|AC158990.2| Mus musculus BAC clone RP23-416E18 from chromosom... 42 1.2
19ref|XM_419635.1| PREDICTED: Gallus gallus similar to G2 (LOC4215... 42 1.2
20gb|AC090032.2| Canis familiaris clone RP81-386E20, complete sequ... 42 1.2
21emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chro... 42 1.2
22gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome... 42 1.2
23emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on ch... 42 1.2
24gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Can... 42 1.2
25gb|AE005819.1| Caulobacter crescentus CB15 section 145 of 359 of... 42 1.2
26gb|AC107992.3| Homo sapiens chromosome 15, clone RP11-150L8, com... 42 1.2
27gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, co... 42 1.2
28gb|AC127185.3| Rattus norvegicus BAC CH230-28E5 (Children's Hos... 42 1.2
29dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
30dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
31gb|AC154311.2| Mus musculus BAC clone RP23-359C9 from 16, comple... 42 1.2
32gb|AC140264.2| Mus musculus BAC clone RP23-316F10 from 10, compl... 42 1.2
33gb|AC167970.4| Mus musculus BAC clone RP24-471H15 from chromosom... 40 4.8
34ref|XM_550443.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
35ref|XM_550442.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
36gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome... 40 4.8
37ref|XM_474058.1| Oryza sativa (japonica cultivar-group), predic... 40 4.8
38ref|XM_470006.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
39ref|NM_184741.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
40ref|NM_192834.1| Oryza sativa (japonica cultivar-group), predic... 40 4.8
41gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, co... 40 4.8
42gb|AC008201.8| Drosophila melanogaster clone BACR11E07, complete... 40 4.8
43gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
44gb|BC060972.1| Mus musculus U2 small nuclear RNA auxiliary facto... 40 4.8
45gb|BC057315.1| Mus musculus hypothetical protein MGC30332, mRNA ... 40 4.8
46ref|XM_959873.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.8
47ref|XM_330542.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.8
48gb|AC034254.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 4.8
49gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.8
50gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom... 40 4.8
51ref|XM_619904.3| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 g... 40 4.8
52ref|XM_915991.2| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 g... 40 4.8
53gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 4.8
54gb|BC051477.1| Mus musculus U2 small nuclear RNA auxiliary facto... 40 4.8
55gb|BC031744.1| Mus musculus cDNA clone IMAGE:4482075, with appar... 40 4.8
56gb|AC132588.4| Mus musculus BAC clone RP24-258L16 from chromosom... 40 4.8
57gb|AC146478.2| Pan troglodytes BAC clone CH251-409D17 from Y, co... 40 4.8
58emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4,... 40 4.8
59emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4,... 40 4.8
60emb|AJ721111.1| Gallus gallus partial mRNA for hypothetical prot... 40 4.8
61dbj|BS000632.2| Pan troglodytes chromosome Y clone: PTB-399O20, ... 40 4.8
62gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 4.8
63dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 4.8
64ref|NM_079740.2| Drosophila melanogaster Tat-binding protein-1 C... 40 4.8
65dbj|AK133299.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 4.8
66dbj|AK160974.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 4.8
67gb|AC162178.2| Mus musculus BAC clone RP23-410H21 from chromosom... 40 4.8
68gb|BC045900.1| Danio rerio nucleolar protein family A, member 1 ... 40 4.8
69gb|AC160409.6| Mus musculus 10 BAC RP23-184O11 (Roswell Park Can... 40 4.8
70ref|NM_200975.1| Danio rerio nucleolar protein family A, member ... 40 4.8
71gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A... 40 4.8
72dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
73dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
74dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
75dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
76dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
77gb|AC119873.38| Mus musculus chromosome 3, clone RP24-275F18, co... 40 4.8
78gb|AC008223.4|AC008223 Drosophila melanogaster, chromosome 3R, r... 40 4.8
79gb|AC004617.2|AC004617 Homo sapiens chromosome Y, clone 264,M,20... 40 4.8
80dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
81gb|AF160882.1| Drosophila melanogaster GH12068 full insert cDNA 40 4.8
82gb|AF145305.1|AF145305 Drosophila melanogaster 26S proteasome re... 40 4.8
83dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
84dbj|AK214674.1| Mus musculus cDNA, clone:Y2G0132J11, strand:minu... 40 4.8
85dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 4.8
86dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
87gb|AC011506.3|AC011506 Homo sapiens chromosome 19 clone CTD-2086... 40 4.8
88dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
89dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.8
90dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
91dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
92emb|BX004839.9| Zebrafish DNA sequence from clone DKEY-18A23 in ... 40 4.8
93dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
94dbj|AK110242.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
95dbj|AK103829.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
96dbj|AK100587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
97emb|AJ326831.1|HSA326831 Homo sapiens genomic sequence surroundi... 40 4.8
98dbj|AK071753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
99dbj|AK070319.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
100emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 4.8
101dbj|AK060638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
102gb|AF134402.1|AF134402 Drosophila melanogaster Tat-binding prote... 40 4.8
103gb|AE003744.3| Drosophila melanogaster chromosome 3R, section 82... 40 4.8
104gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 40 4.8
105gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 4.8
106gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 4.8
107ref|NM_170760.2| Mus musculus U2 small nuclear RNA auxiliary fac... 40 4.8
108gb|AC149609.5| Mus musculus BAC clone RP23-442K4 from 7, complet... 40 4.8
109emb|AJ697969.1| Pseudomonas phage phiEL complete genome 40 4.8 
>ref|NM_197761.1| Oryza sativa (japonica cultivar-group) putative ethylene-responsive
           element  binding  protein (OSJNBb0089A17.16), mRNA
          Length = 822

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 132 accagcacctcgacctcatccgcgcccacctcctcga 168
           |||||||||||||||||||||||||||||||||||||
Sbjct: 20  accagcacctcgacctcatccgcgcccacctcctcga 56
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>gb|AY341826.1| Oryza sativa (japonica cultivar-group) AP2 domain-containing
           protein AP28 mRNA, complete cds
          Length = 1145

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 132 accagcacctcgacctcatccgcgcccacctcctcga 168
           |||||||||||||||||||||||||||||||||||||
Sbjct: 113 accagcacctcgacctcatccgcgcccacctcctcga 149
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>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete
              sequence
          Length = 132927

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                   
Query: 132    accagcacctcgacctcatccgcgcccacctcctcga 168
              |||||||||||||||||||||||||||||||||||||
Sbjct: 125552 accagcacctcgacctcatccgcgcccacctcctcga 125588
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>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence,
            complete sequence
          Length = 141307

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                 
Query: 132  accagcacctcgacctcatccgcgcccacctcctcga 168
            |||||||||||||||||||||||||||||||||||||
Sbjct: 8331 accagcacctcgacctcatccgcgcccacctcctcga 8367
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                     
Query: 132      accagcacctcgacctcatccgcgcccacctcctcga 168
                |||||||||||||||||||||||||||||||||||||
Sbjct: 21693648 accagcacctcgacctcatccgcgcccacctcctcga 21693684
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                     
Query: 132      accagcacctcgacctcatccgcgcccacctcctcga 168
                |||||||||||||||||||||||||||||||||||||
Sbjct: 21705311 accagcacctcgacctcatccgcgcccacctcctcga 21705347
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>ref|XM_479794.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 896

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 139 cctcgacctcatccgcgcccacctcc 164
           |||||||||||| |||||||||||||
Sbjct: 334 cctcgacctcatgcgcgcccacctcc 359
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>ref|XM_507100.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470F10.20 mRNA
          Length = 931

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 139 cctcgacctcatccgcgcccacctcc 164
           |||||||||||| |||||||||||||
Sbjct: 364 cctcgacctcatgcgcgcccacctcc 389
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>gb|AY224521.1| Oryza sativa (japonica cultivar-group) isolate 20551 putative
           serine/threonine kinase mRNA, complete cds
          Length = 447

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 139 cctcgacctcatccgcgcccacctcc 164
           |||||||||||| |||||||||||||
Sbjct: 204 cctcgacctcatgcgcgcccacctcc 229
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 139    cctcgacctcatccgcgcccacctcc 164
              |||||||||||| |||||||||||||
Sbjct: 963540 cctcgacctcatgcgcgcccacctcc 963515



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 341     caggaggaggaggacgacga 360
               ||||||||||||||||||||
Sbjct: 4312362 caggaggaggaggacgacga 4312343
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 164     ctcgacgacctccacgccgacgccctcgcc 193
               |||||||||| ||| |||||||||||||||
Sbjct: 3575983 ctcgacgaccaccatgccgacgccctcgcc 3576012



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 164     ctcgacgacctccacgccgacgccctcgcc 193
               |||||||||| ||| |||||||||||||||
Sbjct: 3571420 ctcgacgaccaccatgccgacgccctcgcc 3571449
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>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470F10
          Length = 185294

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 139    cctcgacctcatccgcgcccacctcc 164
              |||||||||||| |||||||||||||
Sbjct: 126278 cctcgacctcatgcgcgcccacctcc 126253
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>dbj|AK103863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149E23, full
           insert sequence
          Length = 896

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 139 cctcgacctcatccgcgcccacctcc 164
           |||||||||||| |||||||||||||
Sbjct: 334 cctcgacctcatgcgcgcccacctcc 359
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>dbj|AK059891.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D03, full
           insert sequence
          Length = 931

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 139 cctcgacctcatccgcgcccacctcc 164
           |||||||||||| |||||||||||||
Sbjct: 364 cctcgacctcatgcgcgcccacctcc 389
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>dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-23I22, complete
             sequence
          Length = 152472

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 333   tggagggacaggaggaggagga 354
             ||||||||||||||||||||||
Sbjct: 90358 tggagggacaggaggaggagga 90337
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>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster
          Length = 104326

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 164   ctcgacgacctccacgccgacgccctcgcc 193
             |||||||||| ||| |||||||||||||||
Sbjct: 66385 ctcgacgaccaccatgccgacgccctcgcc 66356



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 164   ctcgacgacctccacgccgacgccctcgcc 193
             |||||||||| ||| |||||||||||||||
Sbjct: 61822 ctcgacgaccaccatgccgacgccctcgcc 61793
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>gb|AC102519.13| Mus musculus chromosome 18, clone RP24-560I9, complete sequence
          Length = 186140

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 334    ggagggacaggaggaggagga 354
              |||||||||||||||||||||
Sbjct: 120711 ggagggacaggaggaggagga 120691



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 334    ggagggacaggaggaggagga 354
              |||||||||||||||||||||
Sbjct: 120675 ggagggacaggaggaggagga 120655
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>gb|AC158990.2| Mus musculus BAC clone RP23-416E18 from chromosome 13, complete sequence
          Length = 191036

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 305    cagcctcagcaggagagctgc 325
              |||||||||||||||||||||
Sbjct: 173017 cagcctcagcaggagagctgc 172997
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>ref|XM_419635.1| PREDICTED: Gallus gallus similar to G2 (LOC421598), mRNA
          Length = 8107

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 334  ggagggacaggaggaggagga 354
            |||||||||||||||||||||
Sbjct: 7400 ggagggacaggaggaggagga 7380
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>gb|AC090032.2| Canis familiaris clone RP81-386E20, complete sequence
          Length = 197836

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 229    gccgcccgggcggcggaggccggcg 253
              ||||| |||||||||||||||||||
Sbjct: 122062 gccgcgcgggcggcggaggccggcg 122086
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>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete
              sequence
          Length = 220233

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 305    cagcctcagcaggagagctgc 325
              |||||||||||||||||||||
Sbjct: 136554 cagcctcagcaggagagctgc 136574
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>gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome 10, complete sequence
          Length = 178858

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 334   ggagggacaggaggaggagga 354
             |||||||||||||||||||||
Sbjct: 28892 ggagggacaggaggaggagga 28912
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>emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on chromosome 10 Contains two
             novel genes (FLJ36774) and five CpG islands, complete
             sequence
          Length = 158335

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 299   gagcggcagcctcagcaggag 319
             |||||||||||||||||||||
Sbjct: 91267 gagcggcagcctcagcaggag 91287
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>gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186968

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 291    tggtcctggagcggcagcctcagca 315
              |||||||||| ||||||||||||||
Sbjct: 184388 tggtcctggaccggcagcctcagca 184364
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>gb|AE005819.1| Caulobacter crescentus CB15 section 145 of 359 of the complete genome
          Length = 10591

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  tcctcgacgacctccacgccg 182
            |||||||||||||||||||||
Sbjct: 4706 tcctcgacgacctccacgccg 4686
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>gb|AC107992.3| Homo sapiens chromosome 15, clone RP11-150L8, complete sequence
          Length = 149015

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 326   ggctacgtggagggacaggaggaggagga 354
             |||||||||||||| | ||||||||||||
Sbjct: 85849 ggctacgtggagggcctggaggaggagga 85821
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>gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, complete sequence
          Length = 181991

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 332   gtggagggacaggaggaggag 352
             |||||||||||||||||||||
Sbjct: 57996 gtggagggacaggaggaggag 58016
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>gb|AC127185.3| Rattus norvegicus  BAC CH230-28E5 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 233648

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 303    ggcagcctcagcaggagagct 323
              |||||||||||||||||||||
Sbjct: 105297 ggcagcctcagcaggagagct 105277
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 163     cctcgacgacctccacgccgacgcc 187
               |||||||||||||| ||||||||||
Sbjct: 8076321 cctcgacgacctccccgccgacgcc 8076297



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 338      ggacaggaggaggaggacga 357
                ||||||||||||||||||||
Sbjct: 31664514 ggacaggaggaggaggacga 31664495
to top
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0503B05
          Length = 156814

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 163   cctcgacgacctccacgccgacgcc 187
             |||||||||||||| ||||||||||
Sbjct: 64514 cctcgacgacctccccgccgacgcc 64490
to top
>gb|AC154311.2| Mus musculus BAC clone RP23-359C9 from 16, complete sequence
          Length = 194103

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 334   ggagggacaggaggaggagga 354
             |||||||||||||||||||||
Sbjct: 32412 ggagggacaggaggaggagga 32432
to top
>gb|AC140264.2| Mus musculus BAC clone RP23-316F10 from 10, complete sequence
          Length = 176292

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 334   ggagggacaggaggaggagga 354
             |||||||||||||||||||||
Sbjct: 40284 ggagggacaggaggaggagga 40264
to top
>gb|AC167970.4| Mus musculus BAC clone RP24-471H15 from chromosome 7, complete sequence
          Length = 238950

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   ggagggacaggaggaggagg 353
             ||||||||||||||||||||
Sbjct: 54958 ggagggacaggaggaggagg 54977
to top
>ref|XM_550443.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1453

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 cgcccacctcctcgacgacc 173
           ||||||||||||||||||||
Sbjct: 55  cgcccacctcctcgacgacc 74
to top
>ref|XM_550442.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1819

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 cgcccacctcctcgacgacc 173
           ||||||||||||||||||||
Sbjct: 120 cgcccacctcctcgacgacc 139
to top
>gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome 7, complete sequence
          Length = 214959

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    ggagggacaggaggaggagg 353
              ||||||||||||||||||||
Sbjct: 189666 ggagggacaggaggaggagg 189685
to top
>ref|XM_474058.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 906

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 228 cgccgcccgggcggcggaggccgg 251
           ||||||||| ||||||||||||||
Sbjct: 146 cgccgcccgtgcggcggaggccgg 169
to top
>ref|XM_470006.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1452

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  cgacctccacgccgacgccc 188
            ||||||||||||||||||||
Sbjct: 1234 cgacctccacgccgacgccc 1215
to top
>ref|NM_184741.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2442

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 341 caggaggaggaggacgacga 360
           ||||||||||||||||||||
Sbjct: 601 caggaggaggaggacgacga 620
to top
>ref|NM_192834.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1443

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 163 cctcgacgacctccacgccgacgc 186
           |||||||||||||| |||||||||
Sbjct: 219 cctcgacgacctccccgccgacgc 242
to top
>gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, complete sequence
          Length = 222121

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 332    gtggagggacaggaggaggaggacgacg 359
              ||||||| | ||||||||||||||||||
Sbjct: 106089 gtggaggaagaggaggaggaggacgacg 106062
to top
>gb|AC008201.8| Drosophila melanogaster clone BACR11E07, complete sequence
          Length = 190153

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   acaggaggaggaggacgacg 359
             ||||||||||||||||||||
Sbjct: 72700 acaggaggaggaggacgacg 72719
to top
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
            OSJNBb0031H05, complete sequence
          Length = 141200

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  caggaggaggaggacgacga 360
            ||||||||||||||||||||
Sbjct: 5342 caggaggaggaggacgacga 5361
to top
>gb|BC060972.1| Mus musculus U2 small nuclear RNA auxiliary factor 1-like 4, mRNA
           (cDNA clone MGC:74063 IMAGE:6593404), complete cds
          Length = 892

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 334 ggagggacaggaggaggagg 353
           ||||||||||||||||||||
Sbjct: 833 ggagggacaggaggaggagg 814
to top
>gb|BC057315.1| Mus musculus hypothetical protein MGC30332, mRNA (cDNA clone
           IMAGE:6811485), partial cds
          Length = 2910

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 334 ggagggacaggaggaggagg 353
           ||||||||||||||||||||
Sbjct: 916 ggagggacaggaggaggagg 897
to top
>ref|XM_959873.1| Neurospora crassa OR74A hypothetical protein (NCU03107.1) partial
            mRNA
          Length = 1707

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 334  ggagggacaggaggaggaggacga 357
            ||||||| ||||||||||||||||
Sbjct: 1557 ggagggagaggaggaggaggacga 1580
to top
>ref|XM_330542.1| Neurospora crassa OR74A hypothetical protein (NCU03107.1) partial
            mRNA
          Length = 1707

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 334  ggagggacaggaggaggaggacga 357
            ||||||| ||||||||||||||||
Sbjct: 1557 ggagggagaggaggaggaggacga 1580
to top
>gb|AC034254.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-257K10, complete
             sequence
          Length = 116022

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 334   ggagggacaggaggaggaggacga 357
             ||||||| ||||||||||||||||
Sbjct: 90465 ggagggagaggaggaggaggacga 90442
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 169      cgacctccacgccgacgccc 188
                ||||||||||||||||||||
Sbjct: 33295349 cgacctccacgccgacgccc 33295368



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 341      caggaggaggaggacgacga 360
                ||||||||||||||||||||
Sbjct: 20254071 caggaggaggaggacgacga 20254052
to top
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   cgacctccacgccgacgccc 188
             ||||||||||||||||||||
Sbjct: 51865 cgacctccacgccgacgccc 51884
to top
>ref|XM_619904.3| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 gene (4932431H17Rik),
           mRNA
          Length = 2195

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 334 ggagggacaggaggaggagg 353
           ||||||||||||||||||||
Sbjct: 187 ggagggacaggaggaggagg 206
to top
>ref|XM_915991.2| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 gene (4932431H17Rik),
           mRNA
          Length = 1591

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 334 ggagggacaggaggaggagg 353
           ||||||||||||||||||||
Sbjct: 187 ggagggacaggaggaggagg 206
to top
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    cgctgccgccgaagccggcc 283
              ||||||||||||||||||||
Sbjct: 362032 cgctgccgccgaagccggcc 362051
to top
>gb|BC051477.1| Mus musculus U2 small nuclear RNA auxiliary factor 1-like 4, mRNA
           (cDNA clone IMAGE:1513450), with apparent retained
           intron
          Length = 701

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 334 ggagggacaggaggaggagg 353
           ||||||||||||||||||||
Sbjct: 644 ggagggacaggaggaggagg 625
to top
>gb|BC031744.1| Mus musculus cDNA clone IMAGE:4482075, with apparent retained
           intron
          Length = 2735

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 334 ggagggacaggaggaggagg 353
           ||||||||||||||||||||
Sbjct: 818 ggagggacaggaggaggagg 799
to top
>gb|AC132588.4| Mus musculus BAC clone RP24-258L16 from chromosome 10, complete sequence
          Length = 136807

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    ggagggacaggaggaggagg 353
              ||||||||||||||||||||
Sbjct: 117516 ggagggacaggaggaggagg 117535
to top
>gb|AC146478.2| Pan troglodytes BAC clone CH251-409D17 from Y, complete sequence
          Length = 149556

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   gagggacaggaggaggagga 354
             ||||||||||||||||||||
Sbjct: 91828 gagggacaggaggaggagga 91847
to top
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
             complete sequence
          Length = 153643

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 228   cgccgcccgggcggcggaggccgg 251
             ||||||||| ||||||||||||||
Sbjct: 17846 cgccgcccgtgcggcggaggccgg 17869
to top
>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13,
              complete sequence
          Length = 123480

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 228    cgccgcccgggcggcggaggccgg 251
              ||||||||| ||||||||||||||
Sbjct: 115913 cgccgcccgtgcggcggaggccgg 115936
to top
>emb|AJ721111.1| Gallus gallus partial mRNA for hypothetical protein, clone 35i4
          Length = 380

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 caggaggaggaggacgacga 360
           ||||||||||||||||||||
Sbjct: 62  caggaggaggaggacgacga 43
to top
>dbj|BS000632.2| Pan troglodytes chromosome Y clone: PTB-399O20, complete sequence
          Length = 199770

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    gagggacaggaggaggagga 354
              ||||||||||||||||||||
Sbjct: 116530 gagggacaggaggaggagga 116549
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 335      gagggacaggaggaggagga 354
                ||||||||||||||||||||
Sbjct: 17605891 gagggacaggaggaggagga 17605872
to top
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      gtgactcctccctctcagcc 98
               ||||||||||||||||||||
Sbjct: 1569672 gtgactcctccctctcagcc 1569691
to top
>ref|NM_079740.2| Drosophila melanogaster Tat-binding protein-1 CG10370-RA (Tbp-1),
           mRNA
          Length = 1628

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 acaggaggaggaggacgacg 359
           ||||||||||||||||||||
Sbjct: 406 acaggaggaggaggacgacg 425
to top
>dbj|AK133299.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932431H17 product:hypothetical Glutamic
           acid-rich region profile containing protein, full insert
           sequence
          Length = 2789

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 334 ggagggacaggaggaggagg 353
           ||||||||||||||||||||
Sbjct: 188 ggagggacaggaggaggagg 207
to top
>dbj|AK160974.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:4022425H17 product:U2 small nuclear RNA
           auxiliary factor 1-like 4, full insert sequence
          Length = 3009

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 334 ggagggacaggaggaggagg 353
           ||||||||||||||||||||
Sbjct: 830 ggagggacaggaggaggagg 811
to top
>gb|AC162178.2| Mus musculus BAC clone RP23-410H21 from chromosome 6, complete sequence
          Length = 188061

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 334   ggagggacaggaggaggaggacga 357
             ||||||| ||||||||||||||||
Sbjct: 87529 ggagggagaggaggaggaggacga 87506
to top
>gb|BC045900.1| Danio rerio nucleolar protein family A, member 1 (H/ACA small
           nucleolar RNPs), mRNA (cDNA clone MGC:56086
           IMAGE:5410477), complete cds
          Length = 1284

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 331 cgtggagggacaggaggaggagga 354
           |||||||||| |||||||||||||
Sbjct: 562 cgtggagggagaggaggaggagga 585
to top
>gb|AC160409.6| Mus musculus 10 BAC RP23-184O11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209766

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    ggagggacaggaggaggagg 353
              ||||||||||||||||||||
Sbjct: 206639 ggagggacaggaggaggagg 206620
to top
>ref|NM_200975.1| Danio rerio nucleolar protein family A, member 1 (H/ACA small
           nucleolar RNPs) (nola1), mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 331 cgtggagggacaggaggaggagga 354
           |||||||||| |||||||||||||
Sbjct: 562 cgtggagggagaggaggaggagga 585
to top
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete
             sequence
          Length = 156929

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   caggaggaggaggacgacga 360
             ||||||||||||||||||||
Sbjct: 49378 caggaggaggaggacgacga 49359
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 228      cgccgcccgggcggcggaggccgg 251
                ||||||||| ||||||||||||||
Sbjct: 32499112 cgccgcccgtgcggcggaggccgg 32499135
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 341      caggaggaggaggacgacga 360
                ||||||||||||||||||||
Sbjct: 21548716 caggaggaggaggacgacga 21548735
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    cgcccacctcctcgacgacc 173
              ||||||||||||||||||||
Sbjct: 307589 cgcccacctcctcgacgacc 307570
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 169      cgacctccacgccgacgccc 188
                ||||||||||||||||||||
Sbjct: 33385859 cgacctccacgccgacgccc 33385878



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 341      caggaggaggaggacgacga 360
                ||||||||||||||||||||
Sbjct: 20247100 caggaggaggaggacgacga 20247081
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 163      cctcgacgacctccacgccgacgc 186
                |||||||||||||| |||||||||
Sbjct: 24709505 cctcgacgacctccccgccgacgc 24709482



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 163      cctcgacgacctccacgccgacgc 186
                |||||||||||||| |||||||||
Sbjct: 14129338 cctcgacgacctccccgccgacgc 14129361
to top
>gb|AC119873.38| Mus musculus chromosome 3, clone RP24-275F18, complete sequence
          Length = 183408

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    ggagggacaggaggaggagg 353
              ||||||||||||||||||||
Sbjct: 114499 ggagggacaggaggaggagg 114480
to top
>gb|AC008223.4|AC008223 Drosophila melanogaster, chromosome 3R, region 95A-95A, BAC clone
              BACR16I18, complete sequence
          Length = 161278

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    acaggaggaggaggacgacg 359
              ||||||||||||||||||||
Sbjct: 146764 acaggaggaggaggacgacg 146783
to top
>gb|AC004617.2|AC004617 Homo sapiens chromosome Y, clone 264,M,20, complete sequence
          Length = 175223

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   gagggacaggaggaggagga 354
             ||||||||||||||||||||
Sbjct: 60998 gagggacaggaggaggagga 60979
to top
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1040D09
          Length = 148102

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 163    cctcgacgacctccacgccgacgc 186
              |||||||||||||| |||||||||
Sbjct: 135468 cctcgacgacctccccgccgacgc 135445
to top
>gb|AF160882.1| Drosophila melanogaster GH12068 full insert cDNA
          Length = 1611

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 acaggaggaggaggacgacg 359
           ||||||||||||||||||||
Sbjct: 375 acaggaggaggaggacgacg 394
to top
>gb|AF145305.1|AF145305 Drosophila melanogaster 26S proteasome regulatory complex subunit
           p50 mRNA, complete cds
          Length = 1287

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 acaggaggaggaggacgacg 359
           ||||||||||||||||||||
Sbjct: 270 acaggaggaggaggacgacg 289
to top
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0054L03
          Length = 183623

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   caggaggaggaggacgacga 360
             ||||||||||||||||||||
Sbjct: 75156 caggaggaggaggacgacga 75137
to top
>dbj|AK214674.1| Mus musculus cDNA, clone:Y2G0132J11, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000043273, based on BLAT search
          Length = 227

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 334 ggagggacaggaggaggagg 353
           ||||||||||||||||||||
Sbjct: 172 ggagggacaggaggaggagg 153
to top
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    caggaggaggaggacgacga 360
              ||||||||||||||||||||
Sbjct: 430430 caggaggaggaggacgacga 430411
to top
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0489D11
          Length = 150757

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    caggaggaggaggacgacga 360
              ||||||||||||||||||||
Sbjct: 110326 caggaggaggaggacgacga 110345
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>gb|AC011506.3|AC011506 Homo sapiens chromosome 19 clone CTD-2086L14, complete sequence
          Length = 100110

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 30    ctctccagactccagccaccagcc 53
             ||||||| ||||||||||||||||
Sbjct: 70442 ctctccatactccagccaccagcc 70419
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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644B06
          Length = 194509

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   cgcccacctcctcgacgacc 173
             ||||||||||||||||||||
Sbjct: 17542 cgcccacctcctcgacgacc 17523
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 224     tcgtcgccgcccgggcggcggagg 247
               ||||||||||||||||||| ||||
Sbjct: 4577121 tcgtcgccgcccgggcggccgagg 4577098
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>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0407B12
          Length = 148762

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 163   cctcgacgacctccacgccgacgc 186
             |||||||||||||| |||||||||
Sbjct: 78082 cctcgacgacctccccgccgacgc 78059
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>dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1102E12
          Length = 155692

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 163   cctcgacgacctccacgccgacgc 186
             |||||||||||||| |||||||||
Sbjct: 69052 cctcgacgacctccccgccgacgc 69075
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>emb|BX004839.9| Zebrafish DNA sequence from clone DKEY-18A23 in linkage group 6,
             complete sequence
          Length = 223000

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 330   acgtggagggacaggaggaggagg 353
             ||||||||||| ||||||||||||
Sbjct: 66447 acgtggagggagaggaggaggagg 66424
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>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1288_G09
          Length = 109672

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   ggacaggaggaggaggacga 357
             ||||||||||||||||||||
Sbjct: 44301 ggacaggaggaggaggacga 44282
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>dbj|AK110242.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-G05, full
            insert sequence
          Length = 2733

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  caggaggaggaggacgacga 360
            ||||||||||||||||||||
Sbjct: 1126 caggaggaggaggacgacga 1145
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>dbj|AK103829.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148A06, full
           insert sequence
          Length = 1819

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 cgcccacctcctcgacgacc 173
           ||||||||||||||||||||
Sbjct: 120 cgcccacctcctcgacgacc 139
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>dbj|AK100587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106C19, full
           insert sequence
          Length = 2862

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 341 caggaggaggaggacgacga 360
           ||||||||||||||||||||
Sbjct: 666 caggaggaggaggacgacga 685
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>emb|AJ326831.1|HSA326831 Homo sapiens genomic sequence surrounding NotI site, clone NR1-WP5C
          Length = 658

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 334 ggagggacaggaggaggaggacga 357
           ||||||| ||||||||||||||||
Sbjct: 72  ggagggagaggaggaggaggacga 95
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>dbj|AK071753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110I06, full
           insert sequence
          Length = 1100

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 228 cgccgcccgggcggcggaggccgg 251
           ||||||||| ||||||||||||||
Sbjct: 271 cgccgcccgtgcggcggaggccgg 294
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>dbj|AK070319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050M24, full
           insert sequence
          Length = 1140

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 228 cgccgcccgggcggcggaggccgg 251
           ||||||||| ||||||||||||||
Sbjct: 269 cgccgcccgtgcggcggaggccgg 292
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 231     cgcccgggcggcggaggccggcgc 254
               ||||||||||||| ||||||||||
Sbjct: 1219290 cgcccgggcggcgcaggccggcgc 1219313
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>dbj|AK060638.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D03, full
           insert sequence
          Length = 1464

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 cgcccacctcctcgacgacc 173
           ||||||||||||||||||||
Sbjct: 55  cgcccacctcctcgacgacc 74
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>gb|AF134402.1|AF134402 Drosophila melanogaster Tat-binding protein-1 (Tbp-1) gene,
           complete cds
          Length = 1927

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 acaggaggaggaggacgacg 359
           ||||||||||||||||||||
Sbjct: 682 acaggaggaggaggacgacg 701
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>gb|AE003744.3| Drosophila melanogaster chromosome 3R, section 82 of 118 of the complete
              sequence
          Length = 244356

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    acaggaggaggaggacgacg 359
              ||||||||||||||||||||
Sbjct: 196007 acaggaggaggaggacgacg 196026
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>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     tcctccctctcagccaggtc 103
              ||||||||||||||||||||
Sbjct: 760708 tcctccctctcagccaggtc 760727
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 258     ctttgtcgctgccgccgaagccgg 281
               ||||||| ||||||||||||||||
Sbjct: 3253932 ctttgtccctgccgccgaagccgg 3253955
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   caggaggaggaggacgacga 360
             ||||||||||||||||||||
Sbjct: 80109 caggaggaggaggacgacga 80090
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>ref|NM_170760.2| Mus musculus U2 small nuclear RNA auxiliary factor 1-like 4
           (U2af1l4), mRNA
          Length = 892

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 334 ggagggacaggaggaggagg 353
           ||||||||||||||||||||
Sbjct: 833 ggagggacaggaggaggagg 814
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>gb|AC149609.5| Mus musculus BAC clone RP23-442K4 from 7, complete sequence
          Length = 196912

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   ggagggacaggaggaggagg 353
             ||||||||||||||||||||
Sbjct: 90007 ggagggacaggaggaggagg 89988
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>emb|AJ697969.1| Pseudomonas phage phiEL complete genome
          Length = 211215

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     cggtgactcctccctctcagccag 100
              |||||||||||||| |||||||||
Sbjct: 107137 cggtgactcctcccgctcagccag 107160


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,847,179
Number of Sequences: 3902068
Number of extensions: 3847179
Number of successful extensions: 108685
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106657
Number of HSP's gapped (non-prelim): 2028
length of query: 360
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 338
effective length of database: 17,147,199,772
effective search space: 5795753522936
effective search space used: 5795753522936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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