ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast39f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 151 bits (76), Expect = 2e-33 Identities = 158/186 (84%), Gaps = 12/186 (6%) Strand = Plus / Minus Query: 171 cggatgggcgcgcgcggcggaggccaccgggtgcggggcgtcgctgtcgccgtctatgac 230 ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| Sbjct: 95085 cggatgggcgcgcgcggcggaggtc---gggtgcggggcgtcgctgtcgccgtcgatgac 95029 Query: 231 gcggttcgggatcgccgcgcgcttcaacgccacctcgtcggccgtgtcggaggccgc--- 287 ||||||||||||| ||||| |||||||||||| ||||||||||| ||| ||||||| Sbjct: 95028 gcggttcgggatcaccgcgtgcttcaacgccatgtcgtcggccgtctcgaaggccgccgc 94969 Query: 288 ------cgccgcgtctcgcgccgtccacgcgatgccgcggaccgagcccgtcgtgtccgc 341 ||||||||| ||| |||||||||| |||||| ||| ||||| || |||||||| Sbjct: 94968 caccaacgccgcgtcgagcgtcgtccacgcggtgccgcagactgagcctgttgtgtccgc 94909 Query: 342 cgagtg 347 |||||| Sbjct: 94908 cgagtg 94903
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 234 gttcgggatcgccgcgcgcttcaacgccacctcgtcg 270 |||||||||||| ||||||| |||||||||||||||| Sbjct: 25740104 gttcgggatcgcggcgcgctgcaacgccacctcgtcg 25740068 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 5070460 tcctcctcctcctcctcgccgccgccgccg 5070431 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgcc 147 ||||||| |||||| |||||||||||||| Sbjct: 17422484 tcctcctcctcctcatcgccaccgccgcc 17422512
>dbj|AK120712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001O05, full insert sequence Length = 1450 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 234 gttcgggatcgccgcgcgcttcaacgccacctcgtcg 270 |||||||||||| ||||||| |||||||||||||||| Sbjct: 270 gttcgggatcgcggcgcgctgcaacgccacctcgtcg 306
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 234 gttcgggatcgccgcgcgcttcaacgccacctcgtcg 270 |||||||||||| ||||||| |||||||||||||||| Sbjct: 25668280 gttcgggatcgcggcgcgctgcaacgccacctcgtcg 25668244 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 5070442 tcctcctcctcctcctcgccgccgccgccg 5070413 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgcc 147 ||||||| |||||| |||||||||||||| Sbjct: 17376855 tcctcctcctcctcatcgccaccgccgcc 17376883
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 234 gttcgggatcgccgcgcgcttcaacgccacctcgtcg 270 |||||||||||| ||||||| |||||||||||||||| Sbjct: 107342 gttcgggatcgcggcgcgctgcaacgccacctcgtcg 107306
>gb|BT009568.1| Triticum aestivum clone wre1n.pk0015.d2:fis, full insert mRNA sequence Length = 1165 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 314 tgccgcggaccgagcccgtcgtgtccgccgagtg 347 |||||||||||||||| ||||||||||| ||||| Sbjct: 12 tgccgcggaccgagcctgtcgtgtccgctgagtg 45
>gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0039A07 map near 50283S, complete sequence Length = 158158 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| |||||||||||| ||||||||||| Sbjct: 128625 tcctcctcctcctcctcgccgccgccgccggc 128656
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| |||||||||||| ||||||||||| Sbjct: 14383013 tcctcctcctcctcctcgccgccgccgccggc 14383044 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgcc 144 ||||||| |||||||||||||||||| Sbjct: 7394763 tcctcctcctcctcctcgccaccgcc 7394788 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 ctcctcctcgccaccgccgccggc 150 |||||||| ||||||||||||||| Sbjct: 5961378 ctcctcctggccaccgccgccggc 5961401
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| |||||||||||| ||||||||||| Sbjct: 14465015 tcctcctcctcctcctcgccgccgccgccggc 14465046 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgcc 144 ||||||| |||||||||||||||||| Sbjct: 7464849 tcctcctcctcctcctcgccaccgcc 7464874 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 ctcctcctcgccaccgccgccggc 150 |||||||| ||||||||||||||| Sbjct: 6027855 ctcctcctggccaccgccgccggc 6027878
>gb|DQ184948.1| Malus x domestica putative receptor kinase (DIPM1) mRNA, complete cds Length = 2440 Score = 46.1 bits (23), Expect = 0.075 Identities = 26/27 (96%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccg 145 ||||||| ||||||||||||||||||| Sbjct: 57 tcctcctcctcctcctcgccaccgccg 83
>dbj|AK063774.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C11, full insert sequence Length = 929 Score = 46.1 bits (23), Expect = 0.075 Identities = 29/31 (93%) Strand = Plus / Plus Query: 117 catcctcctactcctcctcgccaccgccgcc 147 ||||||||| |||||||||||| |||||||| Sbjct: 80 catcctcctcctcctcctcgccgccgccgcc 110
>ref|XM_483747.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1176 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 cctcgccaccgccgccggcacg 153 |||||||||||||||||||||| Sbjct: 558 cctcgccaccgccgccggcacg 579
>ref|XM_470602.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3006 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgcc 144 ||||||| |||||||||||||||||| Sbjct: 41 tcctcctcctcctcctcgccaccgcc 66
>ref|NM_191254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 918 Score = 44.1 bits (22), Expect = 0.29 Identities = 34/38 (89%) Strand = Plus / Plus Query: 113 ctctcatcctcctactcctcctcgccaccgccgccggc 150 ||||||||||||| | |||||||||| |||||||||| Sbjct: 275 ctctcatcctcctccacctcctcgccggcgccgccggc 312
>gb|AY022936.1| Oryza sativa microsatellite MRG5261 containing (CTC)X9, closest to marker C563, genomic sequence Length = 227 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgcc 144 ||||||| |||||||||||||||||| Sbjct: 111 tcctcctcctcctcctcgccaccgcc 136
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgcc 144 ||||||| |||||||||||||||||| Sbjct: 76035 tcctcctcctcctcctcgccaccgcc 76010
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgcc 144 ||||||| |||||||||||||||||| Sbjct: 6776535 tcctcctcctcctcctcgccaccgcc 6776510 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 676360 tcctcctcctcctcctcgccgccgccgccg 676389 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| ||||||||| || ||||||||||| Sbjct: 5292131 tcctcctcctcctcctctcccccgccgccggc 5292162
>gb|AC099732.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1203D03, complete sequence Length = 82352 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgcc 144 ||||||| |||||||||||||||||| Sbjct: 48210 tcctcctcctcctcctcgccaccgcc 48235
>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042K08, from chromosome 2, complete sequence Length = 164628 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgcc 144 ||||||| |||||||||||||||||| Sbjct: 44715 tcctcctcctcctcctcgccaccgcc 44690
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 18415835 tcctcctcctcctcctcgccgccgccgccg 18415806 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| |||||||||| | ||||||||||| Sbjct: 21968999 tcctcctcctcctcctcgtcgccgccgccggc 21969030
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 16904091 tcctcctcctcctcctcgccgccgccgccg 16904120 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 120 cctcctactcctcctcgccaccgccgccg 148 |||||| |||||||||||| ||||||||| Sbjct: 14548215 cctcctcctcctcctcgccgccgccgccg 14548187 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 cctctcatcctcctactcctcctcg 136 |||||| |||||||||||||||||| Sbjct: 9970294 cctctcctcctcctactcctcctcg 9970318
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 cctcgccaccgccgccggcacg 153 |||||||||||||||||||||| Sbjct: 27880978 cctcgccaccgccgccggcacg 27880999
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 ggcgcgcgcggcggaggccacc 198 |||||||||||||||||||||| Sbjct: 6618525 ggcgcgcgcggcggaggccacc 6618546 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 5028945 tcctcctcctcctcctcgccgccgccgccg 5028974 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 120 cctcctactcctcctcgccaccgccgccg 148 |||||| |||||||||||| ||||||||| Sbjct: 27443262 cctcctcctcctcctcgccgccgccgccg 27443234 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tgggcgcgcgcggcggaggc 194 |||||||||||||||||||| Sbjct: 30353480 tgggcgcgcgcggcggaggc 30353461 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 28079785 ctcctcctcctcctcgccgccgccgccg 28079758 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| |||||||||| | ||||||||||| Sbjct: 26312666 tcctcctcctcctcctcggcgccgccgccggc 26312697
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgcc 144 ||||||| |||||||||||||||||| Sbjct: 6775748 tcctcctcctcctcctcgccaccgcc 6775723 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 676358 tcctcctcctcctcctcgccgccgccgccg 676387 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| ||||||||| || ||||||||||| Sbjct: 5291346 tcctcctcctcctcctctcccccgccgccggc 5291377
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.29 Identities = 34/38 (89%) Strand = Plus / Minus Query: 113 ctctcatcctcctactcctcctcgccaccgccgccggc 150 ||||||||||||| | |||||||||| |||||||||| Sbjct: 31557335 ctctcatcctcctccacctcctcgccggcgccgccggc 31557298 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgcc 147 ||||||| |||||||||||| |||||||| Sbjct: 147169 tcctcctcctcctcctcgccgccgccgcc 147197 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gccgccgccgcgtctcgcgc 302 |||||||||||||||||||| Sbjct: 28583133 gccgccgccgcgtctcgcgc 28583152 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 23884271 ctcctcctcctcctcgccgccgccgccg 23884244 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 tactcctcctcgccaccgcc 144 |||||||||||||||||||| Sbjct: 13342875 tactcctcctcgccaccgcc 13342894
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 44.1 bits (22), Expect = 0.29 Identities = 34/38 (89%) Strand = Plus / Minus Query: 113 ctctcatcctcctactcctcctcgccaccgccgccggc 150 ||||||||||||| | |||||||||| |||||||||| Sbjct: 70358 ctctcatcctcctccacctcctcgccggcgccgccggc 70321
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 44.1 bits (22), Expect = 0.29 Identities = 34/38 (89%) Strand = Plus / Minus Query: 113 ctctcatcctcctactcctcctcgccaccgccgccggc 150 ||||||||||||| | |||||||||| |||||||||| Sbjct: 151399 ctctcatcctcctccacctcctcgccggcgccgccggc 151362
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 62241 tcctcctcctcctcctcgccgccgccgccg 62270
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 33904 tcctcctcctcctcctcgccgccgccgccg 33933
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 ggcgcgcgcggcggaggccacc 198 |||||||||||||||||||||| Sbjct: 52651 ggcgcgcgcggcggaggccacc 52672
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 101782 tcctcctcctcctcctcgccgccgccgccg 101811
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 ggcgcgcgcggcggaggccacc 198 |||||||||||||||||||||| Sbjct: 134901 ggcgcgcgcggcggaggccacc 134922
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 71059 tcctcctcctcctcctcgccgccgccgccg 71088
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 cctcgccaccgccgccggcacg 153 |||||||||||||||||||||| Sbjct: 89056 cctcgccaccgccgccggcacg 89077
>dbj|AK106324.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E12, full insert sequence Length = 744 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 65 tcctcctcctcctcctcgccgccgccgccg 94
>dbj|AK106042.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E02, full insert sequence Length = 1721 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 199 tcctcctcctcctcctcgccgccgccgccg 228
>dbj|AK103713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137H02, full insert sequence Length = 1289 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 22 tcctcctcctcctcctcgccgccgccgccg 51
>dbj|AK071363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092F04, full insert sequence Length = 2303 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 42 tcctcctcctcctcctcgccgccgccgccg 71
>dbj|AK059479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F03, full insert sequence Length = 1515 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 84 tcctcctcctcctcctcgccgccgccgccg 113
>gb|AY551380.1| Campylopus fragilis isolate C181frECU internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 914 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 114 tctcatcctcctactcctcctcgcca 139 |||||||||||| ||||||||||||| Sbjct: 350 tctcatcctcctcctcctcctcgcca 375
>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15, complete sequence Length = 133413 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 117758 tcctcctcctcctcctcgccgccgccgccg 117729
>emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 112231 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccg 148 ||||||| |||||||||||| ||||||||| Sbjct: 41113 tcctcctcctcctcctcgccgccgccgccg 41084
>ref|XM_549819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 877 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgcc 147 ||||||| |||||||||||| |||||||| Sbjct: 70 tcctcctcctcctcctcgccgccgccgcc 98
>ref|XM_468531.1| Oryza sativa (japonica cultivar-group), mRNA Length = 646 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ctactcctcctcgccaccgccgccg 148 ||||||||||||||| ||||||||| Sbjct: 35 ctactcctcctcgccgccgccgccg 11
>ref|XM_520008.1| PREDICTED: Pan troglodytes plectin 1 (LOC464454), mRNA Length = 15528 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 15439 tcatcctcctactcctcctcg 15459
>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05, complete sequence Length = 109853 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 127 ctcctcctcgccaccgccgccggca 151 |||||||||||| |||||||||||| Sbjct: 25751 ctcctcctcgccgccgccgccggca 25775
>ref|XM_369710.1| Magnaporthe grisea 70-15 hypothetical protein (MG06225.4) partial mRNA Length = 462 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 ctcctcctcgccaccgccgcc 147 ||||||||||||||||||||| Sbjct: 25 ctcctcctcgccaccgccgcc 45
>ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial mRNA Length = 3549 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gccgccgccgcgtctcgcgcc 303 ||||||||||||||||||||| Sbjct: 2804 gccgccgccgcgtctcgcgcc 2824
>ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial mRNA Length = 3549 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gccgccgccgcgtctcgcgcc 303 ||||||||||||||||||||| Sbjct: 2804 gccgccgccgcgtctcgcgcc 2824
>gb|BC013206.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa, mRNA (cDNA clone IMAGE:4155706) Length = 2078 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 950 tcatcctcctactcctcctcg 970
>gb|AY480051.1| Homo sapiens plectin 11 mRNA, complete cds Length = 14797 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13684 tcatcctcctactcctcctcg 13704
>gb|AY480050.1| Homo sapiens plectin 10 mRNA, complete cds Length = 14689 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13576 tcatcctcctactcctcctcg 13596
>gb|AY480049.1| Homo sapiens plectin 8 mRNA, complete cds Length = 14675 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13562 tcatcctcctactcctcctcg 13582
>gb|AY480048.1| Homo sapiens plectin 7 mRNA, complete cds Length = 14646 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13533 tcatcctcctactcctcctcg 13553
>gb|AY480047.1| Homo sapiens plectin 6 mRNA, complete cds Length = 15249 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 14136 tcatcctcctactcctcctcg 14156
>gb|AY480046.1| Homo sapiens plectin 3 mRNA, complete cds Length = 14751 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13638 tcatcctcctactcctcctcg 13658
>gb|AY480045.1| Homo sapiens plectin 2 mRNA, complete cds Length = 14626 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13513 tcatcctcctactcctcctcg 13533
>gb|AY480044.1| Homo sapiens plectin 1 mRNA, complete cds Length = 14755 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13642 tcatcctcctactcctcctcg 13662
>ref|NM_000445.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 1, mRNA Length = 14755 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13642 tcatcctcctactcctcctcg 13662
>ref|NM_201378.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 2, mRNA Length = 14626 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13513 tcatcctcctactcctcctcg 13533
>ref|NM_201379.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 3, mRNA Length = 14751 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13638 tcatcctcctactcctcctcg 13658
>ref|NM_201380.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 6, mRNA Length = 15249 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 14136 tcatcctcctactcctcctcg 14156
>ref|NM_201381.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 7, mRNA Length = 14646 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13533 tcatcctcctactcctcctcg 13553
>ref|NM_201383.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 10, mRNA Length = 14689 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13576 tcatcctcctactcctcctcg 13596
>ref|NM_201382.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 8, mRNA Length = 14675 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13562 tcatcctcctactcctcctcg 13582
>ref|NM_201384.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 11, mRNA Length = 14797 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13684 tcatcctcctactcctcctcg 13704
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 cgccaccgccgccggcacgct 155 ||||||||||||||||||||| Sbjct: 214641 cgccaccgccgccggcacgct 214661
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ctcgccaccgccgccggcacg 153 ||||||||||||||||||||| Sbjct: 248866 ctcgccaccgccgccggcacg 248886 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 acgccacctcgtcggccgtg 276 |||||||||||||||||||| Sbjct: 288306 acgccacctcgtcggccgtg 288325
>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence Length = 215342 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 155629 tcatcctcctactcctcctcg 155649
>emb|Z54367.1|HSPLECTIN H.sapiens gene for plectin Length = 14189 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13966 tcatcctcctactcctcctcg 13986
>gb|AC091805.16| Homo sapiens 12p BAC RP11-841C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177115 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgcc 147 ||||||| ||||||||| ||||||||||| Sbjct: 107852 tcctcctcctcctcctccccaccgccgcc 107880
>gb|U53204.1|HSU53204 Human plectin (PLEC1) mRNA, complete cds Length = 14800 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 13687 tcatcctcctactcctcctcg 13707
>gb|U63610.1|HSPLEC1S3 Human plectin (PLEC1) gene, exons 3-32, and complete cds Length = 22693 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 21521 tcatcctcctactcctcctcg 21541
>gb|BC007597.1|BC007597 Homo sapiens, Similar to plectin 1, intermediate filament binding protein, 500kD, clone IMAGE:3346810, mRNA, partial cds Length = 4133 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcg 136 ||||||||||||||||||||| Sbjct: 3001 tcatcctcctactcctcctcg 3021
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 127 ctcctcctcgccaccgccgccggca 151 |||||||||||| |||||||||||| Sbjct: 15912062 ctcctcctcgccgccgccgccggca 15912086 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| ||||||||| || ||||||||||| Sbjct: 25066508 tcctcctcctcctcctccccgccgccgccggc 25066477 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 16846588 ctcctcctcctcctcgccgccgccgccg 16846615
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 ctactcctcctcgccaccgccgccg 148 ||||||||||||||| ||||||||| Sbjct: 35699899 ctactcctcctcgccgccgccgccg 35699923 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 3170763 ctcctcctcctcctcgccgccgccgccg 3170736
>ref|XM_345446.2| PREDICTED: Rattus norvegicus NK2 transcription factor related, locus 2 (Drosophila) (predicted) (Nkx2-2_predicted), mRNA Length = 2055 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 tcctcctcgccaccgccgccg 148 ||||||||||||||||||||| Sbjct: 1232 tcctcctcgccaccgccgccg 1212
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence Length = 215241 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 gcgcggcggaggccaccgggtgcgg 206 ||||||||||||||||| ||||||| Sbjct: 185834 gcgcggcggaggccacctggtgcgg 185858
>emb|AL606494.4| Mouse DNA sequence from clone RP23-198B6 on chromosome 2, complete sequence Length = 196744 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 tcctctcatcctcctactcctcctc 135 ||||||||||||||| ||||||||| Sbjct: 45549 tcctctcatcctcctcctcctcctc 45573
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 120 cctcctactcctcctcgccaccgccgccg 148 |||||| |||||||||||| ||||||||| Sbjct: 46504 cctcctcctcctcctcgccgccgccgccg 46476
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 120 cctcctactcctcctcgccaccgccgccg 148 |||||| |||||||||||| ||||||||| Sbjct: 12820 cctcctcctcctcctcgccgccgccgccg 12792
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 120 cctcctactcctcctcgccaccgccgccg 148 |||||| |||||||||||| ||||||||| Sbjct: 62331 cctcctcctcctcctcgccgccgccgccg 62303
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgcc 147 ||||||| |||||||||||| |||||||| Sbjct: 144971 tcctcctcctcctcctcgccgccgccgcc 144999
>dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017I18 Length = 146304 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 cctctcatcctcctactcctcctcg 136 |||||| |||||||||||||||||| Sbjct: 125741 cctctcctcctcctactcctcctcg 125765
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 ctactcctcctcgccaccgccgccg 148 ||||||||||||||| ||||||||| Sbjct: 60513 ctactcctcctcgccgccgccgccg 60537
>dbj|AK120917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034L01, full insert sequence Length = 646 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ctactcctcctcgccaccgccgccg 148 ||||||||||||||| ||||||||| Sbjct: 35 ctactcctcctcgccgccgccgccg 11
>dbj|AK111663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156F08, full insert sequence Length = 2751 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 120 cctcctactcctcctcgccaccgccgccg 148 |||||| |||||||||||| ||||||||| Sbjct: 2377 cctcctcctcctcctcgccgccgccgccg 2349
>emb|AJ427982.1|OSA427982 Oryza sativa partial HAK13 gene for putative potasium transporter Length = 5989 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 120 cctcctactcctcctcgccaccgccgccg 148 |||||| |||||||||||| ||||||||| Sbjct: 5888 cctcctcctcctcctcgccgccgccgccg 5860
>dbj|AK102779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107J24, full insert sequence Length = 2955 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 ctcatcctcctactcctcctc 135 ||||||||||||||||||||| Sbjct: 322 ctcatcctcctactcctcctc 302
>dbj|AK099360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F10, full insert sequence Length = 891 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgcc 147 ||||||| |||||||||||| |||||||| Sbjct: 69 tcctcctcctcctcctcgccgccgccgcc 97
>dbj|AK099081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002L13, full insert sequence Length = 877 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgcc 147 ||||||| |||||||||||| |||||||| Sbjct: 69 tcctcctcctcctcctcgccgccgccgcc 97
>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129619 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgcc 147 ||||||| |||||| |||||||||||||| Sbjct: 109922 tcctcctcctcctcatcgccaccgccgcc 109894
>emb|CT009609.1| Desulfococcus multivorans vrl island Length = 89210 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 atgacgcggttcgggatcgcc 246 ||||||||||||||||||||| Sbjct: 405 atgacgcggttcgggatcgcc 425
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgcc 147 ||||||| |||||||||||| |||||||| Sbjct: 95715 tcctcctcctcctcctcgccgccgccgcc 95743
>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0402A09 Length = 141966 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgcc 147 ||||||| |||||||||||| |||||||| Sbjct: 132099 tcctcctcctcctcctcgccgccgccgcc 132127
>gb|AC158391.2| Mus musculus BAC clone RP23-441C8 from chromosome 17, complete sequence Length = 203548 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 tcctctcatcctcctactcctcct 134 ||||||| |||||||||||||||| Sbjct: 77806 tcctctcctcctcctactcctcct 77783
>ref|XM_475683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 714 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| ||||||||| || ||||||||||| Sbjct: 512 tcctcctcctcctcctccccgccgccgccggc 481
>ref|NM_196543.1| Oryza sativa (japonica cultivar-group) putative CCR4-associated factor (OSJNBa0053G13.17), mRNA Length = 2955 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 atcctcctactcctcctcgccaccgccg 145 |||||||| |||||||||||| |||||| Sbjct: 1821 atcctcctcctcctcctcgccgccgccg 1848
>ref|NM_196533.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053G13.7), mRNA Length = 1944 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 atcctcctactcctcctcgccaccgccg 145 |||||||| |||||||||||| |||||| Sbjct: 714 atcctcctcctcctcctcgccgccgccg 741
>ref|NM_192692.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 28 ctcctcctcctcctcgccgccgccgccg 55
>gb|BT017081.1| Zea mays clone EL01N0360D03.c mRNA sequence Length = 1426 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 234 gttcgggatcgccgcgcgcttcaacgccacctcgtc 269 |||||||||||| ||||| | ||||||||| ||||| Sbjct: 288 gttcgggatcgcggcgcggtgcaacgccacgtcgtc 323
>ref|XM_478215.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1361 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 37 ctcctcctcctcctcgccgccgccgccg 64
>ref|XM_472619.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1008 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| |||||||||| | ||||||||||| Sbjct: 350 tcctcctcctcctcctcgtcgccgccgccggc 319
>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06, complete sequence Length = 143130 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 59084 ctcctcctcctcctcgccgccgccgccg 59111
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 catcctcctactcctcctcgccac 140 ||||||||| |||||||||||||| Sbjct: 966884 catcctcctcctcctcctcgccac 966907
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 ggccgccgccgcgtctcgcgccgt 305 ||||||||||||||| |||||||| Sbjct: 537526 ggccgccgccgcgtcacgcgccgt 537549
>ref|XM_359936.1| Magnaporthe grisea 70-15 hypothetical protein (MG04841.4) partial mRNA Length = 726 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tcctcctcgccaccgccgcc 147 |||||||||||||||||||| Sbjct: 20 tcctcctcgccaccgccgcc 39
>gb|BC074310.1| Xenopus laevis cDNA clone MGC:84120 IMAGE:6950380, complete cds Length = 1520 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tcatcctcctactcctcctcgcca 139 |||||||||| ||||||||||||| Sbjct: 436 tcatcctcctcctcctcctcgcca 413
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17, complete sequence Length = 139829 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| ||||||||| || ||||||||||| Sbjct: 135361 tcctcctcctcctcctccccgccgccgccggc 135330
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| ||||||||| || ||||||||||| Sbjct: 9163 tcctcctcctcctcctccccgccgccgccggc 9132
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 ggccgccgccgcgtctcgcgccgt 305 ||||||||||||||| |||||||| Sbjct: 3237543 ggccgccgccgcgtcacgcgccgt 3237520
>gb|AC120411.9| Mus musculus chromosome 6, clone RP24-447O2, complete sequence Length = 202938 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcgcca 139 |||||||||| ||||||||||||| Sbjct: 152529 tcatcctcctcctcctcctcgcca 152552
>ref|XM_974534.1| PREDICTED: Mus musculus expressed sequence AI448196 (AI448196), mRNA Length = 6306 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tcatcctcctactcctcctcgcca 139 |||||||||| ||||||||||||| Sbjct: 5012 tcatcctcctcctcctcctcgcca 4989
>ref|XM_905633.2| PREDICTED: Mus musculus expressed sequence AI448196 (AI448196), mRNA Length = 6618 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 tcatcctcctactcctcctcgcca 139 |||||||||| ||||||||||||| Sbjct: 5012 tcatcctcctcctcctcctcgcca 4989
>gb|AF444123.2| Campylopus perpusillus internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 1961 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcgcca 139 |||||||||| ||||||||||||| Sbjct: 460 tcatcctcctcctcctcctcgcca 483
>ref|XM_381379.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01203.1) partial mRNA Length = 1122 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ctcctcctcgccaccgccgc 146 |||||||||||||||||||| Sbjct: 712 ctcctcctcgccaccgccgc 731
>ref|XM_570906.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNE03400) partial mRNA Length = 1443 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 catcctcctactcctcctcgccac 140 ||||||||| |||||||||||||| Sbjct: 426 catcctcctcctcctcctcgccac 449
>ref|XM_803600.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503599.40) partial mRNA Length = 2991 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 ctcatcctcctactcctcctcgcc 138 ||||||||||| |||||||||||| Sbjct: 480 ctcatcctcctcctcctcctcgcc 457
>ref|XM_811253.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506743.140) partial mRNA Length = 2607 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 112 cctctcatcctcctactcctcctcgcca 139 |||||| ||||||| ||||||||||||| Sbjct: 471 cctctcctcctcctcctcctcctcgcca 444
>emb|CR847928.12| Zebrafish DNA sequence from clone DKEYP-67E7 in linkage group 1, complete sequence Length = 160252 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ctcatcctcctactcctcct 134 |||||||||||||||||||| Sbjct: 77088 ctcatcctcctactcctcct 77107
>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence Length = 141653 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcgcca 139 |||||||||| ||||||||||||| Sbjct: 36965 tcatcctcctcctcctcctcgcca 36988
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| ||||||||| || ||||||||||| Sbjct: 115533 tcctcctcctcctcctctcccccgccgccggc 115564
>ref|XM_504412.1| Yarrowia lipolytica CLIB122, YALI0E26125g predicted mRNA Length = 699 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tcctcctcgccaccgccgcc 147 |||||||||||||||||||| Sbjct: 17 tcctcctcgccaccgccgcc 36
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 ctcctcctcgccaccgccgccggc 150 |||||||| ||||||||||||||| Sbjct: 17461 ctcctcctggccaccgccgccggc 17484
>gb|AC108449.5| Homo sapiens chromosome 8, clone CTD-2647L4, complete sequence Length = 160380 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ttcctctcatcctcctactc 129 |||||||||||||||||||| Sbjct: 155722 ttcctctcatcctcctactc 155741
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete sequence Length = 121130 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| |||||||||| | ||||||||||| Sbjct: 34921 tcctcctcctcctcctcgtcgccgccgccggc 34952
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 ggccgccgccgcgtctcgcgccgt 305 ||||||||||||||| |||||||| Sbjct: 2967408 ggccgccgccgcgtcacgcgccgt 2967385
>gb|AC103830.2| Homo sapiens chromosome 8, clone CTD-2563K22, complete sequence Length = 191525 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ttcctctcatcctcctactc 129 |||||||||||||||||||| Sbjct: 83612 ttcctctcatcctcctactc 83593
>ref|NM_008740.2| Mus musculus N-ethylmaleimide sensitive fusion protein (Nsf), mRNA Length = 3787 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgggcgcgcgcggcggaggc 194 |||||||||||||||||||| Sbjct: 9 tgggcgcgcgcggcggaggc 28
>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0011L09, complete sequence Length = 121055 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgc 146 ||||||| |||||||||||| ||||||| Sbjct: 36084 tcctcctcctcctcctcgccgccgccgc 36057
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgc 146 ||||||| |||||||||||| ||||||| Sbjct: 23917 tcctcctcctcctcctcgccgccgccgc 23944
>dbj|AB169469.1| Macaca fascicularis testis cDNA, clone: QtsA-21272, similar to human ATP synthase, H+ transporting, mitochondrial F0 complex,subunit s (factor B) (ATP5S), mRNA, RefSeq: NM_015684.1 Length = 815 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 atgggcgcgcgcggcggagg 193 |||||||||||||||||||| Sbjct: 2 atgggcgcgcgcggcggagg 21
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 atcctcctactcctcctcgccaccgccg 145 |||||||| |||||||||||| |||||| Sbjct: 14362449 atcctcctcctcctcctcgccgccgccg 14362476 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 atcctcctactcctcctcgccaccgccg 145 |||||||| |||||||||||| |||||| Sbjct: 14289752 atcctcctcctcctcctcgccgccgccg 14289725 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgc 146 ||||||| |||||||||||| ||||||| Sbjct: 12739645 tcctcctcctcctcctcgccgccgccgc 12739618
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 18564748 ctcctcctcctcctcgccgccgccgccg 18564775
>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20, complete sequence Length = 99855 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| |||||||||| | ||||||||||| Sbjct: 41570 tcctcctcctcctcctcgtcgccgccgccggc 41601
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 atcctcctactcctcctcgccaccgccg 145 |||||||| |||||||||||| |||||| Sbjct: 109724 atcctcctcctcctcctcgccgccgccg 109751 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 atcctcctactcctcctcgccaccgccg 145 |||||||| |||||||||||| |||||| Sbjct: 37027 atcctcctcctcctcctcgccgccgccg 37000
>gb|AE004749.1| Pseudomonas aeruginosa PAO1, section 310 of 529 of the complete genome Length = 16841 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgccaccgccgccggcacgc 154 |||||||||||||||||||| Sbjct: 5788 cgccaccgccgccggcacgc 5807
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 ctcctcctcgccaccgccgccggc 150 |||||||||||| ||||||||||| Sbjct: 3767050 ctcctcctcgcccccgccgccggc 3767073
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C09 Length = 170226 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gccgccgccgcgtctcgcgc 302 |||||||||||||||||||| Sbjct: 109572 gccgccgccgcgtctcgcgc 109591
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 17290 ctcctcctcctcctcgccgccgccgccg 17317
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 124604 ctcctcctcctcctcgccgccgccgccg 124577
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 268 tcggccgtgtcggaggccg-ccgccgcg 294 ||||||||||||||||||| |||||||| Sbjct: 4708068 tcggccgtgtcggaggccgtccgccgcg 4708095
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tgggcgcgcgcggcggaggc 194 |||||||||||||||||||| Sbjct: 100075 tgggcgcgcgcggcggaggc 100056
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 30675 ctcctcctcctcctcgccgccgccgccg 30648
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 tactcctcctcgccaccgcc 144 |||||||||||||||||||| Sbjct: 83233 tactcctcctcgccaccgcc 83252
>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0009H10 Length = 175754 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 10691 ctcctcctcctcctcgccgccgccgccg 10664
>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085J13 Length = 130185 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| |||||||||| | ||||||||||| Sbjct: 10393 tcctcctcctcctcctcggcgccgccgccggc 10424
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 98917 ctcctcctcctcctcgccgccgccgccg 98890
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 42950 ctcctcctcctcctcgccgccgccgccg 42923
>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1457_D07 Length = 103688 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 93504 ctcctcctcctcctcgccgccgccgccg 93531
>dbj|AB073701.1| Borrelia duttonii plasmid DNA, complete sequence, strain:Ly Length = 44010 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ttcctctcatcctcctactcctcc 133 |||||||| ||||||||||||||| Sbjct: 1502 ttcctctcctcctcctactcctcc 1525
>dbj|AK073124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033008E09, full insert sequence Length = 1873 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 53 ctcctcctcctcctcgccgccgccgccg 80
>dbj|AK067825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119A09, full insert sequence Length = 1230 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| ||||||||| || ||||||||||| Sbjct: 119 tcctcctcctcctcctctcccccgccgccggc 88
>dbj|AK065564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013032C08, full insert sequence Length = 1749 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgccggc 150 ||||||| ||||||||| || ||||||||||| Sbjct: 121 tcctcctcctcctcctctcccccgccgccggc 90
>gb|BC006627.1| Mus musculus N-ethylmaleimide sensitive fusion protein, mRNA (cDNA clone MGC:11511 IMAGE:3968733), complete cds Length = 3787 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgggcgcgcgcggcggaggc 194 |||||||||||||||||||| Sbjct: 9 tgggcgcgcgcggcggaggc 28
>dbj|AK064816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E13, full insert sequence Length = 3224 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 48 ctcctcctcctcctcgccgccgccgccg 75
>dbj|AK064601.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-H06, full insert sequence Length = 733 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 ctcatcctcctactcctcctcgccaccg 142 ||||||||||| ||||||||||| |||| Sbjct: 93 ctcatcctcctcctcctcctcgcgaccg 66
>dbj|AK064235.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H11, full insert sequence Length = 1361 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 37 ctcctcctcctcctcgccgccgccgccg 64
>dbj|AK060514.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F05, full insert sequence Length = 1500 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ctcctactcctcctcgccaccgccgccg 148 ||||| |||||||||||| ||||||||| Sbjct: 131 ctcctcctcctcctcgccgccgccgccg 104
>gb|AY551419.1| Campylopus fragilis isolate C189frKI internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 871 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 tcatcctcctactcctcctcgcca 139 |||||||||| ||||||||||||| Sbjct: 314 tcatcctcctcctcctcctcgcca 337
>gb|AY105714.1| Zea mays PCO128327 mRNA sequence Length = 1362 Score = 40.1 bits (20), Expect = 4.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 234 gttcgggatcgccgcgcgcttcaacgccacctcgtc 269 |||||||||||| ||||| | ||||||||| ||||| Sbjct: 160 gttcgggatcgcggcgcggtgcaacgccacgtcgtc 195
>gb|AC119998.13| Mus musculus chromosome 17, clone RP24-128A6, complete sequence Length = 172124 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 tcctctcatcctcctactcctcct 134 ||||||| |||||||||||||||| Sbjct: 531 tcctctcctcctcctactcctcct 554
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 atcctcctactcctcctcgccaccgccg 145 |||||||| |||||||||||| |||||| Sbjct: 14370691 atcctcctcctcctcctcgccgccgccg 14370718 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 atcctcctactcctcctcgccaccgccg 145 |||||||| |||||||||||| |||||| Sbjct: 14297994 atcctcctcctcctcctcgccgccgccg 14297967 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 119 tcctcctactcctcctcgccaccgccgc 146 ||||||| |||||||||||| ||||||| Sbjct: 12746985 tcctcctcctcctcctcgccgccgccgc 12746958
>gb|AC133499.3| Mus musculus BAC clone RP24-248F14 from 8, complete sequence Length = 181064 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 cgccaccgccgccggcacgctccc 158 |||||||||||||||| ||||||| Sbjct: 6222 cgccaccgccgccggcgcgctccc 6245
>gb|AC133195.4| Mus musculus BAC clone RP23-133F6 from 8, complete sequence Length = 214318 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 cgccaccgccgccggcacgctccc 158 |||||||||||||||| ||||||| Sbjct: 167805 cgccaccgccgccggcgcgctccc 167828
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tcctcctcgccaccgccgcc 147 |||||||||||||||||||| Sbjct: 3103999 tcctcctcgccaccgccgcc 3104018
>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence Length = 224370 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 tcctctcatcctcctactcctcct 134 ||||||| |||||||||||||||| Sbjct: 31717 tcctctcctcctcctactcctcct 31694 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,898,514 Number of Sequences: 3902068 Number of extensions: 1898514 Number of successful extensions: 68073 Number of sequences better than 10.0: 167 Number of HSP's better than 10.0 without gapping: 185 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 63346 Number of HSP's gapped (non-prelim): 4727 length of query: 347 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 325 effective length of database: 17,147,199,772 effective search space: 5572839925900 effective search space used: 5572839925900 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
