ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast39e12 |
|---|---|
| Clone Library Name | barley_pub |
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 39.3 bits (90), Expect = 0.003 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 18/81 (22%) Frame = -3 Query: 306 PYPPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL------ 148 P PP + A+G PG P KNG+ G P+ + + G+ GP +RG Sbjct: 415 PGPPGTSGNPGAKGTPGEPGKNGAKGDPGPKGERGENGTPGARGPPGEEGKRGANGEPGQ 474 Query: 147 -----------LPGFRGTDGS 118 PGFRG GS Sbjct: 475 NGVPGTPGERGSPGFRGLPGS 495 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/57 (33%), Positives = 22/57 (38%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 R P PG KNG +G P P G GP + +G LPG G G Sbjct: 595 RGPGGPPGTPGPAGKNGDVGLPGPPGPAGPAGDRGEPGPSGSPGLQG-LPGGPGPAG 650 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIPTRARRG 94 PG+P +G G P Q +P +G GP R + G++ PG +G +G+ RG Sbjct: 541 PGSPGSDGKPG--PPGNQGEP-GRSGPPGPAGPRGQPGVMGFPGPKGNEGAPGKNGERG 596 Score = 28.9 bits (63), Expect = 3.4 Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 2/75 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAE--GPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPG 139 P P P E P GPG K+G+ G P P AG G + G PG Sbjct: 298 PGPGGPTGERGRPGNPGGPGAHGKDGAPGTAGPLGPPGPPGTAGFPGSPGFKGEAG-PPG 356 Query: 138 FRGTDGSIPTRARRG 94 G G+ R G Sbjct: 357 PAGASGNPGERGEPG 371 Score = 27.7 bits (60), Expect = 7.6 Identities = 25/96 (26%), Positives = 33/96 (34%), Gaps = 28/96 (29%) Frame = -3 Query: 297 PHRESSSPAE--------GPGNPA---KNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 P E+ P E GPG P +NG G P+ P A G GP + +G Sbjct: 648 PAGENGKPGEPGPKGDIGGPGFPGPKGENGIPGERGPQGPPGPTGARGGPGPAGSEGAKG 707 Query: 150 L-----------------LPGFRGTDGSIPTRARRG 94 +PG RG GS + +G Sbjct: 708 PPGPPGAPGGTGLPGLQGMPGERGASGSPGPKGDKG 743 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG--LLPGFRGTDG 121 G P NG G P + G +GP R + G LPG RG G Sbjct: 491 GLPGSNGLPGEKGPAGERGSPGPPGPSGPAGDRGQDGGPGLPGMRGLPG 539
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 37.4 bits (85), Expect = 0.010 Identities = 25/71 (35%), Positives = 28/71 (39%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTD 124 YP + S A PG G G+ R + P AG TGP R G G RG Sbjct: 941 YPGNTGPSGLAGAPGPAGSAGPAGKSGNRGEGGPSGPAGITGPSGPRGPAG-PQGVRGDK 999 Query: 123 GSIPTRARRGL 91 G R RGL Sbjct: 1000 GEAGERGARGL 1010 Score = 31.2 bits (69), Expect = 0.69 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGR---DQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGT 127 R S P PG ++G +G P + P G+ GP RG+ LPG RG Sbjct: 813 RGDSGPVGRPGEQGQHGPVGLAGDKGPSGEAGPAGPPGAAGPSGVLGARGILGLPGTRGE 872 Query: 126 DG 121 G Sbjct: 873 RG 874 Score = 30.8 bits (68), Expect = 0.89 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG+ + G G + P+ AGS+GP RG +PG RG G Sbjct: 354 PGSVGQQGPAGPSGEEGKRGPNGEAGSSGPSGNAGIRG-VPGTRGLPG 400 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 10/74 (13%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG--------PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTR 157 P P+ ++ P E PG NG G++ P +G+ GP AR Sbjct: 420 PGARGPNGDAGRPGEPGLLGARGLPGFSGSNGPQGKEGPAGPQGIEGRSGAAGPAGARGE 479 Query: 156 RGLL--PGFRGTDG 121 G + PG +G +G Sbjct: 480 PGAIGFPGPKGPNG 493 Score = 30.0 bits (66), Expect = 1.5 Identities = 26/101 (25%), Positives = 32/101 (31%), Gaps = 28/101 (27%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG--------PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTR 157 P P P E P E PG+ G G PH +GS GP A Sbjct: 549 PGPGGPPGEVGKPGERGAPGDFGPPGSAGTRGERGAPGESGGAGPHGPSGSRGPSGAPGP 608 Query: 156 RGL--------------------LPGFRGTDGSIPTRARRG 94 G +PG RGT G+ T+ +G Sbjct: 609 DGQKGEPGAAGLNGGLGPSGPAGIPGERGTAGTPGTKGEKG 649 Score = 28.1 bits (61), Expect = 5.8 Identities = 26/77 (33%), Positives = 27/77 (35%), Gaps = 4/77 (5%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGP----GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL 145 P P R + PA GP G P G G R P AGS GP A G Sbjct: 698 PRGAPGERGEAGPA-GPTGFAGPPGAAGHTGAKGDRGAKGPKGEAGSPGPLGAHGSAG-P 755 Query: 144 PGFRGTDGSIPTRARRG 94 G G GS R G Sbjct: 756 AGPNGPAGSTGARGDAG 772
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 37.0 bits (84), Expect = 0.012 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRG 130 YP + PG P NG G + P G TGPR +R RG PG +G Sbjct: 845 YPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKG 904 Query: 129 TDG 121 T G Sbjct: 905 TSG 907 Score = 30.4 bits (67), Expect = 1.2 Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 2/76 (2%) Frame = -3 Query: 315 NPSPYPPHRESSSPAE-GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 NP P + P E GP G G G D Q P +G GP +RG P Sbjct: 1307 NPGPVGFPGDPGPPGELGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRG-PP 1365 Query: 141 GFRGTDGSIPTRARRG 94 G G +G + +G Sbjct: 1366 GAAGAEGRQGEKGAKG 1381 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/51 (37%), Positives = 22/51 (43%) Frame = -3 Query: 273 AEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 AEGP P K G +G P + P G GP + LPG G DG Sbjct: 1385 AEGP--PGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQG----LPGAAGQDG 1429 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIPTRA 103 PA G+P ++G G Q G GP +G + PG G DG R Sbjct: 1115 PAGPAGSPGEDGDKGEIGEPGQKGSKGGKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRG 1174 Query: 102 RRGLW 88 ++G++ Sbjct: 1175 QQGMF 1179 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/48 (31%), Positives = 20/48 (41%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG+P K G G P G GPR + G + G +G+ G Sbjct: 732 PGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADG-VRGLKGSKG 778 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSAR---TRRGLLPGFRGTDG 121 P PG G+ G++ + P +G GP R RG LPG +G G Sbjct: 989 PPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERG-LPGAQGAPG 1042
>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 911 Score = 37.0 bits (84), Expect = 0.012 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRG 130 YP + PG P NG G + P G TGPR +R RG PG +G Sbjct: 612 YPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKG 671 Query: 129 TDG 121 T G Sbjct: 672 TSG 674 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSAR---TRRGLLPGFRGTDG 121 R P PG G+ G++ + P +G GP R RG LPG +G G Sbjct: 751 RGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGVSGKDGPAGLRGFPGERG-LPGAQGAPG 809 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/48 (31%), Positives = 20/48 (41%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG+P K G G P G GPR + G + G +G+ G Sbjct: 499 PGHPGKEGQSGEKGSLGPPGPQGPIGYPGPRGVKGADG-VRGLKGSKG 545
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 37.0 bits (84), Expect = 0.012 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 15/85 (17%) Frame = -3 Query: 300 PPHRESSSPAEG----PGNPAKNGSLGRDQPRAQTKPHAAAGS---------TGPRSART 160 PP R+ + +G PGNP +G+LG P Q P G+ GP A Sbjct: 933 PPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGDPGPVGPVGPAGAFG 992 Query: 159 RRGLL--PGFRGTDGSIPTRARRGL 91 RGL G RG G + RGL Sbjct: 993 PRGLAGPQGPRGEKGEPGDKGHRGL 1017 Score = 32.3 bits (72), Expect = 0.31 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 8/60 (13%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--------PGFRGTDG 121 P PG P + G++G PR P G+ GP +G PGF+G G Sbjct: 498 PTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGAKGETGPAGPPGFQGLPG 557 Score = 27.7 bits (60), Expect = 7.6 Identities = 22/62 (35%), Positives = 24/62 (38%) Frame = -3 Query: 285 SSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTR 106 SS P PGNP NG G A G GPR +PG G G P+ Sbjct: 288 SSGPVGPPGNPGANGLPGAKGAAGLPGVAGAPGLPGPRG-------IPGPPGPAG--PSG 338 Query: 105 AR 100 AR Sbjct: 339 AR 340 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/48 (35%), Positives = 18/48 (37%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG P + G G PR P AG G R PG RG G Sbjct: 116 PGEPGEPGQTGPQGPRGPPGPPGKAGEDGHPGKPGR----PGERGVAG 159
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 36.6 bits (83), Expect = 0.016 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = -3 Query: 309 SPYPPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PG 139 SP PP +G PG P G+LG PR + G+ GP + +G PG Sbjct: 1359 SPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKGEPG 1418 Query: 138 FRGTDGSIPTRARRG 94 G+DG + +RG Sbjct: 1419 PAGSDGLPGLKGKRG 1433 Score = 36.6 bits (83), Expect = 0.016 Identities = 24/73 (32%), Positives = 30/73 (41%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P P P H + P PG+P G G+ P G GP R G LPGF Sbjct: 1088 PGP-PGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPG-LPGFP 1145 Query: 132 GTDGSIPTRARRG 94 G+ G + R +G Sbjct: 1146 GSPGPMGIRGDQG 1158 Score = 30.8 bits (68), Expect = 0.89 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -3 Query: 300 PPHRESSSPAE-GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFR 133 P + E + P GP G+P G +G+ Q P G GP A G LPG Sbjct: 1056 PGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKP 1115 Query: 132 GTDGSIPTRARRGL 91 G G + + +GL Sbjct: 1116 GPHGDLGFKGIKGL 1129 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/57 (33%), Positives = 23/57 (40%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRG 94 PG P G G P P GSTG RG +PG G G ++ +RG Sbjct: 975 PGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRG-IPGSMGNMGMPGSKGKRG 1030 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 4/61 (6%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGP--RSARTRRGL--LPGFRGTDGSIPTRARR 97 PG P G+ G D PR G GP R RG LPG G G R + Sbjct: 776 PGLPGTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKT 835 Query: 96 G 94 G Sbjct: 836 G 836
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 36.6 bits (83), Expect = 0.016 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRG 130 YP + PG P NG G + P G TGPR +R RG PG +G Sbjct: 843 YPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKG 902 Query: 129 TDG 121 T G Sbjct: 903 TSG 905 Score = 30.8 bits (68), Expect = 0.89 Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 2/76 (2%) Frame = -3 Query: 315 NPSPYPPHRESSSPAE-GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 NP P + P E GP G G G D Q P +G GP +RG P Sbjct: 1305 NPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRG-PP 1363 Query: 141 GFRGTDGSIPTRARRG 94 G G++G + +G Sbjct: 1364 GASGSEGRQGEKGAKG 1379 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/51 (37%), Positives = 22/51 (43%) Frame = -3 Query: 273 AEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 AEGP P K G +G P + P G GP + LPG G DG Sbjct: 1383 AEGP--PGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQG----LPGAAGQDG 1427 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/65 (26%), Positives = 25/65 (38%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRA 103 + PA PG G +G + G GP + G PG G DG R Sbjct: 1114 AGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVG-APGIAGGDGEPGPRG 1172 Query: 102 RRGLW 88 ++G++ Sbjct: 1173 QQGMF 1177 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/48 (31%), Positives = 20/48 (41%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG+P K G G P G GPR + G + G +G+ G Sbjct: 730 PGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADG-VRGLKGSKG 776 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSAR---TRRGLLPGFRGTDG 121 R P PG G+ G++ + P +G GP R RG LPG +G G Sbjct: 982 RGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGIRGFPGERG-LPGAQGAPG 1040
>C1QC_RAT (P31722) Complement C1q subcomponent subunit C precursor| Length = 245 Score = 36.2 bits (82), Expect = 0.021 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRG 94 PG P K+G G P+ + A G+ GP+ + G +PG RG +G + T G Sbjct: 42 PGTPGKDGHDGLQGPKGEPGIPAIPGTQGPKGQKGEPG-MPGHRGKNGPMGTSGSPG 97
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 35.4 bits (80), Expect = 0.036 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Frame = -3 Query: 300 PPHRESSSPAEG-PGNPAKNGSLGRD-QPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGT 127 PP A+G PG P G G D QP A P A G GP + RG+ P + Sbjct: 229 PPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNP-GAPGPAGPPGSPGERGICPKYCAI 287 Query: 126 DGSI 115 DG + Sbjct: 288 DGGV 291
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 35.4 bits (80), Expect = 0.036 Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 9/67 (13%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPR------SARTRRGL--LPGFRGTDG 121 PA PG P G G D P AG+TG R R RG+ LPG GT G Sbjct: 955 PAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPG 1014 Query: 120 SI-PTRA 103 + PT A Sbjct: 1015 KVGPTGA 1021 Score = 35.0 bits (79), Expect = 0.047 Identities = 20/49 (40%), Positives = 21/49 (42%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGS 118 PGNP G G R P G TGP G LPG GTDG+ Sbjct: 380 PGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPG-LPGAIGTDGT 427 Score = 34.3 bits (77), Expect = 0.081 Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 2/75 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PG 139 P P + S+ P G P G G P+ + PH G GP +RG PG Sbjct: 448 PPGSPGPQGSTGPQGNSGLPGDPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPG 507 Query: 138 FRGTDGSIPTRARRG 94 G G + R G Sbjct: 508 TLGPPGPVGERGAPG 522 Score = 32.7 bits (73), Expect = 0.24 Identities = 23/79 (29%), Positives = 29/79 (36%), Gaps = 8/79 (10%) Frame = -3 Query: 306 PYPPHRESSSPAEG--------PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 P P E +P E PG G G D P+ P G TGP + Sbjct: 703 PLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQG--- 759 Query: 150 LLPGFRGTDGSIPTRARRG 94 +PG RG G+ + RG Sbjct: 760 -MPGERGIAGTPGPKGDRG 777 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----LPGFRGTDGS 118 PGN GS G P+ GS+GP+ ++ G LPG RG G+ Sbjct: 521 PGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGN 574 Score = 27.7 bits (60), Expect = 7.6 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPG 139 P P + + P E PG P + G+ G+D + P+ G G R R +G PG Sbjct: 614 PGPKGSNGDPGKPGEAGNPGVPGQRGAPGKD---GKVGPYGPPGPPGLRGERGEQG-PPG 669 Query: 138 FRGTDG 121 G G Sbjct: 670 PTGFQG 675 Score = 27.7 bits (60), Expect = 7.6 Identities = 18/67 (26%), Positives = 27/67 (40%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIP 112 R + P G+P G++G D P + G++GP + PG G GS Sbjct: 404 RGETGPPGPVGSPGLPGAIGTDGTPGPKGPTGSPGTSGPPGSAGP----PGSPGPQGSTG 459 Query: 111 TRARRGL 91 + GL Sbjct: 460 PQGNSGL 466 Score = 27.3 bits (59), Expect = 9.9 Identities = 22/65 (33%), Positives = 28/65 (43%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGF 136 +P P P S P PG P ++G GR+ + AGS G R G LPG Sbjct: 244 DPGPMGPIG-SRGPEGPPGKPGEDGEPGRNGNPGEV---GFAGSPGARGFPGAPG-LPGL 298 Query: 135 RGTDG 121 +G G Sbjct: 299 KGHRG 303
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 35.0 bits (79), Expect = 0.047 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRG 130 YP + PG P NG G + P G TGPR R RG+ PG +G Sbjct: 875 YPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 934 Query: 129 TDG 121 G Sbjct: 935 NSG 937 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG+P K G G + P G GPR + G + G +GT G Sbjct: 762 PGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADG-IRGLKGTKG 808 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 7/68 (10%) Frame = -3 Query: 300 PPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSA------RTRRGLLP 142 PP + G PG G G P T P G GP A R ++GL Sbjct: 1151 PPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLF- 1209 Query: 141 GFRGTDGS 118 G +G +GS Sbjct: 1210 GQKGDEGS 1217
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 35.0 bits (79), Expect = 0.047 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRG 130 YP + PG P NG G + P G TGPR R RG+ PG +G Sbjct: 875 YPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 934 Query: 129 TDG 121 G Sbjct: 935 NSG 937 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG+P K G G + P G GPR + G + G +GT G Sbjct: 762 PGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADG-IRGLKGTKG 808 Score = 28.5 bits (62), Expect = 4.4 Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 1/70 (1%) Frame = -3 Query: 300 PPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTD 124 PP + G PG G G P T P G GP A PG RG Sbjct: 1151 PPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGE----PGPRGQQ 1206 Query: 123 GSIPTRARRG 94 G + G Sbjct: 1207 GLFGQKGDEG 1216
>COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1431 Score = 35.0 bits (79), Expect = 0.047 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -3 Query: 270 EGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 +GP G P GS+G P P GSTGP+ R G LPG +G G Sbjct: 655 QGPRGLPGVPGSVGPRGPNGSPGPQGPPGSTGPQGLRGEVG-LPGVKGDKG 704
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 35.0 bits (79), Expect = 0.047 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRG 130 YP + PG P NG G + P G TGPR R RG+ PG +G Sbjct: 877 YPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 936 Query: 129 TDG 121 G Sbjct: 937 NSG 939 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG+P K G G + P G GPR + G + G +GT G Sbjct: 764 PGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADG-IRGLKGTKG 810 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 7/68 (10%) Frame = -3 Query: 300 PPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSA------RTRRGLLP 142 PP + G PG G G P T P G GP A R ++GL Sbjct: 1153 PPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPTGQPGPSGADGEPGPRGQQGLF- 1211 Query: 141 GFRGTDGS 118 G +G +GS Sbjct: 1212 GQKGDEGS 1219
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 35.0 bits (79), Expect = 0.047 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRG 130 YP + PG P NG G + P G TGPR R RG+ PG +G Sbjct: 877 YPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 936 Query: 129 TDG 121 G Sbjct: 937 NSG 939 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG+P K G G + P G GPR + G + G +GT G Sbjct: 764 PGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADG-IRGLKGTKG 810 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 7/68 (10%) Frame = -3 Query: 300 PPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSA------RTRRGLLP 142 PP + G PG G G P T P G GP A R ++GL Sbjct: 1153 PPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLF- 1211 Query: 141 GFRGTDGS 118 G +G +GS Sbjct: 1212 GQKGDEGS 1219
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 35.0 bits (79), Expect = 0.047 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Frame = -3 Query: 297 PHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGF-RGTDG 121 P RE + GPG P + G +P + GPR A + G PG R + G Sbjct: 189 PERERPAARPGPGGPRPGPAQGGPRPGPGQGAPRPGATPGPRPAAAQGGPRPGGPRPSPG 248 Query: 120 SIPTRARRGLWCRR 79 S+P R G +R Sbjct: 249 SMPPRPNPGAMPQR 262
>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early| protein IE110) (VMW110) (Alpha-0 protein) Length = 775 Score = 35.0 bits (79), Expect = 0.047 Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 4/65 (6%) Frame = -3 Query: 306 PYPPHRESSSPAEG----PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPG 139 P PHR ++P G PG PA + G +PRA P A GP G P Sbjct: 369 PASPHRPPAAPMPGSAPRPGPPASAAASGPARPRAAVAPCVRAPPPGPGPRAPAPGAEPA 428 Query: 138 FRGTD 124 R D Sbjct: 429 ARPAD 433
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 34.7 bits (78), Expect = 0.062 Identities = 21/68 (30%), Positives = 27/68 (39%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P P PP ++ P P + + PRA+ P AA GPR R G Sbjct: 26 PPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDSSCGRP 85 Query: 132 GTDGSIPT 109 GT G+ T Sbjct: 86 GTPGAAST 93
>CO6A3_HUMAN (P12111) Collagen alpha-3(VI) chain precursor| Length = 3176 Score = 34.7 bits (78), Expect = 0.062 Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 13/70 (18%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHA--AAGSTGPRSARTRRGLL-----------PGFRGTD 124 PG P G +G PR +T GS G R + RG PG GT Sbjct: 2275 PGEPGPKGGIGNPGPRGETGDDGRDGVGSEGRRGKKGERGFPGYPGPKGNPGEPGLNGTT 2334 Query: 123 GSIPTRARRG 94 G R RRG Sbjct: 2335 GPKGIRGRRG 2344 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/58 (36%), Positives = 22/58 (37%) Frame = -3 Query: 267 GPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRG 94 GPG KNG GR P P A GP PGF G G TR +G Sbjct: 2190 GPGETGKNGGFGRRGP-----PGAKGNKGGPGQ--------PGFEGEQG---TRGAQG 2231 Score = 28.5 bits (62), Expect = 4.4 Identities = 20/66 (30%), Positives = 25/66 (37%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIP 112 R S PG + G LGR + P G+ GPR G G DG + Sbjct: 2251 RGSGGARGAPGERGRTGPLGRKGEPGEPGPKGGIGNPGPRGE-------TGDDGRDG-VG 2302 Query: 111 TRARRG 94 + RRG Sbjct: 2303 SEGRRG 2308 Score = 27.3 bits (59), Expect = 9.9 Identities = 21/66 (31%), Positives = 23/66 (34%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIP 112 R + PA G P G G PR A G G R+G PG G G I Sbjct: 2227 RGAQGPAGPAGPPGLIGEQGISGPRGSGGARGAPGERGRTGPLGRKG-EPGEPGPKGGIG 2285 Query: 111 TRARRG 94 RG Sbjct: 2286 NPGPRG 2291
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 34.7 bits (78), Expect = 0.062 Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARRG 94 PG P +G G+D PR T P G G + G LPG G GS R G Sbjct: 746 PGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETG 804 Score = 33.5 bits (75), Expect = 0.14 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 267 GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 GP G P KNG G P T P G TGP + +G LPG G G Sbjct: 603 GPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQG-LPGTGGPPG 651 Score = 33.1 bits (74), Expect = 0.18 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIPTRARRG 94 PG+P GS G+ P G GP R + G++ PG +G DG+ RG Sbjct: 539 PGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERG 597 Score = 32.3 bits (72), Expect = 0.31 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Frame = -3 Query: 273 AEGPGNPA-KNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDG 121 A GP PA NG+ G + + A G GPR R G+ +PG +G DG Sbjct: 412 ARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDG 465 Score = 30.0 bits (66), Expect = 1.5 Identities = 27/96 (28%), Positives = 32/96 (33%), Gaps = 22/96 (22%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGPGNPAKN----------------------GSLGRDQPRAQTKP 202 N +P PP S +GP PA N GS G P P Sbjct: 887 NGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGP 946 Query: 201 HAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRG 94 AG TG R G +PG RG+ G + G Sbjct: 947 LGIAGITGARGLAGPPG-MPGPRGSPGPQGVKGESG 981 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/58 (31%), Positives = 23/58 (39%) Frame = -3 Query: 267 GPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRG 94 G G P KNG+ G PR + G G + + G PG G +G RG Sbjct: 430 GAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDG-SPGEPGANGLPGAAGERG 486 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -3 Query: 267 GPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 GPG P G G++ +T P G TGP + G PG +G G Sbjct: 598 GPGGPGPQGPPGKN---GETGPQGPPGPTGPGGDKGDTG-PPGPQGLQG 642 Score = 27.3 bits (59), Expect = 9.9 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 5/69 (7%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKN---GSLGRDQPRAQTKPHAAAGSTGP--RSARTRRGL 148 P P P S P PG+P G G+ P P A G +GP + + R Sbjct: 179 PGPPGPPGTSGHPGS-PGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPG 237 Query: 147 LPGFRGTDG 121 PG RG G Sbjct: 238 RPGERGLPG 246
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 34.3 bits (77), Expect = 0.081 Identities = 21/58 (36%), Positives = 25/58 (43%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRGL 91 PG P G G+ R +T P AG GP AR G G RG G + RG+ Sbjct: 1051 PGAPGPVGPAGKSGDRGETGPAGPAGPVGPAGARGPAG-PQGPRGDKGETGEQGDRGI 1107 Score = 31.6 bits (70), Expect = 0.52 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 + P PG+P +NG+ G+ PR G+ GP AR G Sbjct: 283 AGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDG 326 Score = 30.4 bits (67), Expect = 1.2 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 13/88 (14%) Frame = -3 Query: 315 NPSPYPPHR---ESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGSTG------PRS 169 +P P P E+ P E PG GS G P +T P AG G P Sbjct: 513 SPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPG 572 Query: 168 ARTRRGLL--PGFRGTDGSIPTRARRGL 91 AR + G++ PG +G G RG+ Sbjct: 573 ARGQAGVMGFPGPKGAAGEPGKAGERGV 600 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Frame = -3 Query: 291 RESSSPAEGPGN---PAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGT 127 R + PA PG P G G P A G+ GP+ +RG+ LPG RG Sbjct: 910 RGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGE 969 Query: 126 DG 121 G Sbjct: 970 RG 971 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Frame = -3 Query: 267 GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARR 97 GP G P K G G R P G GP R G G G DGS + R Sbjct: 977 GPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDR 1036 Query: 96 G 94 G Sbjct: 1037 G 1037 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 2/66 (3%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPT 109 S A PG P G G PR +T P G GP G PG G G+ T Sbjct: 889 SGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGT 948 Query: 108 RARRGL 91 +G+ Sbjct: 949 PGPQGI 954 Score = 27.3 bits (59), Expect = 9.9 Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 2/75 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPG 139 P P P + P E G P GS GRD G GP A PG Sbjct: 997 PGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGA-------PG 1049 Query: 138 FRGTDGSIPTRARRG 94 G G + + G Sbjct: 1050 APGAPGPVGPAGKSG 1064 Score = 27.3 bits (59), Expect = 9.9 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAA------AGSTGPRSARTRRGLLPGFRG 130 R + P G+P K+G G P P A +G +GP RG PG RG Sbjct: 745 RGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARG-APGDRG 803 Query: 129 TDG 121 G Sbjct: 804 EPG 806
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 34.3 bits (77), Expect = 0.081 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRGL 91 PG P G G++ R +T P AG GP AR G G RG G + RG+ Sbjct: 1040 PGAPGPVGPAGKNGDRGETGPAGPAGPIGPAGARGPAG-PQGPRGDKGETGEQGDRGI 1096 Score = 32.7 bits (73), Expect = 0.24 Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 13/88 (14%) Frame = -3 Query: 315 NPSPYPPHR---ESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGS------TGPRS 169 +P P P E+ P E PG GS G P +T P AG GP Sbjct: 502 SPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPAGPPG 561 Query: 168 ARTRRGLL--PGFRGTDGSIPTRARRGL 91 AR + G++ PG +GT G RG+ Sbjct: 562 ARGQAGVMGFPGPKGTAGEPGKAGERGV 589 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDG 121 P PG+P + G G P P +AGS G G + PG RG G Sbjct: 1108 PPGSPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTG 1161 Score = 29.3 bits (64), Expect = 2.6 Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 2/66 (3%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPT 109 S A PG P G G PR +T P G GP G PG G GS T Sbjct: 878 SGNAGPPGPPGPVGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGSPGT 937 Query: 108 RARRGL 91 +G+ Sbjct: 938 PGPQGI 943 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/75 (28%), Positives = 25/75 (33%), Gaps = 2/75 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPG 139 P P P + P E G+P GS GRD G GP A PG Sbjct: 986 PGPMGPPGLAGPPGESGREGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGA-------PG 1038 Query: 138 FRGTDGSIPTRARRG 94 G G + + G Sbjct: 1039 APGAPGPVGPAGKNG 1053 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Frame = -3 Query: 291 RESSSPAEGPGN---PAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGT 127 R + PA PG P G G P + G+ GP+ +RG+ LPG RG Sbjct: 899 RGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGSPGTPGPQGIAGQRGVVGLPGQRGK 958 Query: 126 DG 121 G Sbjct: 959 RG 960 Score = 28.9 bits (63), Expect = 3.4 Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 8/81 (9%) Frame = -3 Query: 312 PSPYPPHRESSSPAE----GPGNPA----KNGSLGRDQPRAQTKPHAAAGSTGPRSARTR 157 P P E P E GP PA NG+ G D + T A G+ G + A Sbjct: 659 PGPSGARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKGDT---GAPGAPGSQGAPGL 715 Query: 156 RGLLPGFRGTDGSIPTRARRG 94 +G +PG RG G + RG Sbjct: 716 QG-MPGERGAAGLPGPKGDRG 735 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 14/69 (20%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-------------- 145 + P PG+P +NG+ G+ PR G G AR G + Sbjct: 272 AGPKGEPGSPGENGTPGQMGPRGLPGERGRPGPPGTAGARGNDGAVGAAGPPGPTGPTGP 331 Query: 144 PGFRGTDGS 118 PGF G G+ Sbjct: 332 PGFPGAAGA 340 Score = 28.1 bits (61), Expect = 5.8 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAA------AGSTGPRSARTRRGLLPGFRG 130 R + P G+P K+G G P P A AG +GP RG PG RG Sbjct: 734 RGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARG-APGDRG 792 Query: 129 TDG 121 G Sbjct: 793 EAG 795 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 10/55 (18%) Frame = -3 Query: 309 SPYPPHRESSSPAEGP----------GNPAKNGSLGRDQPRAQTKPHAAAGSTGP 175 SP P + S A GP G+P K+G G P P G +GP Sbjct: 1111 SPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGDSGP 1165 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Frame = -3 Query: 267 GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 GP G P K G G R P G GP R G PG G+ G Sbjct: 966 GPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREG-SPGAEGSPG 1014 Score = 27.3 bits (59), Expect = 9.9 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 5/79 (6%) Frame = -3 Query: 312 PSPYPPHRESSSP----AEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL 148 P P P + +P A+G G P GS G + AAG GP+ R G Sbjct: 680 PGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGP 739 Query: 147 LPGFRGTDGSIPTRARRGL 91 +G DGS RGL Sbjct: 740 ----KGADGSPGKDGVRGL 754
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 34.3 bits (77), Expect = 0.081 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRGL 91 PG P G G++ R +T P AG GP AR G G RG G + RG+ Sbjct: 1040 PGAPGPVGPAGKNGDRGETGPAGPAGPIGPAGARGPAG-PQGPRGDKGETGEQGDRGI 1096 Score = 33.5 bits (75), Expect = 0.14 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 10/76 (13%) Frame = -3 Query: 288 ESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGS------TGPRSARTRRGLL--PG 139 E+ P E PG GS G P +T P AG GP AR + G++ PG Sbjct: 514 EAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPAGPPGARGQAGVMGFPG 573 Query: 138 FRGTDGSIPTRARRGL 91 +GT G RGL Sbjct: 574 PKGTAGEPGKAGERGL 589 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDG 121 P PG+P + G G P P +AGS G G + PG RG G Sbjct: 1108 PPGSPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTG 1161 Score = 29.3 bits (64), Expect = 2.6 Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 2/66 (3%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPT 109 S A PG P G G PR +T P G GP G PG G GS T Sbjct: 878 SGNAGPPGPPGPVGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGSPGT 937 Query: 108 RARRGL 91 +G+ Sbjct: 938 PGPQGI 943 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/75 (28%), Positives = 25/75 (33%), Gaps = 2/75 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPG 139 P P P + P E G+P GS GRD G GP A PG Sbjct: 986 PGPMGPPGLAGPPGESGREGSPGAEGSPGRDGAPGAKGDRGETGPAGPPGA-------PG 1038 Query: 138 FRGTDGSIPTRARRG 94 G G + + G Sbjct: 1039 APGAPGPVGPAGKNG 1053 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Frame = -3 Query: 291 RESSSPAEGPGN---PAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGT 127 R + PA PG P G G P + G+ GP+ +RG+ LPG RG Sbjct: 899 RGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGSPGTPGPQGIAGQRGVVGLPGQRGE 958 Query: 126 DG 121 G Sbjct: 959 RG 960 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAA------AGSTGPRSARTRRGLLPGFRG 130 R + P G+P K+G+ G P P A AG +GP RG PG RG Sbjct: 734 RGDAGPKGADGSPGKDGARGLTGPIGPPGPAGAPGDKGEAGPSGPPGPTGARG-APGDRG 792 Query: 129 TDG 121 G Sbjct: 793 EAG 795 Score = 28.9 bits (63), Expect = 3.4 Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 8/81 (9%) Frame = -3 Query: 312 PSPYPPHRESSSPAE----GPGNPA----KNGSLGRDQPRAQTKPHAAAGSTGPRSARTR 157 P P E P E GP PA NG+ G D + T A G+ G + A Sbjct: 659 PGPSGARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKGDT---GAPGAPGSQGAPGL 715 Query: 156 RGLLPGFRGTDGSIPTRARRG 94 +G +PG RG G + RG Sbjct: 716 QG-MPGERGAAGLPGPKGDRG 735 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-----PGFRGTDG 121 + P PG+P +NG+ G+ PR G G AR G + PG G G Sbjct: 272 AGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPPGTAGARGNDGAVGAAGPPGPTGPTG 330 Score = 28.1 bits (61), Expect = 5.8 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 5/79 (6%) Frame = -3 Query: 312 PSPYPPHRESSSP----AEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL 148 P P P + +P A+G G P GS G + AAG GP+ R G Sbjct: 680 PGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGP 739 Query: 147 LPGFRGTDGSIPTRARRGL 91 +G DGS RGL Sbjct: 740 ----KGADGSPGKDGARGL 754 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 10/55 (18%) Frame = -3 Query: 309 SPYPPHRESSSPAEGP----------GNPAKNGSLGRDQPRAQTKPHAAAGSTGP 175 SP P + S A GP G+P K+G G P P G +GP Sbjct: 1111 SPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGDSGP 1165 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Frame = -3 Query: 267 GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 GP G P K G G R P G GP R G PG G+ G Sbjct: 966 GPSGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREG-SPGAEGSPG 1014 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Frame = -3 Query: 267 GPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----LPGFRGTDGS 118 GPG+ G+ G P+ + A G GP+ + G LPG +G GS Sbjct: 478 GPGSRGFPGADGVAGPKGPSGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLTGS 532
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 34.3 bits (77), Expect = 0.081 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRGL 91 PG P G G++ R +T P AG GP AR G G RG G + RG+ Sbjct: 1040 PGAPGPVGPAGKNGDRGETGPAGPAGPPGPAGARGPAG-PQGPRGDKGETGEQGDRGM 1096 Score = 34.3 bits (77), Expect = 0.081 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 + P PG+P +NG+ G+ PR G +GP AR G PG G G Sbjct: 272 AGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGARGNDG-APGAAGPPG 324 Score = 33.9 bits (76), Expect = 0.11 Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDG 121 PA PG P + GS G D P A G+ GP+ +RG+ LPG RG G Sbjct: 913 PAGPPGPPGEKGSPGADGPIG------APGTPGPQGIAGQRGVVGLPGQRGERG 960 Score = 31.6 bits (70), Expect = 0.52 Identities = 19/60 (31%), Positives = 22/60 (36%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 P R + P G K+G G P T P G GP A PGF+G G Sbjct: 584 PGERGAPGPPGAVGAAGKDGEAGAQGPPGPTGPAGERGEQGPAGA-------PGFQGLPG 636 Score = 29.6 bits (65), Expect = 2.0 Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 10/75 (13%) Frame = -3 Query: 288 ESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGS------TGPRSARTRRGLL--PG 139 E+ P E PG GS G P +T P AG GP AR + G++ PG Sbjct: 514 EAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPAGPPGARGQAGVMGFPG 573 Query: 138 FRGTDGSIPTRARRG 94 +G G RG Sbjct: 574 PKGAAGEPGKPGERG 588 Score = 29.3 bits (64), Expect = 2.6 Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 6/75 (8%) Frame = -3 Query: 300 PPHRESSSPAEGP----GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPG 139 PP + A GP G P G+ G P T AAG GP GL PG Sbjct: 829 PPGPAGPTGAPGPAGZVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNIGLPGPPG 888 Query: 138 FRGTDGSIPTRARRG 94 G +GS R G Sbjct: 889 PAGKZGSKGPRGETG 903 Score = 28.1 bits (61), Expect = 5.8 Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Frame = -3 Query: 267 GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARR 97 GP G P K G G R P G GP R G G G DG+ + R Sbjct: 966 GPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGEAGREGAPGAEGAPGRDGAAGPKGDR 1025 Query: 96 G 94 G Sbjct: 1026 G 1026 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/50 (36%), Positives = 19/50 (38%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSI 115 PG P G G PR +T P G GP G G G DG I Sbjct: 884 PGPPGPAGKZGSKGPRGETGPAGRPGEPGPAGPPGPPG-EKGSPGADGPI 932 Score = 27.7 bits (60), Expect = 7.6 Identities = 19/70 (27%), Positives = 25/70 (35%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTD 124 +P R P G NG+ G D + A G+ GP +PG RG Sbjct: 670 FPGERGVQGPPGPQGPRGANGAPGNDGAKGDAGAPGAPGNEGPPGLEG----MPGERGAA 725 Query: 123 GSIPTRARRG 94 G + RG Sbjct: 726 GLPGAKGDRG 735 Score = 27.7 bits (60), Expect = 7.6 Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 6/60 (10%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHA------AAGSTGPRSARTRRGLLPGFRGTDG 121 S PA GN G+ G P P A G TGP+ AR G G RG G Sbjct: 305 SGPAGARGNDGAPGAAGPPGPTGPAGPPGFPGAAGAKGETGPQGARGSEG-PQGSRGEPG 363 Score = 27.3 bits (59), Expect = 9.9 Identities = 22/72 (30%), Positives = 25/72 (34%), Gaps = 1/72 (1%) Frame = -3 Query: 306 PYPPHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 P PP +GP G P + G+ G PR P G G R PG RG Sbjct: 179 PGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGR----PGQRG 234 Query: 129 TDGSIPTRARRG 94 G R G Sbjct: 235 PPGPQGARGLPG 246
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 33.9 bits (76), Expect = 0.11 Identities = 21/62 (33%), Positives = 24/62 (38%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARR 97 P PG P G G+ R +T P G GP AR G G RG G R Sbjct: 609 PPGAPGAPGPVGPAGKSGDRGETGPAGPIGPVGPAGARGPAG-PQGPRGBKGZTGZZGBR 667 Query: 96 GL 91 G+ Sbjct: 668 GI 669 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Frame = -3 Query: 291 RESSSPAEGPGN---PAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGT 127 R + PA PG P G G P A G+ GP+ +RG+ LPG RG Sbjct: 472 RGETGPAGRPGEVGPPGPPGPAGEKGAPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGE 531 Query: 126 DG 121 G Sbjct: 532 RG 533 Score = 29.6 bits (65), Expect = 2.0 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 3/73 (4%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPA-KNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRG 130 PP ++ GP PA K GS G PR +T P G GP G PG G Sbjct: 447 PPGPSGNAGPPGPPGPAGKEGSKG---PRGETGPAGRPGEVGPPGPPGPAGEKGAPGADG 503 Query: 129 TDGSIPTRARRGL 91 G+ T +G+ Sbjct: 504 PAGAPGTPGPQGI 516 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDG 121 P PG+P + G G P P +AGS G G + PG RG G Sbjct: 681 PPGPPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTG 734 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Frame = -3 Query: 267 GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARR 97 GP G P K G G R P G GP R G G G DGS + R Sbjct: 539 GPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDR 598 Query: 96 G 94 G Sbjct: 599 G 599
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 33.9 bits (76), Expect = 0.11 Identities = 20/57 (35%), Positives = 24/57 (42%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRG 94 PG P NG G + +T GS GPR G PG +G DG+ RG Sbjct: 386 PGGPGSNGKPGPPGSQGETGRPGPPGSPGPRGQPGVMG-FPGPKGNDGAPGKNGERG 441 Score = 33.5 bits (75), Expect = 0.14 Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 267 GPGNPA-KNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 GP PA KNG G P T P G TGP + +G LPG G G Sbjct: 447 GPQGPAGKNGETGPQGPPGPTGPSGDKGDTGPPGPQGLQG-LPGTSGPPG 495 Score = 32.0 bits (71), Expect = 0.40 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Frame = -3 Query: 306 PYPPHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 P PP G G P KNG+ G PR + + G GP+ + G PG G Sbjct: 260 PGPPGTNGVPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAGPKGEDGKDG-SPGEPG 318 Query: 129 TDGSIPTRARRGL 91 +G RG+ Sbjct: 319 ANGLPGAAGERGV 331 Score = 31.2 bits (69), Expect = 0.69 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARRG 94 PG+ +G+ G+D PR T P G G + G +PG G G R +G Sbjct: 590 PGSSGVDGAPGKDGPRGPTGPIGPPGPAGQPGDKGESGAPGVPGIAGPRGGPGERGEQG 648 Score = 30.0 bits (66), Expect = 1.5 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 4/79 (5%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGP-GNPAKNG---SLGRDQPRAQTKPHAAAGSTGPRSARTRRGL 148 N +P PP + +GP G P NG S G P+ + P G+ GP+ Sbjct: 731 NGNPGPPGSSGAPGKDGPPGPPGSNGAPGSPGISGPKGDSGPPGERGAPGPQGP------ 784 Query: 147 LPGFRGTDGSIPTRARRGL 91 PG G G RGL Sbjct: 785 -PGAPGPLGIAGLTGARGL 802 Score = 28.5 bits (62), Expect = 4.4 Identities = 20/69 (28%), Positives = 25/69 (36%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 P + PA PG P G G+D + G GP + G +PGF G G Sbjct: 50 PGEPGQAGPAGPPGPPGAIGPSGKDGESGRPGRPGPRGFPGPPGMKGPAG-MPGFPGMKG 108 Query: 120 SIPTRARRG 94 R G Sbjct: 109 HRGFDGRNG 117
>C1QC_MOUSE (Q02105) Complement C1q subcomponent subunit C precursor| Length = 246 Score = 33.9 bits (76), Expect = 0.11 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG P K+G G P+ + A G+ GP+ + G +PG RG +G Sbjct: 43 PGAPGKDGHDGLQGPKGEPGIPAVPGTQGPKGQKGEPG-MPGHRGKNG 89
>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 33.9 bits (76), Expect = 0.11 Identities = 22/62 (35%), Positives = 25/62 (40%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGT 127 P PP P PG P G G T P + GS GPR + G +PG RG Sbjct: 301 PGPP-----GPPGDPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPG-VPGSRGF 354 Query: 126 DG 121 G Sbjct: 355 PG 356 Score = 31.6 bits (70), Expect = 0.52 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPT 109 P GNP + G G + R G GPR + +G LPG +G G PT Sbjct: 701 PKGSVGNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGMQGEQGATGLPGIQGPPGRAPT 758 Score = 30.4 bits (67), Expect = 1.2 Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 5/62 (8%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-----PGFRGTDGSIPTRARR 97 G P K G LG Q P G GPR RG + PG G GS+ + Sbjct: 592 GAPGKPGQLGSSGKPGQQGPPGEVGPRGPRGLPGSRGPVGPEGSPGIPGKLGSVGSPGLP 651 Query: 96 GL 91 GL Sbjct: 652 GL 653
>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor| Length = 675 Score = 33.5 bits (75), Expect = 0.14 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDG 121 PG P + G G P+ P G GP+ RGL+ PG G DG Sbjct: 254 PGPPGRAGDQGNKGPQGFRGPKGDTGRPGPKGNPGARGLIGEPGIPGKDG 303 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 5/57 (8%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----LPGFRGTDG 121 P PG G G+D + P G GP+ A + G LPG G DG Sbjct: 26 PQGPPGPRGPPGPSGKDGIDGEPGPSGLPGPPGPKGAPGKPGAAGEAGLPGLPGVDG 82
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 33.5 bits (75), Expect = 0.14 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRGL 91 PG P G G++ R +T P AG GP AR G G RG G + RG+ Sbjct: 1047 PGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGARGPAG-PQGPRGDKGETGEQGDRGI 1103 Score = 31.6 bits (70), Expect = 0.52 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 + P PG+P +NG+ G+ PR G+ GP AR G Sbjct: 279 AGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDG 322 Score = 30.4 bits (67), Expect = 1.2 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 13/88 (14%) Frame = -3 Query: 315 NPSPYPPHR---ESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGSTG------PRS 169 +P P P E+ P E PG GS G P +T P AG G P Sbjct: 509 SPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPG 568 Query: 168 ARTRRGLL--PGFRGTDGSIPTRARRGL 91 AR + G++ PG +G G RG+ Sbjct: 569 ARGQAGVMGFPGPKGAAGEPGKAGERGV 596 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Frame = -3 Query: 291 RESSSPAEGPGN---PAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGT 127 R + PA PG P G G P A G+ GP+ +RG+ LPG RG Sbjct: 906 RGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGE 965 Query: 126 DG 121 G Sbjct: 966 RG 967 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDG 121 P PG+P + G G P P +AGS G G + PG RG G Sbjct: 1115 PPGPPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTG 1168 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/75 (28%), Positives = 25/75 (33%), Gaps = 2/75 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPG 139 P P P + P E G+P GS GRD G GP A PG Sbjct: 993 PGPMGPPGLAGPPGESGREGSPGAEGSPGRDGSPGPKGDRGETGPAGPPGA-------PG 1045 Query: 138 FRGTDGSIPTRARRG 94 G G + + G Sbjct: 1046 APGAPGPVGPAGKNG 1060 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAA------AGSTGPRSARTRRGLLPGFRG 130 R + P G+P K+G G P P A AG +GP RG PG RG Sbjct: 741 RGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARG-APGDRG 799 Query: 129 TDG 121 G Sbjct: 800 EPG 802 Score = 28.1 bits (61), Expect = 5.8 Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Frame = -3 Query: 267 GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARR 97 GP G P K G G R P G GP R G G G DGS + R Sbjct: 973 GPSGEPGKQGPSGTSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRDGSPGPKGDR 1032 Query: 96 G 94 G Sbjct: 1033 G 1033
>YQ33_CAEEL (Q09233) Putative cuticle collagen C09G5.3| Length = 283 Score = 33.1 bits (74), Expect = 0.18 Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 12/83 (14%) Frame = -3 Query: 306 PYPPHRESSSPAEG----PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-- 145 P PP + + +G PG P +NG DQP T G GP + G Sbjct: 96 PGPPGEKGNDGVDGVDGIPGFPGENGGAALDQPADGTCIKCPPGPRGPPGPQGEEGPSGD 155 Query: 144 ------PGFRGTDGSIPTRARRG 94 PG G DG+ T + G Sbjct: 156 VGEDGEPGVPGNDGADGTPGKSG 178
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 33.1 bits (74), Expect = 0.18 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Frame = -3 Query: 288 ESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----LPGFRGTD 124 ++ +P E PG + G G+D P AAG TG R RG L G +GT Sbjct: 425 KNGAPGE-PGAHGEQGDAGKDGETGAAGPPGAAGPTGARGPPGPRGQQGFQGLAGAQGTP 483 Query: 123 GSIPTRARRG 94 G RG Sbjct: 484 GEAGKTGERG 493 Score = 30.8 bits (68), Expect = 0.89 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 9/83 (10%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQP---------RAQTKPHAAAGSTGPRSART 160 P P R ++ PA G+P G+ G+ P + P GS G R Sbjct: 521 PRGMPGERGATGPAGPTGSPGVAGAKGQGGPPGPAGLVGLPGERGPKGVGGSKGSRGDIG 580 Query: 159 RRGLLPGFRGTDGSIPTRARRGL 91 RG G RG DG R GL Sbjct: 581 PRG-KAGERGKDGERGERGENGL 602 Score = 30.0 bits (66), Expect = 1.5 Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 15/81 (18%) Frame = -3 Query: 288 ESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL----------- 145 + S +GP G P G G PR QT G +G R GL Sbjct: 111 QGKSGNQGPDGGPGPAGPSGPIGPRGQTGERGRDGKSGLPGLRGVDGLAGPPGPPGPIGS 170 Query: 144 ---PGFRGTDGSIPTRARRGL 91 PGF GT GS R + G+ Sbjct: 171 TGSPGFPGTPGSKGDRGQSGI 191 Score = 29.3 bits (64), Expect = 2.6 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 2/71 (2%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGT 127 P + SS P G P G G+ R AGS GP+ R G LPG G Sbjct: 276 PGVKGSSGPPGDVGAPGHAGEAGK---RGSPGSPGPAGSPGPQGDRGLPGSRGLPGMTGA 332 Query: 126 DGSIPTRARRG 94 G++ +G Sbjct: 333 SGAMGIPGEKG 343 Score = 28.5 bits (62), Expect = 4.4 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Frame = -3 Query: 306 PYPPHRESSSPAE--GPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P P ++ +P + PG G GR R + AGS G +RG LPG Sbjct: 833 PTGPSGQAGAPGQEGAPGKDGLPGLAGRPGERGEPGVAGRAGSQGLAGLMGQRG-LPGAA 891 Query: 132 GTDGSIPTRARRG 94 G G R G Sbjct: 892 GPPGDRGERGEPG 904 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 5/53 (9%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-----PGFRGTDG 121 PGNP +G G+D G GP+ + GL PG RG G Sbjct: 372 PGNPGSDGRPGKDGRPGIRGKDGKQGEQGPQGPQGLAGLQGRAGPPGARGEPG 424
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 33.1 bits (74), Expect = 0.18 Identities = 21/63 (33%), Positives = 24/63 (38%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGT 127 P PP + AEGP P G G PR P + G TG PG G Sbjct: 574 PGPPGEDGERGAEGP--PGPTGQAGEPGPRGLLGPRGSPGPTG----------RPGVTGI 621 Query: 126 DGS 118 DG+ Sbjct: 622 DGA 624 Score = 32.3 bits (72), Expect = 0.31 Identities = 18/61 (29%), Positives = 26/61 (42%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARR 97 P GPG+P G G P + + G GP G LPG G++G + ++ Sbjct: 981 PKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAGGIG-LPGQSGSEGPVGPAGKK 1039 Query: 96 G 94 G Sbjct: 1040 G 1040 Score = 31.2 bits (69), Expect = 0.69 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARRG 94 PG P + G +G PH A G GP+ G LPG G G++ + RG Sbjct: 1153 PGPPGEKGEVG---DVGSMGPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGAVGEKGERG 1208 Score = 30.4 bits (67), Expect = 1.2 Identities = 18/55 (32%), Positives = 20/55 (36%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGS 118 S P+ G P K G G D + P G GP PG G DGS Sbjct: 1234 SGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPGD-------PGVSGIDGS 1281 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/72 (30%), Positives = 26/72 (36%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGT 127 P PP A GP P K G G + A G GP R G + G RG Sbjct: 1294 PGPPGASGEPGAPGP--PGKRGPSGHMGREGREGEKGAKGEPGPDGPPGRTGPM-GARGP 1350 Query: 126 DGSIPTRARRGL 91 G + RG+ Sbjct: 1351 PGRVGPEGLRGI 1362 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRGL 91 PG+P + G LG + QT P AG GP+ G L G RG G +GL Sbjct: 895 PGHPGQRGELGF---QGQTGPPGPAGVLGPQGKTGEVGPL-GERGPPGPPGPPGEQGL 948 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/48 (35%), Positives = 19/48 (39%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG P GS+G P +G TG RG PG RG G Sbjct: 796 PGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPGLEGERG-PPGSRGERG 842 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/66 (27%), Positives = 21/66 (31%), Gaps = 11/66 (16%) Frame = -3 Query: 285 SSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----------LPG 139 S P PG+ G G P P G G + RGL PG Sbjct: 678 SDGPLGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPG 737 Query: 138 FRGTDG 121 F+G G Sbjct: 738 FKGDVG 743
>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)| Length = 302 Score = 33.1 bits (74), Expect = 0.18 Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 3/69 (4%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG--PGNPAKNGSLGRD-QPRAQTKPHAAAGSTGPRSARTRRGLLP 142 P P P S P PG P G G D +P A P G GP RG+ P Sbjct: 227 PGPVGPPGPSGQPGNDGTPGQPGPKGPPGPDGKPGADGNP-GQPGPVGPPGTPGERGICP 285 Query: 141 GFRGTDGSI 115 + DG I Sbjct: 286 KYCAIDGGI 294
>CO6A2_MOUSE (Q02788) Collagen alpha-2(VI) chain precursor| Length = 1029 Score = 33.1 bits (74), Expect = 0.18 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPG 139 P P P E + G P +G G P AG G + A+ RG LPG Sbjct: 424 PGPRGPKGEPGRRGDPGTKGGPGSDGPKGEKGDPGPEGPRGLAGEVGSKGAKGDRG-LPG 482 Query: 138 FRGTDGSIPTRARRG 94 RG G++ ++G Sbjct: 483 PRGPQGALGEPGKQG 497
>CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor| Length = 1019 Score = 33.1 bits (74), Expect = 0.18 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPG 139 P P P E + G+P +G G P AG G + A+ RG LPG Sbjct: 414 PGPRGPKGEPGRRGDPGTKGSPGSDGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRG-LPG 472 Query: 138 FRGTDGSIPTRARRG 94 RG G++ ++G Sbjct: 473 PRGPQGALGEPGKQG 487
>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1774 Score = 33.1 bits (74), Expect = 0.18 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 4/77 (5%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGP----GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL 145 P P+ + A+GP G P K+G+ GRD G TGP+ Sbjct: 811 PVVQSPNSQPVPGAQGPPGPQGPPGKDGTPGRDGEPGDPGEDGRPGDTGPQ--------- 861 Query: 144 PGFRGTDGSIPTRARRG 94 GF GT G + + +G Sbjct: 862 -GFPGTPGDVGPKGEKG 877
>ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII subunit A3| (Elongin A3) (EloA3) (Transcription elongation factor B polypeptide 3C) Length = 546 Score = 32.7 bits (73), Expect = 0.24 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = -3 Query: 288 ESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPT 109 E+++ P + ++ R P Q +PH + S PR+ R R + P G PT Sbjct: 114 ENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPT 173 Query: 108 R 106 R Sbjct: 174 R 174
>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor| Length = 1691 Score = 32.7 bits (73), Expect = 0.24 Identities = 20/48 (41%), Positives = 21/48 (43%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG P G G PR Q G GP+ R G LPGF GT G Sbjct: 59 PGLPGFPGPEGPPGPRGQKGDDGIRGPPGPKGIRGPPG-LPGFPGTPG 105
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 32.7 bits (73), Expect = 0.24 Identities = 20/48 (41%), Positives = 21/48 (43%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG P G G PR Q G GP+ R G LPGF GT G Sbjct: 59 PGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPG-LPGFPGTPG 105 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 P PG P K G+ G + + G GP R G +PG +G DG Sbjct: 876 PPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSG-VPGLKGDDG 926
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 32.7 bits (73), Expect = 0.24 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Frame = -3 Query: 300 PPHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRG 130 PP R +GP G P + G G D P A G GP+ +RG+ LPG RG Sbjct: 868 PPGRAGEPGLQGPAGPPGEKGEPGDDGPSG------AEGPPGPQGLAGQRGIVGLPGQRG 921 Query: 129 TDG 121 G Sbjct: 922 ERG 924 Score = 30.8 bits (68), Expect = 0.89 Identities = 19/58 (32%), Positives = 24/58 (41%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRGL 91 PG+P G G+ R + G +GP AR +G G RG G RGL Sbjct: 1004 PGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQG-PQGPRGDKGEAGEPGERGL 1060 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-- 145 N P P A G G P G G+ P G GP+ AR + G++ Sbjct: 476 NGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGF 535 Query: 144 PGFRGTDGSIPTRARRGL 91 PG +G +G +GL Sbjct: 536 PGPKGANGEPGKAGEKGL 553 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 G P G+ G PR P A G GP+ + G + GF+G G Sbjct: 354 GAPGIAGAPGFPGPRGPPDPQGATGPLGPKGQTGKPG-IAGFKGEQG 399 Score = 28.5 bits (62), Expect = 4.4 Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 15/76 (19%) Frame = -3 Query: 300 PPHRESSSPAEGP----GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL---- 145 PP + ++ GP G P G G P+ + P G+ GP +RG Sbjct: 370 PPDPQGATGPLGPKGQTGKPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPG 429 Query: 144 -------PGFRGTDGS 118 PG RG G+ Sbjct: 430 GVGPIGPPGERGAPGN 445 Score = 27.7 bits (60), Expect = 7.6 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Frame = -3 Query: 267 GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARR 97 GP G P + G+ G R P G TGP R G G G DG+ + R Sbjct: 930 GPSGEPGQQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDR 989 Query: 96 G 94 G Sbjct: 990 G 990
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 32.7 bits (73), Expect = 0.24 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPT 109 P GNP + G G + R G GPR + +G LPG +G G PT Sbjct: 701 PKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPT 758 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARRGL 91 G P G G + Q P AG G R A RG+ LPG +G G R G+ Sbjct: 490 GEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGI 548 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 5/62 (8%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-----PGFRGTDGSIPTRARR 97 G P K G +G Q P G GP+ RG L PG G GS+ + Sbjct: 592 GAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLP 651 Query: 96 GL 91 GL Sbjct: 652 GL 653 Score = 27.3 bits (59), Expect = 9.9 Identities = 20/65 (30%), Positives = 22/65 (33%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P P R P PG P K GSLG P G G R PG + Sbjct: 620 PQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGE----PGPK 675 Query: 132 GTDGS 118 G G+ Sbjct: 676 GEQGA 680
>SCAR3_HUMAN (Q6AZY7) Scavenger receptor class A member 3 (Cellular stress| response gene protein) Length = 606 Score = 32.3 bits (72), Expect = 0.31 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = -3 Query: 267 GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRG 94 GP G+P G LG P+ Q G GP R PG +G+ GS T RG Sbjct: 481 GPKGDPGSLGPLGPQGPQGQPGEAGPVGERGPVGPRG----FPGLKGSKGSFGTGGPRG 535 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 5/66 (7%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----LPGFRGTDGSIP 112 P PG GS G PR Q P G GP G PG G GS Sbjct: 515 PRGFPGLKGSKGSFGTGGPRGQPGPKGDIGPPGPEGPPGSPGPSGPQGKPGIAGKTGSPG 574 Query: 111 TRARRG 94 R G Sbjct: 575 QRGAMG 580
>CAS4_EPHMU (P18503) Short-chain collagen C4 (Fragment)| Length = 366 Score = 32.3 bits (72), Expect = 0.31 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGS 118 PA PG P K+G+ G P P G TGP+ + +G + G +G GS Sbjct: 152 PAGTPGAPGKDGAQGPAGPAGPAGPAGPVGPTGPQGPQGPKGDVGPQGPQGAPGS 206
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 32.3 bits (72), Expect = 0.31 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPT 109 GNP GS G + R G+ GPR + +G LPG +G G PT Sbjct: 704 GNPGDPGSRGPEGSRGLPGMEGPRGAPGPRGLQGEQGAPGLPGSQGPAGKEPT 756 Score = 32.0 bits (71), Expect = 0.40 Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 8/73 (10%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEG----PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSAR--TRR 154 N P PP + + G PG P +G G D T P G GP AR + Sbjct: 296 NGPPGPPGPDGDAGKAGSPGLPGEPGADGLTGPDGSPGATGPKGQKGEPGPPGARGLPGK 355 Query: 153 GLL--PGFRGTDG 121 GLL PG G G Sbjct: 356 GLLGPPGPAGAAG 368 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 2/59 (3%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARRGL 91 G P G G + Q P G G R + RG+ LPG +G G R G+ Sbjct: 488 GGPGPQGLPGAPGGQGQRGPVGEEGPKGERGPQGTRGINGLPGPKGESGLPGVDGREGI 546
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 32.3 bits (72), Expect = 0.31 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 6/77 (7%) Frame = -3 Query: 306 PYPPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG-----LL 145 P P ++ S A+G PG+ G+ G + G+TGP R RG L Sbjct: 342 PGPSGQKGDSGAKGEPGHSGVQGAAGPAGEEGKRGSTGEVGATGPAGLRGARGGAGTRGL 401 Query: 144 PGFRGTDGSIPTRARRG 94 PG G G I RG Sbjct: 402 PGLEGRGGPIGMPGARG 418 Score = 30.4 bits (67), Expect = 1.2 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Frame = -3 Query: 294 HRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTD 124 H + SP GP G+ NG GR P A GSTGP G PGF G Sbjct: 198 HGANGSP--GPAGSRGLNGERGRAGPAGPAGARGADGSTGPAGPAGPLGAAGPPGFPGAP 255 Query: 123 G 121 G Sbjct: 256 G 256 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 9/81 (11%) Frame = -3 Query: 306 PYPPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL----- 145 P P + S+ A G G+P +G G + + G+ GP +RG Sbjct: 324 PGPQGPQGSTGARGLGGDPGPSGQKGDSGAKGEPGHSGVQGAAGPAGEEGKRGSTGEVGA 383 Query: 144 ---PGFRGTDGSIPTRARRGL 91 G RG G TR GL Sbjct: 384 TGPAGLRGARGGAGTRGLPGL 404 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/62 (27%), Positives = 20/62 (32%), Gaps = 2/62 (3%) Frame = -3 Query: 273 AEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIPTRAR 100 A PG P G G P+ T G GP + G PG G G+ Sbjct: 312 AGAPGFPGPRGGPGPQGPQGSTGARGLGGDPGPSGQKGDSGAKGEPGHSGVQGAAGPAGE 371 Query: 99 RG 94 G Sbjct: 372 EG 373 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/39 (35%), Positives = 16/39 (41%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGP 175 R PA PG GS G+ PR + P G GP Sbjct: 708 RGEGGPAGLPGFAGPPGSDGQSGPRGEKGPAGGKGDVGP 746 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 8/56 (14%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--------PGFRGTDGS 118 G + G G + +T H A GS GP +R G G RG DGS Sbjct: 178 GLDGRKGESGTAGAKGETGAHGANGSPGPAGSRGLNGERGRAGPAGPAGARGADGS 233
>SOX14_DROME (P40656) Putative transcription factor SOX-14| Length = 472 Score = 32.3 bits (72), Expect = 0.31 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSART 160 +PSP P S +PA+ PG P A P A + P++ +T Sbjct: 57 SPSPSPASSPSPAPAQTPGAQKTQSQAAITHPAAVASPSAPVAAAAPKTPKT 108
>SFTPD_RAT (P35248) Pulmonary surfactant-associated protein D precursor (SP-D)| (PSP-D) (CP4) Length = 374 Score = 32.0 bits (71), Expect = 0.40 Identities = 23/62 (37%), Positives = 26/62 (41%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGT 127 P P E +P E G P G+ G P P A GS GP + RG PG RG Sbjct: 160 PAGPKGERGAPGE-QGAPGNAGAAG---PAGPAGPQGAPGSRGPPGLKGDRG-APGDRGI 214 Query: 126 DG 121 G Sbjct: 215 KG 216 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 9/68 (13%) Frame = -3 Query: 297 PHRESSSPAEGP-------GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-- 145 P R+ EGP G P G G PR P GS G + RGL+ Sbjct: 47 PGRDGRDGREGPRGEKGDPGLPGPMGLSGLPGPRGPVGPKGENGSAGEPGPKGERGLVGP 106 Query: 144 PGFRGTDG 121 PG G G Sbjct: 107 PGSPGISG 114 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGS 118 PG+P +G G++ P + G GP+ +G + PG +G+ G+ Sbjct: 107 PGSPGISGPAGKEGPSGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGSAGA 157
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 32.0 bits (71), Expect = 0.40 Identities = 24/71 (33%), Positives = 30/71 (42%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGT 127 P P E SP PGNP G G + +T P GP+ RRG PG +G+ Sbjct: 383 PPGPPGEKGSPGI-PGNPGAQGPGGTKGRKGETGP------PGPKGEPGRRG-DPGTKGS 434 Query: 126 DGSIPTRARRG 94 G + RG Sbjct: 435 KGGPGAKGERG 445 Score = 27.3 bits (59), Expect = 9.9 Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 1/70 (1%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-LPGFRGTD 124 P R + PGN G G PR AG GP+ R R G PG RG Sbjct: 471 PGPRGPTGAVGEPGNIGSRGDPGDLGPRGD------AGPPGPKGDRGRPGFSYPGPRGPQ 524 Query: 123 GSIPTRARRG 94 G + + G Sbjct: 525 GDKGEKGQPG 534
>COL7_CAEEL (P18832) Cuticle collagen 7 precursor| Length = 316 Score = 32.0 bits (71), Expect = 0.40 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 7/71 (9%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG-----PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSA--RTRR 154 P P P + SP + PG+P K+G GR P P A G GP A + Sbjct: 171 PGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLP----GPSGAPGPQGPPGAPGQPGS 226 Query: 153 GLLPGFRGTDG 121 G PG G G Sbjct: 227 GNAPGPAGPPG 237 Score = 28.5 bits (62), Expect = 4.4 Identities = 22/71 (30%), Positives = 26/71 (36%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P+ P P PG PA+ G G P P +AGS G A PG Sbjct: 143 PAGVPGQPGPKGPNGNPGAPAQGGGQG---PPGPPGPAGSAGSPGQAGA-------PGNP 192 Query: 132 GTDGSIPTRAR 100 G+ G R R Sbjct: 193 GSPGKSGQRGR 203
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 32.0 bits (71), Expect = 0.40 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIPTRARRG 94 PG+P G+ G+ P G GP R + G++ PG +G DG+ RG Sbjct: 538 PGSPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERG 596 Score = 30.4 bits (67), Expect = 1.2 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG KNG G P T P G +GP + +G +PG G G Sbjct: 604 PGPAGKNGETGPQGPPGPTGPAGDKGDSGPPGPQGLQG-IPGTGGPPG 650 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 1/72 (1%) Frame = -3 Query: 306 PYPPHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 P P GP G P KNG+ G R + + G GP+ + G PG G Sbjct: 415 PGPAGTNGIPGTRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDG-SPGEPG 473 Query: 129 TDGSIPTRARRG 94 +G RG Sbjct: 474 ANGLPGAAGERG 485 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/60 (30%), Positives = 23/60 (38%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 P H P G G G P P A G+ GP+ R +G G RG++G Sbjct: 1045 PGHPGPPGPVGPSGKSGDRGETGPAGPSGAPGPAGARGAPGPQGPRGDKG-ETGERGSNG 1103 Score = 28.5 bits (62), Expect = 4.4 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRD----QPRAQTKPHAAAGSTGPRSARTRRGL--LPG 139 P R A PG P G G+D +P A P AAG GP R G +PG Sbjct: 442 PGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLP-GAAGERGPSGFRGPAGPNGIPG 500 Query: 138 FRGTDG 121 +G G Sbjct: 501 EKGPPG 506 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARRG 94 PG +G G+D PR P G G + G LPG G G R G Sbjct: 745 PGGAGADGVPGKDGPRGPAGPIGPPGPAGQPGDKGEGGSPGLPGIAGPRGGPGERGEHG 803 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -3 Query: 267 GPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 GPG P G G++ +T P G TGP + G PG +G G Sbjct: 597 GPGGPGLPGPAGKN---GETGPQGPPGPTGPAGDKGDSG-PPGPQGLQG 641 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/67 (26%), Positives = 22/67 (32%) Frame = -3 Query: 294 HRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSI 115 H + P PGN G G P G+ GP G +PG RG G Sbjct: 375 HAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLIGARGPPGPAGTNG-IPGTRGPSGEP 433 Query: 114 PTRARRG 94 +G Sbjct: 434 GKNGAKG 440
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 32.0 bits (71), Expect = 0.40 Identities = 22/65 (33%), Positives = 27/65 (41%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P P ES + E PG+ G G + P+ AGS GP RG PG R Sbjct: 348 PGPAGSKGESGNKGE-PGSAGAQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRG-SPGSR 405 Query: 132 GTDGS 118 G G+ Sbjct: 406 GLPGA 410 Score = 31.6 bits (70), Expect = 0.52 Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 2/66 (3%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPG 139 P+ P + PA G P G G D + G GP+ AR G LPG Sbjct: 116 PAGEPGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPG 175 Query: 138 FRGTDG 121 F+G G Sbjct: 176 FKGIRG 181 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 3/72 (4%) Frame = -3 Query: 300 PPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRG 130 PP S + G PG G +G PR T P G G GL+ GF G Sbjct: 395 PPGLRGSPGSRGLPGADGPAGVMGPPGPRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPG 454 Query: 129 TDGSIPTRARRG 94 G++ + G Sbjct: 455 APGNVGPAGKEG 466 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/44 (31%), Positives = 19/44 (43%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 + PA G P + G +G P P AAG G + R +G Sbjct: 702 AGPAGPRGTPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKG 745 Score = 28.5 bits (62), Expect = 4.4 Identities = 23/64 (35%), Positives = 25/64 (39%) Frame = -3 Query: 285 SSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTR 106 S+ P+ G P GS G P T AAG TGP G PG G G R Sbjct: 761 SAGPSGPNGPPGPAGSRGDGGPPGATGFPGAAGRTGPPGPSGITG-PPGPPGAAGKEGLR 819 Query: 105 ARRG 94 RG Sbjct: 820 GPRG 823 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSI 115 PG P +NG+ G+ R G+ GP G RG+DGS+ Sbjct: 201 PGAPGENGTPGQTGARGLPGERGRVGAPGP----------AGARGSDGSV 240 Score = 28.1 bits (61), Expect = 5.8 Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 15/85 (17%) Frame = -3 Query: 300 PPHRESSSPAEG----PGNPAKNGSLGRDQPRAQTKPHAA---------AGSTGPRSART 160 PP R+ + +G PGN G++G P P AGS GP A Sbjct: 935 PPGRDGQAGHKGERGYPGNIGPVGAVGAPGPHGPVGPTGKHGNRGEPGPAGSVGPVGAVG 994 Query: 159 RRGLL--PGFRGTDGSIPTRARRGL 91 RG G RG G + RGL Sbjct: 995 PRGPSGPQGIRGDKGEPGEKGPRGL 1019 Score = 27.3 bits (59), Expect = 9.9 Identities = 19/59 (32%), Positives = 21/59 (35%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTR 106 S P PGNP NG G A G GPR +PG G G+ R Sbjct: 291 SGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRG-------IPGPVGAAGATGAR 342
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 32.0 bits (71), Expect = 0.40 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 1/65 (1%) Frame = -3 Query: 306 PYPPHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 P PP + +GP G P G+ G D P G GP +G+ P + Sbjct: 224 PGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPKYCA 283 Query: 129 TDGSI 115 DG + Sbjct: 284 LDGGV 288 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/70 (30%), Positives = 25/70 (35%), Gaps = 6/70 (8%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG--PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPR----SARTRRG 151 P P P P E PG P + + G PR P AG+ GP + Sbjct: 150 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEP 209 Query: 150 LLPGFRGTDG 121 L PG G G Sbjct: 210 LTPGAPGEPG 219
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 32.0 bits (71), Expect = 0.40 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIPTRARRG 94 PG+P G+ G+ P G GP R + G++ PG +G DG+ RG Sbjct: 538 PGSPGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERG 596 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/60 (31%), Positives = 23/60 (38%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 P R A PG P G G+D + + G+ G R A PGFRG G Sbjct: 442 PGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGVPGNPGERGA-------PGFRGPAG 494 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 1/72 (1%) Frame = -3 Query: 306 PYPPHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 P P + GP G P KNG+ G R + + G GP+ + G PG G Sbjct: 415 PGPAGANGAPGQRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDG-SPGEPG 473 Query: 129 TDGSIPTRARRG 94 +G RG Sbjct: 474 ANGVPGNPGERG 485 Score = 29.3 bits (64), Expect = 2.6 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGPGNPA-KNGSLGRDQPRAQTK---PHAAAGSTGPRSARTRRGL 148 N SP P GP P+ KNG G P + P A G+ GP+ R +G Sbjct: 1036 NGSPGAPGAPGHPGPPGPVGPSGKNGDRGETGPAGPSGAPGPAGARGAPGPQGPRGDKG- 1094 Query: 147 LPGFRGTDG 121 G RG++G Sbjct: 1095 ETGERGSNG 1103 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARRG 94 PG +G G+D PR P G G + G LPG G G R G Sbjct: 745 PGGAGADGVPGKDGPRGPAGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGGPGERGEHG 803 Score = 27.7 bits (60), Expect = 7.6 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 6/68 (8%) Frame = -3 Query: 306 PYPPHRESSSPAEG-PGNPAKN---GSLGRDQPRAQTKPHAAAGSTGP--RSARTRRGLL 145 P PP SS G PG+P G G+ P P A G +GP + + R Sbjct: 178 PGPPGPPGSSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGR 237 Query: 144 PGFRGTDG 121 PG RG G Sbjct: 238 PGERGLPG 245 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/48 (33%), Positives = 19/48 (39%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG KNG G P T G GP + +G +PG G G Sbjct: 604 PGPAGKNGETGPQGPPGPTGAPGDKGDAGPPGPQGLQG-IPGTSGPPG 650
>LGE1_ASHGO (Q75A59) Transcriptional regulatory protein LGE1| Length = 244 Score = 32.0 bits (71), Expect = 0.40 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAK----NGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL 145 P P PP SS+P G A+ NG+ QP +Q A GS G R R Sbjct: 20 PPPPPPPSHSSAPPSSQGGSARAAPLNGAFHSHQPHSQGYAR-AEGSNGYRQPYGR---- 74 Query: 144 PGFRGTDG 121 G+RG+ G Sbjct: 75 GGYRGSGG 82
>TONB_PSEAE (Q51368) Protein tonB| Length = 342 Score = 32.0 bits (71), Expect = 0.40 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTG 178 P P P SS P+ P ++G+ P AQT P + G G Sbjct: 199 PEPEPSTEASSQPSPSSAAPPPAPTVGQSTPGAQTAPSGSQGPAG 243
>CO9A1_RAT (P20850) Collagen alpha-1(IX) chain (Fragment)| Length = 325 Score = 32.0 bits (71), Expect = 0.40 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPT 109 P GNP + G G + R G GPR + +G LPG +G G PT Sbjct: 105 PKGSVGNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPT 162
>CL46_BOVIN (Q8MHZ9) Collectin-46 precursor (CL-46) (46 kDa collectin)| Length = 371 Score = 31.6 bits (70), Expect = 0.52 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIPTRARRG 94 PG P G GR+ P + G+ GP+ +G + PG +G+ G + RG Sbjct: 105 PGPPGMPGPAGREGPSGKQGSMGPPGTPGPKGDTGPKGGMGAPGMQGSPGPAGLKGERG 163 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%) Frame = -3 Query: 309 SPYPPHRESSSPAEGPGNP-AKNGSLGRDQPRAQTKPHAAAGSTGP 175 SP P R GP P NGS G P+ T P G GP Sbjct: 68 SPGPAGRAGRPGPAGPIGPKGDNGSAGEPGPKGDTGPPGPPGMPGP 113 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG GS G P P +G+ GP + RG PG RG G Sbjct: 165 PGELGAPGSAGVAGPAGAIGPQGPSGARGPPGLKGDRG-DPGERGAKG 211
>ZN446_HUMAN (Q9NWS9) Zinc finger protein 446| Length = 450 Score = 31.6 bits (70), Expect = 0.52 Identities = 18/53 (33%), Positives = 21/53 (39%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTR 157 N S PP + P +GPG A G G P +P T P A TR Sbjct: 269 NESEGPPGCPEAQPPQGPGPAAWEGLSGAATPAPTVRPGTPPVPTQPTPAETR 321
>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) (Fragment) Length = 1048 Score = 31.6 bits (70), Expect = 0.52 Identities = 19/61 (31%), Positives = 20/61 (32%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P P PPH P GPG A PH G P R G +PG Sbjct: 771 PRPMPPHMMHRGPPPGPGG------------FAMPPPHGMKGPFPPHGPFVRPGGMPGLG 818 Query: 132 G 130 G Sbjct: 819 G 819
>POLS_RUBVM (P08563) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 992 Score = 31.6 bits (70), Expect = 0.52 Identities = 22/74 (29%), Positives = 26/74 (35%) Frame = -3 Query: 309 SPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 S P + S +P + P P G PR + P T P A RGL P Sbjct: 88 SQTPAPKPSRAPPQQPQPPRMQTGRGGSAPRPELGP-----PTNPFQAAVARGLRPPLHD 142 Query: 129 TDGSIPTRARRGLW 88 D PT A W Sbjct: 143 PDTEAPTEACVTSW 156
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 31.6 bits (70), Expect = 0.52 Identities = 22/65 (33%), Positives = 27/65 (41%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P P ES + E PG+ G G + P+ AGS GP RG PG R Sbjct: 348 PGPAGSKGESGNKGE-PGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRG-SPGSR 405 Query: 132 GTDGS 118 G G+ Sbjct: 406 GLPGA 410 Score = 30.4 bits (67), Expect = 1.2 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 12/61 (19%) Frame = -3 Query: 267 GPGNPA-KNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG-----------LLPGFRGTD 124 GP PA K+G+ G P P A G GP + RG LPGF+G + Sbjct: 967 GPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGFKGHN 1026 Query: 123 G 121 G Sbjct: 1027 G 1027 Score = 29.6 bits (65), Expect = 2.0 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 9/81 (11%) Frame = -3 Query: 306 PYPPHRESSSPAEGP-------GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL 148 P PP GP G + G++G + P AG+ GP +GL Sbjct: 807 PGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGL 866 Query: 147 L--PGFRGTDGSIPTRARRGL 91 L PG G GS R RGL Sbjct: 867 LGAPGILGLPGS---RGERGL 884 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFR 133 P P + + A GP P G G D + G GP+ AR G LPGF+ Sbjct: 120 PGEPGQTGPAGARGPAGPP--GKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFK 177 Query: 132 GTDG 121 G G Sbjct: 178 GIRG 181 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 + PA G+P + G +G P P AAG G + R +G Sbjct: 702 AGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGGKG 745 Score = 28.5 bits (62), Expect = 4.4 Identities = 23/64 (35%), Positives = 25/64 (39%) Frame = -3 Query: 285 SSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTR 106 ++ PA G P GS G P T AAG TGP G PG G G R Sbjct: 761 AAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISG-PPGPPGPAGKEGLR 819 Query: 105 ARRG 94 RG Sbjct: 820 GPRG 823 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSI 115 PG P +NG+ G+ R G+ GP G RG+DGS+ Sbjct: 201 PGAPGENGTPGQTGARGLPGERGRVGAPGP----------AGARGSDGSV 240 Score = 28.1 bits (61), Expect = 5.8 Identities = 23/74 (31%), Positives = 26/74 (35%), Gaps = 11/74 (14%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPR---------SARTRRGLL--PGF 136 S P PGNP NG G A G GPR A RGL+ PG Sbjct: 291 SGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGP 350 Query: 135 RGTDGSIPTRARRG 94 G+ G + G Sbjct: 351 AGSKGESGNKGEPG 364
>MILK1_MOUSE (Q8BGT6) Molecule interacting with Rab13 (MIRab13) (MICAL-like| protein 1) Length = 870 Score = 31.6 bits (70), Expect = 0.52 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTK---PHAAAGSTGPRSARTRRGLLPG 139 P PP S+SPA PG A+ L D Q K P +A + G R +R L G Sbjct: 124 PAPPSPTSTSPAVQPGEEAQGDDLSPDSLSEQGKQQPPSSACAACGQRVHLVQRYLAEG 182 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/72 (27%), Positives = 26/72 (36%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P PY P E P P + SL P P + + P A T + L P + Sbjct: 417 PKPYNPFEEEEEEEGEPAPPVPSPSLAPPVPSPSPAPPVPSPAPAPSEA-TPKSLHPWYG 475 Query: 132 GTDGSIPTRARR 97 T S P +R Sbjct: 476 ITPTSSPKTKKR 487
>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1516 Score = 31.6 bits (70), Expect = 0.52 Identities = 18/61 (29%), Positives = 25/61 (40%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARR 97 P PG P ++G+ GRD G TGP+ GF GT G + + + Sbjct: 568 PQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQ----------GFPGTPGDVGPKGDK 617 Query: 96 G 94 G Sbjct: 618 G 618
>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 1063 Score = 31.6 bits (70), Expect = 0.52 Identities = 22/74 (29%), Positives = 26/74 (35%) Frame = -3 Query: 309 SPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 S P + S +P + P P G PR + P T P A RGL P Sbjct: 89 SQTPAPKPSRAPPQQPQPPRMQTGRGGSAPRPELGP-----PTNPFQAAVARGLRPPLHD 143 Query: 129 TDGSIPTRARRGLW 88 D PT A W Sbjct: 144 PDTEAPTEACVTSW 157
>POLS_RUBVR (P19725) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 1063 Score = 31.6 bits (70), Expect = 0.52 Identities = 22/74 (29%), Positives = 26/74 (35%) Frame = -3 Query: 309 SPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 S P + S +P + P P G PR + P T P A RGL P Sbjct: 89 SQTPAPKPSRAPPQQPQPPRMQTGRGGSAPRPELGP-----PTNPFQAAVARGLRPPLHD 143 Query: 129 TDGSIPTRARRGLW 88 D PT A W Sbjct: 144 PDTEAPTEACVTSW 157
>POLS_RUBVH (P21480) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 1063 Score = 31.6 bits (70), Expect = 0.52 Identities = 22/74 (29%), Positives = 26/74 (35%) Frame = -3 Query: 309 SPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 S P + S +P + P P G PR + P T P A RGL P Sbjct: 89 SQTPAPKPSRAPPQQPQPPRMQTGRGGSAPRPELGP-----PTNPFQAAVARGLRPPLHD 143 Query: 129 TDGSIPTRARRGLW 88 D PT A W Sbjct: 144 PDTEAPTEACVTSW 157
>SFTPD_BOVIN (P35246) Pulmonary surfactant-associated protein D precursor (SP-D)| (PSP-D) Length = 369 Score = 31.6 bits (70), Expect = 0.52 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG P G G P P +G+ GP + RG PG RG G Sbjct: 165 PGEPGAPGRAGAPGPAGAIGPQGPSGARGPPGLKGDRG-TPGERGAKG 211 Score = 31.2 bits (69), Expect = 0.69 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIPTRARRG 94 PG P G GR+ P + G+ GP+ +G + PG +G+ G + RG Sbjct: 105 PGPPGMPGPAGREGPSGKQGSMGPPGTPGPKGDTGPKGGVGAPGIQGSPGPAGLKGERG 163 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%) Frame = -3 Query: 309 SPYPPHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGP 175 SP P R GP G NGS G P+ T P G GP Sbjct: 68 SPGPAGRAGMPGPAGPIGLKGDNGSAGEPGPKGDTGPPGPPGMPGP 113
>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) Length = 1147 Score = 31.6 bits (70), Expect = 0.52 Identities = 19/61 (31%), Positives = 20/61 (32%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P P PPH P GPG A PH G P R G +PG Sbjct: 878 PRPMPPHMMHRGPPPGPGG------------FAMPPPHGMKGPFPPHGPFVRPGGMPGLG 925 Query: 132 G 130 G Sbjct: 926 G 926
>EMIL2_HUMAN (Q9BXX0) EMILIN-2 precursor (Elastin microfibril interface-located| protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10) Length = 1053 Score = 31.6 bits (70), Expect = 0.52 Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 18/83 (21%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGN-------------PAKNGSLGRDQPRAQTKPHAAAGSTG-- 178 P P PP + AE PG P GS G Q P A AG +G Sbjct: 804 PEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRG 863 Query: 177 -PR--SARTRRGLLPGFRGTDGS 118 PR +T G +PG G G+ Sbjct: 864 LPRGVDGQTGSGTVPGAEGFAGA 886
>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)| Length = 3124 Score = 31.6 bits (70), Expect = 0.52 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Frame = -3 Query: 306 PYPPHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 P PP A+GP G GS G PR +T P G GP+ + +PG G Sbjct: 2753 PGPPGPPGGPGAKGPRGERGLTGSSGPPGPRGETGPPGPQGPPGPQGPNGLQ--IPGEPG 2810 Query: 129 TDGSIPTRARRGL 91 G + GL Sbjct: 2811 RQGMKGDAGQPGL 2823
>EPN1_RAT (O88339) Epsin-1 (EPS-15-interacting protein 1)| Length = 575 Score = 26.6 bits (57), Expect(2) = 0.60 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 5/37 (13%) Frame = -1 Query: 308 PPTLPTGNLVA-----PRRDPGIQLKMDPWGGTNPEP 213 P ++PT VA P P + DPWGG P P Sbjct: 279 PASVPTAVPVAAAASDPWGAPAVPPAADPWGGAAPTP 315 Score = 23.5 bits (49), Expect(2) = 0.60 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = -2 Query: 235 GEGPTQSPNQTPRGGRIDGAPVSAD 161 GEGPT P + GG P S+D Sbjct: 343 GEGPTSDPWGSADGGAPVSGPPSSD 367
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 31.2 bits (69), Expect = 0.69 Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 4/77 (5%) Frame = -3 Query: 312 PSPYPPHRESSSPAE--GPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--L 145 P P E P E PG G G P AAG GP A+ GL + Sbjct: 624 PGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGM 683 Query: 144 PGFRGTDGSIPTRARRG 94 PG RG G + RG Sbjct: 684 PGERGAAGIAGPKGDRG 700 Score = 30.8 bits (68), Expect = 0.89 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Frame = -3 Query: 300 PPHRESSSPAEGP----GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 PP + ++ GP G P G G P+ +T P G+ GP +RG G Sbjct: 371 PPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRG-ARGEP 429 Query: 132 GTDGSIPTRARRG 94 G G I RG Sbjct: 430 GGAGPIGPPGERG 442 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/58 (32%), Positives = 23/58 (39%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRGL 91 PG+P G G+ R + G +GP AR G G RG G RGL Sbjct: 1005 PGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIAG-PQGPRGDKGEAGEPGERGL 1061 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-- 145 N P P A G G P G G+ P G GP+ AR + G++ Sbjct: 477 NGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGF 536 Query: 144 PGFRGTDGSIPTRARRGL 91 PG +G +G +GL Sbjct: 537 PGPKGANGEPGKAGEKGL 554 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Frame = -3 Query: 267 GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARR 97 GP G P K G+ G R P G TGP R G G G DG+ + R Sbjct: 931 GPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDR 990 Query: 96 G 94 G Sbjct: 991 G 991 Score = 28.9 bits (63), Expect = 3.4 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%) Frame = -3 Query: 315 NPSPYPPHRESSSP-------AEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSART 160 NP P S +P A+G G P G+ G PR P A G GP+ Sbjct: 329 NPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTG 388 Query: 159 RRGLLPGFRGTDG 121 G + GF+G G Sbjct: 389 EPG-IAGFKGEQG 400 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Frame = -3 Query: 297 PHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGT 127 P R +GP G P + G G D P P GP+ +RG+ LPG RG Sbjct: 870 PGRAGDPGLQGPAGAPGEKGEPGDDGPSGSDGP------PGPQGLAGQRGIVGLPGQRGE 923 Query: 126 DG 121 G Sbjct: 924 RG 925
>SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)| Length = 579 Score = 31.2 bits (69), Expect = 0.69 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPR--AQTKPHAAAGSTGPRS 169 PSP P + PA+ PG LG+ QPR Q P A PRS Sbjct: 403 PSPLRPWGPQTKPAKSPGQGQLGPLLGQPQPRPPPQGGPRQAQSPQPPRS 452
>CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor| Length = 3137 Score = 31.2 bits (69), Expect = 0.69 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 10/67 (14%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHA--AAGSTGPRSARTRRGLL--------PGFRGTDGSI 115 PGNP G G+ PR + G GP+ + RG + PG RG G Sbjct: 2280 PGNPGPRGPNGQQGPRGEMGDDGRDGIGGPGPKGRKGERGFVGYPGPKGGPGDRGGAGGP 2339 Query: 114 PTRARRG 94 + RG Sbjct: 2340 GPKGNRG 2346 Score = 30.8 bits (68), Expect = 0.89 Identities = 26/90 (28%), Positives = 32/90 (35%), Gaps = 15/90 (16%) Frame = -3 Query: 315 NPSPYPPHRESSSPAE----------GPGNPAKNGS---LGRDQPRAQTKPHAAAGSTGP 175 NP P P+ + E GPG + G +G P+ AG GP Sbjct: 2282 NPGPRGPNGQQGPRGEMGDDGRDGIGGPGPKGRKGERGFVGYPGPKGGPGDRGGAGGPGP 2341 Query: 174 RSARTRRGLL--PGFRGTDGSIPTRARRGL 91 + R RRG PG G G I GL Sbjct: 2342 KGNRGRRGNAGNPGTPGQKGEIGYPGPSGL 2371
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 31.2 bits (69), Expect = 0.69 Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 4/77 (5%) Frame = -3 Query: 312 PSPYPPHRESSSPAE--GPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--L 145 P P E P E PG G G P AAG GP A+ GL + Sbjct: 664 PGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGM 723 Query: 144 PGFRGTDGSIPTRARRG 94 PG RG G + RG Sbjct: 724 PGERGAAGIAGPKGDRG 740 Score = 30.8 bits (68), Expect = 0.89 Identities = 19/58 (32%), Positives = 24/58 (41%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRGL 91 PG+P G G+ R + G +GP AR G G RG G + RGL Sbjct: 1045 PGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIAG-PQGPRGDKGESGEQGERGL 1101 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Frame = -3 Query: 300 PPHRESSSPAEGP----GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 PP + ++ GP G P G G P+ +T P G+ GP +RG G Sbjct: 411 PPGPQGATGPLGPKGQAGEPGIAGFKGDQGPKGETGPAGPQGAPGPAGEEGKRG-ARGEP 469 Query: 132 GTDGSIPTRARRG 94 G G I RG Sbjct: 470 GGAGPIGPPGERG 482 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-- 145 N P P A G G P G G+ P G GP+ AR + G++ Sbjct: 517 NGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGF 576 Query: 144 PGFRGTDGSIPTRARRGL 91 PG +G +G +GL Sbjct: 577 PGPKGANGEPGKAGEKGL 594 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Frame = -3 Query: 267 GP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARR 97 GP G P K G+ G R P G TGP R G G G DG+ + R Sbjct: 971 GPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDR 1030 Query: 96 G 94 G Sbjct: 1031 G 1031 Score = 28.9 bits (63), Expect = 3.4 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%) Frame = -3 Query: 315 NPSPYPPHRESSSP-------AEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSART 160 NP P S +P A+G G P G+ G PR P A G GP+ Sbjct: 369 NPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAG 428 Query: 159 RRGLLPGFRGTDG 121 G + GF+G G Sbjct: 429 EPG-IAGFKGDQG 440
>CN032_MOUSE (Q8BH93) Protein C14orf32 homolog| Length = 242 Score = 31.2 bits (69), Expect = 0.69 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQ-PR---AQTKPHAAAGSTGPRSARTRRGLL 145 P P P+ + P GP P ++ + PR A T P AAAGS GP + Sbjct: 97 PPPGVPYPAPAVPGPGPTGPYATPNMPMPELPRPYGAPTDP-AAAGSLGPWGPMSSGPWA 155 Query: 144 PGFRGTDGSIPTRA 103 PG G ++P R+ Sbjct: 156 PGIAGQHPNMPYRS 169
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 31.2 bits (69), Expect = 0.69 Identities = 20/56 (35%), Positives = 26/56 (46%) Frame = -3 Query: 309 SPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 +P R S A PG P S+ QP A +P + G T RS+ TR L+P Sbjct: 2192 TPVTNQRHSDPYAHPPGTPRPGISVPYSQPPATPRPRISEGFT--RSSMTRPVLMP 2245
>COEC_SCYCA (P81130) Egg case collagen (Fragments)| Length = 209 Score = 31.2 bits (69), Expect = 0.69 Identities = 21/73 (28%), Positives = 26/73 (35%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P+ YP + P GPG+P G G P G G G PG + Sbjct: 131 PAGYPGTPGTPGPRGGPGDPGMPGEPGVGFP-------GVPGFPGSNGRNGMNGGYPGPK 183 Query: 132 GTDGSIPTRARRG 94 G DG I +G Sbjct: 184 GEDGDIGPMGGKG 196
>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21| Length = 348 Score = 31.2 bits (69), Expect = 0.69 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 9/57 (15%) Frame = -3 Query: 312 PSPYPPHR---------ESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRS 169 P P+PP R SSSP+ P A++ S +D + HA+ S PR+ Sbjct: 191 PPPHPPARCSSTHSQSTSSSSPSSPPRKRARSRSASQDSSARSSSSHASPRSPTPRT 247
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 31.2 bits (69), Expect = 0.69 Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 6/77 (7%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLG------RDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 YP + PG P +G G + PR + P G GPR A + G Sbjct: 803 YPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSG-AK 861 Query: 141 GFRGTDGSIPTRARRGL 91 G G DG RGL Sbjct: 862 GTSGGDGPHGPPGERGL 878 Score = 29.6 bits (65), Expect = 2.0 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 8/65 (12%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSAR---TRRGLL-----PGF 136 R S P PG G+ G++ + P A G GP R RGL PG Sbjct: 942 RGHSGPPGPPGEQGLPGTSGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGL 1001 Query: 135 RGTDG 121 +G +G Sbjct: 1002 KGNEG 1006 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 2/63 (3%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRG 130 +P R A GPG G G P AAGS GP R G PG G Sbjct: 986 FPGERGLPGTAGGPGLKGNEGPAGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAG 1045 Query: 129 TDG 121 G Sbjct: 1046 EKG 1048 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDG 121 PG+P K G G + + P G GPR + G+ L G +G G Sbjct: 690 PGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKG 739 Score = 28.5 bits (62), Expect = 4.4 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 7/75 (9%) Frame = -3 Query: 297 PH--RESSSPAEGPGNPAKNGSLGRDQ---PRAQTKPHAAAGSTGPRSARTRRGL--LPG 139 PH + S P PG P + G+ G P+ PH G+ G G LPG Sbjct: 632 PHGPKGSLGPQGEPGPPGQQGTPGAQGLPGPQGAIGPHGEKGARGKPGLPGMPGSDGLPG 691 Query: 138 FRGTDGSIPTRARRG 94 G +G T+ +G Sbjct: 692 HPGKEGPPGTKGNQG 706 Score = 28.1 bits (61), Expect = 5.8 Identities = 21/63 (33%), Positives = 24/63 (38%), Gaps = 2/63 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRA 103 P PG+P G G P+ P G TGP RRG G RG G + Sbjct: 500 PLGQPGSPGLKGESGDLGPQG---PRGPQGLTGPPGKAGRRGRAGADGARGMPGEPGMKG 556 Query: 102 RRG 94 RG Sbjct: 557 DRG 559
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 31.2 bits (69), Expect = 0.69 Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 6/77 (7%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLG------RDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 YP + PG P +G G + PR + P G GPR A + G Sbjct: 803 YPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSG-AK 861 Query: 141 GFRGTDGSIPTRARRGL 91 G G DG RGL Sbjct: 862 GTSGGDGPHGPPGERGL 878 Score = 30.8 bits (68), Expect = 0.89 Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 6/77 (7%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQ------PRAQTKPHAAAGSTGPRSARTRRGLL 145 P PP ++ PG+P + G +G P P AAG TGP R G Sbjct: 894 PGPPGKDGL-----PGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPG-P 947 Query: 144 PGFRGTDGSIPTRARRG 94 PG G G T + G Sbjct: 948 PGPPGEQGLPGTAGKEG 964 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDG 121 PG+P K G G + + P G GPR + G+ L G +G G Sbjct: 690 PGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKG 739 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 2/63 (3%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRG 130 +P R A GPG G G P AAGS GP R G PG G Sbjct: 986 FPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAG 1045 Query: 129 TDG 121 G Sbjct: 1046 EKG 1048 Score = 28.1 bits (61), Expect = 5.8 Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 8/65 (12%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSAR---TRRGLL-----PGF 136 R P PG G+ G++ + P A G GP R RGL PG Sbjct: 942 RGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGL 1001 Query: 135 RGTDG 121 +G +G Sbjct: 1002 KGNEG 1006
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 31.2 bits (69), Expect = 0.69 Identities = 26/80 (32%), Positives = 30/80 (37%), Gaps = 17/80 (21%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQ---------------PRAQTKPHAAAGSTGPRSARTRRGL 148 S P PGNP NG G PR P AAG+TGP RGL Sbjct: 297 SGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGP------RGL 350 Query: 147 L--PGFRGTDGSIPTRARRG 94 + PG G+ G + G Sbjct: 351 VGEPGPAGSKGETGNKGEPG 370 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 14/76 (18%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKP---HAAAGSTGPRSARTRRGL-----------LPG 139 P+ PG P + G G R P + A G GP+ + +G LPG Sbjct: 506 PSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPG 565 Query: 138 FRGTDGSIPTRARRGL 91 GT G + RGL Sbjct: 566 PSGTAGEVGKPGERGL 581 Score = 28.5 bits (62), Expect = 4.4 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFR 133 P P + + + GP P G G D + G GP+ AR G LPGF+ Sbjct: 126 PGEPGQTGPAGSRGPAGPP--GKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFK 183 Query: 132 GTDG 121 G G Sbjct: 184 GIRG 187 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSI 115 PG P +NG+ G+ R G+ GP G RG+DGS+ Sbjct: 207 PGAPGENGTPGQAGARGLPGERGRVGAPGP----------AGARGSDGSV 246 Score = 27.7 bits (60), Expect = 7.6 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 6/77 (7%) Frame = -3 Query: 303 YPPHRESSSPAEGPG-----NPA-KNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 YP + + A PG PA K+G+ G P P A G GP + Sbjct: 956 YPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQ------- 1008 Query: 141 GFRGTDGSIPTRARRGL 91 G RG G + RGL Sbjct: 1009 GIRGDKGEPGDKGARGL 1025 Score = 27.7 bits (60), Expect = 7.6 Identities = 22/64 (34%), Positives = 25/64 (39%) Frame = -3 Query: 285 SSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTR 106 ++ P+ G P GS G P T AAG TGP G PG G G R Sbjct: 767 AAGPSGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGITG-PPGPPGAAGKEGIR 825 Query: 105 ARRG 94 RG Sbjct: 826 GPRG 829
>SFTPD_MOUSE (P50404) Pulmonary surfactant-associated protein D precursor (SP-D)| (PSP-D) Length = 374 Score = 30.8 bits (68), Expect = 0.89 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG G+ G P P A GS GP + RG +PG RG G Sbjct: 170 PGVQGAPGNAGAAGPAGPAGPQGAPGSRGPPGLKGDRG-VPGDRGIKG 216 Score = 28.5 bits (62), Expect = 4.4 Identities = 23/80 (28%), Positives = 27/80 (33%), Gaps = 12/80 (15%) Frame = -3 Query: 297 PHRESSSPAEGP-------GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--- 148 P R+ EGP G P G G P P GS G + RGL Sbjct: 47 PGRDGRDGREGPRGEKGDPGLPGPMGLSGLQGPTGPVGPKGENGSAGEPGPKGERGLSGP 106 Query: 147 --LPGFRGTDGSIPTRARRG 94 LPG G G ++G Sbjct: 107 PGLPGIPGPAGKEGPSGKQG 126
>COJA1_HUMAN (Q14993) Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y)| chain) Length = 1142 Score = 30.8 bits (68), Expect = 0.89 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGT 127 P + + G G P K S+ R P G GP+ ++ RG +PG +G Sbjct: 704 PGLKSNKGEEGGAGEPGKYDSMARKGDIGPRGPPGIPGREGPKGSKGERGYPGIPGEKGD 763 Query: 126 DG 121 +G Sbjct: 764 EG 765
>SCAR3_MOUSE (Q8C850) Scavenger receptor class A member 3| Length = 606 Score = 30.8 bits (68), Expect = 0.89 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Frame = -3 Query: 273 AEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARR 97 + GP G+P G G P+ Q G GP R PG +G+ GS T R Sbjct: 479 SRGPKGDPGNLGPPGPQGPQGQPGEPGPVGERGPAGPRG----FPGLKGSKGSFGTGGPR 534 Query: 96 G 94 G Sbjct: 535 G 535 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 5/71 (7%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----LPGFRGT 127 R + P PG GS G PR Q P G GP G PG G Sbjct: 510 RGPAGPRGFPGLKGSKGSFGTGGPRGQPGPKGDVGPLGPEGPPGSPGPSGPQGKPGISGK 569 Query: 126 DGSIPTRARRG 94 GS R G Sbjct: 570 TGSPGQRGATG 580
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 30.8 bits (68), Expect = 0.89 Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 2/66 (3%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPG 139 P P + PA G P G G D + G GP+ AR G LPG Sbjct: 114 PPGEPGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPG 173 Query: 138 FRGTDG 121 F+G G Sbjct: 174 FKGIRG 179 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 + PA G+P + G +G P P AAG G + R +G Sbjct: 700 AGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKG 743 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAA---AGSTGPRSARTRRGLLPGFR 133 YP + A PG G +G+ R + P A AG+ GPR +G+ R Sbjct: 948 YPGNAGPVGAAGAPGPQGPVGPVGKHGNRGEPGPAGAVGPAGAVGPRGPSGPQGI----R 1003 Query: 132 GTDGSIPTRARRGL 91 G G + RGL Sbjct: 1004 GDKGEPGDKGPRGL 1017 Score = 28.9 bits (63), Expect = 3.4 Identities = 24/77 (31%), Positives = 27/77 (35%), Gaps = 4/77 (5%) Frame = -3 Query: 312 PSPYPPHRESSSPAE--GPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--L 145 P P ES + E G P G G + R T AG GP R G L Sbjct: 346 PGPAGSKGESGNKGEPGAVGQPGPPGPSGEEGKRGSTGEIGPAGPPGPPGLRGNPGSRGL 405 Query: 144 PGFRGTDGSIPTRARRG 94 PG G G + RG Sbjct: 406 PGADGRAGVMGPAGSRG 422 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSI 115 PG P +NG+ G+ R G+ GP G RG+DGS+ Sbjct: 199 PGAPGENGTPGQTGARGLPGERGRVGAPGP----------AGARGSDGSV 238 Score = 28.1 bits (61), Expect = 5.8 Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 10/78 (12%) Frame = -3 Query: 297 PHRESSSPAEG--------PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL- 145 P+ +S P E PG+P G G++ P G GP AR G + Sbjct: 432 PNGDSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIG 491 Query: 144 -PGFRGTDGSIPTRARRG 94 PG +G G +G Sbjct: 492 FPGPKGPSGDPGKAGEKG 509 Score = 27.7 bits (60), Expect = 7.6 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 11/67 (16%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG----------LLP-GFRGTDGSI 115 GNP G G D P + G+TGP R G + P GF G+ G+I Sbjct: 398 GNPGSRGLPGADGRAGVMGPAGSRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGNI 457 Query: 114 PTRARRG 94 + G Sbjct: 458 GPAGKEG 464 Score = 27.7 bits (60), Expect = 7.6 Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 17/80 (21%) Frame = -3 Query: 282 SSPAEGPGNPAKN---------------GSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL 148 S P PGNP N G+ G PR P AAG+TG RGL Sbjct: 289 SGPVGPPGNPGANGLPGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATG------ARGL 342 Query: 147 L--PGFRGTDGSIPTRARRG 94 + PG G+ G + G Sbjct: 343 VGEPGPAGSKGESGNKGEPG 362 Score = 27.3 bits (59), Expect = 9.9 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Frame = -3 Query: 297 PHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-----PGFR 133 P R+ + A PG G G + R + P AG GPR + RG + GF Sbjct: 667 PGRDGARGA--PGAIGAPGPAGANGDRGEAGPAGPAGPAGPRGSPGERGEVGPAGPNGFA 724 Query: 132 GTDGSIPTRARRG 94 G G+ +G Sbjct: 725 GPAGAAGQPGAKG 737
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 30.8 bits (68), Expect = 0.89 Identities = 21/65 (32%), Positives = 26/65 (40%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P P P PA P NGS G + Q + A + GP A + G PG Sbjct: 3820 PQPGPSTATGPQPAGPPRAEQTNGSKGTAKAPQQGRAPQAQPTPGPGPAGVKAGARPG-- 3877 Query: 132 GTDGS 118 GT G+ Sbjct: 3878 GTPGA 3882
>AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7.11.1)| Length = 799 Score = 30.8 bits (68), Expect = 0.89 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = +3 Query: 132 PGTPAVVPAASALTGAPSIRPPRGVWFGLWVGPSPRI 242 P PA VPA A GAP P R + +GP PR+ Sbjct: 340 PAPPAHVPAVPAPVGAPDGGPVRLPGAAVPIGPGPRV 376
>SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 (SNAPc subunit 4)| (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) (Proximal sequence element-binding transcription factor alpha subunit) (PSE-binding factor alpha Length = 1469 Score = 30.8 bits (68), Expect = 0.89 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPA---KNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 P+P P H S SPAE G+ A + R+ P +T HA P + G LP Sbjct: 1153 PAP-PTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHA----DPPEAEPPWSGRLP 1207 Query: 141 GFRGTDGSIPTRARRG 94 F G IP RG Sbjct: 1208 AFGGV---IPATEPRG 1220
>MARCO_MOUSE (Q60754) Macrophage receptor MARCO (Macrophage receptor with| collagenous structure) Length = 518 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 6/66 (9%) Frame = -3 Query: 300 PPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG-----LLPG 139 PP + + +G G P K G+ G PR + G TGP+ +G LPG Sbjct: 196 PPGSKGEAGLQGLTGAPGKQGATGAPGPRGEKGSKGDIGLTGPKGEHGTKGDKGDLGLPG 255 Query: 138 FRGTDG 121 +G G Sbjct: 256 NKGDMG 261
>COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor| Length = 3119 Score = 30.4 bits (67), Expect = 1.2 Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 7/69 (10%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAK------NGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL- 148 P PP PA GPG NG++G PR T P G GP+ GL Sbjct: 2754 PGPP-----GPAGGPGAKGPRGERGINGAVGPPGPRGDTGPPGPQGPPGPQGP---NGLS 2805 Query: 147 LPGFRGTDG 121 +PG +G G Sbjct: 2806 IPGEQGRQG 2814 Score = 28.1 bits (61), Expect = 5.8 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDG-SIP-TRARR 97 PG P G G PR + + A G GPR G PG +G +G SIP + R+ Sbjct: 2754 PGPPGPAGGPGAKGPRGERGINGAVGPPGPRGDTGPPGPQGPPGPQGPNGLSIPGEQGRQ 2813 Query: 96 GL 91 G+ Sbjct: 2814 GM 2815
>DMRT2_HUMAN (Q9Y5R5) Doublesex- and mab-3-related transcription factor 2| (Doublesex-like 2 protein) (DSXL-2) Length = 226 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 PG P + G QPR P A+ TGPR T G Sbjct: 72 PGMPGQPEQRGGPQPRPPLAPQASPAGTGPRERCTPAG 109
>DVL2_MOUSE (Q60838) Segment polarity protein dishevelled homolog DVL-2| (Dishevelled-2) (DSH homolog 2) Length = 736 Score = 30.4 bits (67), Expect = 1.2 Identities = 28/97 (28%), Positives = 34/97 (35%), Gaps = 24/97 (24%) Frame = -3 Query: 312 PSPY----PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTG----------- 178 P PY PP+ E SS G G+ + S G + T+ AG TG Sbjct: 558 PHPYSPQPPPYHELSSYTYGGGSASSQHSEG-SRSSGSTRSDGGAGRTGRPEERAPESKS 616 Query: 177 ---------PRSARTRRGLLPGFRGTDGSIPTRARRG 94 R RRG PG G G P+R G Sbjct: 617 GSGSESELSSRGGSLRRGGEPGGTGDGGPPPSRGSTG 653
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 30.4 bits (67), Expect = 1.2 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Frame = -3 Query: 282 SSPAEGPGNPAK---NGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIP 112 + P+ PG P K NG G D + + + A G GP LPG G GS Sbjct: 294 AGPSGEPGMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNG-------LPGLPGRAGSKG 346 Query: 111 TRARRG 94 + RG Sbjct: 347 EKGERG 352 Score = 30.4 bits (67), Expect = 1.2 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 5/53 (9%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----LPGFRGTDG 121 PG P G G+D + P G GP+ A + G LPG G DG Sbjct: 34 PGPPGPPGKPGQDGIDGEAGPPGLPGPPGPKGAPGKPGKPGEAGLPGLPGVDG 86 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Frame = -3 Query: 306 PYPPHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGF 136 P PP +GP G + G +G+D + P AG G + RGL LPG Sbjct: 180 PGPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGP 239 Query: 135 RGTDG 121 G G Sbjct: 240 LGPPG 244
>SFTPD_HUMAN (P35247) Pulmonary surfactant-associated protein D precursor (SP-D)| (PSP-D) Length = 375 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGT 127 P + + P+ PG P G GR+ P + G GP+ +G + PG +G+ Sbjct: 96 PGPKGDTGPSGPPGPPGVPGPAGREGPLGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGS 155 Query: 126 DGS 118 G+ Sbjct: 156 AGA 158
>MARCO_HUMAN (Q9UEW3) Macrophage receptor MARCO (Macrophage receptor with| collagenous structure) (Scavenger receptor class A member 2) Length = 520 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 6/66 (9%) Frame = -3 Query: 300 PPHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----LPG 139 PP + + +GP G P K G+ G P+ + G GP+ +G LPG Sbjct: 197 PPGVKGEAGLQGPQGAPGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPG 256 Query: 138 FRGTDG 121 +G G Sbjct: 257 SKGDRG 262
>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3| Length = 266 Score = 30.0 bits (66), Expect = 1.5 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAA--GSTGPRSARTRRGLLPGFRGT 127 P ++ S P PG P G G+D P P A G+ GP+ + G PG G Sbjct: 150 PGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGTPGPQGPPGQPG-QPGHDGQ 208 Query: 126 DGS 118 G+ Sbjct: 209 PGA 211
>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/50 (32%), Positives = 20/50 (40%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSI 115 PG P G G + H GS+GPR PGF+G G + Sbjct: 887 PGQPGSPGPAGTPGLPGEKGDHGLPGSSGPRGD-------PGFKGDKGDV 929 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/48 (37%), Positives = 20/48 (41%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PGNP G G+D P G+ G R G LPGF G G Sbjct: 102 PGNPGLPGIPGQDGPPGPPGIPGCNGTKGERGPLGPPG-LPGFSGNPG 148
>PTN23_MOUSE (Q6PB44) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) Length = 1692 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -1 Query: 308 PPTLPTGNLVAPRRDPGIQLKMDPWGGTNPEPKPNP 201 PP +PTG V PR P Q + P P+P+P P Sbjct: 963 PPGIPTGFPV-PRTGPQAQAQPQPQPQPQPQPQPQP 997
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/73 (28%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-LPGFRG 130 P PP S PG P G+ G R + P G G R + G+ PG G Sbjct: 154 PGPPGLPGPSGITVPGKPGAQGAPGPPGFRGEPGPQGEPGPRGDRGLKGDNGVGQPGLPG 213 Query: 129 TDGSIPTRARRGL 91 G GL Sbjct: 214 APGQAGAPGPPGL 226
>C1QC_HUMAN (P02747) Complement C1q subcomponent subunit C precursor| Length = 245 Score = 29.6 bits (65), Expect = 2.0 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG P K+G G P+ + A G GP+ + G LPG G +G Sbjct: 42 PGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPG-LPGHPGKNG 88
>COLQ_RAT (O35167) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) (Acetylcholinesterase-associated collagen) Length = 458 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/69 (31%), Positives = 26/69 (37%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 P + P PG P G G + PR + G G R +G PG RG G Sbjct: 127 PGRKGRPGPPGVPGEPGPVGWPGPEGPRGEKGDVGMMGLPGSRGPMGSKG-FPGSRGEKG 185 Query: 120 SIPTRARRG 94 S R RG Sbjct: 186 S---RGERG 191 Score = 27.7 bits (60), Expect = 7.6 Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 12/84 (14%) Frame = -3 Query: 309 SPYPPHRESSSPAEGPGNP-AKNGSLGRDQPRAQTKPHAAAGS---------TGPRSART 160 SP PP + G P + G LGR + + P G GPR + Sbjct: 99 SPGPPGPQGPPGLPGKAGPKGEKGDLGRPGRKGRPGPPGVPGEPGPVGWPGPEGPRGEKG 158 Query: 159 RRGL--LPGFRGTDGSIPTRARRG 94 G+ LPG RG GS RG Sbjct: 159 DVGMMGLPGSRGPMGSKGFPGSRG 182 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/59 (28%), Positives = 23/59 (38%) Frame = -3 Query: 297 PHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 P ++ E +P GSLG P P G GP+ + G PG +G G Sbjct: 77 PDMKNLLELEASPSPCMQGSLGSPGPPGPQGPPGLPGKAGPKGEKGDLG-RPGRKGRPG 134
>RAD5_USTMA (Q4PGG5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1387 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -3 Query: 285 SSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGST 181 +SSP+ PG+P+K S QP A P + +T Sbjct: 19 ASSPSATPGSPSKQASQASKQPDALVTPSSVTANT 53
>ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII subunit A2| (Elongin A2) (EloA2) (Transcription elongation factor B polypeptide 3B) Length = 753 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/61 (26%), Positives = 27/61 (44%) Frame = -3 Query: 288 ESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPT 109 E+++ P + ++ R P Q +PH + S PR+ R + P G + PT Sbjct: 114 ENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGRYRASPT 173 Query: 108 R 106 R Sbjct: 174 R 174
>COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 482 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/51 (37%), Positives = 22/51 (43%) Frame = -3 Query: 273 AEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 AEGP P K G +G P + P G GP + LPG G DG Sbjct: 61 AEGP--PGKTGPVGPQGPSGKPGPEGLRGIPGPVGEQG----LPGAAGQDG 105 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/56 (28%), Positives = 22/56 (39%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRG 94 G G G D Q P +G GP +RG PG G++G + +G Sbjct: 3 GQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRG-PPGASGSEGGQGEKGAKG 57
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 15/76 (19%) Frame = -3 Query: 300 PPHRESSSPAEGP----GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL---- 145 PP + ++ GP G P G G P+ + P G+ GP +RG Sbjct: 254 PPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGVQGAPGPAGEEGKRGARGEPG 313 Query: 144 -------PGFRGTDGS 118 PG RG GS Sbjct: 314 GAGPAGPPGERGAPGS 329 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIPTRARRGL 91 G P G G+ P G GP+ AR + G++ PG +G +G +GL Sbjct: 379 GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGL 437 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/47 (34%), Positives = 20/47 (42%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 G P G+ G PR P A G GP+ G + GF+G G Sbjct: 238 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPG-IAGFKGEQG 283
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSART--RRGLLPG 139 P P P PA PG PA+ GR +P ++P G R+ ++ R L P Sbjct: 15 PGPGPRPLWGPGPAWSPGFPARP---GRGRPYMASRPPGDLAEAGGRALQSLQLRLLTPT 71 Query: 138 FRGTDG 121 F G +G Sbjct: 72 FEGING 77
>DPY5_CAEEL (P91285) Cuticle collagen dpy-5 (Protein dumpy-5)| Length = 284 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Frame = -3 Query: 297 PHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTG---PRSARTRR 154 P E + A+GP G P K+G G D Q P A G+ P R RR Sbjct: 231 PGEEGQTGAQGPTGQPGKDGFNGNDGTPGQAGPQGAVGADAEYCPCPERKRR 282
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 2/67 (2%) Frame = -3 Query: 285 SSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIP 112 S P G P +GS+G AGS GP A RG G RG G Sbjct: 959 SIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPG 1018 Query: 111 TRARRGL 91 + RGL Sbjct: 1019 DKGHRGL 1025 Score = 29.6 bits (65), Expect = 2.0 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKN-GSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LP 142 P+ P + PA GP PA + G G D + G GP+ AR G LP Sbjct: 122 PAGEPGEPGQTGPA-GPRGPAGSPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLP 180 Query: 141 GFRGTDG 121 GF+G G Sbjct: 181 GFKGVKG 187 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 S PA G+P + G +G P P AAG G + + +G Sbjct: 708 SGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGEKGTKG 751 Score = 29.3 bits (64), Expect = 2.6 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 14/76 (18%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKP---HAAAGSTGPRSARTRRGL-----------LPG 139 P+ PG P + G G R P + A G GP+ + +G LPG Sbjct: 506 PSGDPGKPGERGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPG 565 Query: 138 FRGTDGSIPTRARRGL 91 GT G + RGL Sbjct: 566 PSGTTGEVGKPGERGL 581 Score = 28.5 bits (62), Expect = 4.4 Identities = 20/63 (31%), Positives = 22/63 (34%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRA 103 S P PGNP NG G A G GPR +PG G G+ R Sbjct: 297 SGPVGPPGNPGTNGLTGAKGATGLPGVAGAPGLPGPRG-------IPGPAGAAGATGARG 349 Query: 102 RRG 94 G Sbjct: 350 LVG 352 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSI 115 PG P +NG+ G+ R G+ GP G RG+DGS+ Sbjct: 207 PGAPGENGTPGQAGARGLPGERGRVGAPGP----------AGARGSDGSV 246 Score = 27.3 bits (59), Expect = 9.9 Identities = 22/64 (34%), Positives = 25/64 (39%) Frame = -3 Query: 285 SSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTR 106 ++ P+ G P GS G P T AAG TGP G PG G G R Sbjct: 767 AAGPSGPNGPPGPVGSRGDGGPPGMTGFPGAAGRTGPPGPSGIAG-PPGPPGAAGKEGIR 825 Query: 105 ARRG 94 RG Sbjct: 826 GPRG 829
>ZN580_MOUSE (Q9DB38) Zinc finger protein 580| Length = 172 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/54 (35%), Positives = 23/54 (42%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL 145 P PPH SSSP P K P+A+ ++ GPR R R LL Sbjct: 6 PRPPHPRSSSPEVMDPPPPKTPPF----PKAEGPSSTSSSVAGPRPPRLGRHLL 55
>ZN580_HUMAN (Q9UK33) Zinc finger protein 580 (LDL-induced EC protein)| Length = 172 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/54 (35%), Positives = 23/54 (42%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL 145 P PPH SSSP P K P+A+ + + GPR R R LL Sbjct: 6 PRPPHPRSSSPEAMDPPPPKAPPF----PKAEGPSSTPSSAAGPRPPRLGRHLL 55
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Frame = -3 Query: 306 PYPPH----RESSSPAEGPGNP-AKNGSLGRDQPRAQTKPHAAAGSTGPRSART 160 P P H R + A PG+P + G +D P + KP A + + P A T Sbjct: 1750 PAPKHHRGKRSAGKAAGSPGDPWGQEGEAKKDSPGERAKPRARSTPSNPDGAAT 1803
>CO6A1_MOUSE (Q04857) Collagen alpha-1(VI) chain precursor| Length = 1025 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRG 94 G+P G G P + G+ GP A RG PG RG G+ R RG Sbjct: 388 GSPGDEGDPGEPGPPGEKGEAGDEGNAGPDGAPGERG-GPGERGPRGTPGVRGPRG 442
>GA2L1_HUMAN (Q99501) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| (GAS2-related protein on chromosome 22) (GAR22 protein) Length = 681 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/68 (29%), Positives = 26/68 (38%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 P S GP + L P + +P A + R R R PG RG Sbjct: 366 PLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQL 425 Query: 120 SIPTRARR 97 S+P+ ARR Sbjct: 426 SVPSPARR 433
>COLQ_TORMA (Q03637) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) Length = 471 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Frame = -3 Query: 261 GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRARRG 94 G P + G G PR + G GPR + GL LPG RG G ++G Sbjct: 145 GRPGRKGRPGVRGPRGMPGSPCSPGPIGPRGEKGDIGLTGLPGARGPMGPKGLTGQKG 202
>PATJ_DROME (Q9NB04) Patj homolog| Length = 871 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAG 187 + R SS PG+P K+G +G ++PR Q++ AG Sbjct: 98 FDEQRSSSHSHSAPGSPDKSGGVG-EEPRPQSQNSKGAG 135
>CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor| Length = 689 Score = 29.3 bits (64), Expect = 2.6 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 4/76 (5%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAK---NGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGF 136 P PP A PG P G +G P+ P +G GP R G + G Sbjct: 107 PGPPGLPGPGFAGPPGPPGPVGLPGEIGIRGPKGDPGPDGPSGPPGPPGKPGRPGTIQGL 166 Query: 135 RGT-DGSIPTRARRGL 91 G+ D PT G+ Sbjct: 167 EGSADFLCPTNCPPGM 182
>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor| Length = 1603 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/64 (29%), Positives = 22/64 (34%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGT 127 P PP R P PG P G G PR P G+ G PG +G Sbjct: 781 PGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGS----------PGVKGA 830 Query: 126 DGSI 115 G + Sbjct: 831 TGPV 834 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSI 115 PG P K+GS+G P G+ GP + PG G GS+ Sbjct: 1387 PGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGS-------PGLPGVPGSM 1429 Score = 27.3 bits (59), Expect = 9.9 Identities = 25/75 (33%), Positives = 25/75 (33%), Gaps = 13/75 (17%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGP-----------RSART 160 P PP AEG P G GR P P G GP R A Sbjct: 1262 PGPPGSTGRPGAEG--EPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATG 1319 Query: 159 RRGL--LPGFRGTDG 121 RGL LPG G G Sbjct: 1320 ERGLAGLPGQPGPPG 1334 Score = 27.3 bits (59), Expect = 9.9 Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 8/71 (11%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQ------TKPHAAAGSTGPRSARTRRGL--LPGFRGT 127 + P PG P K GS G P+A+ P GS GP +G L G G Sbjct: 1160 TGPTGSPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGK 1219 Query: 126 DGSIPTRARRG 94 DG R G Sbjct: 1220 DGKPGLRGDPG 1230
>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor| Length = 674 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGT 127 P PP ++ PG P K G G + P+ P G GP PG G Sbjct: 97 PGPPGPSATGKPGLPGLPGKQGERGLNGPKGDIGPAGLPGPRGPPGP-------PGIPGP 149 Query: 126 DG-SIP 112 G S+P Sbjct: 150 AGISVP 155
>YRF2_CAEEL (Q09578) Putative cuticle collagen K03H9.2| Length = 285 Score = 29.3 bits (64), Expect = 2.6 Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 5/77 (6%) Frame = -3 Query: 306 PYPPHRESS-----SPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 PY P +S P PG P + G G + R T A G G LP Sbjct: 131 PYGPKGKSGYKGIDGPPGIPGWPGEPGVRGMNGERGSTGLDGAPGEPGSPG-------LP 183 Query: 141 GFRGTDGSIPTRARRGL 91 GF G GSI +G+ Sbjct: 184 GFAGLPGSIGITGIKGV 200
>CO6A1_CHICK (P20785) Collagen alpha-1(VI) chain precursor| Length = 1019 Score = 29.3 bits (64), Expect = 2.6 Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 11/85 (12%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEG--------PGNPAKNGS---LGRDQPRAQTKPHAAAGSTGPRS 169 +P Y P P E PG+P + G+ G P +T + G+ GP Sbjct: 361 DPGAYGPKGGKGEPGEDGKPGRQGIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPG 420 Query: 168 ARTRRGLLPGFRGTDGSIPTRARRG 94 R G RG GS R RG Sbjct: 421 ERGSN----GERGPPGSPGDRGPRG 441
>CL43_BOVIN (P42916) Collectin-43 precursor (CL-43) (43 kDa collectin)| Length = 321 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIPTRARRG 94 PG P G GR+ P + G+ GP+ G + PG G+ G + RG Sbjct: 66 PGPPGMPGPAGREGPSGRQGSMGPPGTPGPKGEPGPEGGVGAPGMPGSPGPAGLKGERG 124 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/57 (31%), Positives = 20/57 (35%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRG 94 PG P G G R P A G GP A PG +G G + RG Sbjct: 108 PGMPGSPGPAGLKGERGTPGPGGAIGPQGPSGAMGP----PGLKGDRGDPGEKGARG 160
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) (FEL protein) Length = 1210 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGN--PAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 P PH S + P P + ++G QP+ K A AGS GLLP Sbjct: 575 PEAPHPGKRSCQKSPAQQEPPQRQTVGTKQPKKPVKASARAGSRTSLQGEREPGLLP 631
>PDC6I_XENLA (Q9W6C5) Programmed cell death 6-interacting protein (Signal| transduction protein Xp95) Length = 867 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%) Frame = -3 Query: 312 PSPYPPHRESSSP----AEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGP 175 P P PP S+SP A NPA + QP + T P A G P Sbjct: 759 PRPPPPAMPSASPVPASAAQASNPAPTAAADSSQPPSNTIPSQAQGPPYP 808
>COLQ_HUMAN (Q9Y215) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) (Acetylcholinesterase-associated collagen) Length = 456 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = -3 Query: 258 NPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 +P GSLG P P G TGP+ + G PG +G G Sbjct: 91 SPCMQGSLGSPGPPGPQGPPGLPGKTGPKGEKGELG-RPGRKGRPG 135
>CO1A2_RABIT (Q28668) Collagen alpha-2(I) chain precursor (Fragment)| Length = 526 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 2/67 (2%) Frame = -3 Query: 285 SSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL--PGFRGTDGSIP 112 ++ P G P GS+G AGS GP A RG G RG G Sbjct: 113 NAGPVGAAGAPGPQGSVGPTGKHGNRGEPGPAGSIGPVGAAGPRGPSGPQGIRGDKGEPG 172 Query: 111 TRARRGL 91 + RGL Sbjct: 173 DKGPRGL 179
>APD73_APIME (Q06602) Apidaecins type 73 precursor [Contains: Apidaecin;| Apidaecin-1B (Apidaecin IB); Apidaecin-1A (Apidaecin IA)] (Fragment) Length = 283 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 7/53 (13%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQP-------RAQTKPHAAAGSTGP 175 P P PPH AE P N + QP R + KP A G+ P Sbjct: 218 PQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPGNNRP 270 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 7/53 (13%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQP-------RAQTKPHAAAGSTGP 175 P P PPH AE P N + QP R + +P A G+ P Sbjct: 190 PQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRP 242
>COHA1_MOUSE (Q07563) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2)| (180 kDa bullous pemphigoid antigen 2) Length = 1470 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Frame = -3 Query: 312 PSPYPPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGF 136 PS P P EG PG P GS D T P G GP+ + G +PG Sbjct: 903 PSIPGPPGPRGPPGEGVPGPPGPPGSFLTDSETFFTGPPGPPGPPGPKGDQGDPG-VPGT 961 Query: 135 RGTDGSI 115 G G + Sbjct: 962 PGISGGL 968
>HCFC1_MESAU (P51611) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory| protein) (VCAF) [Contains: HCF N-terminal chain 1; HCF N-terminal chain 2; HCF N-terminal chain 3; HCF N-terminal chain 4; HCF N-terminal chain 5; HCF N-terminal chain 6; HCF Length = 2090 Score = 28.9 bits (63), Expect = 3.4 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTK----PHAAAGSTGPRSARTRRGLL 145 P+P P S PA P +PA + QP Q P AAA P S T + +L Sbjct: 414 PNPVP-----SVPANPPKSPAPAAAAPAVQPLTQVGITLVPQAAAA---PPSTTTIQ-VL 464 Query: 144 PGFRGTDGSIPTRAR 100 P G+ S+PT AR Sbjct: 465 PTVPGSSISVPTAAR 479
>PDZK4_HUMAN (Q76G19) PDZ domain-containing protein 4 (PDZ domain-containing| RING finger protein 4-like protein) Length = 769 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Frame = -3 Query: 300 PPHRESSSPAEG---PGNPAKNGSLGRDQPRAQTKPHA-AAGSTGPRSART 160 PP ++PA+ PG+PAK SL RD P A + HA G P++ T Sbjct: 506 PPGPAVATPAKAAPPPGSPAKFRSLSRD-PEAGRRQHAEERGRRNPKTGLT 555
>VGLB_HHV1P (P08665) Glycoprotein B precursor| Length = 904 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = +3 Query: 129 SPGTPAVVPAASALTGAPSIRPPRGVWFGLWVGPSPRIHF*LDSRVPPR 275 SPGTP V A A G P+ P + P P+ + + PPR Sbjct: 34 SPGTPGVAAATQAANGGPATPAPPALGAAPTGDPKPKKNKKPKNPTPPR 82
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 28.9 bits (63), Expect = 3.4 Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 7/78 (8%) Frame = -3 Query: 306 PYPPHRESSSPA-----EGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 P P E +P EGPG P + G G P P G GPR P Sbjct: 1342 PRGPKGEPGAPGQVIGGEGPGLPGRKGDPG---PSGPPGPRGPLGDPGPRGP-------P 1391 Query: 141 GFRGT--DGSIPTRARRG 94 G GT G R RG Sbjct: 1392 GLPGTAMKGDKGDRGERG 1409 Score = 28.1 bits (61), Expect = 5.8 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 5/77 (6%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLL-----P 142 P PP + S GPG + G G + + + G GP+ R G+ P Sbjct: 2087 PGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEP---GSNGDQGPKGDRGVPGIKGDRGEP 2143 Query: 141 GFRGTDGSIPTRARRGL 91 G RG DG+ RG+ Sbjct: 2144 GPRGQDGNPGLPGERGM 2160
>YCHD_SCHPO (Q9Y7V2) Protein C645.13 in chromosome III| Length = 721 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/46 (36%), Positives = 17/46 (36%) Frame = -3 Query: 288 ESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 ESS PA N GR PR S P S R RRG Sbjct: 125 ESSEPASTNSNVGMTTRSGRQSPRTPIGSTTPKSSHSPPSTRKRRG 170
>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI| domain-containing protein 2) (Emu2 protein) (Emilin and multimerin domain-containing protein 2) Length = 441 Score = 28.9 bits (63), Expect = 3.4 Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 3/65 (4%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGN---PAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGF 136 P P R + PA PG P G G R QT AG G RG LPG Sbjct: 190 PVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRG-LPGE 248 Query: 135 RGTDG 121 G G Sbjct: 249 MGRPG 253
>DIG1_CAEEL (Q09165) Mesocentin precursor| Length = 13100 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -2 Query: 229 GPTQSPNQTPRGGRI---DGAPVSADAAGTTAGVPGDGRI 119 GP P T G+ DG+P+ DA+G VP DG + Sbjct: 5470 GPDGEPIPTDASGKPLSQDGSPLPTDASGNYILVPSDGEV 5509
>PG20_MYCTU (O53416) Hypothetical PE-PGRS family protein PE_PGRS20| Length = 463 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = -3 Query: 267 GPGNPAK-NGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRAR 100 G G+ AK NG G D + G G + GL+PG GT G+ +R + Sbjct: 397 GAGSGAKGNGGNGGDGGKGGDAQLIGNGGNGGNGGKGGTGLMPGINGTGGAGGSRGQ 453
>STUA_EMENI (P36011) Cell pattern formation-associated protein stuA| Length = 622 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = -3 Query: 294 HRESSSPAEGPGNPAKNGSLGRDQPR-AQTKPHAAAGST---GPRSARTRRGLLPGFRGT 127 H S + G+P +NGS GR PR + T P A G T P +A + ++ RGT Sbjct: 476 HDHSQLTPDMTGSPQQNGS-GRMTPRTSNTAPQWAPGYTTPPRPAAASSLYNIVSDTRGT 534 Query: 126 DGS 118 G+ Sbjct: 535 SGA 537
>MGAT3_HUMAN (Q09327) Beta-1,4-mannosyl-glycoprotein| 4-beta-N-acetylglucosaminyltransferase (EC 2.4.1.144) (N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase III) (N-acetylglucosaminyltransferase III) (GNT-III) (GlcNAc-T III) Length = 533 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/64 (32%), Positives = 23/64 (35%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PP R P EG NGS R PR G G R LPG+ G Sbjct: 129 PPGRPEEKP-EGA-----NGSSARRPPRYLLSARERTGGRGARRKWVECVCLPGWHGPSC 182 Query: 120 SIPT 109 +PT Sbjct: 183 GVPT 186
>MSRE_HUMAN (P21757) Macrophage scavenger receptor types I and II (Macrophage| acetylated LDL receptor I and II) (Scavenger receptor class A member 1) (CD204 antigen) Length = 451 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 2/63 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPGFRGTDGSIPTRA 103 P PG G G PR P G G R A G LPG+ G G+ + Sbjct: 274 PPGPPGEKGDRGPTGESGPRGFPGPIGPPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKG 333 Query: 102 RRG 94 ++G Sbjct: 334 QKG 336
>M3K11_HUMAN (Q16584) Mitogen-activated protein kinase kinase kinase 11 (EC| 2.7.11.25) (Mixed lineage kinase 3) (Src-homology 3 domain-containing proline-rich kinase) Length = 847 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -1 Query: 308 PPTLPTGNLVAPRRDPGIQLKMDPWGGTNPEPKPNP 201 P + P G + PR P ++ ++DPW + P+P+P Sbjct: 756 PRSPPLGLISRPRPSP-LRSRIDPWSFVSAGPRPSP 790
>CHIT_STRLI (P36909) Chitinase C precursor (EC 3.2.1.14)| Length = 619 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -2 Query: 235 GEGPTQSPNQTPRGGRIDGAPVSADAAGTTAGVP 134 G GP N GG DG V DAA + G P Sbjct: 115 GSGPGSPSNCKLNGGSCDGTSVPGDAAPSAPGTP 148
>YO25_CAEEL (P34675) Hypothetical protein ZK688.5| Length = 1620 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQT-----KPHAAAGSTGPRSARTR 157 P P R +S+PA +P + S+ D P Q P A A R AR R Sbjct: 981 PAPTPRTTSAPATVQSSPTRQESMDIDSPNVQNPGHVESPAAIAARQAARVARAR 1035
>TAF10_HUMAN (Q12962) Transcription initiation factor TFIID subunit 10| (Transcription initiation factor TFIID 30 kDa subunit) (TAF(II)30) (TAFII-30) (TAFII30) (STAF28) Length = 218 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 5/62 (8%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSART-----RRGL 148 P P PP S+PA P + A AAAG TGP +AR RRG Sbjct: 21 PGPAPP---VSAPAALPSSTAAENKASPAGTAGGPGAGAAAGGTGPLAARAGEPAERRGA 77 Query: 147 LP 142 P Sbjct: 78 AP 79
>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)| Length = 963 Score = 28.9 bits (63), Expect = 3.4 Identities = 27/84 (32%), Positives = 30/84 (35%), Gaps = 18/84 (21%) Frame = -3 Query: 315 NPSP-YPPHRESSSPAEGP----------GNPAKNGSL-------GRDQPRAQTKPHAAA 190 NPS YP + S P GP GNP S G PR + P Sbjct: 347 NPSAQYPTGKRGSHPGFGPQRPRPGTRPRGNPCDQCSAQPNHCPSGPPGPRGRPGPPGFP 406 Query: 189 GSTGPRSARTRRGLLPGFRGTDGS 118 G GPR RGL G+ G S Sbjct: 407 GQDGPRGL---RGLNGGYSGVQPS 427
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQ---TKPHAAAGSTGPRSA 166 P P P SSP+ G G+P S P Q PH +AG P S+ Sbjct: 405 PEPNRPWPGGSSPSPGSGHPLPPASPHHVPPLQQQPPPPPHVSAGGPPPSSS 456
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRR 154 N S P +E S PA PG P + GR +P AA G RSAR RR Sbjct: 246 NSSAQAPRQEDSRPARARPGPPTRGRRRGR-------RP-AAPGPASRRSARLRR 292
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRR 154 N S P +E S PA PG P + GR +P AA G RSAR RR Sbjct: 246 NSSAQAPRQEDSRPARARPGPPTRGRRRGR-------RP-AAPGPASRRSARLRR 292
>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor| Length = 1691 Score = 28.5 bits (62), Expect = 4.4 Identities = 22/74 (29%), Positives = 29/74 (39%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 P+ P S P+ G P G G D R + P G GP S + G PGF Sbjct: 1239 PAGLPGAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTG-DPGFP 1297 Query: 132 GTDGSIPTRARRGL 91 G G + +G+ Sbjct: 1298 GIPGPKGPKGDQGI 1311
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 28.5 bits (62), Expect = 4.4 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 3/71 (4%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGR---DQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 P P P +++ P GP P G+ D P + P A G + + P Sbjct: 465 PRPTTPGPQTTPP--GPATPGPVGASAAPTADSPLTASPPATAPGPSAANVSVAATTATP 522 Query: 141 GFRGTDGSIPT 109 G RGT + PT Sbjct: 523 GTRGTARTPPT 533
>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 751 Score = 28.5 bits (62), Expect = 4.4 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 17/81 (20%) Frame = -3 Query: 309 SPYPPHRESSSPAEGPGNPA-----------------KNGSLGRDQPRAQTKPHAAAGST 181 SP P SS P P +PA +NGS G Q + + A G T Sbjct: 402 SPTRPTPGSSDPLIKPSSPAVCPEPATSPKYVSSVTPRNGSPGTKQMKLK----GADGKT 457 Query: 180 GPRSARTRRGLLPGFRGTDGS 118 G + A R PG +GT + Sbjct: 458 GAKIATPRGAATPGQKGTSNA 478
>LAS17_YEAST (Q12446) Proline-rich protein LAS17| Length = 633 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/36 (41%), Positives = 16/36 (44%) Frame = -1 Query: 308 PPTLPTGNLVAPRRDPGIQLKMDPWGGTNPEPKPNP 201 PPTLP+ AP P L P G P P P P Sbjct: 492 PPTLPSTTSAAPPPPPAF-LTQQPQSGGAPAPPPPP 526
>GUN2_THEFU (P26222) Endoglucanase E-2 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E-2) (Cellulase E-2) (Cellulase E2) Length = 441 Score = 28.5 bits (62), Expect = 4.4 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = -1 Query: 233 GGTNPEPKPNPT 198 GGTNP P PNPT Sbjct: 318 GGTNPNPNPNPT 329
>ADA2B_MACPR (O19025) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)| (Alpha-2B adrenoreceptor) (Fragment) Length = 387 Score = 28.5 bits (62), Expect = 4.4 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +3 Query: 141 PAVVPAASALTGAPSIRPPRG 203 P VPA+ AL +PS++PP+G Sbjct: 291 PEAVPASPALACSPSLQPPQG 311
>SFTPA_CAVPO (P50403) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 247 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PG P +G GRD G GP G++PGF G +G Sbjct: 32 PGTPGSHGLPGRDGR------DGVKGDPGPPGPMGPPGVMPGFPGCNG 73
>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor| Length = 1775 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 13/70 (18%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-------------LPGFRGTD 124 PG + G+ G + P+ P G GP + GL +PG+ G Sbjct: 451 PGKKGEKGTAGLNGPKGSIGPIGHPGPPGPEGQKGDAGLPGYGIQGSKGDAGIPGYPGLK 510 Query: 123 GSIPTRARRG 94 GS R +G Sbjct: 511 GSKGERGFKG 520
>PLK3_MOUSE (Q60806) Serine/threonine-protein kinase PLK3 (EC 2.7.11.21)| (Polo-like kinase 3) (PLK-3) (Cytokine-inducible serine/threonine-protein kinase) (FGF-inducible kinase) Length = 631 Score = 28.5 bits (62), Expect = 4.4 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGS----TGPRSART-RRG 151 +P P+P S+P GPG PA + R +P P A T P S RT +G Sbjct: 9 SPRPFPRAAVPSAPPAGPGPPA--NASPRSEPEVLAGPRAPDPPGRLITDPLSGRTYTKG 66 Query: 150 LLPGFRG 130 L G G Sbjct: 67 RLLGKGG 73
>HCLS1_HUMAN (P14317) Hematopoietic lineage cell-specific protein (Hematopoietic| cell-specific LYN substrate 1) (LckBP1) (p75) Length = 486 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -1 Query: 308 PPTLPTGNLVAPRRDPGIQLKMDPWGGTNPEPKPNP 201 PP LP PR G+Q++ +P PEP+P P Sbjct: 341 PPALP------PRTLEGLQVEEEPVYEAEPEPEPEP 370
>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) (mDIA1) (p140mDIA) Length = 1255 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/41 (39%), Positives = 18/41 (43%) Frame = +3 Query: 126 PSPGTPAVVPAASALTGAPSIRPPRGVWFGLWVGPSPRIHF 248 P PG P + P GAP I PP G+ V P P F Sbjct: 701 PLPGGPGLPPPPPPFPGAPGIPPPPP---GMGVPPPPPFGF 738
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/60 (35%), Positives = 21/60 (35%) Frame = +2 Query: 119 DPSVPRNPGSSPRRVRADRGPVDPXXXXXXXXXXXXSLPKDPFLAGFPGPSAGLLDSRWG 298 DP P P SP A DP P DP L G PG S G D R G Sbjct: 342 DPGPPGLPAYSPHPSLAKGARGDPGFPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRG 401
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/57 (28%), Positives = 22/57 (38%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRG 94 PG P G +G + H GS+GPR PG +G G + + G Sbjct: 887 PGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGD-------PGLKGDKGDVGLPGKPG 936 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/48 (37%), Positives = 20/48 (41%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PGNP G G+D P G+ G R G LPGF G G Sbjct: 102 PGNPGLPGIPGQDGPPGPPGIPGCNGTKGERGPLGPPG-LPGFAGNPG 148 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/54 (33%), Positives = 21/54 (38%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSI 115 P PG P NG+ G P AG+ GP LPG +G G I Sbjct: 116 PPGPPGIPGCNGTKGERGPLGPPGLPGFAGNPGPPG-------LPGMKGDPGEI 162
>C1QT2_HUMAN (Q9BXJ5) Complement C1q tumor necrosis factor-related protein 2| precursor Length = 285 Score = 28.5 bits (62), Expect = 4.4 Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 1/72 (1%) Frame = -3 Query: 306 PYPPHRESSSPAEGP-GNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 P PP S G G P K+G G D R + G TG R PG +G Sbjct: 45 PGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPGRTGNRGK-------PGPKG 97 Query: 129 TDGSIPTRARRG 94 G+I RG Sbjct: 98 KAGAIGRAGPRG 109
>ATX2L_MOUSE (Q7TQH0) Ataxin-2-like protein| Length = 1049 Score = 28.5 bits (62), Expect = 4.4 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAK--NGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 P P H ++SSP GPG+ A+ NG R P+AQ A + P + + +P Sbjct: 378 PPRGPHHLDNSSP--GPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPSNRPSGEASVP 434
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 28.5 bits (62), Expect = 4.4 Identities = 23/62 (37%), Positives = 26/62 (41%) Frame = -3 Query: 309 SPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRG 130 SP PP P GP P G Q R + P A AG TGP A LPG +G Sbjct: 129 SPPPPPPAKGHP--GPAQPLLPGHAL--QRRCEAAPAAGAG-TGPGCALLPDKSLPGLKG 183 Query: 129 TD 124 + Sbjct: 184 KE 185
>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5| Length = 317 Score = 28.1 bits (61), Expect = 5.8 Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 5/70 (7%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEG-----PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 NP P P+ +PA G PG P G G G +G RS RG Sbjct: 147 NPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRS----RG 202 Query: 150 LLPGFRGTDG 121 LPG G G Sbjct: 203 -LPGPSGRPG 211
>SYN3_RAT (O70441) Synapsin-3 (Synapsin III)| Length = 579 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPR--AQTKPHAAAGSTGPRS 169 PSP P + A+ PG LG+ QPR Q P A PRS Sbjct: 403 PSPLRPWGPQTKSAKSPGQGQLGPLLGQPQPRPPPQGGPRQAQSPQPPRS 452
>VGLB_HHV1K (P06437) Glycoprotein B precursor| Length = 904 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = +3 Query: 129 SPGTPAVVPAASALTGAPSIRPPRGVWFGLWVGPSPRIHF*LDSRVPPR 275 SPGTP V A A G P+ P + P P+ + + PPR Sbjct: 34 SPGTPGVAAATQAANGGPATPAPPPLGAAPTGDPKPKKNKKPKNPTPPR 82
>MISS_MOUSE (Q9D7G9) MAPK-interacting and spindle-stabilizing protein| (Mitogen-activated protein kinase 1-interacting protein 1) Length = 263 Score = 28.1 bits (61), Expect = 5.8 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 8/77 (10%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGP--------RSART 160 NP P PP ++S GPG+ + + P + P + STG +S + Sbjct: 147 NPYPLPPGPSAAS--PGPGSLHRMNEIPGGSPSDSSNPESTLESTGQKKHLKLDNKSIKR 204 Query: 159 RRGLLPGFRGTDGSIPT 109 RR R T G I T Sbjct: 205 RRSKKKSKRVTWGDIKT 221
>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2| Length = 953 Score = 28.1 bits (61), Expect = 5.8 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 2/69 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKP--HAAAGSTGPRSARTRRGLLPG 139 P P P + PA A GS+ R Q + KP A + P S+ R PG Sbjct: 132 PKPAAPKPAAPKPAAQSSTTATPGSMPRPQAKPAPKPGGRAPRVANNPFSSGPRPAPRPG 191 Query: 138 FRGTDGSIP 112 G+ P Sbjct: 192 GGNRSGNAP 200
>CBPA_DICDI (P35085) Calcium-binding protein| Length = 467 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 2/69 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL--LPG 139 P YPP ++ P + PG P G P+ +P A G ++ + G PG Sbjct: 155 PGQYPPQQQGQYPPQQPGQP------GAYPPQQPGQPGAYPPQQGVQNTLAKTGAPGQPG 208 Query: 138 FRGTDGSIP 112 G+ P Sbjct: 209 VPPPQGAYP 217 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +3 Query: 129 SPGTPAVVPAASALTGAPSIRPPRGVWFG 215 +PG P V P A G P + P +G + G Sbjct: 203 APGQPGVPPPQGAYPGQPGVPPQQGAYPG 231
>APD14_APIME (Q06601) Apidaecins type 14 precursor [Contains: Apidaecin-2| (Apidaecin II); Apidaecin-1B (Apidaecin IB); Apidaecin-1A (Apidaecin IA)] Length = 168 Score = 28.1 bits (61), Expect = 5.8 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 6/52 (11%) Frame = -3 Query: 312 PSPYPPH----RESSSPAEGPGN--PAKNGSLGRDQPRAQTKPHAAAGSTGP 175 P P PPH RE+ S AE PGN P PR + +P A G+ P Sbjct: 79 PQPRPPHPRLRREAESEAE-PGNNRPVYIPQPRPPHPRLRREPEAEPGNNRP 129
>RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2| Length = 1514 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Frame = -2 Query: 268 GTRESS*KWILGEGPTQSPNQTPRGGRIDGA---PVSADAAGTTAGVP 134 G+ K + GP+Q+P PR G ++GA P +A G G P Sbjct: 1293 GSGSEKKKGVGSGGPSQAPPPPPREGVVEGAEACPAPEEALGQERGWP 1340
>DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like protein 1| precursor (Down syndrome cell adhesion molecule 2) Length = 2053 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Frame = +3 Query: 114 GSIRPSPG-TPAVVPAA-SALTGAPSIRPPR 200 G+ P+PG TPA P A SA APS PPR Sbjct: 1982 GTAPPAPGPTPAEPPTAPSAAPPAPSTEPPR 2012
>ZN687_HUMAN (Q8N1G0) Zinc finger protein 687| Length = 1237 Score = 28.1 bits (61), Expect = 5.8 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 11/69 (15%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGP-----------RSARTRRGLL 145 R SS+ A+GPG + S + T P A + GP S+ T + L+ Sbjct: 1066 RGSSARAQGPGRKRRQSSDSCSEEPDSTTPPAKSPRGGPGSGGHGPLRYRSSSSTEQSLM 1125 Query: 144 PGFRGTDGS 118 G R DG+ Sbjct: 1126 MGLRVEDGA 1134
>EDNRB_PIG (P35463) Endothelin B receptor precursor (ET-B) (Endothelin| receptor Non-selective type) Length = 443 Score = 25.0 bits (53), Expect(2) = 5.8 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -2 Query: 223 TQSPNQTPRGGRIDGAPVSADAAGTTAGVPGDGRID 116 + SP Q P+GGR+ G P A T P +G I+ Sbjct: 66 SSSPPQMPKGGRMAGPP-----ARTLTPPPCEGPIE 96 Score = 21.6 bits (44), Expect(2) = 5.8 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -1 Query: 308 PPTLPTGNLVAP 273 PP L TG +VAP Sbjct: 38 PPALRTGEIVAP 49
>DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain) (B-dynamin)| Length = 851 Score = 27.7 bits (60), Expect = 7.6 Identities = 22/53 (41%), Positives = 27/53 (50%) Frame = +3 Query: 114 GSIRPSPGTPAVVPAASALTGAPSIRPPRGVWFGLWVGPSPRIHF*LDSRVPP 272 GS P+PG P PA SAL GAP + P R GP P++ +R PP Sbjct: 794 GSRGPAPGPP---PAGSALGGAPPV-PSRPGASPDPFGPPPQVPS-RPNRAPP 841
>MAP4_HUMAN (P27816) Microtubule-associated protein 4 (MAP 4)| Length = 1152 Score = 27.7 bits (60), Expect = 7.6 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -3 Query: 282 SSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLP 142 +SP++ PA Q A+T AA STGP S+R+ LLP Sbjct: 786 ASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGP-SSRSPSTLLP 831
>XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG protein)| Length = 439 Score = 27.7 bits (60), Expect = 7.6 Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 1/74 (1%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRD-QPRAQTKPHAAAGSTGPRSARTRRGLLPGF 136 P+P P E+ +PAEG G PA + G + P P A G + G P Sbjct: 45 PAPAPAEGEAPAPAEG-GAPAPAPAEGAEPAPADGGAPAPAPAEGGAPAPAPAEGGAPAP 103 Query: 135 RGTDGSIPTRARRG 94 +G P A G Sbjct: 104 APAEGGAPAPAEGG 117
>RAB26_MOUSE (Q504M8) Ras-related protein Rab-26| Length = 260 Score = 27.7 bits (60), Expect = 7.6 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = -3 Query: 240 SLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGSIPTRARRGL 91 S G +P T P AAA + GPR A R + PG P R L Sbjct: 9 SKGGSEPATSTLPAAAAATNGPRLAHPRT-VRPGPEAPPNGPPQSIRPSL 57
>FOXD2_HUMAN (O60548) Forkhead box protein D2 (Forkhead-related protein FKHL17)| (Forkhead-related transcription factor 9) (FREAC-9) Length = 497 Score = 27.7 bits (60), Expect = 7.6 Identities = 20/66 (30%), Positives = 26/66 (39%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDG 121 PP E+ + + S G + A AAAGS GP +A R PG G Sbjct: 58 PPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSG 117 Query: 120 SIPTRA 103 TR+ Sbjct: 118 GAATRS 123
>SMOO_HUMAN (P53814) Smoothelin| Length = 917 Score = 27.7 bits (60), Expect = 7.6 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 12/68 (17%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSL-------GRDQPRAQTKPHA-----AAGSTGPRS 169 P P PP S P E P P+ G + ++ P AQ+ P A GPR Sbjct: 236 PPPSPPKTTSPEPQESPTLPSTEGQVVNKLLSGPKETPAAQSPPRGPSDTKRADVAGPRP 295 Query: 168 ARTRRGLL 145 + +L Sbjct: 296 CQRSLSVL 303
>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor| Length = 323 Score = 27.7 bits (60), Expect = 7.6 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG--LLPGFRGTDGSIPTRA 103 PA PG G+ G P Q GS GP R G PG G G+ P +A Sbjct: 136 PAGSPGPAGAPGAPGPQGPNGQPGHPGQGGSQGPAGPRGPAGDAGAPGQVGAPGN-PGQA 194 Query: 102 RRG 94 RG Sbjct: 195 GRG 197
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 27.7 bits (60), Expect = 7.6 Identities = 21/73 (28%), Positives = 25/73 (34%), Gaps = 1/73 (1%) Frame = -3 Query: 312 PSP-YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGF 136 PSP P PA+ PG + G G + G G RRG G Sbjct: 312 PSPAMMPPTPGQMPAKAPGKGGRGGQAGGGAGGGFNRGGGTGGGAGRGG---RRGGTAGA 368 Query: 135 RGTDGSIPTRARR 97 G G P R R+ Sbjct: 369 FGRPGGAPRRGRK 381
>CHN_DROME (Q7YU81) Protein charlatan| Length = 1108 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = +3 Query: 129 SPGTPAVVPAASALTGAPSIRPP 197 SPGT AV AA+A T PSI P Sbjct: 817 SPGTAAVSVAAAAATSPPSISGP 839
>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)| Length = 864 Score = 27.7 bits (60), Expect = 7.6 Identities = 22/53 (41%), Positives = 27/53 (50%) Frame = +3 Query: 114 GSIRPSPGTPAVVPAASALTGAPSIRPPRGVWFGLWVGPSPRIHF*LDSRVPP 272 GS P+PG P PA SAL GAP + P R GP P++ +R PP Sbjct: 794 GSRGPAPGPP---PAGSALGGAPPV-PSRPGASPDPFGPPPQVPS-RPNRAPP 841
>COLL5_MIMIV (Q5UPS6) Collagen-like protein 5| Length = 812 Score = 27.7 bits (60), Expect = 7.6 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Frame = -3 Query: 282 SSPAEG-PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----LPGFRGTDG 121 +S A+G G+P NGS G + + G G + + GL G +G DG Sbjct: 70 ASGAQGVKGDPGSNGSKGTKGEKGDKGDKGSKGDNGEKGEKGDAGLNGLDGSKGDKGDDG 129 Query: 120 SIPTRARRG 94 S ++ +G Sbjct: 130 SKGSKGNKG 138
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 27.7 bits (60), Expect = 7.6 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 6/72 (8%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGST------GPRSARTRRG 151 P P P P PG+P G+ G PR Q A G+ G RG Sbjct: 132 PGPTGPEGPPG-PNGAPGHPGAPGAPGEKGPRGQDGHPGAPGNAGHPGQPGQPGPPGERG 190 Query: 150 LLPGFRGTDGSI 115 + P + DG + Sbjct: 191 VCPKYCSMDGGV 202
>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor| Length = 680 Score = 27.7 bits (60), Expect = 7.6 Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 4/66 (6%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL----LPG 139 P PP + PG P + G G PR A G+ G + G PG Sbjct: 141 PGPPGIPGPAGISVPGKPGQQGLTGAPGPRGFPGEKGAQGAPGVNGRKGETGYGSPGRPG 200 Query: 138 FRGTDG 121 RG G Sbjct: 201 ERGLPG 206
>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)| Length = 867 Score = 27.7 bits (60), Expect = 7.6 Identities = 22/53 (41%), Positives = 27/53 (50%) Frame = +3 Query: 114 GSIRPSPGTPAVVPAASALTGAPSIRPPRGVWFGLWVGPSPRIHF*LDSRVPP 272 GS P+PG P PA SAL GAP + P R GP P++ +R PP Sbjct: 794 GSRGPAPGPP---PAGSALGGAPPV-PSRPGASPDPFGPPPQVPS-RPNRAPP 841
>TAF6_RAT (Q63801) Transcription initiation factor TFIID subunit 6| (Transcription initiation factor TFIID 70 kDa subunit) (TAF(II)70) (TAFII-70) (TAFII-80) (TAFII80) (p80) Length = 678 Score = 27.7 bits (60), Expect = 7.6 Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHA-AAGSTGPRS 169 +PSP PP S SP G G P A P A + TGP S Sbjct: 624 HPSPVPPSSSSPSPLGGSALCGGKQETGDSPPPAPGTPKANGSQPTGPSS 673
>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor| Length = 1797 Score = 27.7 bits (60), Expect = 7.6 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 13/65 (20%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGR---------DQPRAQTKPHAAAGSTGPR--SARTRRGL--LPGF 136 PA PG P G G+ + PR +T P G GP+ S + +G+ +PG Sbjct: 1464 PAGPPGGPGLRGPKGQQGEQGPKGPEGPRGETGPAGPQGPPGPQGPSGLSIQGMPGMPGD 1523 Query: 135 RGTDG 121 +G G Sbjct: 1524 KGDKG 1528
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 27.7 bits (60), Expect = 7.6 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 8/73 (10%) Frame = -3 Query: 306 PYPPHRE--SSSPAEGPGNP-AKNGSLG-----RDQPRAQTKPHAAAGSTGPRSARTRRG 151 P PP++E GP +P ++ G++G ++PR + A PR R ++ Sbjct: 1204 PLPPNKEPLKEKLISGPLSPMSRAGNMGVGMEDGERPRRRRHGRAQQQDKPPRFRRLKQD 1263 Query: 150 LLPGFRGTDGSIP 112 RGTDG P Sbjct: 1264 RENAARGTDGKPP 1276
>ATX2L_HUMAN (Q8WWM7) Ataxin-2-like protein (Ataxin-2 domain protein)| (Ataxin-2-related protein) Length = 1075 Score = 27.7 bits (60), Expect = 7.6 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAK--NGSLGRDQPRAQTKPHAAAGSTGP 175 P P H ++SSP GPG+ A+ NG R P+AQ A + P Sbjct: 380 PPRGPHHLDNSSP--GPGSEARGINGGPSRMSPKAQRPLRGAKTLSSP 425
>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 646 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/45 (35%), Positives = 19/45 (42%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTG 178 P P PP +PA NPA + P +T P AA S G Sbjct: 585 PPPPPPPPPPPAPAPAVNNPAGSVRKVAPPPPKRTTPQLAAPSGG 629
>AAC2_DICDI (P14196) AAC-rich mRNA clone AAC11 protein (Fragment)| Length = 448 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -1 Query: 311 HPPTLPTGNLVAPRRDPGIQLKMDPWGGTNPEPKPNP 201 +PP+ P + P+R G KMD G P+P P P Sbjct: 170 NPPSEPK-DTSGPKRKRGRPPKMDEEGNPQPKPVPQP 205
>XRCC1_HUMAN (P18887) DNA-repair protein XRCC1 (X-ray repair cross-complementing| protein 1) Length = 633 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -3 Query: 288 ESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSART 160 + +S + G G+ A L + QP+ +TKP AAG + P+ T Sbjct: 413 DEASHSGGSGDEAPK--LPQKQPQTKTKPTQAAGPSSPQKPPT 453
>SI1L3_HUMAN (O60292) Signal-induced proliferation-associated 1-like protein 3| (SPA-1-like protein 3) Length = 1781 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 9/44 (20%) Frame = -3 Query: 306 PYPPHRESSSPAEGPGNPAKNGSL---------GRDQPRAQTKP 202 P+PP ++PA G G P K ++ GRD+P + P Sbjct: 1593 PHPPVGPGATPAAGSGFPEKKSTISASELSLADGRDRPLRRLDP 1636
>LIPB_DEIRA (Q9RWA5) Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier| protein]-protein-N-lipoyltransferase) (Lipoate-protein ligase B) Length = 336 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -3 Query: 303 YPPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSAR 163 +P HR PG P+ +G+ P+ + +PH AAG G R+ R Sbjct: 54 WPGHRP-------PGLPSPTNRVGQSVPKWRPQPHKAAG--GGRTIR 91
>CSP_PLAVS (P13826) Circumsporozoite protein (CS) (Fragment)| Length = 343 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 202 PRGGRIDGAPVSADAAGTTAGVPGDGR 122 P G R DG P AAG AG DG+ Sbjct: 177 PAGDRADGQPAGDRAAGQPAGDRADGQ 203 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 202 PRGGRIDGAPVSADAAGTTAGVPGDGR 122 P G R DG P AAG AG DG+ Sbjct: 159 PAGDRADGQPAGDRAAGQPAGDRADGQ 185 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 202 PRGGRIDGAPVSADAAGTTAGVPGDGR 122 P G R DG P AAG AG DG+ Sbjct: 87 PAGDRADGQPAGDRAAGQPAGDRADGQ 113
>POL2_ARMVS (Q65030) RNA2 polyprotein (P2) [Contains: P2A protein (2A);| Movement protein (2B-MP); Coat protein (2C-CP)] Length = 1131 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = +3 Query: 174 GAPSIRPPRGVWF--GLWVGPSPRIHF*LDSRVPPRGY*IPGGE 299 G P + P R + GLW GPS R ++ LD R+ IP GE Sbjct: 358 GLPLLPPLRNAYAPRGLWRGPSTRANYTLDFRLNG----IPTGE 397
>LEG3_RAT (P08699) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) Length = 261 Score = 27.3 bits (59), Expect = 9.9 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 5/64 (7%) Frame = -3 Query: 285 SSSPAEGPGNPAKNGSLGRDQPRA---QTKPHAAAGSTGPRS--ARTRRGLLPGFRGTDG 121 +S P PG G G+ P A T P A G T P + T G PG G G Sbjct: 37 ASYPGAYPGQAPPGGYPGQAPPSAYPGPTGPSAYPGPTAPGAYPGPTAPGAFPGQPGGPG 96 Query: 120 SIPT 109 + P+ Sbjct: 97 AYPS 100
>FTWH_MYCTU (P63762) Hypothetical ftsW-like protein Rv2154c/MT2213| Length = 524 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/61 (29%), Positives = 21/61 (34%), Gaps = 7/61 (11%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGPGNPAKN-------GSLGRDQPRAQTKPHAAAGSTGPRSARTR 157 NP P +P PG PA+ GS P + H AG RTR Sbjct: 454 NPQPAQTQPARKTPRTAPGQPARQMGLPPRPGSPRTADPPVRRSVHHGAGQRYAGQRRTR 513 Query: 156 R 154 R Sbjct: 514 R 514
>FTWH_MYCBO (P63763) Hypothetical ftsW-like protein Mb2178c| Length = 524 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/61 (29%), Positives = 21/61 (34%), Gaps = 7/61 (11%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGPGNPAKN-------GSLGRDQPRAQTKPHAAAGSTGPRSARTR 157 NP P +P PG PA+ GS P + H AG RTR Sbjct: 454 NPQPAQTQPARKTPRTAPGQPARQMGLPPRPGSPRTADPPVRRSVHHGAGQRYAGQRRTR 513 Query: 156 R 154 R Sbjct: 514 R 514
>CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog| Length = 240 Score = 27.3 bits (59), Expect = 9.9 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 10/71 (14%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGP-GNPAKNGSLGR------DQPR---AQTKPHAAAGSTGPRSAR 163 P+P+PP S P GP P G + PR A T P AAAG GP + Sbjct: 85 PAPFPPSGPSCPPPGGPYPGPGPTGPYPTPNMPFPELPRPYGAPTDP-AAAGPLGPWGSM 143 Query: 162 TRRGLLPGFRG 130 + PG G Sbjct: 144 SSGPWAPGMGG 154
>TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 100 kDa subunit) (TAF(II)100) (TAFII-100) (TAFII100) Length = 801 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = -2 Query: 235 GEGPTQSPNQTPRGGRIDGAPVSADAAGTTAGVPGDG 125 GEG +PN P GG V+A AAG G P G Sbjct: 33 GEGSGGTPNNGPNGGGGGNVAVAA-AAGGDGGTPKPG 68
>CSP_PLAVB (P08677) Circumsporozoite protein precursor (CS)| Length = 378 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 202 PRGGRIDGAPVSADAAGTTAGVPGDGR 122 P G R DG P AAG AG DG+ Sbjct: 202 PAGDRADGQPAGDRAAGQPAGDRADGQ 228 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 202 PRGGRIDGAPVSADAAGTTAGVPGDGR 122 P G R DG P AAG AG DG+ Sbjct: 184 PAGDRADGQPAGDRAAGQPAGDRADGQ 210 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 202 PRGGRIDGAPVSADAAGTTAGVPGDGR 122 P G R DG P AAG AG DG+ Sbjct: 112 PAGDRADGQPAGDRAAGQPAGDRADGQ 138
>CSP_PLASI (Q03110) Circumsporozoite protein precursor (CS)| Length = 386 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 202 PRGGRIDGAPVSADAAGTTAGVPGDGR 122 P G R DG P AAG AG DG+ Sbjct: 130 PAGDRADGQPAGDRAAGQPAGDRADGQ 156
>HXA2_HUMAN (O43364) Homeobox protein Hox-A2| Length = 376 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSA 166 PP E + P+ PG+ ++G+ GR +P P + GS P A Sbjct: 49 PPPFEQTIPSLNPGSHPRHGAGGRPKP----SPAGSRGSPVPAGA 89
>CO4A2_CAEEL (P17140) Collagen alpha-2(IV) chain precursor (Lethal protein 2)| Length = 1758 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/62 (29%), Positives = 21/62 (33%), Gaps = 5/62 (8%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----LPGFRGTDGSIPTRAR 100 PG P G G P G+ GP + RGL +PG G G R Sbjct: 285 PGLPGMKGEKGLSGPAGPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGR 344 Query: 99 RG 94 G Sbjct: 345 DG 346
>ZN516_HUMAN (Q92618) Zinc finger protein 516| Length = 1163 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGST 181 PP + +S GPG+PA G L PR+ +P+ A +T Sbjct: 476 PPRKRAS----GPGDPAPAGHL---DPRSAARPNRRAAAT 508
>K1914_MOUSE (Q5DTU0) Protein KIAA1914| Length = 825 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/41 (36%), Positives = 16/41 (39%) Frame = +2 Query: 122 PSVPRNPGSSPRRVRADRGPVDPXXXXXXXXXXXXSLPKDP 244 P+V N GS P RV D PV SLP P Sbjct: 523 PAVDANSGSEPDRVYLDLTPVKSFLHSSSEAQAQASLPAVP 563
>COAT_BYDVN (P27578) Coat protein| Length = 204 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = -3 Query: 273 AEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGP-RSARTRRGLLP 142 + G G+ + + R +P A+T+P S GP R R RR + P Sbjct: 8 SNGNGSRRRRQRVARRRPAARTQPVVVVASNGPARRGRRRRPVGP 52
>LIPS_HUMAN (Q05469) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 1076 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/45 (28%), Positives = 18/45 (40%) Frame = -3 Query: 291 RESSSPAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTR 157 R + P GPG P P AQ KP A + P + ++ Sbjct: 134 RHVAQPGPGPGEPPPAQQEAESTPAAQAKPGAKREPSAPTESTSQ 178
>CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor| Length = 1028 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/53 (32%), Positives = 20/53 (37%) Frame = -3 Query: 276 PAEGPGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFRGTDGS 118 P PG G GR+ P AG GP+ R G PG G G+ Sbjct: 441 PRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEG-PPGSEGARGA 492
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 27.3 bits (59), Expect = 9.9 Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 5/63 (7%) Frame = -3 Query: 264 PGNPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRGL-----LPGFRGTDGSIPTRAR 100 PG P G G D G G + G+ LPG RG DG + Sbjct: 1130 PGQPGLEGECGEDGFPGSPGQPGYPGQQGREGEKGYPGIPGENGLPGLRGQDGQPGLKGE 1189 Query: 99 RGL 91 GL Sbjct: 1190 NGL 1192
>APD22_APIME (P35581) Apidaecins type 22 precursor [Contains: Apidaecin-1B| (Apidaecin IB); Apidaecin-1A (Apidaecin IA)] Length = 144 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 7/53 (13%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQP-------RAQTKPHAAAGSTGP 175 P P PPH AE P N + QP R + +P A G+ P Sbjct: 79 PQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRP 131 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 7/53 (13%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQP-------RAQTKPHAAAGSTGP 175 P P PPH AE P N + QP R + +P A G+ P Sbjct: 51 PQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRP 103
>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1874 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 9/53 (16%) Frame = -3 Query: 300 PPHRESSSPAEGPGNPAKNGSLGR---------DQPRAQTKPHAAAGSTGPRS 169 PP E + P NP + S G D P A KP + ST P S Sbjct: 659 PPTTELKPESSNPNNPNPSSSAGSNPPPKSSSSDNPPAPNKPTPTSSSTTPPS 711
>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 Length = 863 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRA-QTKPHAAAGSTGPR 172 P P PP A PG PA + PRA +T P+ GS R Sbjct: 735 PGPLPP-------AASPGPPAASPPAAPSSPRAPRTSPYGVPGSPATR 775
>HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) (Hyperpolarization-activated cation channel 1) (HAC-1) Length = 863 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Frame = -3 Query: 312 PSPYPPHRESSSPAEGPGNPAKNGSLGRDQPRA-QTKPHAAAGSTGPR 172 P P PP A PG PA + PRA +T P+ GS R Sbjct: 735 PGPLPP-------AASPGPPAASPPAAPSSPRAPRTSPYGVPGSPATR 775
>ATG1_PICAN (Q8TFN2) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)| (Autophagy-related protein 1) (Peroxisome degradation deficient protein 7) Length = 804 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/37 (32%), Positives = 18/37 (48%) Frame = -3 Query: 243 GSLGRDQPRAQTKPHAAAGSTGPRSARTRRGLLPGFR 133 G++ P T H+AA +GP +T+R P R Sbjct: 450 GAVAIPSPHLGTNEHSAANPSGPTETQTQRRFSPSSR 486
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -3 Query: 315 NPSPYPPHRESSSPAEGPG-NPAKNGSLGRDQPRAQTKPHAAAGSTGPRSARTRRG 151 +PSP P +S SP+E P P+ + S+ P + + + + P S+ ++ G Sbjct: 194 SPSPSPSLSKSPSPSESPSLAPSPSDSVASLAPSSSPSDESPSPAPSPSSSGSKGG 249 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.138 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,559,834 Number of Sequences: 219361 Number of extensions: 984025 Number of successful extensions: 5298 Number of sequences better than 10.0: 221 Number of HSP's better than 10.0 without gapping: 3591 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5122 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
