ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast39e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PAP3_ARATH (O82291) Probable plastid-lipid associated protein 3,... 30 1.9
2DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltrans... 29 2.4
3SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3... 29 3.2
4HIS2_THET2 (P62350) Histidine biosynthesis bifunctional protein ... 28 5.4
5HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1... 28 7.1
6SYV_BACHD (Q9K8G8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... 28 7.1

>PAP3_ARATH (O82291) Probable plastid-lipid associated protein 3, chloroplast|
           precursor (AtPap3) (Fibrillin 3)
          Length = 376

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
 Frame = +3

Query: 144 KTKVTLATFDLPYITFYYNQKLLLYRLAEGAGDFQDVTARMADALGDALAYFYPLAGR-- 317
           K  V  ++ DLP     + Q++ L  L +     QDV A ++ AL        P  G   
Sbjct: 282 KPPVIKSSVDLPESVGVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRG 341

Query: 318 ------------IRQEKGDGGALYVDGEEG 371
                       +R  +GDGG L+V   EG
Sbjct: 342 SSWLLTTYLDKDLRISRGDGG-LFVLAREG 370



to top

>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC|
           2.3.1.-) (DBTNBT)
          Length = 441

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 9/39 (23%)
 Frame = +3

Query: 270 DALGDALAYFYPLAGRIRQEK---------GDGGALYVD 359
           +AL   L Y++PLAGR+R ++         GD GAL+V+
Sbjct: 67  EALSKVLVYYFPLAGRLRSKEIGELEVECTGD-GALFVE 104



to top

>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)|
          Length = 474

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +3

Query: 159 LATFDLPYITFYYNQKLLLYRL----AEGAGDFQDVTARMADALGDALAYFYPLAGRI 320
           L+  D  +  +YY   +L Y      + G+ +  D    +  +L   L +FYP+AGR+
Sbjct: 32  LSLLDQCFPLYYYVPIILFYPATAANSTGSSNHHDDLDLLKSSLSKTLVHFYPMAGRM 89



to top

>HIS2_THET2 (P62350) Histidine biosynthesis bifunctional protein hisIE|
           [Includes: Phosphoribosyl-AMP cyclohydrolase (EC
           3.5.4.19) (PRA-CH); Phosphoribosyl-ATP pyrophosphatase
           (EC 3.6.1.31) (PRA-PH)]
          Length = 214

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 186 TFYYNQKLLLYRLAEGAGDFQDVTARMADALGDALAY 296
           TF+   +  L+R  E +G  Q+V   + D  GDA+ Y
Sbjct: 47  TFFSRSRQALWRKGETSGHTQEVVEVLLDCDGDAVVY 83



to top

>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1)
          Length = 445

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 8/42 (19%)
 Frame = +3

Query: 264 MADALGDALAYFYPLAGRIRQEKGD--------GGALYVDGE 365
           + +AL  AL  FYP+AGR++   GD         GAL+V+ E
Sbjct: 67  LIEALSKALVPFYPMAGRLK-INGDRYEIDCNAEGALFVEAE 107



to top

>SYV_BACHD (Q9K8G8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 880

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +3

Query: 147 TKVTLATFDLPYIT---FYYNQKLLLYRLAEGAGDFQDVTARMADALGDALAYFYPLAGR 317
           TK  L+  ++ Y     ++Y+ K   Y LA+G G  +  T R    LGD     +P   R
Sbjct: 185 TKTALSDIEVIYKDVQGYFYHMK---YPLADGDGAIEVATTRPETMLGDTAVAVHPEDER 241

Query: 318 IRQEKGDGGALYVDGEE 368
            +   G    L + G E
Sbjct: 242 YQHLIGKMVKLPITGRE 258


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,987,522
Number of Sequences: 219361
Number of extensions: 293465
Number of successful extensions: 939
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top