ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast39d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC124106.10| Mus musculus chromosome 5, clone RP24-299A7, com... 44 0.24
2gb|BC062969.1| Mus musculus polycystic kidney disease 2, mRNA (c... 44 0.24
3gb|BC053058.1| Mus musculus polycystic kidney disease 2, mRNA (c... 44 0.24
4gb|AC123753.7| Mus musculus chromosome 5, clone RP24-200E3, comp... 44 0.24
5gb|AC008507.11| Homo sapiens chromosome 19 clone CTC-448F2, comp... 44 0.24
6gb|AF242389.1|AF242389 Mus musculus autosomal dominant polycysti... 44 0.24
7emb|Y14105.1|MMY14105 Mus musculus pkd2 exon 1 and joined CDS 44 0.24
8gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.97
9gb|AC110054.4| Homo sapiens chromosome 15, clone CTD-2116N17, co... 42 0.97
10gb|AC100840.2| Homo sapiens chromosome 15, clone RP11-537K8, com... 42 0.97
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
13dbj|AB194139.1| Oryza sativa (japonica cultivar-group) OsRAD gen... 42 0.97
14dbj|AB158320.1| Oryza sativa (japonica cultivar-group) OsRAD mRN... 42 0.97
15dbj|AP006859.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
16gb|AY962310.1| Homo sapiens peptidylprolyl isomerase B (cyclophi... 42 0.97
17dbj|AK063534.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.97
18gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 0.97
19ref|XM_529922.1| PREDICTED: Pan troglodytes LOC455203 (LOC455203... 40 3.8
20ref|XM_466532.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.8
21ref|NM_204796.1| Gallus gallus neurogenin 2 (NGN2/ATH4A), mRNA 40 3.8
22ref|XM_479095.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.8
23ref|XM_472918.1| Oryza sativa (japonica cultivar-group), predic... 40 3.8
24gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequ... 40 3.8
25emb|AL079335.29|HSJ132F21 Human DNA sequence from clone RP1-132F... 40 3.8
26gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, com... 40 3.8
27emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,... 40 3.8
28gb|AC010635.6| Homo sapiens chromosome 5 clone CTD-2324F15, comp... 40 3.8
29dbj|AK090679.1| Homo sapiens cDNA FLJ33360 fis, clone BRACE2005253 40 3.8
30dbj|AK142118.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 40 3.8
31gb|AC016868.8| Homo sapiens chromosome 8, clone RP11-15G16, comp... 40 3.8
32ref|NM_001001702.1| Homo sapiens FLJ33360 protein (FLJ33360), mRNA 40 3.8
33gb|AF303000.1|AF303000 Gallus gallus neurogenin 2 gene, complete... 40 3.8
34dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
35dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
36dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
37dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
38dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 3.8
39dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
40dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
41emb|AJ012659.1|GGA012659 Gallus gallus ngn2/ath4a gene 40 3.8
42dbj|AK109152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.8
43gb|AF109014.1|AF109014 Gallus gallus neurogenin 2 mRNA, complete... 40 3.8
44dbj|AK073510.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.8
45emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 3.8
46gb|AF123884.1|AF123884 Gallus gallus neurogenin 2 mRNA, partial cds 40 3.8
47dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complet... 40 3.8
48emb|AL831753.5| Mouse DNA sequence from clone RP23-384M14 on chr... 40 3.8 
>gb|AC124106.10| Mus musculus chromosome 5, clone RP24-299A7, complete sequence
          Length = 167372

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 85    ggccgagggggcgggcggaggc 106
             ||||||||||||||||||||||
Sbjct: 27202 ggccgagggggcgggcggaggc 27181
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>gb|BC062969.1| Mus musculus polycystic kidney disease 2, mRNA (cDNA clone
           MGC:73490 IMAGE:6409512), complete cds
          Length = 3919

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  ggccgagggggcgggcggaggc 106
           ||||||||||||||||||||||
Sbjct: 72  ggccgagggggcgggcggaggc 93
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>gb|BC053058.1| Mus musculus polycystic kidney disease 2, mRNA (cDNA clone
           MGC:62348 IMAGE:6409512), complete cds
          Length = 3919

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  ggccgagggggcgggcggaggc 106
           ||||||||||||||||||||||
Sbjct: 72  ggccgagggggcgggcggaggc 93
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>gb|AC123753.7| Mus musculus chromosome 5, clone RP24-200E3, complete sequence
          Length = 167457

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 85    ggccgagggggcgggcggaggc 106
             ||||||||||||||||||||||
Sbjct: 27202 ggccgagggggcgggcggaggc 27181
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>gb|AC008507.11| Homo sapiens chromosome 19 clone CTC-448F2, complete sequence
          Length = 179005

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 94    ggcgggcggaggccgaagcggcgcgg 119
             ||||||||||||| ||||||||||||
Sbjct: 39658 ggcgggcggaggcggaagcggcgcgg 39633
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>gb|AF242389.1|AF242389 Mus musculus autosomal dominant polycystic kidney disease type 2
            protein gene, 5'-flanking region and partial cds
          Length = 3200

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 85   ggccgagggggcgggcggaggc 106
            ||||||||||||||||||||||
Sbjct: 2800 ggccgagggggcgggcggaggc 2821
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>emb|Y14105.1|MMY14105 Mus musculus pkd2 exon 1 and joined CDS
          Length = 843

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  ggccgagggggcgggcggaggc 106
           ||||||||||||||||||||||
Sbjct: 86  ggccgagggggcgggcggaggc 107
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>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01,
             complete sequence
          Length = 117724

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   gagcgcgcggaggcggagagg 180
             |||||||||||||||||||||
Sbjct: 27636 gagcgcgcggaggcggagagg 27656
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>gb|AC110054.4| Homo sapiens chromosome 15, clone CTD-2116N17, complete sequence
          Length = 164857

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 175    gagagggccaggcgtggtgac 195
              |||||||||||||||||||||
Sbjct: 140568 gagagggccaggcgtggtgac 140588
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>gb|AC100840.2| Homo sapiens chromosome 15, clone RP11-537K8, complete sequence
          Length = 174287

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   gagagggccaggcgtggtgac 195
             |||||||||||||||||||||
Sbjct: 17392 gagagggccaggcgtggtgac 17412
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 70       tcgccggcgaaacgaggccga 90
                |||||||||||||||||||||
Sbjct: 20089477 tcgccggcgaaacgaggccga 20089497
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 160      gagcgcgcggaggcggagagg 180
                |||||||||||||||||||||
Sbjct: 14298850 gagcgcgcggaggcggagagg 14298870
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>dbj|AB194139.1| Oryza sativa (japonica cultivar-group) OsRAD gene for putative
          nuclease, complete cds
          Length = 3960

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 70 tcgccggcgaaacgaggccga 90
          |||||||||||||||||||||
Sbjct: 24 tcgccggcgaaacgaggccga 44
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>dbj|AB158320.1| Oryza sativa (japonica cultivar-group) OsRAD mRNA for putative
          nuclease, complete cds
          Length = 2244

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 70 tcgccggcgaaacgaggccga 90
          |||||||||||||||||||||
Sbjct: 24 tcgccggcgaaacgaggccga 44
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>dbj|AP006859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
             fosmid clone:OSJNOa273B05
          Length = 41326

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 70    tcgccggcgaaacgaggccga 90
             |||||||||||||||||||||
Sbjct: 24403 tcgccggcgaaacgaggccga 24423
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>gb|AY962310.1| Homo sapiens peptidylprolyl isomerase B (cyclophilin B) (PPIB) gene,
            complete cds
          Length = 11340

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 175  gagagggccaggcgtggtgac 195
            |||||||||||||||||||||
Sbjct: 5454 gagagggccaggcgtggtgac 5474
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>dbj|AK063534.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B09,
          full insert sequence
          Length = 2252

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 70 tcgccggcgaaacgaggccga 90
          |||||||||||||||||||||
Sbjct: 52 tcgccggcgaaacgaggccga 72
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 155     cgcgcgagcgcgcggaggcgg 175
               |||||||||||||||||||||
Sbjct: 2022482 cgcgcgagcgcgcggaggcgg 2022462



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 155    cgcgcgagcgcgcggaggcgg 175
              |||||||||||||||||||||
Sbjct: 308643 cgcgcgagcgcgcggaggcgg 308663
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>ref|XM_529922.1| PREDICTED: Pan troglodytes LOC455203 (LOC455203), mRNA
          Length = 862

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  gccgagggggcgggcggagg 105
           ||||||||||||||||||||
Sbjct: 186 gccgagggggcgggcggagg 205
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>ref|XM_466532.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2561

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgcggcacgggagggcaggg 134
           ||||||||||||||||||||
Sbjct: 97  cgcggcacgggagggcaggg 116
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>ref|NM_204796.1| Gallus gallus neurogenin 2 (NGN2/ATH4A), mRNA
          Length = 1341

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgaggccgagggggcgggcg 101
           ||||||||||||||||||||
Sbjct: 187 cgaggccgagggggcgggcg 168
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>ref|XM_479095.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 342

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 10  caccgccgggccgacgggcaaggaggcgatgg 41
           |||||||| |||||||| || |||||||||||
Sbjct: 180 caccgccgcgccgacggccacggaggcgatgg 149
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>ref|XM_472918.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1050

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  gacgggcaaggaggcgatgg 41
           ||||||||||||||||||||
Sbjct: 309 gacgggcaaggaggcgatgg 290
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>gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequence
          Length = 157884

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    gaggcggcgcgggagaccag 235
              ||||||||||||||||||||
Sbjct: 130292 gaggcggcgcgggagaccag 130273
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>emb|AL079335.29|HSJ132F21 Human DNA sequence from clone RP1-132F21 on chromosome 20 Contains the
             5' end a novel gene, the C20orf118 gene, the 3' end of the
             SAMHD1 gene for SAM domain and HD domain 1 and a CpG
             island, complete sequence
          Length = 71117

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    cgaggccgagggggcgggcg 101
             ||||||||||||||||||||
Sbjct: 24719 cgaggccgagggggcgggcg 24700
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>gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, complete sequence
          Length = 175716

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   gcggatgggggtggtgtgga 254
             ||||||||||||||||||||
Sbjct: 81873 gcggatgggggtggtgtgga 81892
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>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
             complete sequence
          Length = 129498

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    gacgggcaaggaggcgatgg 41
             ||||||||||||||||||||
Sbjct: 71473 gacgggcaaggaggcgatgg 71492
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>gb|AC010635.6| Homo sapiens chromosome 5 clone CTD-2324F15, complete sequence
          Length = 81252

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   ggagagggccaggcgtggtg 193
             ||||||||||||||||||||
Sbjct: 65867 ggagagggccaggcgtggtg 65848
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>dbj|AK090679.1| Homo sapiens cDNA FLJ33360 fis, clone BRACE2005253
          Length = 2419

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 174  ggagagggccaggcgtggtg 193
            ||||||||||||||||||||
Sbjct: 1824 ggagagggccaggcgtggtg 1805
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>dbj|AK142118.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230040L03
           product:unclassifiable, full insert sequence
          Length = 698

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 82  cgaggccgagggggcgggcggagg 105
           |||||||| |||||||||||||||
Sbjct: 535 cgaggccgcgggggcgggcggagg 512
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>gb|AC016868.8| Homo sapiens chromosome 8, clone RP11-15G16, complete sequence
          Length = 155691

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    accagcggatgggggtggtg 250
              ||||||||||||||||||||
Sbjct: 104783 accagcggatgggggtggtg 104764
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>ref|NM_001001702.1| Homo sapiens FLJ33360 protein (FLJ33360), mRNA
          Length = 2419

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 174  ggagagggccaggcgtggtg 193
            ||||||||||||||||||||
Sbjct: 1824 ggagagggccaggcgtggtg 1805
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>gb|AF303000.1|AF303000 Gallus gallus neurogenin 2 gene, complete cds
          Length = 1880

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgaggccgagggggcgggcg 101
           ||||||||||||||||||||
Sbjct: 202 cgaggccgagggggcgggcg 183
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 22       gacgggcaaggaggcgatgg 41
                ||||||||||||||||||||
Sbjct: 24074494 gacgggcaaggaggcgatgg 24074513
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 10       caccgccgggccgacgggcaaggaggcgatgg 41
                |||||||| |||||||| || |||||||||||
Sbjct: 24752170 caccgccgcgccgacggccacggaggcgatgg 24752139
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      cgcggcacgggagggcaggg 134
                ||||||||||||||||||||
Sbjct: 23159589 cgcggcacgggagggcaggg 23159570
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>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1126_D09
          Length = 138615

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    cgcggcacgggagggcaggg 134
              ||||||||||||||||||||
Sbjct: 126627 cgcggcacgggagggcaggg 126608
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 147     gccgggaccgcgcgagcgcgcgga 170
               |||||| |||||||||||||||||
Sbjct: 3441046 gccgggcccgcgcgagcgcgcgga 3441069
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>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0040H10
          Length = 132919

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 10     caccgccgggccgacgggcaaggaggcgatgg 41
              |||||||| |||||||| || |||||||||||
Sbjct: 108107 caccgccgcgccgacggccacggaggcgatgg 108076
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>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1568_B05
          Length = 115325

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   cgcggcacgggagggcaggg 134
             ||||||||||||||||||||
Sbjct: 16820 cgcggcacgggagggcaggg 16801
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>emb|AJ012659.1|GGA012659 Gallus gallus ngn2/ath4a gene
          Length = 790

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgaggccgagggggcgggcg 101
           ||||||||||||||||||||
Sbjct: 202 cgaggccgagggggcgggcg 183
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>dbj|AK109152.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F11, full
           insert sequence
          Length = 1321

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  gacgggcaaggaggcgatgg 41
           ||||||||||||||||||||
Sbjct: 375 gacgggcaaggaggcgatgg 356
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>gb|AF109014.1|AF109014 Gallus gallus neurogenin 2 mRNA, complete cds
          Length = 1341

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgaggccgagggggcgggcg 101
           ||||||||||||||||||||
Sbjct: 187 cgaggccgagggggcgggcg 168
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>dbj|AK073510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046G18, full
           insert sequence
          Length = 2561

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgcggcacgggagggcaggg 134
           ||||||||||||||||||||
Sbjct: 97  cgcggcacgggagggcaggg 116
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>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete
             sequence
          Length = 90767

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    gacgggcaaggaggcgatgg 41
             ||||||||||||||||||||
Sbjct: 53332 gacgggcaaggaggcgatgg 53351
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>gb|AF123884.1|AF123884 Gallus gallus neurogenin 2 mRNA, partial cds
          Length = 770

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgaggccgagggggcgggcg 101
           ||||||||||||||||||||
Sbjct: 81  cgaggccgagggggcgggcg 62
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>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    gaggccgaagcggcgcggca 121
              ||||||||||||||||||||
Sbjct: 136843 gaggccgaagcggcgcggca 136862
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>emb|AL831753.5| Mouse DNA sequence from clone RP23-384M14 on chromosome 2, complete
              sequence
          Length = 180573

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 82     cgaggccgagggggcgggcggagg 105
              |||||||| |||||||||||||||
Sbjct: 125811 cgaggccgcgggggcgggcggagg 125834


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,821,873
Number of Sequences: 3902068
Number of extensions: 1821873
Number of successful extensions: 72612
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72029
Number of HSP's gapped (non-prelim): 583
length of query: 292
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 270
effective length of database: 17,147,199,772
effective search space: 4629743938440
effective search space used: 4629743938440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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