ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast39d07 |
|---|---|
| Clone Library Name | barley_pub |
>BT3L4_MOUSE (Q9CQH7) Transcription factor BTF3 homolog 4 (Basic transcription| factor 3-like 4) Length = 158 Score = 81.3 bits (199), Expect = 5e-16 Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 1/87 (1%) Frame = +3 Query: 90 MNKERLMKMXXXXXXXXXXXXXXXXXXXHKTATTDDKRLQSTLKRVGVNTIPAIEEVNIF 269 MN+E+L K+ H+TAT DDK+LQS+LK++ VN I IEEVN+ Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60 Query: 270 KDD-LVIQFLNPKVQASIAANTWVVSG 347 KDD VI F NPKVQAS++ANT+ ++G Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITG 87
>BT3L4_HUMAN (Q96K17) Transcription factor BTF3 homolog 4 (Basic transcription| factor 3-like 4) Length = 158 Score = 81.3 bits (199), Expect = 5e-16 Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 1/87 (1%) Frame = +3 Query: 90 MNKERLMKMXXXXXXXXXXXXXXXXXXXHKTATTDDKRLQSTLKRVGVNTIPAIEEVNIF 269 MN+E+L K+ H+TAT DDK+LQS+LK++ VN I IEEVN+ Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60 Query: 270 KDD-LVIQFLNPKVQASIAANTWVVSG 347 KDD VI F NPKVQAS++ANT+ ++G Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITG 87
>BTF3_HUMAN (P20290) Transcription factor BTF3 (RNA polymerase B transcription| factor 3) Length = 206 Score = 79.7 bits (195), Expect = 2e-15 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%) Frame = +3 Query: 90 MNKERLMKMXXXXXXXXXXXXXXXXXXXHKTATTDDKRLQSTLKRVGVNTIPAIEEVNIF 269 MN+E+L K+ H+TAT DDK+LQ +LK++GVN I IEEVN+F Sbjct: 50 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 109 Query: 270 KDD-LVIQFLNPKVQASIAANTWVVSGTPQT 359 + VI F NPKVQAS+AANT+ ++G +T Sbjct: 110 TNQGTVIHFNNPKVQASLAANTFTITGHAET 140
>BTF3_MOUSE (Q64152) Transcription factor BTF3 (RNA polymerase B transcription| factor 3) Length = 204 Score = 79.7 bits (195), Expect = 2e-15 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%) Frame = +3 Query: 90 MNKERLMKMXXXXXXXXXXXXXXXXXXXHKTATTDDKRLQSTLKRVGVNTIPAIEEVNIF 269 MN+E+L K+ H+TAT DDK+LQ +LK++GVN I IEEVN+F Sbjct: 48 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 107 Query: 270 KDD-LVIQFLNPKVQASIAANTWVVSGTPQT 359 + VI F NPKVQAS+AANT+ ++G +T Sbjct: 108 TNQGTVIHFNNPKVQASLAANTFTITGHAET 138
>BTF3_CAEEL (Q18885) Transcription factor BTF3 homolog (Inhibitor of cell death| 1) Length = 161 Score = 73.9 bits (180), Expect = 9e-14 Identities = 37/60 (61%), Positives = 45/60 (75%), Gaps = 1/60 (1%) Frame = +3 Query: 174 HKTATTDDKRLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFLNPKVQASIAANTWVVSGT 350 HKTA DDK+LQS LK++ V IP IEEVN+ KDD VI F NPKVQ S+ ANT+ V+G+ Sbjct: 36 HKTAAADDKKLQSNLKKLSVTNIPGIEEVNMIKDDGTVIHFNNPKVQTSVPANTFSVTGS 95
>BT3L3_HUMAN (Q13892) Transcription factor BTF3 homolog 3 (Basic transcription| factor 3-like 3) Length = 214 Score = 65.1 bits (157), Expect = 4e-11 Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 1/59 (1%) Frame = +3 Query: 174 HKTATTDDKRLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFLNPKVQASIAANTWVVSG 347 H+TAT DDK+LQ +LK++ VN I IE+VN+F + VI F NPK QAS+A NT+ ++G Sbjct: 64 HRTATADDKKLQFSLKKLQVNNISGIEKVNMFTNQGTVIHFNNPKFQASLAVNTFTITG 122
>BT3L1_HUMAN (Q13890) Transcription factor BTF3 homolog 1 (Basic transcription| factor 3-like 1) Length = 111 Score = 64.3 bits (155), Expect = 7e-11 Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 1/59 (1%) Frame = +3 Query: 186 TTDDKRLQSTLKRVGVNTIPAIEEVNIF-KDDLVIQFLNPKVQASIAANTWVVSGTPQT 359 T +DK+ Q +LK++GVN IP IEEVN+F VI F NP+VQAS+AANT+ ++G +T Sbjct: 34 TAEDKKFQFSLKKLGVNNIPGIEEVNMFTHQGTVIHFNNPEVQASLAANTFTMTGHAET 92
>BTF3_SCHPO (Q92371) Transcription factor BTF3 homolog| Length = 151 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Frame = +3 Query: 183 ATTDDKRLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFLNPKVQASIAANTWVVSG 347 + DDK++Q LK++ + + I+EVN+FK+D VI F P V +S+ T + G Sbjct: 34 SAADDKKVQGALKKLNMQNLAGIQEVNMFKEDGGVINFRAPTVHSSLPNETTAIYG 89
>EGD1_YEAST (Q02642) BTF3 homolog EGD1 (GAL4 DNA-binding enhancer protein 1)| Length = 157 Score = 40.4 bits (93), Expect = 0.001 Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +3 Query: 183 ATTDDKRLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFLNPKVQASIAANTWVVSGTPQ 356 A DD +LQS L ++ TI + E N FKDD V+ F VQ + NT V G PQ Sbjct: 37 ANKDDTKLQSQLAKLHAVTIDNVAEANFFKDDGKVMHFNKVGVQVAAQHNTSVFYGLPQ 95
>BT3L2_HUMAN (Q13891) Transcription factor BTF3 homolog 2 (Basic transcription| factor 3-like 2) Length = 67 Score = 33.1 bits (74), Expect = 0.17 Identities = 21/66 (31%), Positives = 33/66 (50%) Frame = +3 Query: 90 MNKERLMKMXXXXXXXXXXXXXXXXXXXHKTATTDDKRLQSTLKRVGVNTIPAIEEVNIF 269 MN+E+L K+ H+TAT +DK+ Q +LK++ I IEEVN+F Sbjct: 6 MNQEKLAKLQAKVPIGGTAHRKKVV---HRTATANDKKRQFSLKKL---EISGIEEVNMF 59 Query: 270 KDDLVI 287 + + Sbjct: 60 TNQATV 65
>KAD2_SYNY3 (P72641) Probable adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP| transphosphorylase 2) Length = 181 Score = 30.4 bits (67), Expect = 1.1 Identities = 10/45 (22%), Positives = 24/45 (53%) Frame = +3 Query: 225 VGVNTIPAIEEVNIFKDDLVIQFLNPKVQASIAANTWVVSGTPQT 359 +G+ P +E ++ D ++I+F+ ++ W++ G P+T Sbjct: 45 LGIKAKPYVERGDLLPDPMMIEFIQQRLVQEDGGQGWILEGYPRT 89
>CITG_KLEPN (P45414) 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase| (EC 2.7.8.25) (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase) Length = 302 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +3 Query: 207 QSTLKRVGVNTIPAIEEVNIFKDDLVIQFLNPKVQASIAANTWVVSGTP 353 Q L + GV +E + F D+L+ + L+P A + A TW +S P Sbjct: 247 QRLLWQGGVLADGGLEALRQFDDELIARHLSPGGSADLLAVTWFLSAFP 295
>DCE2_ARATH (Q42472) Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2)| Length = 494 Score = 29.3 bits (64), Expect = 2.5 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 10/64 (15%) Frame = +3 Query: 177 KTATTDD--------KRLQSTLKR--VGVNTIPAIEEVNIFKDDLVIQFLNPKVQASIAA 326 KTAT D+ + +++TL + +G N+IP I KD+L++ NP++ + Sbjct: 5 KTATNDESVCTMFGSRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDG-NPRLNLASFV 63 Query: 327 NTWV 338 TW+ Sbjct: 64 TTWM 67
>KAD2_ANASP (Q8Z0M3) Probable adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP| transphosphorylase 2) Length = 184 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/50 (24%), Positives = 28/50 (56%) Frame = +3 Query: 210 STLKRVGVNTIPAIEEVNIFKDDLVIQFLNPKVQASIAANTWVVSGTPQT 359 S L +G + P + + + D+++I+ + +++ S + WV+ G P+T Sbjct: 40 SHLSELGRHAQPYMIKGELVPDEMIIELIRLRLKKSDVIDGWVLEGYPRT 89
>NTRB_KLEOX (P06218) Nitrogen regulation protein ntrB (EC 2.7.13.3)| Length = 349 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +3 Query: 213 TLKRVGVNTIPAIEEVNIFKDDLVIQFLNPKVQASIAANTWVVSGTP 353 TL G I + + DDL + + NP Q +A ++ + GTP Sbjct: 5 TLPDAGQILNSLINSILLVDDDLAVHYANPAAQQLLAQSSRKLFGTP 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,102,934 Number of Sequences: 219361 Number of extensions: 317851 Number of successful extensions: 1041 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1027 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1034 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
