ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast39b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DBNL_MOUSE (Q62418) Drebrin-like protein (SH3 domain-containing ... 30 2.2
2PCE_TACTR (P21902) Proclotting enzyme precursor (EC 3.4.21.86) [... 28 8.4
3DBNL_RAT (Q9JHL4) Drebrin-like protein (SH3 domain-containing pr... 28 8.4

>DBNL_MOUSE (Q62418) Drebrin-like protein (SH3 domain-containing protein 7)|
           (Actin-binding protein 1)
          Length = 436

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +3

Query: 114 RQRDSRRSRELPTPARKEQTTME--RNGGAPAP 206
           R  + RR REL   AR+EQ   E  R+ GAP+P
Sbjct: 204 RLEEERRERELQEAARREQRYQEQHRSAGAPSP 236



to top

>PCE_TACTR (P21902) Proclotting enzyme precursor (EC 3.4.21.86) [Contains:|
           Proclotting enzyme light chain; Proclotting enzyme heavy
           chain]
          Length = 375

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -3

Query: 96  HSSTTSNVMGGSEALVSYYSWLT 28
           H++TT+ ++GG EA +  + W+T
Sbjct: 121 HNTTTTRIIGGREAPIGAWPWMT 143



to top

>DBNL_RAT (Q9JHL4) Drebrin-like protein (SH3 domain-containing protein 7)|
          Length = 436

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 114 RQRDSRRSRELPTPARKEQTTME--RNGGAPAP 206
           R  + RR REL   AR+EQ   E  R+ G P+P
Sbjct: 204 RLEEERRERELQEAARREQRYQEQHRSAGPPSP 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,112,880
Number of Sequences: 219361
Number of extensions: 513288
Number of successful extensions: 1154
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top