>CUTS_STRLI (P0A4I8) Sensor protein cutS (EC 2.7.13.3)|
          Length = 414

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -1

Query: 340 PPGCGPAETYSTWPRSVHPGSECRPTMRVLFTFL 239
           PPG  P  T+   PRS  P    RPT+R+  T L
Sbjct: 7   PPGAPPKPTWD--PRSATPLPWLRPTIRIRLTLL 38

>CUTS_STRCO (P0A4I7) Sensor protein cutS (EC 2.7.13.3)|
          Length = 414

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -1

Query: 340 PPGCGPAETYSTWPRSVHPGSECRPTMRVLFTFL 239
           PPG  P  T+   PRS  P    RPT+R+  T L
Sbjct: 7   PPGAPPKPTWD--PRSATPLPWLRPTIRIRLTLL 38

>DPOL_EHV1V (Q6S6P1) DNA polymerase (EC 2.7.7.7)|
          Length = 1220

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 385 PRRSACTPCGTAKNMPPGCGPAETYSTWPRSVHPGSECRP 266
           P+ S CT  G+ K + P C   E  +   R VH G+  RP
Sbjct: 42  PQHSYCTEVGSFKFIAPRCLDEEAPADQRRGVHVGTLERP 81

>DPOL_EHV1B (P28858) DNA polymerase (EC 2.7.7.7)|
          Length = 1220

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 385 PRRSACTPCGTAKNMPPGCGPAETYSTWPRSVHPGSECRP 266
           P+ S CT  G+ K + P C   E  +   R VH G+  RP
Sbjct: 42  PQHSYCTEVGSFKFIAPRCLDEEAPADQRRGVHVGTLERP 81

>NAPA_DESDE (P81186) Periplasmic nitrate reductase precursor (EC 1.7.99.4)|
          Length = 755

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 334 GCGPAETYSTWPRSVHPGSECRPTMRVLFTF 242
           GCG    YS   ++V P  +CRPT+  L  F
Sbjct: 504 GCGERR-YSLTEKAVDPPGQCRPTVNTLVEF 533

>APBB2_MOUSE (Q9DBR4) Amyloid beta A4 precursor protein-binding family B member|
           2
          Length = 760

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 215 ERQLRDGAEEGEQDPHRGPALAAGVD 292
           E QLR  AE+G+QDP++  + AA ++
Sbjct: 104 ENQLRKAAEQGQQDPNKNLSPAAVIN 129

>LYAM3_BOVIN (P42201) P-selectin precursor (Granule membrane protein 140)|
           (GMP-140) (PADGEM) (Leukocyte-endothelial cell adhesion
           molecule 3) (LECAM3) (CD62P antigen)
          Length = 646

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -1

Query: 385 PRRSACTPCGTAKNMPPGCGPAETYSTWPRSVHPGSECRPTM 260
           P R  CTP G     PP C   +T S    +  PG +C PT+
Sbjct: 425 PERLDCTPSGHWTGSPPTCEEVDTVS----APAPGVQC-PTL 461

>WDR6_HUMAN (Q9NNW5) WD-repeat protein 6|
          Length = 1121

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 195 DAEGLLMNGNFETAPRKVNKTLIVGR-HSLPGWTLRGHVEYVSAGPQPGGM 344
           + EG +      T    V++TL  G+ HSL  W LRG+ E +     PGG+
Sbjct: 412 NGEGRVKVVPINTPTAAVDQTLFPGKVHSL-SWALRGYEELLLLASGPGGV 461


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.121    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,277,722
Number of Sequences: 219361
Number of extensions: 559753
Number of successful extensions: 2131
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2130
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)