ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast38e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
2dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
3dbj|AK066979.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
4gb|AY104226.1| Zea mays PCO060710 mRNA sequence 68 2e-08
5dbj|AB016064.1| Zea mays mRNA for mitochondrial phosphate transp... 68 2e-08
6ref|XM_467970.1| Oryza sativa (japonica cultivar-group), mRNA 66 7e-08
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 66 7e-08
8dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic D... 66 7e-08
9dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic D... 66 7e-08
10dbj|AK069611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 7e-08
11dbj|AB016065.1| Oryza sativa (japonica cultivar-group) mRNA for ... 66 7e-08
12ref|XM_462662.1| Oryza sativa (japonica cultivar-group), predic... 46 0.069
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.069
14dbj|AK105021.2| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.069
15dbj|AK069397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.069
16emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 46 0.069
17gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.1
18dbj|AK071044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
19emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4,... 42 1.1
20gb|BC017454.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA... 40 4.2
21gb|BC022334.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA... 40 4.2
22ref|XM_752711.1| Ustilago maydis 521 hypothetical protein (UM016... 40 4.2
23gb|BC047763.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA... 40 4.2
24gb|BC008183.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA... 40 4.2
25gb|BC002516.2| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA... 40 4.2
26emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 4.2
27dbj|AK094291.1| Homo sapiens cDNA FLJ36972 fis, clone BRACE2006245 40 4.2
28gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 4.2
29ref|NM_014595.1| Homo sapiens 5', 3'-nucleotidase, cytosolic (NT... 40 4.2
30tpg|BK000192.1| TPA: TPA_exp: Homo sapiens cytosolic 5'(3')-deox... 40 4.2
31gb|AC022211.5|AC022211 Homo sapiens BAC clone RP11-649A18 from 1... 40 4.2
32gb|AF154829.2|AF154829 Homo sapiens deoxy-5'-nucleotidase mRNA, ... 40 4.2
33dbj|AK000419.1| Homo sapiens cDNA FLJ20412 fis, clone KAT02154 40 4.2
34gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 4.2
35gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 40 4.2 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                          
Query: 81      cggcggcgatggcgctctccgacctctcccgcgactcgctcct 123
               |||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 5649173 cggcggcgatggcgctctccgaccgctcccgcgagtcgctcct 5649215



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                           
Query: 278     gcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321
               |||||||  ||||| ||||  |||||||||||||| ||||||||
Sbjct: 5649343 gcgcccagggagaagatcgagatgtactcgccggcgttctacgc 5649386
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>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0021C04
          Length = 162115

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 81    cggcggcgatggcgctctccgacctctcccgcgactcgctcct 123
             |||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 41320 cggcggcgatggcgctctccgaccgctcccgcgagtcgctcct 41362



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 278   gcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321
             |||||||  ||||| ||||  |||||||||||||| ||||||||
Sbjct: 41490 gcgcccagggagaagatcgagatgtactcgccggcgttctacgc 41533
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>dbj|AK066979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090N24, full
           insert sequence
          Length = 1410

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 81  cggcggcgatggcgctctccgacctctcccgcgactcgctcct 123
           |||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 79  cggcggcgatggcgctctccgaccgctcccgcgagtcgctcct 121



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 278 gcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321
           |||||||  ||||| ||||  |||||||||||||| ||||||||
Sbjct: 249 gcgcccagggagaagatcgagatgtactcgccggcgttctacgc 292
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>gb|AY104226.1| Zea mays PCO060710 mRNA sequence
          Length = 1639

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 85  ggcgatggcgctctccgacctctcccgcgactcgctcctccc 126
           |||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 137 ggcgatggcgctctccgaccgctcccgcgagtcgctcctccc 178



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 266 ttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttcta 318
           ||||||||||  |||||||| ||||| ||||  ||||||||||||||||||||
Sbjct: 291 ttctcgatccaggcgcccaaggagaagatcgagatgtactcgccggccttcta 343
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>dbj|AB016064.1| Zea mays mRNA for mitochondrial phosphate transporter, complete cds
          Length = 1444

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 85  ggcgatggcgctctccgacctctcccgcgactcgctcctccc 126
           |||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 45  ggcgatggcgctctccgaccgctcccgcgagtcgctcctccc 86



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 266 ttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttcta 318
           ||||||||||  |||||||| ||||| ||||  ||||||||||||||||||||
Sbjct: 199 ttctcgatccaggcgcccaaggagaagatcgagatgtactcgccggccttcta 251
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>ref|XM_467970.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1612

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 86  gcgatggcgctctccgacctctcccgcgactcgctcctccc 126
           ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 174 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 214



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 262 gcccttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321
           |||| |||||||||  || ||||  ||||| ||||  |||||||||||||| ||||||||
Sbjct: 326 gcccatctcgatccaggctcccagggagaagatcgagatgtactcgccggcgttctacgc 385
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                         
Query: 86       gcgatggcgctctccgacctctcccgcgactcgctcctccc 126
                ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 32341653 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 32341613



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                            
Query: 262      gcccttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321
                |||| |||||||||  || ||||  ||||| ||||  |||||||||||||| ||||||||
Sbjct: 32341501 gcccatctcgatccaggctcccagggagaagatcgagatgtactcgccggcgttctacgc 32341442
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>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A11
          Length = 132352

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                       
Query: 86     gcgatggcgctctccgacctctcccgcgactcgctcctccc 126
              ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 117485 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 117445



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                          
Query: 262    gcccttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321
              |||| |||||||||  || ||||  ||||| ||||  |||||||||||||| ||||||||
Sbjct: 117333 gcccatctcgatccaggctcccagggagaagatcgagatgtactcgccggcgttctacgc 117274
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>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1767_D02
          Length = 139145

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 86   gcgatggcgctctccgacctctcccgcgactcgctcctccc 126
            ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 3166 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 3126



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 262  gcccttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321
            |||| |||||||||  || ||||  ||||| ||||  |||||||||||||| ||||||||
Sbjct: 3014 gcccatctcgatccaggctcccagggagaagatcgagatgtactcgccggcgttctacgc 2955
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>dbj|AK069611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022H13, full
           insert sequence
          Length = 1612

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 86  gcgatggcgctctccgacctctcccgcgactcgctcctccc 126
           ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 174 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 214



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 262 gcccttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321
           |||| |||||||||  || ||||  ||||| ||||  |||||||||||||| ||||||||
Sbjct: 326 gcccatctcgatccaggctcccagggagaagatcgagatgtactcgccggcgttctacgc 385
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>dbj|AB016065.1| Oryza sativa (japonica cultivar-group) mRNA for mitochondrial
           phosphate transporter, complete cds
          Length = 1552

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 86  gcgatggcgctctccgacctctcccgcgactcgctcctccc 126
           ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 139 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 179
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>ref|XM_462662.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1083

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 299 atgtactcgccggccttctacgc 321
           |||||||||||||||||||||||
Sbjct: 190 atgtactcgccggccttctacgc 212
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 299      atgtactcgccggccttctacgc 321
                |||||||||||||||||||||||
Sbjct: 22337278 atgtactcgccggccttctacgc 22337300



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 77       ggcccggcggcgatggcgctc 97
                |||||||||||||||||||||
Sbjct: 23498208 ggcccggcggcgatggcgctc 23498188
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>dbj|AK105021.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E02, full
           insert sequence
          Length = 1772

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 299 atgtactcgccggccttctacgc 321
           |||||||||||||||||||||||
Sbjct: 388 atgtactcgccggccttctacgc 410
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>dbj|AK069397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012A09, full
           insert sequence
          Length = 1703

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 299 atgtactcgccggccttctacgc 321
           |||||||||||||||||||||||
Sbjct: 251 atgtactcgccggccttctacgc 273
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
             complete sequence
          Length = 147214

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 299   atgtactcgccggccttctacgc 321
             |||||||||||||||||||||||
Sbjct: 88182 atgtactcgccggccttctacgc 88204
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 100    cgacctctcccgcgactcgct 120
              |||||||||||||||||||||
Sbjct: 285209 cgacctctcccgcgactcgct 285229
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>dbj|AK071044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081F09, full
           insert sequence
          Length = 1809

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 77  ggcccggcggcgatggcgctc 97
           |||||||||||||||||||||
Sbjct: 97  ggcccggcggcgatggcgctc 117
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>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21,
             complete sequence
          Length = 139298

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 77    ggcccggcggcgatggcgctc 97
             |||||||||||||||||||||
Sbjct: 54111 ggcccggcggcgatggcgctc 54091
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>gb|BC017454.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone
          MGC:20429 IMAGE:4647090), complete cds
          Length = 1004

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 76 cggcccggcggcgatggcgc 95
          ||||||||||||||||||||
Sbjct: 41 cggcccggcggcgatggcgc 60
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>gb|BC022334.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone
          MGC:22779 IMAGE:4703567), complete cds
          Length = 930

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 76 cggcccggcggcgatggcgc 95
          ||||||||||||||||||||
Sbjct: 23 cggcccggcggcgatggcgc 42
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>ref|XM_752711.1| Ustilago maydis 521 hypothetical protein (UM01657.1) partial mRNA
          Length = 5787

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 62   gcgcccggatctctcggccc 81
            ||||||||||||||||||||
Sbjct: 4126 gcgcccggatctctcggccc 4145
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>gb|BC047763.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone
          IMAGE:6201042), with apparent retained intron
          Length = 1343

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 76 cggcccggcggcgatggcgc 95
          ||||||||||||||||||||
Sbjct: 30 cggcccggcggcgatggcgc 49
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>gb|BC008183.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone
          MGC:16998 IMAGE:4183256), complete cds
          Length = 994

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 76 cggcccggcggcgatggcgc 95
          ||||||||||||||||||||
Sbjct: 24 cggcccggcggcgatggcgc 43
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>gb|BC002516.2| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone
          IMAGE:3140193), partial cds
          Length = 907

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 76 cggcccggcggcgatggcgc 95
          ||||||||||||||||||||
Sbjct: 18 cggcccggcggcgatggcgc 37
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>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 74     ctcggcccggcggcgatggcgctc 97
              ||||||||||| ||||||||||||
Sbjct: 224856 ctcggcccggccgcgatggcgctc 224833
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>dbj|AK094291.1| Homo sapiens cDNA FLJ36972 fis, clone BRACE2006245
          Length = 2161

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  cggcccggcggcgatggcgc 95
           ||||||||||||||||||||
Sbjct: 838 cggcccggcggcgatggcgc 819
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    tcggcccggcggcgatggcgctct 98
             |||||||||||||||| |||||||
Sbjct: 37337 tcggcccggcggcgattgcgctct 37360
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>ref|NM_014595.1| Homo sapiens 5', 3'-nucleotidase, cytosolic (NT5C), mRNA
          Length = 970

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 76 cggcccggcggcgatggcgc 95
          ||||||||||||||||||||
Sbjct: 63 cggcccggcggcgatggcgc 82
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>tpg|BK000192.1| TPA: TPA_exp: Homo sapiens cytosolic 5'(3')-deoxyribonucleotidase
          (NT5C) gene, complete cds
          Length = 1554

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 76 cggcccggcggcgatggcgc 95
          ||||||||||||||||||||
Sbjct: 63 cggcccggcggcgatggcgc 82
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>gb|AC022211.5|AC022211 Homo sapiens BAC clone RP11-649A18 from 17, complete sequence
          Length = 191155

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    cggcccggcggcgatggcgc 95
             ||||||||||||||||||||
Sbjct: 21381 cggcccggcggcgatggcgc 21362
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>gb|AF154829.2|AF154829 Homo sapiens deoxy-5'-nucleotidase mRNA, complete cds
          Length = 970

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 76 cggcccggcggcgatggcgc 95
          ||||||||||||||||||||
Sbjct: 63 cggcccggcggcgatggcgc 82
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>dbj|AK000419.1| Homo sapiens cDNA FLJ20412 fis, clone KAT02154
          Length = 970

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 76 cggcccggcggcgatggcgc 95
          ||||||||||||||||||||
Sbjct: 63 cggcccggcggcgatggcgc 82
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 80      ccggcggcgatggcgctctccgac 103
               |||||||||||||||||| |||||
Sbjct: 2689174 ccggcggcgatggcgctcgccgac 2689151
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>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    cgcgcccaacgagaaaatcg 296
              ||||||||||||||||||||
Sbjct: 138460 cgcgcccaacgagaaaatcg 138441


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 670,903
Number of Sequences: 3902068
Number of extensions: 670903
Number of successful extensions: 22110
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21848
Number of HSP's gapped (non-prelim): 262
length of query: 321
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 299
effective length of database: 17,147,199,772
effective search space: 5127012731828
effective search space used: 5127012731828
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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