ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast38d09 |
|---|---|
| Clone Library Name | barley_pub |
>LEUD2_THEMA (Q9WZ25) 3-isopropylmalate dehydratase small subunit 2 (EC| 4.2.1.33) (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) Length = 166 Score = 35.4 bits (80), Expect = 0.033 Identities = 17/34 (50%), Positives = 23/34 (67%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRK 345 +G+ FV GDN++TD+IIPA +L S P E K Sbjct: 6 KGKVFVFGDNVNTDEIIPARYLN--TSDPQELAK 37
>LEUD_AQUAE (O67399) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 168 Score = 35.0 bits (79), Expect = 0.043 Identities = 18/35 (51%), Positives = 22/35 (62%) Frame = +1 Query: 241 FQGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRK 345 F+G + GDN+DTDQIIPA +L S P E K Sbjct: 5 FRGRVWKFGDNVDTDQIIPARYLN--TSDPYELAK 37
>LEUD1_METKA (Q8TX94) 3-isopropylmalate dehydratase small subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 170 Score = 34.7 bits (78), Expect = 0.056 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRK 345 +G +V GD+IDTDQIIP +LT P+E K Sbjct: 6 RGRAWVFGDDIDTDQIIPGRYLT--TQDPEELAK 37
>LEUD2_METKA (Q8TW31) 3-isopropylmalate dehydratase small subunit 2 (EC| 4.2.1.33) (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) Length = 168 Score = 33.9 bits (76), Expect = 0.095 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +1 Query: 241 FQGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFVG 369 + G V GD++DTDQIIP L V Y +LG +A G Sbjct: 3 WSGRAHVFGDDVDTDQIIPGRCLRRV-----SYDELGRYAMTG 40
>LEUD_CLOAB (Q97EE1) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 163 Score = 32.0 bits (71), Expect = 0.36 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = +1 Query: 247 GECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRK 345 G+ GDNIDTD IIPA +L S P+E K Sbjct: 5 GDVLKYGDNIDTDVIIPARYLN--TSVPEELAK 35
>LEUD1_PYRAB (Q9UZ06) 3-isopropylmalate dehydratase small subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 164 Score = 31.6 bits (70), Expect = 0.47 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRK 345 +G + GDNIDTD IIPA +L S P E K Sbjct: 4 RGRAWKYGDNIDTDVIIPARYLN--TSDPKELAK 35
>LEUD2_METJA (Q58673) 3-isopropylmalate dehydratase small subunit 2 (EC| 4.2.1.33) (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) Length = 168 Score = 31.2 bits (69), Expect = 0.62 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFVG 369 +G + G+N+DTD I+PA + LV +KP+E L F G Sbjct: 6 KGRVWKFGNNVDTDAILPARY--LVYTKPEE---LAQFVMTG 42
>LEUD_THETN (Q8RDK1) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 161 Score = 30.8 bits (68), Expect = 0.80 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHL 309 QG+ GDNIDTD IIPA L Sbjct: 2 QGKAIKYGDNIDTDVIIPARFL 23
>LEUD1_PYRFU (Q8U2A0) 3-isopropylmalate dehydratase small subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 164 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHL 309 +G + GDNIDTD IIPA +L Sbjct: 4 RGRAWKYGDNIDTDVIIPARYL 25
>LEUD_PYRAE (Q8ZW36) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 161 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHL 309 +G V GD IDTD IIPA++L Sbjct: 4 RGRALVYGDKIDTDVIIPAKYL 25
>LEUD_LACLA (Q02144) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 191 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHLTLVPSK 327 V+ DNIDTDQIIP + L + K Sbjct: 14 VMNDNIDTDQIIPKQFLKAIDKK 36
>LEUD_STRT2 (Q5M407) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 196 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHLTLVPSK 327 ++ DNIDTDQI+P + L L+ K Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKK 36
>LEUD_STRT1 (Q5LZF5) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 196 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHLTLVPSK 327 ++ DNIDTDQI+P + L L+ K Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKK 36
>LEUD_STRMU (Q8DTG5) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 196 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHLTLVPSK 327 ++ DNIDTDQI+P + L L+ K Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKK 36
>LEUD_STRGN (Q9AIM2) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 196 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHLTLVPSK 327 ++ DNIDTDQI+P + L L+ K Sbjct: 14 LMNDNIDTDQILPKQFLKLIDKK 36
>LEUD_STAEQ (Q5HMF6) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 189 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +1 Query: 268 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 348 DNIDTDQIIP HL V P DE+R L Sbjct: 19 DNIDTDQIIPKVHLKRVSKSGFGPFAFDEWRYL 51
>LEUD_HELHP (Q7VH32) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 165 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHLTLVPSK 327 QG GDN+DTD IIPA +L K Sbjct: 4 QGFVHKYGDNVDTDVIIPARYLNTADHK 31
>LEUD_STAAW (Q8NVI9) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +1 Query: 268 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 348 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_STAAS (Q6G7P8) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +1 Query: 268 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 348 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_STAAR (Q6GF13) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +1 Query: 268 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 348 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_STAAN (P65280) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +1 Query: 268 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 348 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_STAAM (P65279) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +1 Query: 268 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 348 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_STAAC (Q5HEE1) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 190 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +1 Query: 268 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 348 DNIDTDQIIP HL + P DE+R L Sbjct: 20 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 52
>LEUD_STAS1 (Q49Z15) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 191 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +1 Query: 268 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 348 DNIDTDQIIP HL + P DE+R L Sbjct: 19 DNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYL 51
>LEUD_STAHJ (Q4L7U3) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 191 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +1 Query: 268 DNIDTDQIIPAEHLTLV------PSKPDEYRKL 348 DNIDTDQIIP HL + P DE+R L Sbjct: 19 DNIDTDQIIPKVHLKRITKSGFGPFAFDEWRYL 51
>RIMM_DESVH (Q72DU2) Probable 16S rRNA-processing protein rimM| Length = 176 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Frame = +1 Query: 139 QAAPRHPATVSLRCHRSRPLTAAAATGDSPSSAAFQGECFVVGDN----IDTDQI 291 +AAPR S+R H+ RPL D ++ +G +V ++ +D D++ Sbjct: 44 RAAPRPVKVQSMRMHKGRPLVIFEGVNDRTAAELLRGHVMLVPEDTLPELDEDEV 98
>LEUD_SYNY3 (P74207) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 200 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHLTLV 318 +VGD+IDTD+IIPA L V Sbjct: 14 LVGDDIDTDRIIPARFLRCV 33
>ERBB3_MOUSE (Q61526) Receptor tyrosine-protein kinase erbB-3 precursor (EC| 2.7.10.1) (c-erbB3) (Glial growth factor receptor) Length = 1339 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/35 (37%), Positives = 25/35 (71%) Frame = -1 Query: 284 SVSMLSPTTKHSPWNAADDGESPVAAAAVRGRERW 180 S S+LSP++ + P N ++ GE+ + +A + GRE++ Sbjct: 1041 SQSLLSPSSGYMPMNQSNLGEACLDSAVLGGREQF 1075
>LEUD_BACCR (Q81G09) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 194 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAF 363 ++ DNIDTDQIIP ++L K E G F F Sbjct: 15 LMNDNIDTDQIIPKQYL-----KRIERTGFGKFLF 44
>APGM2_METTH (O26518) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase 2 (EC 5.4.2.1) (Phosphoglyceromutase 2) (BPG-independent PGAM 2) (aPGAM 2) Length = 402 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/61 (24%), Positives = 23/61 (37%) Frame = +1 Query: 133 RIQAAPRHPATVSLRCHRSRPLTAAAATGDSPSSAAFQGECFVVGDNIDTDQIIPAEHLT 312 RI P HP + +R H P+ C + GD +D DQ+ + T Sbjct: 333 RIAVLPDHPTPIEIRTHVPDPVP-----------------CILAGDGVDADQVKSYDEFT 375 Query: 313 L 315 + Sbjct: 376 V 376
>LEUD_BACHK (Q6HLF0) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 193 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAF 363 ++ DNIDTDQIIP ++L K E G F F Sbjct: 14 LMNDNIDTDQIIPKQYL-----KRIERTGFGKFLF 43
>LEUD_BACCZ (Q63DX5) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 193 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAF 363 ++ DNIDTDQIIP ++L K E G F F Sbjct: 14 LMNDNIDTDQIIPKQYL-----KRIERTGFGKFLF 43
>LEUD_BACAN (Q81T65) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 193 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAF 363 ++ DNIDTDQIIP ++L K E G F F Sbjct: 14 LMNDNIDTDQIIPKQYL-----KRIERTGFGKFLF 43
>ERBB3_RAT (Q62799) Receptor tyrosine-protein kinase erbB-3 precursor (EC| 2.7.10.1) (c-erbB3) Length = 1339 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/35 (37%), Positives = 24/35 (68%) Frame = -1 Query: 284 SVSMLSPTTKHSPWNAADDGESPVAAAAVRGRERW 180 S S+LSP++ + P N + GE+ + +A + GRE++ Sbjct: 1041 SQSLLSPSSGYMPMNQSSLGEACLDSAVLGGREQF 1075
>LEUD_BACC1 (Q73B97) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 193 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHL 309 ++ DNIDTDQIIP ++L Sbjct: 14 LMNDNIDTDQIIPKQYL 30
>LEUD1_METTH (O26917) 3-isopropylmalate dehydratase small subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 170 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHL 309 +G + GDN+DTD IIP +L Sbjct: 6 RGRVWRFGDNVDTDMIIPGRYL 27
>LEUD_SULTO (Q974Q9) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 168 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 11/45 (24%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHL-----------TLVPSKPDEYRK 345 +G+ GD IDTD IIPA +L + P P+ Y+K Sbjct: 4 EGKVLKFGDKIDTDIIIPARYLKYTDPQYLAQHAMEPLDPEFYKK 48
>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)| (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2377 Score = 28.1 bits (61), Expect = 5.2 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Frame = +1 Query: 139 QAAPRHPATVSLRCHRSRPLTAAAAT--GDSPSSAAFQGECFVVGDNIDTDQIIPAEHLT 312 Q+AP P HR LTA A+ PS+AA GE VVG T Sbjct: 111 QSAPPEP-------HREETLTATVASQVSQQPSAAASPGEQAVVG-----------SATT 152 Query: 313 LVPSKPDEYRKLGSFAFVG 369 VPS + R + + VG Sbjct: 153 TVPSSTSKDRPVSQPSLVG 171
>LEUD_ANASP (Q8YX03) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 202 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/20 (55%), Positives = 17/20 (85%) Frame = +1 Query: 259 VVGDNIDTDQIIPAEHLTLV 318 +VG++IDTD+IIPA +L + Sbjct: 15 LVGNDIDTDRIIPARYLKAI 34
>LEUD2_DEIRA (Q9RTI0) 3-isopropylmalate dehydratase small subunit 2 (EC| 4.2.1.33) (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) Length = 208 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = +1 Query: 268 DNIDTDQIIPAEHLT 312 D+I+TD+IIPA HLT Sbjct: 10 DHINTDEIIPARHLT 24
>LEUD_SULAC (Q4JC10) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 161 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 11/41 (26%) Frame = +1 Query: 265 GDNIDTDQIIPAEHL-----------TLVPSKPDEYRKLGS 354 GD IDTD IIPA++L + P P+ Y+K S Sbjct: 11 GDKIDTDIIIPAKYLKYTDPQYLAQHAMEPLDPEFYKKASS 51
>WNK1_RAT (Q9JIH7) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)| (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2126 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 7/72 (9%) Frame = +1 Query: 139 QAAPRHPATVSLRCHRSRPLTAAAAT--GDSPSSAAFQGECFVVGDNI-----DTDQIIP 297 Q+AP P HR LTA A+ PS+AA GE VVG T + P Sbjct: 111 QSAPPEP-------HREETLTATVASQVSQQPSAAASPGEQAVVGSATATVPSSTSKDRP 163 Query: 298 AEHLTLVPSKPD 333 +LV SK + Sbjct: 164 VSQPSLVGSKEE 175
>EHD2_HUMAN (Q9NZN4) EH-domain-containing protein 2| Length = 543 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 250 ECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSF 357 +CFV + DT+ +P L + P KP +RKL F Sbjct: 95 DCFVAVMHGDTEGTVPGNALVVDPDKP--FRKLNPF 128
>SPL8_ARATH (Q8GXL3) Squamosa promoter-binding-like protein 8| Length = 333 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/44 (29%), Positives = 21/44 (47%) Frame = +1 Query: 109 PGRAPTRARIQAAPRHPATVSLRCHRSRPLTAAAATGDSPSSAA 240 P + +A + P T+SL C R R A++ S SS++ Sbjct: 282 PNDSGVKASSSPSSNAPPTISLECFRQRQFQTTASSSTSASSSS 325
>LEUD_SULSO (Q97VY3) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 165 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 11/45 (24%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHL-----------TLVPSKPDEYRK 345 +G GD IDTD IIPA +L + P P+ Y+K Sbjct: 4 EGPVIKFGDKIDTDIIIPARYLKYTDPQYLAQHVMEPLDPEFYKK 48
>AA2BR_CHICK (O13076) Adenosine A2b receptor (Adenosine receptor 2b)| Length = 340 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -1 Query: 344 LRYSSGLDGTRVRCSAGMIWSVSMLSPTTKHSPWNAADDG 225 LRY+S + G R R ++W +S + T WN A G Sbjct: 109 LRYNSLVTGKRARGLIAVLWLLSFVIGLTPLMGWNKAMSG 148
>LEUD_WOLSU (Q7M887) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 167 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHL 309 QG+ + G+NIDTD II A +L Sbjct: 5 QGKVWKFGENIDTDLIIAARYL 26
>SERC_ACIAD (Q6F961) Phosphoserine aminotransferase (EC 2.6.1.52) (PSAT)| Length = 359 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/44 (27%), Positives = 20/44 (45%) Frame = -1 Query: 290 IWSVSMLSPTTKHSPWNAADDGESPVAAAAVRGRERWHLSETVA 159 IWS L ++ N + G S A++ + W+LS+ A Sbjct: 100 IWSEKALKEAQRYGDINVIEAGTSIDGKLAIKNQSEWNLSQDAA 143
>LEUD2_METAC (Q8TU71) 3-isopropylmalate dehydratase small subunit 2 (EC| 4.2.1.33) (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) Length = 162 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 244 QGECFVVGDNIDTDQIIPAEHLTLVPSKPDEYRKLGSFAFVGL 372 +G + GD++DTD +IP + L+ + P E L + F G+ Sbjct: 2 EGRAWKFGDDVDTDAVIPGRY--LIFNTPGE---LAKYTFEGV 39
>HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-) (Protein| pam/highwire/rpm-1) Length = 5233 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 5/40 (12%) Frame = -1 Query: 293 MIWSVSMLSPTTKHSPWNAADDG-----ESPVAAAAVRGR 189 M W VS L+PT H P ++ E PVA + GR Sbjct: 4070 MWWFVSSLNPTGGHQPVERGEEASEPALEHPVAYTQISGR 4109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,289,394 Number of Sequences: 219361 Number of extensions: 700445 Number of successful extensions: 2563 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 2514 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2562 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
