ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast38c11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472726.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 289 bits (146), Expect = 4e-75 Identities = 188/202 (93%) Strand = Plus / Plus Query: 233 caagaagtcgtggatccccgcgttcaaaagcgatgccgagttcatcaacccgtcctggct 292 |||||||||||||||||| || ||||| ||||| |||||||||||||||||| | ||||| Sbjct: 141 caagaagtcgtggatcccggccttcaagagcgacgccgagttcatcaacccgccgtggct 200 Query: 293 cgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggc 352 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 201 cgatggctcgctccccggtgacttcggcttcgacccgctggggctgggcaaggacccggc 260 Query: 353 gttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggt 412 |||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 261 gttcctcaagtggtacagggaggcggagctgatccacgggcggtgggcgatggcggcggt 320 Query: 413 gctgggcatcttcatcgggcag 434 |||||| |||||| |||||||| Sbjct: 321 gctggggatcttcgtcgggcag 342 Score = 119 bits (60), Expect = 8e-24 Identities = 81/88 (92%) Strand = Plus / Plus Query: 84 atggcgctcgcctccacctccgccaccgcctccgcggccgtgctcaagaacccgttcctc 143 ||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| Sbjct: 1 atggcgctcgcctccacctccgccaccgcgtccgcggccgtgctcaagacgcccttcctc 60 Query: 144 ggcgcgaggcgtgcgctcgccaatgccg 171 || |||| ||| |||||||||||||||| Sbjct: 61 ggggcgaagcgcgcgctcgccaatgccg 88
>dbj|AK104811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G02, full insert sequence Length = 1138 Score = 289 bits (146), Expect = 4e-75 Identities = 188/202 (93%) Strand = Plus / Plus Query: 233 caagaagtcgtggatccccgcgttcaaaagcgatgccgagttcatcaacccgtcctggct 292 |||||||||||||||||| || ||||| ||||| |||||||||||||||||| | ||||| Sbjct: 203 caagaagtcgtggatcccggccttcaagagcgacgccgagttcatcaacccgccgtggct 262 Query: 293 cgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggc 352 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 263 cgatggctcgctccccggtgacttcggcttcgacccgctggggctgggcaaggacccggc 322 Query: 353 gttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggt 412 |||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 323 gttcctcaagtggtacagggaggcggagctgatccacgggcggtgggcgatggcggcggt 382 Query: 413 gctgggcatcttcatcgggcag 434 |||||| |||||| |||||||| Sbjct: 383 gctggggatcttcgtcgggcag 404 Score = 123 bits (62), Expect = 5e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 82 ccatggcgctcgcctccacctccgccaccgcctccgcggccgtgctcaagaacccgttcc 141 ||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| Sbjct: 61 ccatggcgctcgcctccacctccgccaccgcgtccgcggccgtgctcaagacgcccttcc 120 Query: 142 tcggcgcgaggcgtgcgctcgccaatgccg 171 |||| |||| ||| |||||||||||||||| Sbjct: 121 tcggggcgaagcgcgcgctcgccaatgccg 150
>dbj|AK066070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055K10, full insert sequence Length = 1144 Score = 289 bits (146), Expect = 4e-75 Identities = 188/202 (93%) Strand = Plus / Plus Query: 233 caagaagtcgtggatccccgcgttcaaaagcgatgccgagttcatcaacccgtcctggct 292 |||||||||||||||||| || ||||| ||||| |||||||||||||||||| | ||||| Sbjct: 204 caagaagtcgtggatcccggccttcaagagcgacgccgagttcatcaacccgccgtggct 263 Query: 293 cgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggc 352 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 264 cgatggctcgctccccggtgacttcggcttcgacccgctggggctgggcaaggacccggc 323 Query: 353 gttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggt 412 |||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||| Sbjct: 324 gttcctcaagtggtacagggaggcggagctgatccacgggcggtgggcgatggcggcggt 383 Query: 413 gctgggcatcttcatcgggcag 434 |||||| |||||| |||||||| Sbjct: 384 gctggggatcttcgtcgggcag 405 Score = 115 bits (58), Expect = 1e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 82 ccatggcgctcgcctccacctccgccaccgcctccgcggccgtgctcaagaacccgttcc 141 ||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| Sbjct: 62 ccatggcgctcgcctccacctccgccaccgcgtccgcggccgtgctcaagacgcccttcc 121 Query: 142 tcggcgcgaggcgtgcgctcgccaatgccg 171 |||| | || ||| |||||||||||||||| Sbjct: 122 tcggggggaagcgcgcgctcgccaatgccg 151
>gb|AY103838.1| Zea mays PCO113775 mRNA sequence Length = 958 Score = 258 bits (130), Expect = 1e-65 Identities = 225/256 (87%), Gaps = 3/256 (1%) Strand = Plus / Plus Query: 182 cgccgccaagcccgtgacacgccgcgtggtggtcgtcgccgc---ggccgccgacaagaa 238 |||||||||||||| | | ||||||| | ||||||||||||| |||||||| |||||| Sbjct: 141 cgccgccaagcccgcgcctcgccgcgcgctggtcgtcgccgccgcggccgccgccaagaa 200 Query: 239 gtcgtggatccccgcgttcaaaagcgatgccgagttcatcaacccgtcctggctcgatgg 298 |||||||||||| || |||| ||||| |||||| || | |||||| |||||||||| || Sbjct: 201 gtcgtggatcccggccatcaagagcgacgccgagatcgtgaacccgccctggctcgacgg 260 Query: 299 ctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcct 358 |||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 261 ctcgctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcct 320 Query: 359 caagtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctggg 418 |||||||||| ||||||| || |||||||||||||| ||||||||||| || |||||||| Sbjct: 321 caagtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctggg 380 Query: 419 catcttcatcgggcag 434 ||||||| | |||||| Sbjct: 381 catcttcgtggggcag 396 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 114 tccgcggccgtgctcaagaacccgttcctcggcgcgaggcgtgcgctcgccaatgccgcc 173 ||||| ||||||||||||| |||||||||||| || ||||| |||||||||||||||||| Sbjct: 85 tccgctgccgtgctcaagaccccgttcctcggggccaggcgcgcgctcgccaatgccgcc 144
>gb|U23190.1|ZMU23190 Zea mays chlorophyll a/b-binding apoprotein CP24 (Lhcb6-1) mRNA, complete cds Length = 1040 Score = 252 bits (127), Expect = 8e-64 Identities = 202/227 (88%) Strand = Plus / Plus Query: 208 tggtggtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatg 267 |||| |||| |||||||||||||| |||||||||||||||||| || |||| ||||| | Sbjct: 133 tggtcgtcgccgccgcggccgccgccaagaagtcgtggatcccggccatcaagagcgacg 192 Query: 268 ccgagttcatcaacccgtcctggctcgatggctcgctccccggtgacttcggcttcgacc 327 ||||| || | |||||| |||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 193 ccgagatcgtgaacccgccctggctcgacggctcgctccccggcgacttcgggttcgacc 252 Query: 328 ccctggggcttggcaaggacccggcgttcctcaagtggtacagggaggccgacctgatcc 387 | |||||||| |||||||||||||||||||||||||||||| ||||||| ||| |||||| Sbjct: 253 cgctggggctgggcaaggacccggcgttcctcaagtggtaccgggaggcggacgtgatcc 312 Query: 388 acgggcgctgggcgatggccgcggtgctgggcatcttcatcgggcag 434 ||||||| ||||||||||| || ||||||||||||||| | |||||| Sbjct: 313 acgggcggtgggcgatggcggccgtgctgggcatcttcgtggggcag 359 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 114 tccgcggccgtgctcaagaacccgttcctcggcgcgaggcgtgcgctcgccaatgccgcc 173 ||||| ||||||||||||| |||||||||||| || ||||| |||||||||||||||||| Sbjct: 49 tccgctgccgtgctcaaga-cccgttcctcggggccaggcgcgcgctcgccaatgccgcc 107
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 200 bits (101), Expect = 3e-48 Identities = 125/133 (93%) Strand = Plus / Minus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 20208 gctccccggtgacttcggcttcgacccgctggggctgggcaaggacccggcgttcctcaa 20149 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||||||||||| || |||||||||||||| ||||||||||| ||||||||||| || Sbjct: 20148 gtggtacagggaggcggagctgatccacgggcggtgggcgatggcggcggtgctggggat 20089 Query: 422 cttcatcgggcag 434 |||| |||||||| Sbjct: 20088 cttcgtcgggcag 20076 Score = 123 bits (62), Expect = 5e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 82 ccatggcgctcgcctccacctccgccaccgcctccgcggccgtgctcaagaacccgttcc 141 ||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| Sbjct: 20529 ccatggcgctcgcctccacctccgccaccgcgtccgcggccgtgctcaagacgcccttcc 20470 Query: 142 tcggcgcgaggcgtgcgctcgccaatgccg 171 |||| |||| ||| |||||||||||||||| Sbjct: 20469 tcggggcgaagcgcgcgctcgccaatgccg 20440 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 233 caagaagtcgtggatccccgcgttcaaaagcgatgccgagttcatcaacccgtcctggct 292 |||||||||||||||||| || ||||| ||||| |||||||||||||||||| | ||||| Sbjct: 20387 caagaagtcgtggatcccggccttcaagagcgacgccgagttcatcaacccgccgtggct 20328 Query: 293 cgatggctcg 302 |||||||||| Sbjct: 20327 cgatggctcg 20318
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 200 bits (101), Expect = 3e-48 Identities = 125/133 (93%) Strand = Plus / Minus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 22811433 gctccccggtgacttcggcttcgacccgctggggctgggcaaggacccggcgttcctcaa 22811374 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||||||||||| || |||||||||||||| ||||||||||| ||||||||||| || Sbjct: 22811373 gtggtacagggaggcggagctgatccacgggcggtgggcgatggcggcggtgctggggat 22811314 Query: 422 cttcatcgggcag 434 |||| |||||||| Sbjct: 22811313 cttcgtcgggcag 22811301 Score = 123 bits (62), Expect = 5e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 82 ccatggcgctcgcctccacctccgccaccgcctccgcggccgtgctcaagaacccgttcc 141 ||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| Sbjct: 22811754 ccatggcgctcgcctccacctccgccaccgcgtccgcggccgtgctcaagacgcccttcc 22811695 Query: 142 tcggcgcgaggcgtgcgctcgccaatgccg 171 |||| |||| ||| |||||||||||||||| Sbjct: 22811694 tcggggcgaagcgcgcgctcgccaatgccg 22811665 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 233 caagaagtcgtggatccccgcgttcaaaagcgatgccgagttcatcaacccgtcctggct 292 |||||||||||||||||| || ||||| ||||| |||||||||||||||||| | ||||| Sbjct: 22811612 caagaagtcgtggatcccggccttcaagagcgacgccgagttcatcaacccgccgtggct 22811553 Query: 293 cgatggctcg 302 |||||||||| Sbjct: 22811552 cgatggctcg 22811543 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 tcgcctccacctccgccaccgcctc 115 ||||||||||||||||| ||||||| Sbjct: 19376949 tcgcctccacctccgcctccgcctc 19376925 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccgcggccg 123 |||||||||| ||||||||||| |||| |||| Sbjct: 21794312 cgcctccaccgccgccaccgccaccgccgccg 21794281 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 88 cgctcgcctccacctccgccaccgcctc 115 ||||||||||| |||||||| ||||||| Sbjct: 20223284 cgctcgcctcctcctccgccgccgcctc 20223257 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cctccgccaccgcctccgcg 119 |||||||||||||||||||| Sbjct: 10852426 cctccgccaccgcctccgcg 10852407 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 88 cgctcgcctccacctccgccaccgcctc 115 ||||||||||| |||||||| ||||||| Sbjct: 5743074 cgctcgcctcctcctccgccgccgcctc 5743047
>dbj|AK108672.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H08, full insert sequence Length = 1377 Score = 200 bits (101), Expect = 3e-48 Identities = 125/133 (93%) Strand = Plus / Minus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 588 gctccccggtgacttcggcttcgacccgctggggctgggcaaggacccggcgttcctcaa 529 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||||||||||| || |||||||||||||| ||||||||||| ||||||||||| || Sbjct: 528 gtggtacagggaggcggagctgatccacgggcggtgggcgatggcggcggtgctggggat 469 Query: 422 cttcatcgggcag 434 |||| |||||||| Sbjct: 468 cttcgtcgggcag 456 Score = 123 bits (62), Expect = 5e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 82 ccatggcgctcgcctccacctccgccaccgcctccgcggccgtgctcaagaacccgttcc 141 ||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||| Sbjct: 909 ccatggcgctcgcctccacctccgccaccgcgtccgcggccgtgctcaagacgcccttcc 850 Query: 142 tcggcgcgaggcgtgcgctcgccaatgccg 171 |||| |||| ||| |||||||||||||||| Sbjct: 849 tcggggcgaagcgcgcgctcgccaatgccg 820 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 233 caagaagtcgtggatccccgcgttcaaaagcgatgccgagttcatcaacccgtcctggct 292 |||||||||||||||||| || ||||| ||||| |||||||||||||||||| | ||||| Sbjct: 767 caagaagtcgtggatcccggccttcaagagcgacgccgagttcatcaacccgccgtggct 708 Query: 293 cgatggctcg 302 |||||||||| Sbjct: 707 cgatggctcg 698
>gb|DQ427744.1| Sorghum propinquum locus HHU11 genomic sequence Length = 757 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 262 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 321 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 322 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 381 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 382 cttcgtggggcag 394 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427743.1| Sorghum bicolor voucher PI585454 locus HHU11 genomic sequence Length = 755 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 260 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 319 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 320 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 379 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 380 cttcgtggggcag 392 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427742.1| Sorghum bicolor voucher PI267539 locus HHU11 genomic sequence Length = 755 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 260 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 319 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 320 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 379 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 380 cttcgtggggcag 392 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427741.1| Sorghum bicolor voucher PI267408 locus HHU11 genomic sequence Length = 761 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427740.1| Sorghum bicolor voucher PI221607 locus HHU11 genomic sequence Length = 761 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427739.1| Sorghum bicolor voucher PI152702 locus HHU11 genomic sequence Length = 761 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427738.1| Sorghum bicolor voucher NSL92371 locus HHU11 genomic sequence Length = 761 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427737.1| Sorghum bicolor voucher NSL87902b locus HHU11 genomic sequence Length = 761 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427735.1| Sorghum bicolor voucher NSL87666 locus HHU11 genomic sequence Length = 761 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427733.1| Sorghum bicolor voucher NSL77034 locus HHU11 genomic sequence Length = 755 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 260 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 319 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 320 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 379 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 380 cttcgtggggcag 392 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427732.1| Sorghum bicolor voucher NSL56174 locus HHU11 genomic sequence Length = 761 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427729.1| Sorghum bicolor voucher NSL51030 locus HHU11 genomic sequence Length = 761 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427728.1| Sorghum bicolor voucher NSL50875 locus HHU11 genomic sequence Length = 761 Score = 168 bits (85), Expect = 1e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctgggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427736.1| Sorghum bicolor voucher NSL87902a locus HHU11 genomic sequence Length = 761 Score = 161 bits (81), Expect = 2e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctaggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427734.1| Sorghum bicolor voucher NSL77217 locus HHU11 genomic sequence Length = 761 Score = 161 bits (81), Expect = 2e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctaggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427731.1| Sorghum bicolor voucher NSL55243 locus HHU11 genomic sequence Length = 761 Score = 161 bits (81), Expect = 2e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctaggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>gb|DQ427730.1| Sorghum bicolor voucher NSL51365 locus HHU11 genomic sequence Length = 761 Score = 161 bits (81), Expect = 2e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 302 gctccccggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaa 361 ||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 266 gctccccggcgacttcgggttcgacccgctggggctgggcaaggacccggcgttcctcaa 325 Query: 362 gtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtgctgggcat 421 ||||||| ||||||| || |||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 326 gtggtaccgggaggcggagctgatccacgggcggtgggcgatggcggccgtgctaggcat 385 Query: 422 cttcatcgggcag 434 |||| | |||||| Sbjct: 386 cttcgtggggcag 398 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgacaagaagtcgtggatccccgcgttcaaaagcgatgccgag 272 ||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 43 gtcgtcgccgcggtcgcccccaagaagtcgtggatccccgccttcaagagcgacgccgag 102 Query: 273 ttcatcaacccgtcctggctcgatggctcg 302 |||||||||||| | |||||||| |||||| Sbjct: 103 ttcatcaacccgccatggctcgacggctcg 132
>emb|BX813594.1|CNS0ADNW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 950 Score = 73.8 bits (37), Expect = 4e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 286 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 345 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 346 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 405 Query: 408 gcggtgctgggcatcttcatcgggcagcc 436 ||||| || || |||||| |||| ||||| Sbjct: 406 gcggttcttgggatcttcgtcggccagcc 434
>ref|NM_101450.3| Arabidopsis thaliana LHCB6; chlorophyll binding AT1G15820 (LHCB6) mRNA, complete cds Length = 1439 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 319 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 378 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 379 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 438 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 439 gcggttcttgggatcttcgtcgg 461
>gb|BT015552.1| Arabidopsis thaliana At1g15820 mRNA sequence Length = 705 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 142 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 201 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 202 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 261 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 262 gcggttcttgggatcttcgtcgg 284
>gb|AY081644.1| Arabidopsis thaliana chlorophyll A-B binding protein (At1g15820) mRNA, complete cds Length = 877 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 214 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 273 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 274 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 333 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 334 gcggttcttgggatcttcgtcgg 356
>gb|AY065113.1| Arabidopsis thaliana Lhcb6 protein (At1g15820; F7H2.16) mRNA, complete cds Length = 997 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 306 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 365 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 366 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 425 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 426 gcggttcttgggatcttcgtcgg 448
>gb|AF332425.1| Arabidopsis thaliana clone C00095 (e) putative chlorophyll binding protein (At1g15820) mRNA, complete cds Length = 777 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 214 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 273 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 274 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 333 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 334 gcggttcttgggatcttcgtcgg 356
>emb|BX814656.1|CNS0ADQI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 969 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 281 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 340 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 341 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 400 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 401 gcggttcttgggatcttcgtcgg 423
>emb|BX814290.1|CNS0ADTW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 937 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 285 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 344 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 345 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 404 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 405 gcggttcttgggatcttcgtcgg 427
>emb|BX813718.1|CNS0ADUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 268 tggctcgatggctcgctaccaggagaattcgggttcgacccattgggtttggggaaagac 327 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 328 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 387 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 388 gcggttcttgggatcttcgtcgg 410
>emb|BX815381.1|CNS0AD00 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 917 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 286 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 345 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 346 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 405 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 406 gcggttcttgggatcttcgtcgg 428
>emb|BX815093.1|CNS0AD0B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZG02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 974 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 288 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 347 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 348 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 407 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 408 gcggttcttgggatcttcgtcgg 430
>emb|BX815610.1|CNS0ACW7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS77ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 947 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 303 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 362 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 363 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 422 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 423 gcggttcttgggatcttcgtcgg 445
>emb|BX815230.1|CNS0ACSL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZD05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 915 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 252 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 311 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 312 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 371 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 372 gcggttcttgggatcttcgtcgg 394
>gb|AF134130.1| Arabidopsis thaliana Lhcb6 protein (Lhcb6) mRNA, complete cds Length = 960 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| || || || ||||| |||||||| |||| | || || ||| Sbjct: 295 tggctcgatggctcgctaccaggagatttcgggttcgacccattgggtttggggaaagac 354 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| ||||| || |||||||| || || ||||||||||| Sbjct: 355 ccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatggca 414 Query: 408 gcggtgctgggcatcttcatcgg 430 ||||| || || |||||| |||| Sbjct: 415 gcggttcttgggatcttcgtcgg 437
>gb|AY641832.1| Brassica rapa subsp. pekinensis Lhcb6 protein mRNA, partial cds Length = 856 Score = 67.9 bits (34), Expect = 3e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||||||||||||||| ||||| || ||||| || ||||| |||| | || |||||| Sbjct: 203 tggctcgatggctcgctacccggagatttcgggtttgacccgttgggtttaggaaaggac 262 Query: 348 ccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggcc 407 ||||| || || || |||||||| || || || ||||||||||| | ||||||||||| Sbjct: 263 ccggcttttcttaaatggtacagagaagcagagctgatccacggcagatgggcgatggca 322 Query: 408 gcggtgctgggcatcttc 425 ||||| || || |||||| Sbjct: 323 gcggttcttgggatcttc 340
>gb|AY928939.1| Fragaria x ananassa chloroplast chlorophyll a/b-binding protein CP24 precursor, mRNA, partial cds; nuclear gene for chloroplast product Length = 441 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 354 ttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatggccgcggtg 413 ||||||||||||||||| || || || |||||||||||||| ||||| ||| | |||||| Sbjct: 4 ttcctcaagtggtacagagaagctgagctgatccacgggcggtgggcaatgacagcggtg 63 Query: 414 ctgggcatctt 424 | |||||||| Sbjct: 64 gttggcatctt 74
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 306 cccggtgacttcggcttcgaccccctggg 334 ||||||||||||||||||||||||||||| Sbjct: 396 cccggtgacttcggcttcgaccccctggg 424
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1062 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 249 ctccccggcgacttcggcttcgaccccctggg 280
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1059 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 250 ctccccggcgacttcggcttcgaccccctggg 281
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1058 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 252 ctccccggcgacttcggcttcgaccccctggg 283
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 255 ctccccggcgacttcggcttcgaccccctggg 286
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1061 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 255 ctccccggcgacttcggcttcgaccccctggg 286
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1065 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 256 ctccccggcgacttcggcttcgaccccctggg 287
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1069 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 256 ctccccggcgacttcggcttcgaccccctggg 287
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1068 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 259 ctccccggcgacttcggcttcgaccccctggg 290
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 23304561 ctccccggcgacttcggcttcgaccccctggg 23304592
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 59819 ctccccggcgacttcggcttcgaccccctggg 59850
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 270 ctccccggcgacttcggcttcgaccccctggg 301
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 256 ctccccggcgacttcggcttcgaccccctggg 287
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 256 ctccccggcgacttcggcttcgaccccctggg 287
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 286 ctccccggcgacttcggcttcgaccccctggg 317
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 252 ctccccggcgacttcggcttcgaccccctggg 283
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 255 ctccccggcgacttcggcttcgaccccctggg 286
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 249 ctccccggcgacttcggcttcgaccccctggg 280
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 250 ctccccggcgacttcggcttcgaccccctggg 281
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 344 ctccccggcgacttcggcttcgaccccctggg 375
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 259 ctccccggcgacttcggcttcgaccccctggg 290
>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete cds Length = 1066 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 303 ctccccggtgacttcggcttcgaccccctggg 334 |||||||| ||||||||||||||||||||||| Sbjct: 226 ctccccggcgacttcggcttcgaccccctggg 257
>gb|AF139470.2|AF139470 Vigna radiata chlorophyll a/b-binding protein CP24 precursor (CipCp24) mRNA, complete cds; nuclear gene for chloroplast product Length = 1067 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 288 tggctcgatggctcgctccccggtgacttcggcttcgaccccctggggcttggcaaggac 347 ||||| ||||| ||||| || |||||||| || || ||||| ||||| || || |||||| Sbjct: 317 tggcttgatggatcgctaccaggtgactttggttttgacccactgggcctggggaaggac 376 Query: 348 ccggcgttcctcaagtggtacag 370 ||||| ||||| || |||||||| Sbjct: 377 ccggcattcctgaaatggtacag 399
>ref|NM_101449.3| Arabidopsis thaliana structural constituent of ribosome AT1G15810 mRNA, complete cds Length = 2301 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 345 gacccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatg 404 |||||||| || || || |||||||| ||||| || |||||||| || || ||||||||| Sbjct: 2258 gacccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatg 2199 Query: 405 gccgcggtgctgggcatcttcatcgg 430 || ||||| || || |||||| |||| Sbjct: 2198 gcagcggttcttgggatcttcgtcgg 2173
>gb|AC034256.3|F7H2 Sequence of BAC F7H2 from Arabidopsis thaliana chromosome 1, complete sequence Length = 77521 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 345 gacccggcgttcctcaagtggtacagggaggccgacctgatccacgggcgctgggcgatg 404 |||||||| || || || |||||||| ||||| || |||||||| || || ||||||||| Sbjct: 59764 gacccggcttttctgaaatggtacagagaggctgagctgatccatggccgatgggcgatg 59705 Query: 405 gccgcggtgctgggcatcttcatcgg 430 || ||||| || || |||||| |||| Sbjct: 59704 gcagcggttcttgggatcttcgtcgg 59679
>gb|AY104104.1| Zea mays PCO079073 mRNA sequence Length = 867 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 309 ggtgacttcggcttcgaccccctggg 334 |||||||||||||||||||||||||| Sbjct: 316 ggtgacttcggcttcgaccccctggg 341
>ref|NM_190195.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||||||||||| Sbjct: 47 cctccacctccgccaccgcctccgc 23
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||||||||||| Sbjct: 38563850 cctccacctccgccaccgcctccgc 38563874 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 91 tcgcctccacctccgccaccgcctccgc 118 |||||||||||||| ||||||||||||| Sbjct: 3463848 tcgcctccacctcctccaccgcctccgc 3463821 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 |||||| ||||||||||||||||||| Sbjct: 11568802 gcctccgcctccgccaccgcctccgc 11568777 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcggccg 123 |||| ||||| ||||||||||| ||||||||| Sbjct: 23976834 cgccgccaccgccgccaccgccgccgcggccg 23976865 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcc 113 |||||||||||||||||||| Sbjct: 13940197 cctccacctccgccaccgcc 13940178 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 88 cgctcgcctccacctccgccaccgcctc 115 ||||||||||| |||||||| ||||||| Sbjct: 11782096 cgctcgcctcctcctccgccgccgcctc 11782069 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 ctccacctccgccaccgcctccgc 118 ||||||||||||| |||||||||| Sbjct: 8140282 ctccacctccgcctccgcctccgc 8140259
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||||||||||| Sbjct: 156931 cctccacctccgccaccgcctccgc 156955
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||||||||||| Sbjct: 84531 cctccacctccgccaccgcctccgc 84555
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||||||||||| Sbjct: 21823 cctccacctccgccaccgcctccgc 21847
>dbj|AK071139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082D05, full insert sequence Length = 1296 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||||||||||| Sbjct: 271 cctccacctccgccaccgcctccgc 247
>gb|AF133118.1|AF133118 Oryza sativa nucleic acid binding protein (NBP) gene, complete cds Length = 5552 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||||||||||| Sbjct: 376 cctccacctccgccaccgcctccgc 352
>gb|AF047428.1|AF047428 Oryza sativa nucleic acid binding protein mRNA, complete cds Length = 1156 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||||||||||| Sbjct: 159 cctccacctccgccaccgcctccgc 135
>gb|AF045571.1|AF045571 Oryza sativa nucleic acid binding protein mRNA, complete cds Length = 1125 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||||||||||| Sbjct: 161 cctccacctccgccaccgcctccgc 137
>ref|XM_480796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 186 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 95 ctccacctccgccaccgcctccgc 118 |||||||||||||||||||||||| Sbjct: 127 ctccacctccgccaccgcctccgc 150
>gb|AF517868.1| Griffithsia japonica isolate Gj555 light-harvest protein mRNA, partial cds Length = 379 Score = 48.1 bits (24), Expect = 0.024 Identities = 42/48 (87%) Strand = Plus / Plus Query: 305 ccccggtgacttcggcttcgaccccctggggcttggcaaggacccggc 352 |||||| |||||| |||||||||| || || || |||||||||||||| Sbjct: 119 ccccggagacttctgcttcgacccgctcggcctcggcaaggacccggc 166
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 95 ctccacctccgccaccgcctccgc 118 |||||||||||||||||||||||| Sbjct: 7786762 ctccacctccgccaccgcctccgc 7786739 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||| ||||||||||||| Sbjct: 25796506 cctccacctccaccaccgcctccgc 25796530 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 cgccgcgtggtggtcgtcgccgcggccg 228 ||||||||||| ||||||||||| |||| Sbjct: 27376046 cgccgcgtggtcgtcgtcgccgccgccg 27376073
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0701D05 Length = 172161 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 91 tcgcctccacctccgccaccgcctccgc 118 |||||||||||||| ||||||||||||| Sbjct: 142218 tcgcctccacctcctccaccgcctccgc 142191
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 91 tcgcctccacctccgccaccgcctccgc 118 |||||||||||||| ||||||||||||| Sbjct: 31916 tcgcctccacctcctccaccgcctccgc 31889
>dbj|AB122117.1| Chlamydomonas reinhardtii LhcI-4 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1970 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 318 ggcttcgaccccctggggcttggcaaggaccc 349 ||||||||||||||||| || ||||||||||| Sbjct: 270 ggcttcgaccccctgggcctgggcaaggaccc 301
>dbj|AP005517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0090H20 Length = 132628 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 95 ctccacctccgccaccgcctccgc 118 |||||||||||||||||||||||| Sbjct: 18049 ctccacctccgccaccgcctccgc 18026
>dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1221_H04 Length = 129387 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 95 ctccacctccgccaccgcctccgc 118 |||||||||||||||||||||||| Sbjct: 127485 ctccacctccgccaccgcctccgc 127462
>emb|X71965.1|CSCAB2MR C.stellata cab2 mRNA for light harvesting complex I chlorophyll binding protein Length = 1141 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 307 ccggtgacttcggcttcgaccccctggg 334 ||||||||| |||||||||||||||||| Sbjct: 188 ccggtgactacggcttcgaccccctggg 215
>dbj|AK069523.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021D06, full insert sequence Length = 3768 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 91 tcgcctccacctccgccaccgcctccgc 118 |||||||||||||| ||||||||||||| Sbjct: 108 tcgcctccacctcctccaccgcctccgc 135
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028E10 Length = 140791 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 91 tcgcctccacctccgccaccgcctccgc 118 |||||||||||||| ||||||||||||| Sbjct: 50608 tcgcctccacctcctccaccgcctccgc 50581
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccgc 118 ||||||| ||||||||||||||||||| Sbjct: 180281 cgcctccgcctccgccaccgcctccgc 180255
>gb|AC124664.14| Mus musculus chromosome 1, clone RP23-103B18, complete sequence Length = 220456 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgc 118 |||||||||||||||| |||||||||| Sbjct: 212982 cgcctccacctccgcctccgcctccgc 213008 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 gcctccacctccgccaccgcctcc 116 ||||||||||||||| |||||||| Sbjct: 212965 gcctccacctccgcctccgcctcc 212988
>gb|AC132830.12| Mus musculus chromosome 1, clone RP24-566B6, complete sequence Length = 205300 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgc 118 |||||||||||||||| |||||||||| Sbjct: 68430 cgcctccacctccgcctccgcctccgc 68456 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 gcctccacctccgccaccgcctcc 116 ||||||||||||||| |||||||| Sbjct: 68413 gcctccacctccgcctccgcctcc 68436
>gb|AC156163.2| Mus musculus BAC clone RP24-122E11 from chromosome 9, complete sequence Length = 141660 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccgc 118 |||||||||||||||| |||||||||| Sbjct: 60648 cgcctccacctccgcctccgcctccgc 60622
>gb|AC134251.3| Mus musculus BAC clone RP23-430D14 from chromosome 3, complete sequence Length = 189471 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgc 118 |||||||||||||||| |||||||||| Sbjct: 176443 cgcctccacctccgcctccgcctccgc 176469
>gb|AC157816.4| Mus musculus chromosome 3, clone RP24-255I19, complete sequence Length = 204358 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgc 118 |||||||||||||||| |||||||||| Sbjct: 97688 cgcctccacctccgcctccgcctccgc 97714
>gb|AF517870.1| Griffithsia japonica isolate Gj411 light-harvest protein mRNA, partial cds Length = 479 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 306 cccggtgacttcggcttcgaccccctggggcttggcaaggacccggc 352 ||||| |||||| |||||||||| || || || |||||||||||||| Sbjct: 172 cccggcgacttctgcttcgacccgctcggcctcggcaaggacccggc 218
>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179892 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccgc 118 ||||||| ||||||||||||||||||| Sbjct: 52544 cgcctccgcctccgccaccgcctccgc 52518
>gb|AY094783.1| Drosophila melanogaster LD12750 full insert cDNA Length = 725 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccgc 118 ||||||| ||||||||||||||||||| Sbjct: 379 cgcctccgcctccgccaccgcctccgc 353
>ref|NM_132536.1| Drosophila melanogaster CG1840-RA (CG1840), mRNA Length = 716 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccgc 118 ||||||| ||||||||||||||||||| Sbjct: 397 cgcctccgcctccgccaccgcctccgc 371
>gb|AC102253.9| Mus musculus chromosome 3, clone RP24-175A24, complete sequence Length = 156901 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgc 118 |||||||||||||||| |||||||||| Sbjct: 108153 cgcctccacctccgcctccgcctccgc 108179
>dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-harvesting chlorophyll-a/b protein of photosystem I (Type III), complete cds Length = 2389 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 312 gacttcggcttcgaccccctggg 334 ||||||||||||||||||||||| Sbjct: 1056 gacttcggcttcgaccccctggg 1078
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 382 tgatccacgggcgctgggcgatg 404 ||||||||||||||||||||||| Sbjct: 473 tgatccacgggcgctgggcgatg 495
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 403 tggccgcggtgctgggcatcttcatcg 429 |||| |||||||||||||||||||||| Sbjct: 4543076 tggcggcggtgctgggcatcttcatcg 4543102
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccgc 118 ||||||| ||||||||||||||||||| Sbjct: 179985 cgcctccgcctccgccaccgcctccgc 179959
>emb|AJ937760.1| Uncultured candidate division WS3 bacterium fosmid clone b1bcf1.1.f04 Length = 37923 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 100 cctccgccaccgcctccgcggcc 122 ||||||||||||||||||||||| Sbjct: 27055 cctccgccaccgcctccgcggcc 27033
>emb|AL606750.13| Mouse DNA sequence from clone RP23-335A19 on chromosome 3, complete sequence Length = 207366 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgc 118 |||||||||||||||| |||||||||| Sbjct: 144512 cgcctccacctccgcctccgcctccgc 144538
>ref|NM_125089.3| Arabidopsis thaliana unknown protein AT5G57070 mRNA, complete cds Length = 2278 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccg 117 ||||||||||||| |||||||||||| Sbjct: 1462 cgcctccacctccaccaccgcctccg 1487
>ref|XM_464167.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 168 gcctccacctccgcctccgcctccgc 143
>ref|NM_183676.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 588 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 |||||| ||||||||||||||||||| Sbjct: 258 gcctccgcctccgccaccgcctccgc 233
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgcggccg 123 ||||| ||||||||||||||||||| |||| Sbjct: 79138 cctccgcctccgccaccgcctccgccgccg 79109
>gb|AY954734.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca2 gene, complete cds; nuclear gene for chloroplast product Length = 729 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 291 ctcgatggctcgctccccggtgacttcggcttcgaccc 328 ||||| ||||||||||| || ||||| ||||||||||| Sbjct: 154 ctcgacggctcgctcccgggcgactttggcttcgaccc 191
>gb|AC124981.25| Mus musculus chromosome 5, clone RP24-170P20, complete sequence Length = 153767 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 59163 gcctccacctccgcctccgcctccgc 59138
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0480H08, complete sequence Length = 156301 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgcggccg 123 ||||| |||||||| ||||||||||||||| Sbjct: 82261 cctcctcctccgcctccgcctccgcggccg 82232
>gb|AE009107.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 133 of 256 of the complete sequence Length = 12377 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 82 ccatggcgctcgcctccacctccgcc 107 |||||||||||||||||||| ||||| Sbjct: 12261 ccatggcgctcgcctccaccgccgcc 12236
>gb|AF240006.1| Sesamum indicum 7S globulin mRNA, complete cds Length = 2001 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 caccgcctccgcggccgtgctc 128 |||||||||||||||||||||| Sbjct: 227 caccgcctccgcggccgtgctc 206
>gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosome 10, complete sequence Length = 174497 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 135187 gcctccacctccgcctccgcctccgc 135162
>gb|AC113019.13| Mus musculus chromosome 7, clone RP23-185A21, complete sequence Length = 215975 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 17261 gcctccacctccgcctccgcctccgc 17286
>dbj|AP004253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_C07 Length = 108208 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 |||||| ||||||||||||||||||| Sbjct: 22598 gcctccgcctccgccaccgcctccgc 22573
>gb|DQ122899.1| Chlamydomonas incerta chloroplast light harvesting complex I protein (LhcA) mRNA, complete cds; nuclear gene for chloroplast product Length = 746 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 ccggtgacttcggcttcgaccccctg 332 ||||||||| |||||||||||||||| Sbjct: 149 ccggtgactacggcttcgaccccctg 174
>gb|DQ397598.1| Cenarchaeum symbiosum clone C06E05, complete sequence Length = 42858 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgcg 119 |||||||||||||||||||| ||||| Sbjct: 14388 cctccacctccgccaccgccgccgcg 14413
>gb|AF016274.1| Arabidopsis thaliana minisatellite-like locus CMs4 Length = 861 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccg 117 ||||||||||||| |||||||||||| Sbjct: 716 cgcctccacctccaccaccgcctccg 691
>gb|AE011662.1| Xanthomonas axonopodis pv. citri str. 306, section 40 of 469 of the complete genome Length = 11001 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 152 gcgtgcgctcgccaatgccgcc 173 |||||||||||||||||||||| Sbjct: 1994 gcgtgcgctcgccaatgccgcc 1973
>ref|NM_164744.1| Drosophila melanogaster Na+-driven anion exchanger 1 CG4675-RB, transcript variant B (Ndae1), mRNA Length = 3688 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcc 113 |||||||||||||||||||||| Sbjct: 546 cgcctccacctccgccaccgcc 525
>ref|NM_143004.1| Drosophila melanogaster CG13615-RA (CG13615), mRNA Length = 873 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcc 113 |||||||||||||||||||||| Sbjct: 218 cgcctccacctccgccaccgcc 239
>ref|NM_141856.2| Drosophila melanogaster CG6930-RA (CG6930), mRNA Length = 1520 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccg 117 |||||||||| ||||||||||||||| Sbjct: 1255 cgcctccaccgccgccaccgcctccg 1230
>gb|AC008116.8| Homo sapiens 3p25-26 BAC CTB-187P1 (California Institute of Technology BAC Library) complete sequence Length = 104947 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 29134 gcctccacctccgcctccgcctccgc 29159
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 82 ccatggcgctcgcctccacctccgcc 107 |||||||||||||||||||| ||||| Sbjct: 1476634 ccatggcgctcgcctccaccgccgcc 1476609
>gb|AY070621.1| Drosophila melanogaster RE72719 full length cDNA Length = 1537 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccg 117 |||||||||| ||||||||||||||| Sbjct: 1254 cgcctccaccgccgccaccgcctccg 1229
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 91 tcgcctccacctccgccaccgcctccgcgg 120 |||||||| |||||||| |||||||||||| Sbjct: 4101610 tcgcctccgcctccgcctccgcctccgcgg 4101581
>gb|AF268322.1|AF268322 Guillardia theta light-harvesting complex protein LHCC4 mRNA, partial cds Length = 715 Score = 44.1 bits (22), Expect = 0.38 Identities = 37/42 (88%) Strand = Plus / Plus Query: 304 tccccggtgacttcggcttcgaccccctggggcttggcaagg 345 ||||||| ||||||||||| |||||||| || || ||||||| Sbjct: 507 tccccggagacttcggctttgaccccctcggcctcggcaagg 548
>dbj|AK033640.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130206G01 product:unclassifiable, full insert sequence Length = 1526 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 80 gcctccacctccgcctccgcctccgc 105
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgcggccg 123 ||||| |||||||| ||||||||||||||| Sbjct: 21324789 cctcctcctccgcctccgcctccgcggccg 21324760 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 ctccacctccgccaccgcctccgcggccg 123 |||| ||||||||||||||||||| |||| Sbjct: 22774358 ctcctcctccgccaccgcctccgccgccg 22774386 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcg 119 ||||||| |||||||| ||||||||||| Sbjct: 1553481 cgcctccgcctccgcctccgcctccgcg 1553508
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgcggccg 123 ||||| ||||||||||||||||||| |||| Sbjct: 18681362 cctccgcctccgccaccgcctccgccgccg 18681333 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 20448804 cgcctccgcctccgccaccgcctcc 20448828 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggcgctcgcctccacctccgc 106 ||||||||||||||||||||| Sbjct: 14917022 ggcgctcgcctccacctccgc 14917042 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgcggcc 122 ||||| |||||||| |||||||||||||| Sbjct: 13577859 cctcctcctccgcctccgcctccgcggcc 13577831
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 90 ctcgcctccacctccgccaccgcctccgcg 119 |||||| || |||||||||||||||||||| Sbjct: 20715762 ctcgccgcctcctccgccaccgcctccgcg 20715791 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||||||||| |||||||||| Sbjct: 7150595 cctccacctccgcctccgcctccgc 7150619 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcggccg 123 ||||||| |||||||||||||| |||| |||| Sbjct: 29598486 cgcctcctcctccgccaccgccgccgccgccg 29598517 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 ctccgccaccgcctccgcggccgt 124 |||||||||||||||||| ||||| Sbjct: 25405804 ctccgccaccgcctccgccgccgt 25405827 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgcggc 121 |||||||| || |||||||||||||||| Sbjct: 23650521 cctccaccacctccaccgcctccgcggc 23650494 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 ctccacctccgccaccgcctccgc 118 ||||||| |||||||||||||||| Sbjct: 23426927 ctccaccaccgccaccgcctccgc 23426904 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 cctccgccaccgcctccgcggccg 123 ||||||||||||||||||| |||| Sbjct: 10908109 cctccgccaccgcctccgccgccg 10908086 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 90 ctcgcctccacctccgccaccgcctccgcggc 121 |||||| || || ||||||||||||||||||| Sbjct: 8992115 ctcgccgcctccgccgccaccgcctccgcggc 8992084 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcg 119 ||||||| |||||||| ||||||||||| Sbjct: 6261578 cgcctccgcctccgcctccgcctccgcg 6261605
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 91 tcgcctccacctccgccaccgcctccgcgg 120 |||||||| |||||||||||||| |||||| Sbjct: 11868400 tcgcctccgcctccgccaccgccgccgcgg 11868429 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 2664606 gcctccacctccgcctccgcctccgc 2664581 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 12085181 cgcctcctcctccgccaccgcctcc 12085205 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 7578073 cgcctccgcctccgccaccgcctcc 7578049 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cctccgccaccgcctccgcg 119 |||||||||||||||||||| Sbjct: 7309844 cctccgccaccgcctccgcg 7309825 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 88 cgctcgcctccacctccgccaccgcctc 115 ||||||||||| |||||||| ||||||| Sbjct: 595538 cgctcgcctcctcctccgccgccgcctc 595511
>gb|DQ019314.1| Chlamydomonas reinhardtii soluble starch synthase III mRNA, complete cds Length = 3729 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgcg 119 |||||||||||||||||||| ||||| Sbjct: 913 cctccacctccgccaccgccgccgcg 888
>gb|AC012675.5|AC012675 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR10E07, complete sequence Length = 176818 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcc 113 |||||||||||||||||||||| Sbjct: 155669 cgcctccacctccgccaccgcc 155690
>emb|BX830204.1|CNS0A1NN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1955 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccg 117 ||||||||||||| |||||||||||| Sbjct: 1459 cgcctccacctccaccaccgcctccg 1484
>gb|AC008366.3|AC008366 Drosophila melanogaster, chromosome 3R, region 96A-96A, BAC clone BACR13M04, complete sequence Length = 172282 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcc 113 |||||||||||||||||||||| Sbjct: 14232 cgcctccacctccgccaccgcc 14253
>emb|BX832578.1|CNS09ZO4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZE11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2041 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccg 117 ||||||||||||| |||||||||||| Sbjct: 1281 cgcctccacctccaccaccgcctccg 1306
>gb|AC008204.9|AC008204 Drosophila melanogaster, chromosome 3R, region 95E-95F, BAC clone BACR04E17, complete sequence Length = 199016 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcc 113 |||||||||||||||||||||| Sbjct: 140462 cgcctccacctccgccaccgcc 140483
>gb|AC007805.5|AC007805 Drosophila melanogaster, chromosome 3R, region 86F-86F, BAC clone BACR11G22, complete sequence Length = 170324 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccg 117 |||||||||| ||||||||||||||| Sbjct: 142302 cgcctccaccgccgccaccgcctccg 142327
>gb|AY826899.1| Heterocapsa triquetra clone HTLHC15002 chloroplast light harvesting complex protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1161 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 305 ccccggtgacttcggcttcgaccccctggg 334 |||||| ||| ||||||||||||||||||| Sbjct: 650 ccccggcgacctcggcttcgaccccctggg 679
>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0008D05 Length = 134776 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 |||||| ||||||||||||||||||| Sbjct: 75809 gcctccgcctccgccaccgcctccgc 75784
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 90 ctcgcctccacctccgccaccgcctccgcg 119 |||||| || |||||||||||||||||||| Sbjct: 138169 ctcgccgcctcctccgccaccgcctccgcg 138198
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 |||||| ||||||||||||||||||| Sbjct: 7926 gcctccgcctccgccaccgcctccgc 7901
>dbj|AP005009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572A04 Length = 132018 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 91 tcgcctccacctccgccaccgcctccgcgg 120 |||||||| |||||||||||||| |||||| Sbjct: 66173 tcgcctccgcctccgccaccgccgccgcgg 66202
>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0479D12 Length = 148362 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 66828 gcctccacctccgcctccgcctccgc 66803
>dbj|AB023042.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUL3 Length = 82010 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccg 117 ||||||||||||| |||||||||||| Sbjct: 3683 cgcctccacctccaccaccgcctccg 3708
>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24 Length = 87487 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccg 117 ||||||||||||||||||| |||||| Sbjct: 84394 cgcctccacctccgccaccacctccg 84369
>dbj|AK102492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094P20, full insert sequence Length = 875 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 |||||| ||||||||||||||||||| Sbjct: 318 gcctccgcctccgccaccgcctccgc 293
>dbj|AK072257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H18, full insert sequence Length = 1804 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgcggccg 123 ||||| |||||||| ||||||||||||||| Sbjct: 94 cctcctcctccgcctccgcctccgcggccg 123
>dbj|AK068931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E02, full insert sequence Length = 1389 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 168 gcctccacctccgcctccgcctccgc 143
>gb|AE003747.3| Drosophila melanogaster chromosome 3R, section 85 of 118 of the complete sequence Length = 206741 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcc 113 |||||||||||||||||||||| Sbjct: 140718 cgcctccacctccgccaccgcc 140739
>gb|AE003693.3| Drosophila melanogaster chromosome 3R, section 31 of 118 of the complete sequence Length = 226782 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccg 117 |||||||||| ||||||||||||||| Sbjct: 17795 cgcctccaccgccgccaccgcctccg 17820
>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete sequence Length = 267997 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcc 113 |||||||||||||||||||||| Sbjct: 208894 cgcctccacctccgccaccgcc 208915
>gb|AF094776.1|AF094776 Oryza sativa chlorophyll a/b-binding protein precursor (Cab26) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1050 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 306 cccggtgacttcggcttcgaccccctggggcttg 339 |||||||||||||| |||||||| ||||| |||| Sbjct: 248 cccggtgacttcgggttcgacccgctgggccttg 281
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgcggccg 123 ||||| |||||||| ||||||||||||||| Sbjct: 21634988 cctcctcctccgcctccgcctccgcggccg 21634959 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 ctccacctccgccaccgcctccgcggccg 123 |||| ||||||||||||||||||| |||| Sbjct: 23084268 ctcctcctccgccaccgcctccgccgccg 23084296 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcg 119 ||||||| |||||||| ||||||||||| Sbjct: 1551202 cgcctccgcctccgcctccgcctccgcg 1551229
>gb|AC163645.5| Mus musculus BAC clone RP23-206F16 from chromosome 10, complete sequence Length = 212773 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 30856 gcctccacctccgcctccgcctccgc 30831
>gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome 5, complete sequence Length = 236596 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 198290 gcctccacctccgcctccgcctccgc 198265
>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence Length = 53591 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgcg 119 |||||||||||||||||||| ||||| Sbjct: 36003 cctccacctccgccaccgccgccgcg 36028
>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314, complete sequence Length = 126349 Score = 44.1 bits (22), Expect = 0.38 Identities = 52/62 (83%) Strand = Plus / Plus Query: 309 ggtgacttcggcttcgaccccctggggcttggcaaggacccggcgttcctcaagtggtac 368 |||||||| || || ||||| || || || || |||||||| ||||||||||| |||||| Sbjct: 96970 ggtgactttggttttgacccactaggcctaggaaaggacccagcgttcctcaaatggtac 97029 Query: 369 ag 370 || Sbjct: 97030 ag 97031
>gb|AC022384.5| Homo sapiens chromosome 3 clone RP11-438J1 map 3p, complete sequence Length = 210053 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 gcctccacctccgccaccgcctccgc 118 ||||||||||||||| |||||||||| Sbjct: 150993 gcctccacctccgcctccgcctccgc 151018
>ref|NM_125329.3| Arabidopsis thaliana MBD6; DNA binding AT5G59380 (MBD6) mRNA, complete cds Length = 960 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gcctccacctccgccaccgcc 113 ||||||||||||||||||||| Sbjct: 540 gcctccacctccgccaccgcc 560
>ref|XM_511962.1| PREDICTED: Pan troglodytes LOC455219 (LOC455219), mRNA Length = 2259 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||||||||||||||| |||| Sbjct: 174 cctccacctccgccaccgccaccgc 150
>gb|AC155166.4| Mus musculus BAC clone RP24-69M8 from chromosome 8, complete sequence Length = 212711 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 ccacctccgccaccgcctccg 117 ||||||||||||||||||||| Sbjct: 91849 ccacctccgccaccgcctccg 91829
>ref|XM_483357.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1922 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||| ||||||||||||| Sbjct: 298 cctccacctccaccaccgcctccgc 274
>ref|XM_465173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1130 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 46 cgcctcctcctccgccaccgcctcc 70
>ref|XM_506784.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.9 mRNA Length = 1318 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 71 cgcctcctcctccgccaccgcctcc 95
>ref|XM_450899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1599 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgcggcc 122 ||||| |||||||| |||||||||||||| Sbjct: 1109 cctcctcctccgcctccgcctccgcggcc 1137
>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11, complete sequence Length = 133352 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 199 cacgccgcgtggtggtcgtcgccgcggccgccg 231 ||||||||||||| |||| |||||| ||||||| Sbjct: 75482 cacgccgcgtggtcgtcgccgccgccgccgccg 75514
>gb|AY355372.1| Rickettsia bellii surface antigen (sca2) gene, partial cds Length = 2046 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||| ||||||| Sbjct: 166 cctccacctccgccaccacctccgc 190
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgc 112 ||||||||||||||||||||| Sbjct: 131416 cgcctccacctccgccaccgc 131436
>gb|BC051959.1| Mus musculus Iroquois related homeobox 5 (Drosophila), mRNA (cDNA clone MGC:62229 IMAGE:6404946), complete cds Length = 2225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccacctccgccaccgcctccg 117 ||||||||||||||||||||| Sbjct: 1142 ccacctccgccaccgcctccg 1162
>ref|XM_959268.1| Neurospora crassa OR74A hypothetical protein (NCU00818.1) partial mRNA Length = 1755 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||||||||| |||||||||| Sbjct: 86 cctccacctccgcctccgcctccgc 110
>ref|XM_324997.1| Neurospora crassa OR74A hypothetical protein (NCU00818.1) partial mRNA Length = 1755 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||||||||| |||||||||| Sbjct: 86 cctccacctccgcctccgcctccgc 110
>ref|NM_175407.2| Mus musculus RIKEN cDNA 5330439J01 gene (5330439J01Rik), mRNA Length = 2648 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||||||||||||||| |||| Sbjct: 50 cctccacctccgccaccgccaccgc 74
>gb|AC140482.2| Mus musculus BAC clone RP24-133E1 from chromosome 10, complete sequence Length = 154925 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||||||||||||||| |||| Sbjct: 170 cctccacctccgccaccgccaccgc 146
>gb|AY970506.1| Rickettsia bellii cell surface antigen Sca2-6 (sca2-6) gene, partial cds Length = 2727 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||| ||||||| Sbjct: 166 cctccacctccgccaccacctccgc 190
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 81 cccatggcgctcgcctccacctccgccac 109 ||||||||||||| ||||||| ||||||| Sbjct: 34310477 cccatggcgctcgtctccaccaccgccac 34310449 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgc 112 ||||||||||||||||||||| Sbjct: 24504444 cgcctccacctccgccaccgc 24504424 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcgg 120 ||||||| |||||||| |||||||||||| Sbjct: 79234 cgcctcctcctccgcctccgcctccgcgg 79262 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctc 115 ||||||| |||||||||||||||| Sbjct: 34895404 cgcctccgcctccgccaccgcctc 34895427
>gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0088K21, complete sequence Length = 153239 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 ctccacctccgccaccgcctccgcggccg 123 |||| ||||||||||||||||||| |||| Sbjct: 34075 ctcctcctccgccaccgcctccgccgccg 34103
>ref|XM_990367.1| PREDICTED: Mus musculus RIKEN cDNA 5330439J01 gene (5330439J01Rik), mRNA Length = 2240 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||||||||||||||| |||| Sbjct: 44 cctccacctccgccaccgccaccgc 68
>gb|BC057055.1| Mus musculus RIKEN cDNA 5330439J01 gene, mRNA (cDNA clone MGC:67344 IMAGE:5717322), complete cds Length = 2648 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||||||||||||||| |||| Sbjct: 50 cctccacctccgccaccgccaccgc 74
>gb|BC059851.1| Mus musculus RIKEN cDNA 5330439J01 gene, mRNA (cDNA clone IMAGE:5704623), partial cds Length = 4850 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||||||||||||||| |||| Sbjct: 371 cctccacctccgccaccgccaccgc 395
>ref|XM_849095.1| PREDICTED: Canis familiaris hypothetical protein LOC611426 (LOC611426), mRNA Length = 2514 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||| |||||||||||||||| Sbjct: 493 cctccaccgccgccaccgcctccgc 517
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||||||||| ||||||| Sbjct: 1382662 cctccacctccgccaccacctccgc 1382638
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 tcgccgcggccgccgacaaga 237 ||||||||||||||||||||| Sbjct: 40901 tcgccgcggccgccgacaaga 40921
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 tcgccgcggccgccgacaaga 237 ||||||||||||||||||||| Sbjct: 343109 tcgccgcggccgccgacaaga 343129
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 tcgccgcggccgccgacaaga 237 ||||||||||||||||||||| Sbjct: 178903 tcgccgcggccgccgacaaga 178883
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 gtcgtcgccgcggccgccgac 233 ||||||||||||||||||||| Sbjct: 160640 gtcgtcgccgcggccgccgac 160620
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||||||||| ||||||||||| Sbjct: 88643 cgcctccacctcctccaccgcctcc 88667
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 tcgcctccacctccgccaccgcctc 115 ||||||||||||||||| ||||||| Sbjct: 28202 tcgcctccacctccgcctccgcctc 28178
>emb|AJ271054.1|MMU271054 Mus musculus partial mRNA for iroquois homeobox protein 5 (Irx5 gene) Length = 1349 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccacctccgccaccgcctccg 117 ||||||||||||||||||||| Sbjct: 739 ccacctccgccaccgcctccg 759
>gb|DQ109812.1| Rattus norvegicus iroquois homeobox protein 5 mRNA, complete cds Length = 1455 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccacctccgccaccgcctccg 117 ||||||||||||||||||||| Sbjct: 961 ccacctccgccaccgcctccg 981
>gb|BC056994.1| Mus musculus Iroquois related homeobox 5 (Drosophila), mRNA (cDNA clone MGC:66960 IMAGE:5716910), complete cds Length = 2421 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccacctccgccaccgcctccg 117 ||||||||||||||||||||| Sbjct: 1349 ccacctccgccaccgcctccg 1369
>dbj|AK061868.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H11, full insert sequence Length = 1130 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 46 cgcctcctcctccgccaccgcctcc 70
>gb|AC010049.7| Drosophila melanogaster 3L BAC RPCI98-3O18 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 168058 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||| ||||||||||||||||||| Sbjct: 105807 cctccgcctccgccaccgcctccgc 105831
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcgg 120 ||||||| |||||||| |||||||||||| Sbjct: 13234 cgcctcctcctccgcctccgcctccgcgg 13262
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 |||||||||||||||| |||||||| Sbjct: 11739 cgcctccacctccgcccccgcctcc 11763
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 |||||||||||||||| |||||||| Sbjct: 159253 cgcctccacctccgcccccgcctcc 159277
>tpg|BK002261.1| TPA: TPA_inf: Drosophila melanogaster HDC11349 (HDC11349) gene, complete cds Length = 969 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||| ||||||||||||||||||| Sbjct: 561 cctccgcctccgccaccgcctccgc 585
>gb|AE012198.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 106 of 460 of the complete genome Length = 12541 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 gcgatggccgcggtgctgggc 419 ||||||||||||||||||||| Sbjct: 5340 gcgatggccgcggtgctgggc 5360
>gb|AC099553.1| Drosophila melanogaster 3L BAC RP98-25G5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177608 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||| ||||||||||||||||||| Sbjct: 174713 cctccgcctccgccaccgcctccgc 174737
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctccgcgg 120 ||||||| |||||||| |||||||||||| Sbjct: 45984 cgcctcctcctccgcctccgcctccgcgg 45956
>ref|NM_001030044.1| Rattus norvegicus iroquois homeobox protein 5 (LOC498918), mRNA Length = 1455 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccacctccgccaccgcctccg 117 ||||||||||||||||||||| Sbjct: 961 ccacctccgccaccgcctccg 981
>gb|AF230074.1|AF230074 Mus musculus iroquois homeobox protein 5 IRX-5 (Irx5) mRNA, complete cds Length = 2223 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccacctccgccaccgcctccg 117 ||||||||||||||||||||| Sbjct: 1516 ccacctccgccaccgcctccg 1536
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 gcgatggccgcggtgctgggc 419 ||||||||||||||||||||| Sbjct: 3873617 gcgatggccgcggtgctgggc 3873597 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 ctcgcctccacctccgccaccgcc 113 |||||| ||||||||||||||||| Sbjct: 3527215 ctcgccaccacctccgccaccgcc 3527192
>ref|NM_068297.2| Caenorhabditis elegans Sperm-Specific family, class Q family member (ssq-2) (ssq-2) mRNA, complete cds Length = 1291 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 tccacctccgccaccgcctcc 116 ||||||||||||||||||||| Sbjct: 1166 tccacctccgccaccgcctcc 1146
>dbj|AK004747.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200013N09 product:iroquois related homeobox 5 (Drosophila), full insert sequence Length = 1843 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccacctccgccaccgcctccg 117 ||||||||||||||||||||| Sbjct: 1162 ccacctccgccaccgcctccg 1182
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgcggc 121 |||||| |||||||| ||||||||||||| Sbjct: 26160003 gcctccgcctccgcctccgcctccgcggc 26159975 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||||||||||||| ||||||| Sbjct: 10066174 cgcctccacctccgccagcgcctcc 10066198 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcggccg 123 ||||||| |||||||||||||| |||| |||| Sbjct: 26711838 cgcctccgcctccgccaccgccaccgccgccg 26711869
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 199 cacgccgcgtggtggtcgtcgccgcggccgccg 231 ||||||||||||| |||| |||||| ||||||| Sbjct: 26050721 cacgccgcgtggtcgtcgccgccgccgccgccg 26050753 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 gcgatggccgcggtgctgggcatc 422 |||||||||||| ||||||||||| Sbjct: 19614588 gcgatggccgcgctgctgggcatc 19614565
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 81 cccatggcgctcgcctccacctccgccac 109 ||||||||||||| ||||||| ||||||| Sbjct: 34400949 cccatggcgctcgtctccaccaccgccac 34400921 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgc 112 ||||||||||||||||||||| Sbjct: 24421913 cgcctccacctccgccaccgc 24421893 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcgg 120 ||||||| |||||||| |||||||||||| Sbjct: 79234 cgcctcctcctccgcctccgcctccgcgg 79262 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctc 115 ||||||| |||||||||||||||| Sbjct: 34985476 cgcctccgcctccgccaccgcctc 34985499 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 ctccacctccgccaccgcctccgc 118 ||||||||||||| |||||||||| Sbjct: 9598225 ctccacctccgcctccgcctccgc 9598248
>emb|BX833717.1|CNS09Z7H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL72ZH04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 880 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gcctccacctccgccaccgcc 113 ||||||||||||||||||||| Sbjct: 496 gcctccacctccgccaccgcc 516
>gb|AY826898.1| Heterocapsa triquetra clone HTLCH15001 chloroplast light harvesting complex protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1165 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 305 ccccggtgacttcggcttcgaccccctggggcttggcaagg 345 |||||| ||| | ||||||||||||||||| || ||||||| Sbjct: 657 ccccggcgaccttggcttcgaccccctgggcctgggcaagg 697
>gb|BT004606.1| Arabidopsis thaliana At5g59380 gene, complete cds Length = 678 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gcctccacctccgccaccgcc 113 ||||||||||||||||||||| Sbjct: 480 gcctccacctccgccaccgcc 500
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 81 cccatggcgctcgcctccacctccgccac 109 ||||||||||||| ||||||| ||||||| Sbjct: 24521 cccatggcgctcgtctccaccaccgccac 24549
>gb|AF165985.1|AF165985 Mus musculus iroquois-class homeobox protein Irx5 (Irx5) mRNA, partial cds Length = 1325 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccacctccgccaccgcctccg 117 ||||||||||||||||||||| Sbjct: 961 ccacctccgccaccgcctccg 981
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 gtcgtcgccgcggccgccgac 233 ||||||||||||||||||||| Sbjct: 4602730 gtcgtcgccgcggccgccgac 4602750 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 tgccgcctccctcggcgccg 186 |||||||||||||||||||| Sbjct: 1664270 tgccgcctccctcggcgccg 1664251 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 cacctccgccaccgcctccgcggc 121 |||||||||||||||| ||||||| Sbjct: 1008268 cacctccgccaccgccgccgcggc 1008245
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||||||||| |||||||||| Sbjct: 28006 cctccacctccgcctccgcctccgc 28030
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||| ||||||||||||| Sbjct: 68717 cctccacctccaccaccgcctccgc 68741
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 171779 cgcctccgcctccgccaccgcctcc 171755
>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1531_B07 Length = 115245 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 76943 cgcctccgcctccgccaccgcctcc 76967
>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0014G10 Length = 164147 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggcgctcgcctccacctccgc 106 ||||||||||||||||||||| Sbjct: 125361 ggcgctcgcctccacctccgc 125381
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgcggcc 122 ||||| |||||||| |||||||||||||| Sbjct: 15275 cctcctcctccgcctccgcctccgcggcc 15247
>dbj|AP007149.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa018M17 Length = 36758 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgcggcc 122 ||||| |||||||| |||||||||||||| Sbjct: 25845 cctcctcctccgcctccgcctccgcggcc 25817
>dbj|BS000207.2| Pan troglodytes chromosome 22 clone:PTB-155J22, map 22, complete sequences Length = 193476 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 |||||||||||||||| |||||||| Sbjct: 4083 cgcctccacctccgcctccgcctcc 4107
>dbj|BS000206.1| Pan troglodytes chromosome 22 clone:RP43-160M11, map 22, complete sequences Length = 181571 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 |||||||||||||||| |||||||| Sbjct: 154854 cgcctccacctccgcctccgcctcc 154878
>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026D20 Length = 130634 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 33486 cgcctcctcctccgccaccgcctcc 33510
>dbj|AB122114.1| Chlamydomonas reinhardtii LhcI-1 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 2649 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 gacttcggcttcgaccccctg 332 ||||||||||||||||||||| Sbjct: 1002 gacttcggcttcgaccccctg 1022
>dbj|AB025604.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15 Length = 75125 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gcctccacctccgccaccgcc 113 ||||||||||||||||||||| Sbjct: 16756 gcctccacctccgccaccgcc 16776
>dbj|AK121655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061N09, full insert sequence Length = 1339 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 74 cgcctccgcctccgccaccgcctcc 98
>emb|Y07752.1|VCPHEROPH V.carteri mRNA for pherophorin-S Length = 1800 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 758 cgcctccgcctccgccaccgcctcc 782
>emb|X95326.1|CRRNA818 C.reinhardtii mRNA for LI818r-3 protein Length = 1542 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 306 cccggtgacttcggcttcgaccccctggg 334 ||||||||| | ||||||||||||||||| Sbjct: 543 cccggtgacctgggcttcgaccccctggg 571
>emb|X95307.1|CRDNA818 C.reinhardtii LI818r-1 gene Length = 1019 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 306 cccggtgacttcggcttcgaccccctggg 334 ||||||||| | ||||||||||||||||| Sbjct: 588 cccggtgacctgggcttcgaccccctggg 616
>dbj|AK109201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C03, full insert sequence Length = 898 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||| ||||||||||||| Sbjct: 312 cctccacctccaccaccgcctccgc 336
>dbj|AK106831.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F09, full insert sequence Length = 2329 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 ctccacctccgccaccgcctccgcggccg 123 |||| ||||||||||||||||||| |||| Sbjct: 213 ctcctcctccgccaccgcctccgccgccg 241
>dbj|AK105580.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E04, full insert sequence Length = 1605 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgcggcc 122 ||||| |||||||| |||||||||||||| Sbjct: 838 cctcctcctccgcctccgcctccgcggcc 866
>dbj|AK103335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125P20, full insert sequence Length = 1397 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcgg 120 ||||||| |||||||| |||||||||||| Sbjct: 144 cgcctcctcctccgcctccgcctccgcgg 172
>dbj|AK102383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092C12, full insert sequence Length = 4323 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgc 118 |||||||||||||| |||||||||| Sbjct: 227 cctccacctccgcctccgcctccgc 203
>dbj|AK100567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104M20, full insert sequence Length = 2127 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 95 ctccacctccgccaccgcctccgcggccg 123 |||| ||||||||||||||||||| |||| Sbjct: 201 ctcctcctccgccaccgcctccgccgccg 229
>dbj|AK098864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A03, full insert sequence Length = 1046 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 306 cccggtgacttcggcttcgaccccctggg 334 |||||||||||||| |||||||| ||||| Sbjct: 263 cccggtgacttcgggttcgacccgctggg 291
>dbj|AK073946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071N19, full insert sequence Length = 2778 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 gcctccacctccgccaccgcctccgcggc 121 |||||| |||||||| ||||||||||||| Sbjct: 396 gcctccgcctccgcctccgcctccgcggc 424
>dbj|AK070323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052N10, full insert sequence Length = 1922 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cctccacctccgccaccgcctccgc 118 ||||||||||| ||||||||||||| Sbjct: 297 cctccacctccaccaccgcctccgc 273
>dbj|AK065304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002O01, full insert sequence Length = 1318 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||| ||||||||||||||||| Sbjct: 71 cgcctcctcctccgccaccgcctcc 95
>dbj|AK063513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-G04, full insert sequence Length = 2576 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ggcgctcgcctccacctccgc 106 ||||||||||||||||||||| Sbjct: 326 ggcgctcgcctccacctccgc 346
>dbj|AK063305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F09, full insert sequence Length = 2022 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 tcgcctccacctccgccaccgcctc 115 ||||||||||||||||| ||||||| Sbjct: 239 tcgcctccacctccgcctccgcctc 215
>dbj|AK061783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E05, full insert sequence Length = 1242 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcgg 120 ||||||| |||||||| |||||||||||| Sbjct: 104 cgcctcctcctccgcctccgcctccgcgg 132
>dbj|AK060904.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E07, full insert sequence Length = 1051 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 306 cccggtgacttcggcttcgaccccctggg 334 |||||||||||||| |||||||| ||||| Sbjct: 268 cccggtgacttcgggttcgacccgctggg 296
>dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F04, full insert sequence Length = 1958 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 306 cccggtgacttcggcttcgaccccctggg 334 |||||||||||||| |||||||| ||||| Sbjct: 265 cccggtgacttcgggttcgacccgctggg 293
>gb|AE003594.3| Drosophila melanogaster chromosome 3L, section 75 of 83 of the complete sequence Length = 314904 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 cctccacctccgccaccgcctccgc 118 ||||| ||||||||||||||||||| Sbjct: 202409 cctccgcctccgccaccgcctccgc 202433
>ref|NM_018826.2| Mus musculus Iroquois related homeobox 5 (Drosophila) (Irx5), mRNA Length = 2421 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 ccacctccgccaccgcctccg 117 ||||||||||||||||||||| Sbjct: 1349 ccacctccgccaccgcctccg 1369
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 93 gcctccacctccgccaccgcctccgcggc 121 |||||| |||||||| ||||||||||||| Sbjct: 26088179 gcctccgcctccgcctccgcctccgcggc 26088151 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctcc 116 ||||||||||||||||| ||||||| Sbjct: 10066059 cgcctccacctccgccagcgcctcc 10066083 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 92 cgcctccacctccgccaccgcctccgcggccg 123 ||||||| |||||||||||||| |||| |||| Sbjct: 26640008 cgcctccgcctccgccaccgccaccgccgccg 26640039 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,612,933 Number of Sequences: 3902068 Number of extensions: 2612933 Number of successful extensions: 69028 Number of sequences better than 10.0: 364 Number of HSP's better than 10.0 without gapping: 389 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63984 Number of HSP's gapped (non-prelim): 5020 length of query: 438 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 416 effective length of database: 17,147,199,772 effective search space: 7133235105152 effective search space used: 7133235105152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
