ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast38b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYNS_ECOLI (P00816) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (... 28 4.9
2CYNS_ECO57 (P58704) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (... 28 4.9
3CYNS_PSEAE (Q9I263) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (... 28 6.4
4BCL3_HUMAN (P20749) B-cell lymphoma 3-encoded protein (Protein B... 28 8.4

>CYNS_ECOLI (P00816) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)|
           (Cyanate hydrolase)
          Length = 156

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
 Frame = +2

Query: 47  VVARLMGLDALPYGAAD--------EDDGQQVARGGELRRSASERVPRDPARFRFVD 193
           V A L+G  ALP  AA         ++D   + +   LR    +R+P DP  +RF +
Sbjct: 43  VTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYE 99



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>CYNS_ECO57 (P58704) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)|
           (Cyanate hydrolase)
          Length = 156

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
 Frame = +2

Query: 47  VVARLMGLDALPYGAADE--------DDGQQVARGGELRRSASERVPRDPARFRFVD 193
           V A L+G  ALP  AA +        +D   + +   LR    +R+P DP  +RF +
Sbjct: 43  VTAALLGQQALPADAARQVGAKLDLDEDAILLLQMIPLRGCIDDRIPTDPTMYRFYE 99



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>CYNS_PSEAE (Q9I263) Cyanate hydratase (EC 4.2.1.104) (Cyanase) (Cyanate lyase)|
           (Cyanate hydrolase)
          Length = 156

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
 Frame = +2

Query: 47  VVARLMGLDALPYGAAD--------EDDGQQVARGGELRRSASERVPRDPARFRFVD 193
           V A L+G  ALP  AA         +DD   + +   LR S    +P DP  +RF +
Sbjct: 43  VTAALLGQHALPEAAARKVAAQLGLDDDAVLLLQSIPLRGSIPGGIPSDPTIYRFYE 99



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>BCL3_HUMAN (P20749) B-cell lymphoma 3-encoded protein (Protein Bcl-3)|
          Length = 446

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 143 SASERVPRDPARFRFVDPSFF-EKPAPP 223
           S S+  PRDP  F    P+FF   P+PP
Sbjct: 394 SPSQSPPRDPPGFPMAPPNFFLPSPSPP 421


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,451,840
Number of Sequences: 219361
Number of extensions: 243695
Number of successful extensions: 938
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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