ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast38a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191264.1| Oryza sativa (japonica cultivar-group), predic... 70 1e-09
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-09
3dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-09
4dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-09
5dbj|AK072330.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 1e-09
6gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome... 62 3e-07
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-07
8ref|NM_191956.1| Oryza sativa (japonica cultivar-group), predic... 50 0.001
9gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.001
10dbj|AP003706.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.001
11dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.001
12dbj|AB071291.1| Oryza sativa OsETTIN2 mRNA for Arabidopsis ETTIN... 50 0.001
13dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN... 50 0.001
14ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predic... 46 0.017
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.017
16dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.017
17dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.017
18dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.017
19dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.017
20dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.017
21dbj|AB071296.1| Oryza sativa OsARF7a mRNA for auxin response fac... 46 0.017
22dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response fact... 46 0.017
23gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.065
24gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 0.26
25gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 1.0
26dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.0
27gb|AC104076.5| Homo sapiens BAC clone RP11-397C2 from 2, complet... 40 1.0
28dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 1.0
29gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 1.0
30emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003... 40 1.0
31gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 38 4.0
32gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 38 4.0
33emb|CR645972.2|CNS0EXEI Tetraodon nigroviridis full-length cDNA 38 4.0
34gb|AE012467.1| Xanthomonas campestris pv. campestris str. ATCC 3... 38 4.0
35dbj|AB243613.1| Monochoria vaginalis als1 gene for acetolactate ... 38 4.0
36dbj|AB243612.1| Monochoria vaginalis als1 gene for acetolactate ... 38 4.0
37dbj|AB243611.1| Monochoria vaginalis als1 gene for acetolactate ... 38 4.0
38dbj|AB243610.1| Monochoria vaginalis als1 gene for acetolactate ... 38 4.0
39dbj|AB243609.1| Monochoria vaginalis als1 gene for acetolactate ... 38 4.0
40dbj|AB243608.1| Monochoria vaginalis als1 gene for acetolactate ... 38 4.0
41dbj|AB243607.1| Monochoria vaginalis als1 gene for acetolactate ... 38 4.0
42dbj|AB243606.1| Monochoria vaginalis als1 gene for acetolactate ... 38 4.0
43gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 38 4.0
44gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 38 4.0
45dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 38 4.0
46gb|AE005093.1| Halobacterium sp. NRC-1 section 124 of 170 of the... 38 4.0
47gb|AF147703.1|AF147703 Streptomyces fradiae demethylmacrocin O-m... 38 4.0
48gb|AF055922.1|AF055922 Streptomyces fradiae dipeptidil carboxype... 38 4.0
49dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 38 4.0 
>ref|NM_191264.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1758

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                       
Query: 31  gcgccggcgccggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctg 90
           ||||||| ||||||||||||||| ||||||||||| ||||| ||||| || ||| |||||
Sbjct: 52  gcgccggggccggtgtgccgggatctgtggcacgcgtgcgctgggccggtggtgtcgctg 111

              
Query: 91  ccg 93
           |||
Sbjct: 112 ccg 114
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                            
Query: 31       gcgccggcgccggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctg 90
                ||||||| ||||||||||||||| ||||||||||| ||||| ||||| || ||| |||||
Sbjct: 31615945 gcgccggggccggtgtgccgggatctgtggcacgcgtgcgctgggccggtggtgtcgctg 31615886

                   
Query: 91       ccg 93
                |||
Sbjct: 31615885 ccg 31615883



 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 41       cggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctgccg 93
                ||||||||| ||| ||||||||||||||||| || ||||| | | ||||||||
Sbjct: 27500179 cggtgtgcctggagctgtggcacgcctgcgctggccccgtggcgccgctgccg 27500127



 Score = 46.1 bits (23), Expect = 0.017
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 55       ctgtggcacgcctgcgcggggcc 77
                |||||||||||||||||||||||
Sbjct: 40688416 ctgtggcacgcctgcgcggggcc 40688438
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>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0503C12
          Length = 147180

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                         
Query: 31    gcgccggcgccggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctg 90
             ||||||| ||||||||||||||| ||||||||||| ||||| ||||| || ||| |||||
Sbjct: 29677 gcgccggggccggtgtgccgggatctgtggcacgcgtgcgctgggccggtggtgtcgctg 29618

                
Query: 91    ccg 93
             |||
Sbjct: 29617 ccg 29615
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>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0435B05
          Length = 150997

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                          
Query: 31     gcgccggcgccggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctg 90
              ||||||| ||||||||||||||| ||||||||||| ||||| ||||| || ||| |||||
Sbjct: 128968 gcgccggggccggtgtgccgggatctgtggcacgcgtgcgctgggccggtggtgtcgctg 128909

                 
Query: 91     ccg 93
              |||
Sbjct: 128908 ccg 128906
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>dbj|AK072330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039P13, full
           insert sequence
          Length = 2944

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                       
Query: 31  gcgccggcgccggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctg 90
           ||||||| ||||||||||||||| ||||||||||| ||||| ||||| || ||| |||||
Sbjct: 521 gcgccggggccggtgtgccgggatctgtggcacgcgtgcgctgggccggtggtgtcgctg 580

              
Query: 91  ccg 93
           |||
Sbjct: 581 ccg 583
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>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06,
             complete sequence
          Length = 142068

 Score = 61.9 bits (31), Expect = 3e-07
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 35    cggcgccggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctgccg 93
             ||||| |||||||| |||| ||||||||||| ||||||||||| |  ||||||||||||
Sbjct: 90506 cggcggcggtgtgcggggagctgtggcacgcgtgcgcggggccaggggtggcgctgccg 90564
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 61.9 bits (31), Expect = 3e-07
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 35       cggcgccggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctgccg 93
                ||||| |||||||| |||| ||||||||||| ||||||||||| |  ||||||||||||
Sbjct: 25355902 cggcggcggtgtgcggggagctgtggcacgcgtgcgcggggccaggggtggcgctgccg 25355960



 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 41       cggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctgccg 93
                |||||||||  || ||||||||||||||||| |||||||| | | ||||||||
Sbjct: 27814377 cggtgtgcctcgagctgtggcacgcctgcgccgggcccgtggcgccgctgccg 27814429
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>ref|NM_191956.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2190

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 41  cggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctgccg 93
           ||||||||| ||| ||||||||||||||||| || ||||| | | ||||||||
Sbjct: 104 cggtgtgcctggagctgtggcacgcctgcgctggccccgtggcgccgctgccg 156
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>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0053D02, complete sequence
          Length = 157106

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 41    cggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctgccg 93
             |||||||||  || ||||||||||||||||| |||||||| | | ||||||||
Sbjct: 44794 cggtgtgcctcgagctgtggcacgcctgcgccgggcccgtggcgccgctgccg 44846
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>dbj|AP003706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1125_C04
          Length = 98476

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 41    cggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctgccg 93
             ||||||||| ||| ||||||||||||||||| || ||||| | | ||||||||
Sbjct: 20882 cggtgtgcctggagctgtggcacgcctgcgctggccccgtggcgccgctgccg 20830
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>dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E23, full
           insert sequence
          Length = 2712

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 41  cggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctgccg 93
           |||||||||  || ||||||||||||||||| |||||||| | | ||||||||
Sbjct: 325 cggtgtgcctcgagctgtggcacgcctgcgccgggcccgtggcgccgctgccg 377
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>dbj|AB071291.1| Oryza sativa OsETTIN2 mRNA for Arabidopsis ETTIN-like protein 2,
           complete cds
          Length = 2811

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 41  cggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctgccg 93
           ||||||||| ||| ||||||||||||||||| || ||||| | | ||||||||
Sbjct: 261 cggtgtgcctggagctgtggcacgcctgcgctggccccgtggcgccgctgccg 313
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>dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN-like protein 1,
           complete cds
          Length = 2622

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 41  cggtgtgccgggacctgtggcacgcctgcgcggggcccgtcgtggcgctgccg 93
           |||||||||  || ||||||||||||||||| |||||||| | | ||||||||
Sbjct: 217 cggtgtgcctcgagctgtggcacgcctgcgccgggcccgtggcgccgctgccg 269
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>ref|NM_189992.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2481

 Score = 46.1 bits (23), Expect = 0.017
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 55 ctgtggcacgcctgcgcggggcc 77
          |||||||||||||||||||||||
Sbjct: 58 ctgtggcacgcctgcgcggggcc 80
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.017
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 55       ctgtggcacgcctgcgcggggcc 77
                |||||||||||||||||||||||
Sbjct: 29142164 ctgtggcacgcctgcgcggggcc 29142186
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>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0093F16
          Length = 160925

 Score = 46.1 bits (23), Expect = 0.017
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 55     ctgtggcacgcctgcgcggggcc 77
              |||||||||||||||||||||||
Sbjct: 130394 ctgtggcacgcctgcgcggggcc 130416
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>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0596H10
          Length = 166570

 Score = 46.1 bits (23), Expect = 0.017
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 55     ctgtggcacgcctgcgcggggcc 77
              |||||||||||||||||||||||
Sbjct: 157151 ctgtggcacgcctgcgcggggcc 157173
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>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OJ1215_E11
          Length = 105301

 Score = 46.1 bits (23), Expect = 0.017
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 55   ctgtggcacgcctgcgcggggcc 77
            |||||||||||||||||||||||
Sbjct: 9451 ctgtggcacgcctgcgcggggcc 9473
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>dbj|AK103312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125G19, full
           insert sequence
          Length = 3550

 Score = 46.1 bits (23), Expect = 0.017
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 55  ctgtggcacgcctgcgcggggcc 77
           |||||||||||||||||||||||
Sbjct: 462 ctgtggcacgcctgcgcggggcc 484
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>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full
           insert sequence
          Length = 3151

 Score = 46.1 bits (23), Expect = 0.017
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 55  ctgtggcacgcctgcgcggggcc 77
           |||||||||||||||||||||||
Sbjct: 280 ctgtggcacgcctgcgcggggcc 302
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>dbj|AB071296.1| Oryza sativa OsARF7a mRNA for auxin response factor 7a, partial
          cds
          Length = 3372

 Score = 46.1 bits (23), Expect = 0.017
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 55 ctgtggcacgcctgcgcggggcc 77
          |||||||||||||||||||||||
Sbjct: 37 ctgtggcacgcctgcgcggggcc 59
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>dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds
          Length = 2376

 Score = 46.1 bits (23), Expect = 0.017
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 55 ctgtggcacgcctgcgcggggcc 77
          |||||||||||||||||||||||
Sbjct: 22 ctgtggcacgcctgcgcggggcc 44
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.065
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 27      ggacgcgccggcgccggtgtgccggg 52
               |||||||||||| |||||||||||||
Sbjct: 3951828 ggacgcgccggctccggtgtgccggg 3951853
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 30      cgcgccggcgccggtgtgccg 50
               |||||||||||||||||||||
Sbjct: 3264201 cgcgccggcgccggtgtgccg 3264221
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 32      cgccggcgccggtgtgccgg 51
               ||||||||||||||||||||
Sbjct: 5094307 cgccggcgccggtgtgccgg 5094288
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 32      cgccggcgccggtgtgccgg 51
               ||||||||||||||||||||
Sbjct: 5171417 cgccggcgccggtgtgccgg 5171436
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>gb|AC104076.5| Homo sapiens BAC clone RP11-397C2 from 2, complete sequence
          Length = 174622

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 63    cgcctgcgcggggcccgtcgtggc 86
             ||||||||||||| ||||||||||
Sbjct: 79757 cgcctgcgcgggggccgtcgtggc 79734
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 23      gcaaggacgcgccggcgccg 42
               ||||||||||||||||||||
Sbjct: 5489595 gcaaggacgcgccggcgccg 5489576
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 32      cgccggcgccggtgtgccgg 51
               ||||||||||||||||||||
Sbjct: 5171399 cgccggcgccggtgtgccgg 5171418
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>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124959

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    cgccggcgccggtgtgccgg 51
             ||||||||||||||||||||
Sbjct: 92182 cgccggcgccggtgtgccgg 92163
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 64     gcctgcgcggggcccgtcg 82
              |||||||||||||||||||
Sbjct: 114771 gcctgcgcggggcccgtcg 114753
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 63     cgcctgcgcggggcccgtc 81
              |||||||||||||||||||
Sbjct: 575439 cgcctgcgcggggcccgtc 575421
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>emb|CR645972.2|CNS0EXEI Tetraodon nigroviridis full-length cDNA
          Length = 1298

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 28 gacgcgccggcgccggtgt 46
          |||||||||||||||||||
Sbjct: 19 gacgcgccggcgccggtgt 37
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>gb|AE012467.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 375
            of 460 of the complete genome
          Length = 11889

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 33   gccggcgccggtgtgccgg 51
            |||||||||||||||||||
Sbjct: 6218 gccggcgccggtgtgccgg 6236
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>dbj|AB243613.1| Monochoria vaginalis als1 gene for acetolactate synthase, complete
           cds, country:Japan: Kyoto, Kameoka
          Length = 2103

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 11  cggacgagcctcgcaaggacgcg 33
           |||||||||||||||||| ||||
Sbjct: 194 cggacgagcctcgcaagggcgcg 216
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>dbj|AB243612.1| Monochoria vaginalis als1 gene for acetolactate synthase, complete
           cds, country:Japan: Kyoto, Kyotango, Zennoji
          Length = 2103

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 11  cggacgagcctcgcaaggacgcg 33
           |||||||||||||||||| ||||
Sbjct: 194 cggacgagcctcgcaagggcgcg 216
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>dbj|AB243611.1| Monochoria vaginalis als1 gene for acetolactate synthase, complete
           cds, country:Japan: Ibaragi, Ushiku
          Length = 2103

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 11  cggacgagcctcgcaaggacgcg 33
           |||||||||||||||||| ||||
Sbjct: 194 cggacgagcctcgcaagggcgcg 216
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>dbj|AB243610.1| Monochoria vaginalis als1 gene for acetolactate synthase, complete
           cds, country:Japan: Kyoto, Seika
          Length = 2103

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 11  cggacgagcctcgcaaggacgcg 33
           |||||||||||||||||| ||||
Sbjct: 194 cggacgagcctcgcaagggcgcg 216
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>dbj|AB243609.1| Monochoria vaginalis als1 gene for acetolactate synthase, complete
           cds, country:Japan: Kyoto, Maizuru
          Length = 2103

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 11  cggacgagcctcgcaaggacgcg 33
           |||||||||||||||||| ||||
Sbjct: 194 cggacgagcctcgcaagggcgcg 216
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>dbj|AB243608.1| Monochoria vaginalis als1 gene for acetolactate synthase, complete
           cds, country:Japan: Kyoto, Miyazu, Kamiseya
          Length = 2103

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 11  cggacgagcctcgcaaggacgcg 33
           |||||||||||||||||| ||||
Sbjct: 194 cggacgagcctcgcaagggcgcg 216
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>dbj|AB243607.1| Monochoria vaginalis als1 gene for acetolactate synthase, complete
           cds, country:Japan: Hyogo, Kasai
          Length = 2103

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 11  cggacgagcctcgcaaggacgcg 33
           |||||||||||||||||| ||||
Sbjct: 194 cggacgagcctcgcaagggcgcg 216
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>dbj|AB243606.1| Monochoria vaginalis als1 gene for acetolactate synthase, complete
           cds, country:Japan: Fukushima, Aizusakashita
          Length = 2103

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 11  cggacgagcctcgcaaggacgcg 33
           |||||||||||||||||| ||||
Sbjct: 194 cggacgagcctcgcaagggcgcg 216
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 33     gccggcgccggtgtgccgg 51
              |||||||||||||||||||
Sbjct: 819635 gccggcgccggtgtgccgg 819617
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 27     ggacgcgccggcgccggtg 45
              |||||||||||||||||||
Sbjct: 875577 ggacgcgccggcgccggtg 875595
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 25      aaggacgcgccggcgccgg 43
               |||||||||||||||||||
Sbjct: 5026462 aaggacgcgccggcgccgg 5026480
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>gb|AE005093.1| Halobacterium sp. NRC-1 section 124 of 170 of the complete genome
          Length = 12425

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 71   cggggcccgtcgtggcgct 89
            |||||||||||||||||||
Sbjct: 3553 cggggcccgtcgtggcgct 3535
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>gb|AF147703.1|AF147703 Streptomyces fradiae demethylmacrocin O-methyltransferase TylE
            (tylE), hypothetical NDP-hexose 4-ketoreductase TylD
            (tylD), tylodoxin (tylHII), cytochrome P450 TylHI
            (tylHI), macrocin-O-methyltransferase TylF (tylF), and
            putative NDP-hexose 3-epimerase TylJ (tylJ) genes,
            complete cds
          Length = 5833

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 30   cgcgccggcgccggtgtgccggg 52
            ||||||||||||||||| |||||
Sbjct: 1904 cgcgccggcgccggtgtcccggg 1926
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>gb|AF055922.1|AF055922 Streptomyces fradiae dipeptidil carboxypeptidase (ddcA), tylosin
            resistance protein (tlrB), glycosyltransferase (tylN),
            methyltransferase (tylE), 4-ketoreductase (tylD),
            ferredoxin (tylH2), cytochrome P450 (tylH1), macrocin
            O-methyltransferase (tylF), epimerase (tylJ), acyl-CoA
            oxydase (tylP), and butyrolactone receptor (tylQ) genes,
            complete cds
          Length = 12905

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 30   cgcgccggcgccggtgtgccggg 52
            ||||||||||||||||| |||||
Sbjct: 5846 cgcgccggcgccggtgtcccggg 5868
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 26      aggacgcgccggcgccggt 44
               |||||||||||||||||||
Sbjct: 1893593 aggacgcgccggcgccggt 1893611


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 413,611
Number of Sequences: 3902068
Number of extensions: 413611
Number of successful extensions: 38902
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37349
Number of HSP's gapped (non-prelim): 1553
length of query: 93
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 72
effective length of database: 17,151,101,840
effective search space: 1234879332480
effective search space used: 1234879332480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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