ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast37g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ566116.1|DME566116 Drosophila melanogaster retrotransposon... 46 0.020
2gb|AY561850.1| Drosophila melanogaster TART-A1 retrotransposon g... 46 0.020
3gb|AC163027.5| Mus musculus chromosome 5, clone RP23-396H22, com... 42 0.31
4emb|AL390294.19| Human DNA sequence from clone RP11-379F12 on ch... 42 0.31
5gb|AC129102.5| Homo sapiens 12 BAC RP11-284H19 (Roswell Park Can... 42 0.31
6dbj|AK123254.1| Homo sapiens cDNA FLJ41260 fis, clone BRAMY2034561 42 0.31
7gb|AY113347.1| Drosophila melanogaster GH16383 full insert cDNA 42 0.31
8ref|XM_943730.1| PREDICTED: Homo sapiens TAF3 RNA polymerase II,... 42 0.31
9ref|XM_291729.6| PREDICTED: Homo sapiens TAF3 RNA polymerase II,... 42 0.31
10gb|AC118599.24| Mus musculus chromosome 5, clone RP23-459G5, com... 42 0.31
11gb|AC163353.3| Mus musculus BAC clone RP23-55G7 from chromosome ... 40 1.2
12gb|AC091013.7| Homo sapiens chromosome 11, clone RP11-379P15, co... 40 1.2
13gb|AC105214.6| Homo sapiens chromosome 8, clone RP11-354G4, comp... 40 1.2
14gb|AC109324.4| Homo sapiens chromosome 8, clone CTD1-2308H5, com... 40 1.2
15gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, comple... 40 1.2
16dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.2
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.2
18gb|AF165423.6| Homo sapiens chromosome 3 clone CTB-402G2 map q, ... 40 1.2
19gb|AC083906.23| Homo sapiens 3 BAC RP11-93K22 (Roswell Park Canc... 40 1.2
20gb|AC009404.5| Homo sapiens BAC clone RP11-28H22 from 2, complet... 40 1.2
21gb|AC105916.4| Homo sapiens BAC clone RP11-180A12 from 4, comple... 40 1.2
22dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.2
23dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic D... 40 1.2
24emb|AJ277661.1|HSA277661 Homo sapiens partial LMO1 gene for LIM ... 40 1.2
25emb|CT009654.2| Medicago truncatula chromosome 5 clone mth2-17c1... 40 1.2
26dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 1.2
27gb|AC132228.3| Mus musculus BAC clone RP24-480G11 from 6, comple... 40 1.2
28emb|AL663092.15| Mouse DNA sequence from clone RP23-91I20 on chr... 40 1.2
29ref|XM_466651.1| Oryza sativa (japonica cultivar-group), mRNA 38 4.9
30ref|XM_421031.1| PREDICTED: Gallus gallus similar to serine/thre... 38 4.9
31ref|XM_857593.1| PREDICTED: Canis familiaris similar to brain-se... 38 4.9
32ref|XM_845826.1| PREDICTED: Canis familiaris similar to brain-se... 38 4.9
33ref|XM_857539.1| PREDICTED: Canis familiaris similar to brain-se... 38 4.9
34ref|XM_540779.2| PREDICTED: Canis familiaris similar to brain-se... 38 4.9
35ref|XM_857501.1| PREDICTED: Canis familiaris similar to brain-se... 38 4.9
36ref|XM_857474.1| PREDICTED: Canis familiaris similar to brain-se... 38 4.9
37emb|AL161915.8| Human DNA sequence from clone RP11-56P23 on chro... 38 4.9
38emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chrom... 38 4.9
39gb|AC154141.7| Mus musculus chromosome 7, clone RP24-343G19, com... 38 4.9
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.9
41gb|AC009741.5|AC009741 Drosophila melanogaster, chromosome 3R, r... 38 4.9
42gb|AC004108.1|AC004108 Homo sapiens chromosome 17, clone HCIT342... 38 4.9
43dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.9
44dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic D... 38 4.9
45emb|AL691499.8| Mouse DNA sequence from clone RP23-45O6 on chrom... 38 4.9
46dbj|AP000375.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 38 4.9
47dbj|AK120177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.9
48dbj|AK100424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.9
49gb|AY106894.1| Zea mays PCO141871 mRNA sequence 38 4.9
50gb|AE003695.2| Drosophila melanogaster chromosome 3R, section 33... 38 4.9
51gb|DQ180308.1| Fragaria x ananassa clone PBCESTFXA3 SSR marker 38 4.9
52emb|AL732492.11| Mouse DNA sequence from clone RP23-307C17 on ch... 38 4.9 
>emb|AJ566116.1|DME566116 Drosophila melanogaster retrotransposon TART-A, clone 17G23
          Length = 15576

 Score = 46.1 bits (23), Expect = 0.020
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 3    ccaaaaacccctcacccctctcc 25
            |||||||||||||||||||||||
Sbjct: 4848 ccaaaaacccctcacccctctcc 4870
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>gb|AY561850.1| Drosophila melanogaster TART-A1 retrotransposon gag protein and pol
            protein genes, complete cds
          Length = 13424

 Score = 46.1 bits (23), Expect = 0.020
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 3    ccaaaaacccctcacccctctcc 25
            |||||||||||||||||||||||
Sbjct: 2673 ccaaaaacccctcacccctctcc 2695
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>gb|AC163027.5| Mus musculus chromosome 5, clone RP23-396H22, complete sequence
          Length = 216377

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 24     ccaaaaccctaaaccctcccc 44
              |||||||||||||||||||||
Sbjct: 214150 ccaaaaccctaaaccctcccc 214130
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>emb|AL390294.19| Human DNA sequence from clone RP11-379F12 on chromosome 10 Contains the
             3' end of the TAF3 gene for TAF3 RNA polymerase II, TATA
             box binding protein (TBP)-associated factor, 140kDa
             (TAF140,TAFII140), the GATA3 gene for GATA binding protein
             3 (HDR,MGC5445), two novel genes and 3 CpG islands,
             complete sequence
          Length = 151559

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     acccctcacccctctccaaaa 29
             |||||||||||||||||||||
Sbjct: 14141 acccctcacccctctccaaaa 14121
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>gb|AC129102.5| Homo sapiens 12 BAC RP11-284H19 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 59942

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 12   cctcacccctctccaaaaccc 32
            |||||||||||||||||||||
Sbjct: 4178 cctcacccctctccaaaaccc 4158
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>dbj|AK123254.1| Homo sapiens cDNA FLJ41260 fis, clone BRAMY2034561
          Length = 2377

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 9   acccctcacccctctccaaaa 29
           |||||||||||||||||||||
Sbjct: 341 acccctcacccctctccaaaa 321
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>gb|AY113347.1| Drosophila melanogaster GH16383 full insert cDNA
          Length = 1334

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 5   aaaaacccctcacccctctcc 25
           |||||||||||||||||||||
Sbjct: 166 aaaaacccctcacccctctcc 146
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>ref|XM_943730.1| PREDICTED: Homo sapiens TAF3 RNA polymerase II, TATA box binding
            protein (TBP)-associated factor, 140kDa (TAF3), mRNA
          Length = 7357

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 9    acccctcacccctctccaaaa 29
            |||||||||||||||||||||
Sbjct: 5327 acccctcacccctctccaaaa 5307
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>ref|XM_291729.6| PREDICTED: Homo sapiens TAF3 RNA polymerase II, TATA box binding
            protein (TBP)-associated factor, 140kDa (TAF3), mRNA
          Length = 7408

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 9    acccctcacccctctccaaaa 29
            |||||||||||||||||||||
Sbjct: 5378 acccctcacccctctccaaaa 5358
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>gb|AC118599.24| Mus musculus chromosome 5, clone RP23-459G5, complete sequence
          Length = 194003

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   ccaaaaccctaaaccctcccc 44
            |||||||||||||||||||||
Sbjct: 1197 ccaaaaccctaaaccctcccc 1177
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>gb|AC163353.3| Mus musculus BAC clone RP23-55G7 from chromosome 6, complete sequence
          Length = 264135

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     ccaaaaccctaaaccctccc 43
              ||||||||||||||||||||
Sbjct: 159549 ccaaaaccctaaaccctccc 159568
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>gb|AC091013.7| Homo sapiens chromosome 11, clone RP11-379P15, complete sequence
          Length = 223741

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    cacacaccatgagggctccc 101
             ||||||||||||||||||||
Sbjct: 38387 cacacaccatgagggctccc 38368
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>gb|AC105214.6| Homo sapiens chromosome 8, clone RP11-354G4, complete sequence
          Length = 158209

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     accaaaaacccctcacccct 21
             ||||||||||||||||||||
Sbjct: 66249 accaaaaacccctcacccct 66268
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>gb|AC109324.4| Homo sapiens chromosome 8, clone CTD1-2308H5, complete sequence
          Length = 67922

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     accaaaaacccctcacccct 21
             ||||||||||||||||||||
Sbjct: 39338 accaaaaacccctcacccct 39357
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>gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, complete sequence
          Length = 104285

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     accaaaaacccctcacccctctcc 25
             |||||| |||||||||||||||||
Sbjct: 37237 accaaagacccctcacccctctcc 37260
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 18      ccctctccaaaaccctaaac 37
               ||||||||||||||||||||
Sbjct: 9998797 ccctctccaaaaccctaaac 9998778
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 18      ccctctccaaaaccctaaac 37
               ||||||||||||||||||||
Sbjct: 8922729 ccctctccaaaaccctaaac 8922748
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>gb|AF165423.6| Homo sapiens chromosome 3 clone CTB-402G2 map q, complete sequence
          Length = 125891

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     accaaaaacccctcacccct 21
             ||||||||||||||||||||
Sbjct: 35220 accaaaaacccctcacccct 35239
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>gb|AC083906.23| Homo sapiens 3 BAC RP11-93K22 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 167875

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    accaaaaacccctcacccct 21
            ||||||||||||||||||||
Sbjct: 5105 accaaaaacccctcacccct 5124
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>gb|AC009404.5| Homo sapiens BAC clone RP11-28H22 from 2, complete sequence
          Length = 112883

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaccaaaaacccctcacccc 20
             ||||||||||||||||||||
Sbjct: 86589 aaccaaaaacccctcacccc 86608
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>gb|AC105916.4| Homo sapiens BAC clone RP11-180A12 from 4, complete sequence
          Length = 104269

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     accaaaaacccctcacccct 21
             ||||||||||||||||||||
Sbjct: 81002 accaaaaacccctcacccct 81021
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>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0466E03
          Length = 138343

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ccctctccaaaaccctaaac 37
             ||||||||||||||||||||
Sbjct: 28101 ccctctccaaaaccctaaac 28082
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>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528B02
          Length = 144495

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    ccctctccaaaaccctaaac 37
             ||||||||||||||||||||
Sbjct: 88358 ccctctccaaaaccctaaac 88377
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>emb|AJ277661.1|HSA277661 Homo sapiens partial LMO1 gene for LIM domain only 1 protein, exon 1
          Length = 131145

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     cacacaccatgagggctccc 101
              ||||||||||||||||||||
Sbjct: 106797 cacacaccatgagggctccc 106816
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>emb|CT009654.2| Medicago truncatula chromosome 5 clone mth2-17c15, COMPLETE SEQUENCE
          Length = 126536

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tctccaaaaccctaaaccct 40
             ||||||||||||||||||||
Sbjct: 78910 tctccaaaaccctaaaccct 78929
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>dbj|AP001561.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-732G1, complete
              sequences
          Length = 195800

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      caaaaacccctcacccctct 23
              ||||||||||||||||||||
Sbjct: 139351 caaaaacccctcacccctct 139370
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>gb|AC132228.3| Mus musculus BAC clone RP24-480G11 from 6, complete sequence
          Length = 180203

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     ccaaaaccctaaaccctccc 43
              ||||||||||||||||||||
Sbjct: 138448 ccaaaaccctaaaccctccc 138467
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>emb|AL663092.15| Mouse DNA sequence from clone RP23-91I20 on chromosome 2, complete
             sequence
          Length = 207554

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    cacacaccatgagggctccc 101
             ||||||||||||||||||||
Sbjct: 27401 cacacaccatgagggctccc 27382
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>ref|XM_466651.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2967

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 20 ctctccaaaaccctaaaccctcc 42
          |||||||||||||||| ||||||
Sbjct: 31 ctctccaaaaccctaacccctcc 53
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>ref|XM_421031.1| PREDICTED: Gallus gallus similar to serine/threonine kinase 29;
            chromosome 11 open reading frame 7 (LOC423098), mRNA
          Length = 2698

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 9    acccctcacccctctccaa 27
            |||||||||||||||||||
Sbjct: 1694 acccctcacccctctccaa 1712
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>ref|XM_857593.1| PREDICTED: Canis familiaris similar to brain-selective kinase 2
            isoform gamma, transcript variant 6 (LOC483658), mRNA
          Length = 1981

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 9    acccctcacccctctccaa 27
            |||||||||||||||||||
Sbjct: 1111 acccctcacccctctccaa 1129
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>ref|XM_845826.1| PREDICTED: Canis familiaris similar to brain-selective kinase 2
            isoform gamma, transcript variant 2 (LOC483658), mRNA
          Length = 2031

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 9    acccctcacccctctccaa 27
            |||||||||||||||||||
Sbjct: 1111 acccctcacccctctccaa 1129
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>ref|XM_857539.1| PREDICTED: Canis familiaris similar to brain-selective kinase 2
            isoform gamma, transcript variant 5 (LOC483658), mRNA
          Length = 1983

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 9    acccctcacccctctccaa 27
            |||||||||||||||||||
Sbjct: 1111 acccctcacccctctccaa 1129
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>ref|XM_540779.2| PREDICTED: Canis familiaris similar to brain-selective kinase 2
            isoform gamma, transcript variant 1 (LOC483658), mRNA
          Length = 1911

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 9    acccctcacccctctccaa 27
            |||||||||||||||||||
Sbjct: 1177 acccctcacccctctccaa 1195
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>ref|XM_857501.1| PREDICTED: Canis familiaris similar to brain-selective kinase 2
            isoform gamma, transcript variant 4 (LOC483658), mRNA
          Length = 2145

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 9    acccctcacccctctccaa 27
            |||||||||||||||||||
Sbjct: 1387 acccctcacccctctccaa 1405
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>ref|XM_857474.1| PREDICTED: Canis familiaris similar to brain-selective kinase 2
            isoform gamma, transcript variant 3 (LOC483658), mRNA
          Length = 2043

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 9    acccctcacccctctccaa 27
            |||||||||||||||||||
Sbjct: 1309 acccctcacccctctccaa 1327
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>emb|AL161915.8| Human DNA sequence from clone RP11-56P23 on chromosome 1 Contains the
            3' end of a variant of a novel gene (FLJ32112), complete
            sequence
          Length = 23726

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 2    accaaaaacccctcacccc 20
            |||||||||||||||||||
Sbjct: 5751 accaaaaacccctcacccc 5733
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>emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chromosome 9; segment 5/5
          Length = 281723

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    aaaaccctaaaccctcccc 44
             |||||||||||||||||||
Sbjct: 89699 aaaaccctaaaccctcccc 89717
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>gb|AC154141.7| Mus musculus chromosome 7, clone RP24-343G19, complete sequence
          Length = 178391

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    ctccaaaaccctaaaccct 40
             |||||||||||||||||||
Sbjct: 45977 ctccaaaaccctaaaccct 45995
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 20       ctctccaaaaccctaaaccctcc 42
                |||||||||||||||| ||||||
Sbjct: 23894214 ctctccaaaaccctaacccctcc 23894192
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>gb|AC009741.5|AC009741 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone
             BACR44K17, complete sequence
          Length = 166863

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     acccctcacccctctccaa 27
             |||||||||||||||||||
Sbjct: 93935 acccctcacccctctccaa 93917
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>gb|AC004108.1|AC004108 Homo sapiens chromosome 17, clone HCIT342E3, complete sequence
          Length = 92312

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     aaacccctcacccctctcc 25
             |||||||||||||||||||
Sbjct: 11869 aaacccctcacccctctcc 11851
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>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0030C08
          Length = 163423

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 20     ctctccaaaaccctaaaccctcc 42
              |||||||||||||||| ||||||
Sbjct: 115880 ctctccaaaaccctaacccctcc 115858
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>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0496E03
          Length = 138622

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 20    ctctccaaaaccctaaaccctcc 42
             |||||||||||||||| ||||||
Sbjct: 28178 ctctccaaaaccctaacccctcc 28156
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>emb|AL691499.8| Mouse DNA sequence from clone RP23-45O6 on chromosome X, complete
             sequence
          Length = 179370

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 3     ccaaaaacccctcacccctctcc 25
             ||||||||||||| |||||||||
Sbjct: 86904 ccaaaaacccctctcccctctcc 86926
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>dbj|AP000375.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MJG19
          Length = 62948

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    tccaaaaccctaaaccctc 41
             |||||||||||||||||||
Sbjct: 39053 tccaaaaccctaaaccctc 39035
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>dbj|AK120177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033F11,
          full insert sequence
          Length = 2323

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 20 ctctccaaaaccctaaaccctcc 42
          |||||||||||||||| ||||||
Sbjct: 29 ctctccaaaaccctaacccctcc 51
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>dbj|AK100424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088B16,
          full insert sequence
          Length = 2967

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 20 ctctccaaaaccctaaaccctcc 42
          |||||||||||||||| ||||||
Sbjct: 31 ctctccaaaaccctaacccctcc 53
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>gb|AY106894.1| Zea mays PCO141871 mRNA sequence
          Length = 1688

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                         
Query: 10 cccctcacccctctccaaaaccctaaaccct 40
          |||||| ||||||||||| |||| |||||||
Sbjct: 69 cccctctcccctctccaagacccaaaaccct 99
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>gb|AE003695.2| Drosophila melanogaster chromosome 3R, section 33 of 118 of the complete
              sequence
          Length = 225655

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 9      acccctcacccctctccaa 27
              |||||||||||||||||||
Sbjct: 125230 acccctcacccctctccaa 125212
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>gb|DQ180308.1| Fragaria x ananassa clone PBCESTFXA3 SSR marker
          Length = 882

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 24  ccaaaaccctaaaccctcc 42
           |||||||||||||||||||
Sbjct: 208 ccaaaaccctaaaccctcc 226
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>emb|AL732492.11| Mouse DNA sequence from clone RP23-307C17 on chromosome 4, complete
             sequence
          Length = 166942

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    cccctcacccctctccaaa 28
             |||||||||||||||||||
Sbjct: 52483 cccctcacccctctccaaa 52465


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 746,137
Number of Sequences: 3902068
Number of extensions: 746137
Number of successful extensions: 51752
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51573
Number of HSP's gapped (non-prelim): 179
length of query: 108
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 87
effective length of database: 17,151,101,840
effective search space: 1492145860080
effective search space used: 1492145860080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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