ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast37e11 |
|---|---|
| Clone Library Name | barley_pub |
>STAD_SOYBN (Q42807) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 411 Score = 40.4 bits (93), Expect = 0.001 Identities = 16/18 (88%), Positives = 17/18 (94%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F PP+EVHVQVTHSMPPQ Sbjct: 46 FTPPREVHVQVTHSMPPQ 63
>STAD_RICCO (P22337) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase) Length = 396 Score = 40.0 bits (92), Expect = 0.001 Identities = 16/18 (88%), Positives = 17/18 (94%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F PP+EVHVQVTHSMPPQ Sbjct: 51 FMPPREVHVQVTHSMPPQ 68
>STAD_CARTI (P22243) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 396 Score = 40.0 bits (92), Expect = 0.001 Identities = 16/18 (88%), Positives = 17/18 (94%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F PP+EVHVQVTHSMPPQ Sbjct: 51 FQPPREVHVQVTHSMPPQ 68
>STAD_ELAGV (O24428) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 393 Score = 40.0 bits (92), Expect = 0.001 Identities = 16/18 (88%), Positives = 17/18 (94%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F PP+EVHVQVTHSMPPQ Sbjct: 48 FMPPREVHVQVTHSMPPQ 65
>STAD_SOLCO (Q41319) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 393 Score = 39.7 bits (91), Expect = 0.002 Identities = 15/18 (83%), Positives = 18/18 (100%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F+PP+EVHVQVTHSMPP+ Sbjct: 48 FSPPREVHVQVTHSMPPE 65
>STAD_SOLTU (P46253) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 393 Score = 39.3 bits (90), Expect = 0.002 Identities = 15/18 (83%), Positives = 17/18 (94%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F PP+EVHVQVTHSMPP+ Sbjct: 48 FTPPREVHVQVTHSMPPE 65
>STAD_BRANA (P29108) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 398 Score = 39.3 bits (90), Expect = 0.002 Identities = 16/18 (88%), Positives = 16/18 (88%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F PPKEVHVQV HSMPPQ Sbjct: 53 FTPPKEVHVQVLHSMPPQ 70
>STAD_CUCSA (P32061) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 396 Score = 38.9 bits (89), Expect = 0.003 Identities = 15/18 (83%), Positives = 17/18 (94%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F PP+EVH+QVTHSMPPQ Sbjct: 51 FMPPREVHLQVTHSMPPQ 68
>STADS_BRANA (Q01771) Acyl-[acyl-carrier-protein] desaturase, seed specific,| chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 399 Score = 37.0 bits (84), Expect = 0.012 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F PP+EVH+QV HSMPPQ Sbjct: 54 FTPPREVHLQVLHSMPPQ 71
>STAD_SPIOL (P28645) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 399 Score = 36.6 bits (83), Expect = 0.016 Identities = 14/18 (77%), Positives = 17/18 (94%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F+PP+EVHVQVTHSMP + Sbjct: 54 FSPPREVHVQVTHSMPQE 71
>STAD_HELAN (Q96456) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 396 Score = 35.8 bits (81), Expect = 0.027 Identities = 14/18 (77%), Positives = 15/18 (83%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F PP+EVH QV HSMPPQ Sbjct: 51 FTPPREVHQQVLHSMPPQ 68
>STAD_GOSHI (Q42770) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 397 Score = 35.4 bits (80), Expect = 0.035 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPP 344 F PPKEV VQ+THSMPP Sbjct: 51 FTPPKEVPVQITHSMPP 67
>STAD_OLEEU (Q43593) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 390 Score = 35.0 bits (79), Expect = 0.046 Identities = 13/18 (72%), Positives = 16/18 (88%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 F PP+EVHVQVTHS+ P+ Sbjct: 45 FTPPREVHVQVTHSLAPE 62
>STAD_ORYSA (Q40731) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 390 Score = 34.7 bits (78), Expect = 0.060 Identities = 12/18 (66%), Positives = 16/18 (88%) Frame = +3 Query: 294 FAPPKEVHVQVTHSMPPQ 347 + PP+EVH+QV HS+PPQ Sbjct: 45 YTPPREVHLQVKHSLPPQ 62
>STAD_SIMCH (Q01753) Acyl-[acyl-carrier-protein] desaturase, chloroplast| precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) Length = 398 Score = 34.3 bits (77), Expect = 0.078 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = +3 Query: 300 PPKEVHVQVTHSMPPQ 347 PP+E HVQ THSMPPQ Sbjct: 55 PPREAHVQKTHSMPPQ 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,653,939 Number of Sequences: 219361 Number of extensions: 321759 Number of successful extensions: 792 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 765 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 792 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
