>ref|NM_189484.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1011

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 380 agccacgagagcgacatggacctggccatgctcgtcagcgacttcct 426
           |||||||||||||| |||||  ||||||||||||||| |||||||||
Sbjct: 175 agccacgagagcgagatggatttggccatgctcgtcaccgacttcct 221

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 380      agccacgagagcgacatggacctggccatgctcgtcagcgacttcct 426
                |||||||||||||| |||||  ||||||||||||||| |||||||||
Sbjct: 43009537 agccacgagagcgagatggatttggccatgctcgtcaccgacttcct 43009583

>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0698H10
          Length = 153449

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                             
Query: 380    agccacgagagcgacatggacctggccatgctcgtcagcgacttcct 426
              |||||||||||||| |||||  ||||||||||||||| |||||||||
Sbjct: 110416 agccacgagagcgagatggatttggccatgctcgtcaccgacttcct 110462

>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0459B04
          Length = 142475

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                           
Query: 380  agccacgagagcgacatggacctggccatgctcgtcagcgacttcct 426
            |||||||||||||| |||||  ||||||||||||||| |||||||||
Sbjct: 6566 agccacgagagcgagatggatttggccatgctcgtcaccgacttcct 6612

>dbj|AK099265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011G21, full
           insert sequence
          Length = 1502

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 380 agccacgagagcgacatggacctggccatgctcgtcagcgacttcct 426
           |||||||||||||| |||||  ||||||||||||||| |||||||||
Sbjct: 192 agccacgagagcgagatggatttggccatgctcgtcaccgacttcct 238

>dbj|AK099263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011E21, full
           insert sequence
          Length = 1502

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 380 agccacgagagcgacatggacctggccatgctcgtcagcgacttcct 426
           |||||||||||||| |||||  ||||||||||||||| |||||||||
Sbjct: 192 agccacgagagcgagatggatttggccatgctcgtcaccgacttcct 238

>dbj|AK071351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092O22, full
           insert sequence
          Length = 1564

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 380 agccacgagagcgacatggacctggccatgctcgtcagcgacttcct 426
           |||||||||||||| |||||  ||||||||||||||| |||||||||
Sbjct: 256 agccacgagagcgagatggatttggccatgctcgtcaccgacttcct 302

>gb|AC164973.4| Ornithorhynchus anatinus BAC clone OABb-265H16 from chromosome unknown,
             complete sequence
          Length = 129291

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 8     tccccacccccaattcccctcc 29
             ||||||||||||||||||||||
Sbjct: 21623 tccccacccccaattcccctcc 21644

>gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, complete sequence
          Length = 156547

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 10     cccacccccaattcccctccc 30
              |||||||||||||||||||||
Sbjct: 121088 cccacccccaattcccctccc 121108

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 427    cgagggcggccccggcggcgcctgcggtg 455
              ||||||||| |||||||||||| ||||||
Sbjct: 676543 cgagggcgggcccggcggcgccggcggtg 676515

>gb|AC159321.3| Mus musculus BAC clone RP23-18G14 from chromosome 6, complete sequence
          Length = 202584

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 8     tccccacccccaattcccctc 28
             |||||||||||||||||||||
Sbjct: 95876 tccccacccccaattcccctc 95856

>gb|AC132279.4| Mus musculus BAC clone RP24-346M3 from chromosome 6, complete sequence
          Length = 173744

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     tccccacccccaattcccctc 28
             |||||||||||||||||||||
Sbjct: 12003 tccccacccccaattcccctc 12023

>gb|AC103934.10| Mus musculus chromosome 6, clone RP23-287O14, complete sequence
          Length = 208817

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 8      tccccacccccaattcccctc 28
              |||||||||||||||||||||
Sbjct: 129030 tccccacccccaattcccctc 129050

>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13
          Length = 342416

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 427    cgagggcggccccggcggcgcctgcggtg 455
              ||||||||| |||||||||||| ||||||
Sbjct: 333185 cgagggcgggcccggcggcgccggcggtg 333157

>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
            3/14
          Length = 320050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 427  cgagggcggccccggcggcgcctgcggtg 455
            ||||||||| |||||||||||| ||||||
Sbjct: 9335 cgagggcgggcccggcggcgccggcggtg 9307

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 216     agttcggcgcgctgtccccgc 236
               |||||||||||||||||||||
Sbjct: 3154328 agttcggcgcgctgtccccgc 3154348

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 224     gcgctgtccccgccgggcgcggcgcagcg 252
               |||||||||| || |||||||||||||||
Sbjct: 4802324 gcgctgtcccggcggggcgcggcgcagcg 4802352

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 236    ccgggcgcggcgcagcggagg 256
              |||||||||||||||||||||
Sbjct: 889383 ccgggcgcggcgcagcggagg 889363

>emb|AL672270.12| Mouse DNA sequence from clone RP23-351A10 on chromosome X, complete
              sequence
          Length = 220691

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 8      tccccacccccaattcccctc 28
              |||||||||||||||||||||
Sbjct: 195429 tccccacccccaattcccctc 195409

>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0093E24, complete sequence
          Length = 146492

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   gcgcggcgcagcggaggtgg 259
             ||||||||||||||||||||
Sbjct: 81150 gcgcggcgcagcggaggtgg 81169

>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence
          Length = 243006

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     cccccaattcccctccctcc 33
              ||||||||||||||||||||
Sbjct: 164548 cccccaattcccctccctcc 164567

>emb|AJ969053.1| Hordeum vulgare mRNA for glycosyltransferase (pglcat7 gene)
          Length = 1523

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 254 aggtgggccccgccgtccacggcg 277
           |||||||| |||||||||||||||
Sbjct: 926 aggtgggcgccgccgtccacggcg 903

>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    ggccaaggagttcggcgcgc 227
              ||||||||||||||||||||
Sbjct: 275657 ggccaaggagttcggcgcgc 275638

>ref|NM_001016886.2| Xenopus tropicalis sodium channel, voltage-gated, type 8, alpha
           polypeptide (scn8a), mRNA
          Length = 1889

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 438 ccggcggcgcctgcggtgactcgc 461
           |||||||||||||||| |||||||
Sbjct: 28  ccggcggcgcctgcggggactcgc 51

>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    ccccgccgtccacggcgagg 280
              ||||||||||||||||||||
Sbjct: 245441 ccccgccgtccacggcgagg 245460

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 427     cgagggcggccccggcggcg 446
               ||||||||||||||||||||
Sbjct: 1468202 cgagggcggccccggcggcg 1468183

>gb|AC099683.1| Caenorhabditis briggsae cosmid CB046A04, complete sequence
          Length = 102867

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    ttccccgtcccaatccccca 107
             ||||||||||||||||||||
Sbjct: 78666 ttccccgtcccaatccccca 78647

>gb|AF403708.1|AF403708 Streptomyces peucetius subsp. caesius daunomycin C-14 hydroxylase
           (doxA) gene, complete cds
          Length = 1932

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 255 ggtgggccccgccgtccacggcga 278
           |||||||| |||||||||||||||
Sbjct: 900 ggtgggcctcgccgtccacggcga 877

>gb|AY523557.1| Uncultured organism clone L5-18 chitinase gene, partial cds
          Length = 441

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 432 gcggccccggcggcgcctgcggtg 455
           |||||||||||| |||||||||||
Sbjct: 166 gcggccccggcgtcgcctgcggtg 189

>gb|AY129335.1| Mycobacteriophage Corndog, complete genome
          Length = 69777

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   ggggcgggtcgccggtcgcg 310
             ||||||||||||||||||||
Sbjct: 58409 ggggcgggtcgccggtcgcg 58428

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 458     tcgcgcggcagcagcgacgg 477
               ||||||||||||||||||||
Sbjct: 3906094 tcgcgcggcagcagcgacgg 3906075

>emb|CR377476.1| Pinus pinaster SSR, clone PPA6B03
          Length = 714

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 64  cggcgaggaggagccaacccccaa 87
           |||||||||||||| |||||||||
Sbjct: 468 cggcgaggaggagcaaacccccaa 491

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     gcgcggcgcagcggaggtgg 259
               ||||||||||||||||||||
Sbjct: 8158917 gcgcggcgcagcggaggtgg 8158936

>gb|AY107381.1| Zea mays PCO061330 mRNA sequence
          Length = 1531

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 233 ccgccgggcgcggcgcagcggagg 256
           |||||||||||||||| |||||||
Sbjct: 141 ccgccgggcgcggcgcggcggagg 118

>emb|CR848577.2| Xenopus tropicalis finished cDNA, clone TEgg142o08
          Length = 1889

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 438 ccggcggcgcctgcggtgactcgc 461
           |||||||||||||||| |||||||
Sbjct: 28  ccggcggcgcctgcggggactcgc 51

>gb|U77891.1|SPU77891 Streptomyces peucetius daunorubicin C-14 hydroxylase (doxA),
            doxorubicin biosynthesis enzyme DnrV (dnrV), daunorubicin
            C-13 ketoreductase (dnrU), daunorubicin acyl carrier
            protein (dpsG), daunorubicin biosynthesis enzyme (dpsH),
            doxorubicin biosynthesis protein DnmT (dnmT), and
            putative baumycin biosynthesis protein (dnrH) genes,
            complete cds
          Length = 6985

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 255  ggtgggccccgccgtccacggcga 278
            |||||||| |||||||||||||||
Sbjct: 1042 ggtgggcctcgccgtccacggcga 1065

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 263     ccgccgtccacggcgagggtttcg 286
               ||||||| ||||||||||||||||
Sbjct: 2698317 ccgccgtgcacggcgagggtttcg 2698294


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,904,569
Number of Sequences: 3902068
Number of extensions: 2904569
Number of successful extensions: 62341
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61001
Number of HSP's gapped (non-prelim): 1340
length of query: 477
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 455
effective length of database: 17,147,199,772
effective search space: 7801975896260
effective search space used: 7801975896260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)