ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast37b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1STAD_SPIOL (P28645) Acyl-[acyl-carrier-protein] desaturase, chlo... 47 2e-05
2STAD_ORYSA (Q40731) Acyl-[acyl-carrier-protein] desaturase, chlo... 47 2e-05
3STAD_SIMCH (Q01753) Acyl-[acyl-carrier-protein] desaturase, chlo... 46 4e-05
4STAD_SOYBN (Q42807) Acyl-[acyl-carrier-protein] desaturase, chlo... 45 8e-05
5STAD_SOLTU (P46253) Acyl-[acyl-carrier-protein] desaturase, chlo... 44 1e-04
6STAD_RICCO (P22337) Acyl-[acyl-carrier-protein] desaturase, chlo... 44 2e-04
7STAD_CUCSA (P32061) Acyl-[acyl-carrier-protein] desaturase, chlo... 43 3e-04
8STAD_GOSHI (Q42770) Acyl-[acyl-carrier-protein] desaturase, chlo... 43 4e-04
9STAD_OLEEU (Q43593) Acyl-[acyl-carrier-protein] desaturase, chlo... 42 5e-04
10STAD_BRANA (P29108) Acyl-[acyl-carrier-protein] desaturase, chlo... 41 0.001
11STAD_SOLCO (Q41319) Acyl-[acyl-carrier-protein] desaturase, chlo... 41 0.001
12STAD_ELAGV (O24428) Acyl-[acyl-carrier-protein] desaturase, chlo... 41 0.001
13STAD_CARTI (P22243) Acyl-[acyl-carrier-protein] desaturase, chlo... 41 0.001
14STAD_HELAN (Q96456) Acyl-[acyl-carrier-protein] desaturase, chlo... 40 0.002
15STAD_CORSA (P32063) Omega-12 acyl-[acyl-carrier-protein] desatur... 40 0.002
16STADS_BRANA (Q01771) Acyl-[acyl-carrier-protein] desaturase, see... 39 0.007
17VIE2_HCMVA (P19893) 45 kDa immediate-early protein 2 (IE2) (UL12... 31 1.5
18GRPE2_PONPY (Q5R435) GrpE protein homolog 2, mitochondrial precu... 30 2.5
19GRPE2_HUMAN (Q8TAA5) GrpE protein homolog 2, mitochondrial precu... 30 2.5
20PININ_CANFA (P79149) Pinin 29 4.3
21PHY_ADICA (P42496) Phytochrome 1 29 5.7
22PPRB_HUMAN (Q15648) Peroxisome proliferator-activated receptor-b... 28 7.4
23Y1699_PYRHO (O59362) UPF0095 protein PH1699 28 7.4
24UPL2_ARATH (Q8H0T4) E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-... 28 9.7

>STAD_SPIOL (P28645) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 399

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P+E+ E+ +SL GW  EN+L  L PVE  WQP D+L
Sbjct: 68  MPQEKIEIFKSLEGWAEENLLVHLKPVEKCWQPQDYL 104



to top

>STAD_ORYSA (Q40731) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 390

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 20/37 (54%), Positives = 25/37 (67%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P ++ E+  SL  W  EN+L LL PVE SWQP DFL
Sbjct: 59  LPPQKREIFDSLQPWAKENLLNLLKPVEKSWQPQDFL 95



to top

>STAD_SIMCH (Q01753) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 398

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P ++ E+ +SL GW  EN+L  L PVE  WQP DFL
Sbjct: 67  MPPQKIEIFKSLEGWAEENVLVHLKPVEKCWQPQDFL 103



to top

>STAD_SOYBN (Q42807) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 411

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P ++ E+ QSL  W  EN+L  L PVE  WQP DFL
Sbjct: 60  MPPQKIEIFQSLEDWAEENILAHLKPVEKCWQPQDFL 96



to top

>STAD_SOLTU (P46253) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 393

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P E+ E+  SL  W A+N+L  L PVE  WQP DFL
Sbjct: 62  MPPEKIEVFDSLRDWAAQNLLVHLKPVEKCWQPTDFL 98



to top

>STAD_RICCO (P22337) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
           (Delta(9) stearoyl-acyl carrier protein desaturase)
          Length = 396

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 18/37 (48%), Positives = 25/37 (67%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P ++ E+ +SL+ W  EN+L  L PVE  WQP DFL
Sbjct: 65  MPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFL 101



to top

>STAD_CUCSA (P32061) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 396

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P ++ E+ +SL  W  EN+L  L PVE  WQP DFL
Sbjct: 65  MPPQKMEIFKSLEDWAEENLLVHLKPVERCWQPQDFL 101



to top

>STAD_GOSHI (Q42770) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 397

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P  + E+ +SL GW   N+L  L PVE  WQP DFL
Sbjct: 65  MPPHKIEIFKSLEGWAENNILTHLKPVEKCWQPADFL 101



to top

>STAD_OLEEU (Q43593) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 390

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = +2

Query: 257 EQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           E+ E+  SLN W  EN+L LL  V+  WQP DFL
Sbjct: 62  EKREIFNSLNNWAQENILVLLKDVDKCWQPSDFL 95



to top

>STAD_BRANA (P29108) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 398

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P ++ E+ +S+  W  +N+L  L  VE SWQP DFL
Sbjct: 67  MPPQKIEIFKSMEDWAEQNLLTQLKDVEKSWQPQDFL 103



to top

>STAD_SOLCO (Q41319) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 393

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P E+ E+  SL+GW   N+L  L PVE  WQ  DFL
Sbjct: 62  MPPEKREIFDSLHGWADNNILVHLKPVEKCWQASDFL 98



to top

>STAD_ELAGV (O24428) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 393

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P ++ E+ +SL  W   N+L  L PVE  WQP DFL
Sbjct: 62  MPPQKIEIFKSLEDWAENNILVHLKPVEKCWQPQDFL 98



to top

>STAD_CARTI (P22243) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 396

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P ++ E+ +S+ GW  +N+L  L PVE  WQ  DFL
Sbjct: 65  MPPQKIEIFKSIEGWAEQNILVHLKPVEKCWQAQDFL 101



to top

>STAD_HELAN (Q96456) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 396

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P ++ E+ +S+ GW   N+L  L PVE  WQ  DFL
Sbjct: 65  MPPQKIEIFKSMEGWAENNILVHLKPVEKCWQAQDFL 101



to top

>STAD_CORSA (P32063) Omega-12 acyl-[acyl-carrier-protein] desaturase,|
           chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP
           desaturase)
          Length = 385

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +2

Query: 257 EQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           E  E+  SL GW  +N+L  L  VE+SWQP D+L
Sbjct: 56  EVDELFNSLEGWARDNILVHLKSVENSWQPQDYL 89



to top

>STADS_BRANA (Q01771) Acyl-[acyl-carrier-protein] desaturase, seed specific,|
           chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP
           desaturase)
          Length = 399

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +2

Query: 248 VPREQAEMVQSLNGWVAENMLPLLSPVESSWQPHDFL 358
           +P ++ E+ +S+     +N+LP L  VE SWQP DFL
Sbjct: 68  MPPQKIEIFKSMEDRAEQNLLPHLKDVEKSWQPQDFL 104



to top

>VIE2_HCMVA (P19893) 45 kDa immediate-early protein 2 (IE2) (UL122 protein)|
          Length = 580

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 26/90 (28%), Positives = 33/90 (36%)
 Frame = -2

Query: 336 EDSTGLSSGSMFSATQPFSDCTISACSRGTGANPTSMXXXXXXXXXXXXXXXXXXXLHPE 157
           EDS+  SS S  SA+   S+     CS G GA+ TS                     H  
Sbjct: 256 EDSSSSSSSSCSSASDSESESEEMKCSSGGGASVTS-SHHGRGGFGGAASSSLLSCGHQS 314

Query: 156 FAGRSIHPRRVALPEPASLLLEKKKQIFAD 67
             G S  PR+      + L  EK + I  D
Sbjct: 315 SGGASTGPRKKKSKRISELDNEKVRNIMKD 344



to top

>GRPE2_PONPY (Q5R435) GrpE protein homolog 2, mitochondrial precursor|
           (Mt-GrpE#2)
          Length = 225

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 172 QTASRVCRTEHPPEARGPPRARVAL 98
           +TA   CR+E PP+  GPP A  AL
Sbjct: 38  RTAGEDCRSEDPPDELGPPLAERAL 62



to top

>GRPE2_HUMAN (Q8TAA5) GrpE protein homolog 2, mitochondrial precursor|
           (Mt-GrpE#2)
          Length = 225

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 172 QTASRVCRTEHPPEARGPPRARVAL 98
           +TA   CR+E PP+  GPP A  AL
Sbjct: 38  RTAGEDCRSEDPPDELGPPLAERAL 62



to top

>PININ_CANFA (P79149) Pinin|
          Length = 773

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = -2

Query: 435 RSAATPSMKADRASSSDAPGGAAEHGRKSCGCHEDSTGLSSGS--MFSATQPFSDCTISA 262
           RS ++ S  +  +S+S + GG++  G  S      S+  +SGS    S++   S     +
Sbjct: 630 RSRSSSSSSSSSSSTSSSSGGSSSSGSSSSRSSSSSSSSTSGSSRRDSSSSTTSSSESRS 689

Query: 261 CSRGTGAN 238
            SRG G N
Sbjct: 690 RSRGRGHN 697



to top

>PHY_ADICA (P42496) Phytochrome 1|
          Length = 1118

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
 Frame = -2

Query: 342 CHEDSTGLSSGSMFSATQPFSDCTISACSRGTGANPTSMXXXXXXXXXXXXXXXXXXXLH 163
           CH+DSTGLS+ S+     P + C   A      A  T+                     H
Sbjct: 467 CHKDSTGLSTDSLAKTGYPEASCLGDAVCGLAAAKITATDFLFWFRSHTAKEVRWGGARH 526

Query: 162 -PEFA--GRSIHPR 130
            PE    GR +HPR
Sbjct: 527 DPEERDDGRRMHPR 540



to top

>PPRB_HUMAN (Q15648) Peroxisome proliferator-activated receptor-binding protein|
            (PBP) (PPAR-binding protein) (Thyroid hormone
            receptor-associated protein complex 220 kDa component)
            (Trap220) (Thyroid receptor-interacting protein 2)
            (TRIP-2) (p53 regulator
          Length = 1581

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = -2

Query: 420  PSMKADRASSSDAPGGAAEHGRKSCGCHEDSTGLSS-GSMFSATQPFSD-CTISACSRGT 247
            PS KA    SS + GG+   G  S    + S+GL S GS+   T P S+ CT S+ S  +
Sbjct: 1217 PSSKAKSPISSGS-GGSHMSGTSSSSGMKSSSGLGSSGSLSQKTPPSSNSCTASSSSFSS 1275

Query: 246  GANPTS 229
              +  S
Sbjct: 1276 SGSSMS 1281



to top

>Y1699_PYRHO (O59362) UPF0095 protein PH1699|
          Length = 447

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -2

Query: 117 PEPASLLLEKKKQIFADVHAAGPVFAID 34
           P+P +LLL++ K I A+VH    + AI+
Sbjct: 368 PDPVALLLDENKNIIAEVHTRDLLNAIE 395



to top

>UPL2_ARATH (Q8H0T4) E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-)|
            (Ubiquitin-protein ligase 2)
          Length = 3658

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 227  IDVGFAPVPREQAEMVQSLNGWVAENMLPL 316
            + +G  PVPRE    V++L   V E +LP+
Sbjct: 1192 LSIGLFPVPREPETFVRNLQSQVLEVILPI 1221


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,843,159
Number of Sequences: 219361
Number of extensions: 618630
Number of successful extensions: 2194
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2191
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top