ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast37a10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 180 bits (91), Expect = 3e-42 Identities = 195/227 (85%), Gaps = 2/227 (0%) Strand = Plus / Minus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| ||||| ||||||||||| ||||||| | | || |||||| Sbjct: 118013 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 117954 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 || ||||||||||||||||||||||||||||| ||| |||||||| || |||||| | Sbjct: 117953 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 117894 Query: 240 gcgtcgctgcccgacctggtcgccgcgctgtcccttccacccgccaagctgccttacctc 299 || |||||||||||||| |||||||| |||||||| || ||||||||||| || | |||| Sbjct: 117893 gcctcgctgcccgaccttgtcgccgccctgtccctcccgcccgccaagctcccattcctc 117834 Query: 300 cgccgcatcatgcggctgctgg-cgacgtccggcgtcttcgccgccg 345 |||||| ||||||||||||||| | || || |||||||||||||||| Sbjct: 117833 cgccgcctcatgcggctgctggtccac-tcgggcgtcttcgccgccg 117788 Score = 143 bits (72), Expect = 6e-31 Identities = 186/224 (83%) Strand = Plus / Minus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| ||| | | ||||||||| ||||||| | | || |||||| Sbjct: 141661 gagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccatg 141602 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 || || |||||||||||||||||||||||||| ||| |||||||| || || ||| | Sbjct: 141601 gcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcacc 141542 Query: 240 gcgtcgctgcccgacctggtcgccgcgctgtcccttccacccgccaagctgccttacctc 299 || |||||||||||||| |||||||| || ||||| || ||||||||||| || | |||| Sbjct: 141541 gcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctcccgttcctc 141482 Query: 300 cgccgcatcatgcggctgctggcgacgtccggcgtcttcgccgc 343 |||||| ||||||||||||||| | || |||||||||||||| Sbjct: 141481 cgccgcctcatgcggctgctggtcaactcgggcgtcttcgccgc 141438 Score = 119 bits (60), Expect = 9e-24 Identities = 156/188 (82%) Strand = Plus / Minus Query: 134 gcaggcggacctttggcgccacagtctctactacatgacctccatggcattccagtgcgc 193 |||||| || || |||||||||| |||| |||| | ||||||||| | ||| |||||| Sbjct: 89391 gcaggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgc 89332 Query: 194 cgtcaagctcggcatcccgaccaccatccacagcctgggtggcgcagcgtcgctgcccga 253 |||| | ||||||||||| ||| |||||||| ||| || ||||| || ||||||||||| Sbjct: 89331 cgtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccga 89272 Query: 254 cctggtcgccgcgctgtcccttccacccgccaagctgccttacctccgccgcatcatgcg 313 ||| ||| ||||||||||||| || | |||||||| || | |||||||||| ||||||| Sbjct: 89271 cctcgtcaccgcgctgtccctccccacggccaagctccccttcctccgccgcctcatgcg 89212 Query: 314 gctgctgg 321 |||||||| Sbjct: 89211 gctgctgg 89204
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 180 bits (91), Expect = 3e-42 Identities = 195/227 (85%), Gaps = 2/227 (0%) Strand = Plus / Minus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| ||||| ||||||||||| ||||||| | | || |||||| Sbjct: 11331655 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 11331596 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 || ||||||||||||||||||||||||||||| ||| |||||||| || |||||| | Sbjct: 11331595 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 11331536 Query: 240 gcgtcgctgcccgacctggtcgccgcgctgtcccttccacccgccaagctgccttacctc 299 || |||||||||||||| |||||||| |||||||| || ||||||||||| || | |||| Sbjct: 11331535 gcctcgctgcccgaccttgtcgccgccctgtccctcccgcccgccaagctcccattcctc 11331476 Query: 300 cgccgcatcatgcggctgctgg-cgacgtccggcgtcttcgccgccg 345 |||||| ||||||||||||||| | || || |||||||||||||||| Sbjct: 11331475 cgccgcctcatgcggctgctggtccac-tcgggcgtcttcgccgccg 11331430 Score = 143 bits (72), Expect = 6e-31 Identities = 186/224 (83%) Strand = Plus / Minus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| ||| | | ||||||||| ||||||| | | || |||||| Sbjct: 11355303 gagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccatg 11355244 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 || || |||||||||||||||||||||||||| ||| |||||||| || || ||| | Sbjct: 11355243 gcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcacc 11355184 Query: 240 gcgtcgctgcccgacctggtcgccgcgctgtcccttccacccgccaagctgccttacctc 299 || |||||||||||||| |||||||| || ||||| || ||||||||||| || | |||| Sbjct: 11355183 gcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctcccgttcctc 11355124 Query: 300 cgccgcatcatgcggctgctggcgacgtccggcgtcttcgccgc 343 |||||| ||||||||||||||| | || |||||||||||||| Sbjct: 11355123 cgccgcctcatgcggctgctggtcaactcgggcgtcttcgccgc 11355080 Score = 119 bits (60), Expect = 9e-24 Identities = 156/188 (82%) Strand = Plus / Minus Query: 134 gcaggcggacctttggcgccacagtctctactacatgacctccatggcattccagtgcgc 193 |||||| || || |||||||||| |||| |||| | ||||||||| | ||| |||||| Sbjct: 11303033 gcaggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgc 11302974 Query: 194 cgtcaagctcggcatcccgaccaccatccacagcctgggtggcgcagcgtcgctgcccga 253 |||| | ||||||||||| ||| |||||||| ||| || ||||| || ||||||||||| Sbjct: 11302973 cgtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccga 11302914 Query: 254 cctggtcgccgcgctgtcccttccacccgccaagctgccttacctccgccgcatcatgcg 313 ||| ||| ||||||||||||| || | |||||||| || | |||||||||| ||||||| Sbjct: 11302913 cctcgtcaccgcgctgtccctccccacggccaagctccccttcctccgccgcctcatgcg 11302854 Query: 314 gctgctgg 321 |||||||| Sbjct: 11302853 gctgctgg 11302846 Score = 105 bits (53), Expect = 1e-19 Identities = 130/153 (84%), Gaps = 2/153 (1%) Strand = Plus / Minus Query: 196 tcaagctcggcatcccgaccaccatccacagcctgggtggcgcagcgtcgctgcccgacc 255 ||||||| |||||||| ||| |||||||| || || ||||| |||||||||||||||| Sbjct: 11439525 tcaagcttggcatccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacc 11439466 Query: 256 tggtcgccgcgctgtcccttccacccgccaagctgccttacctccgccgcatcatgcggc 315 |||| |||| |||||||| || || ||||||| || | |||||||||| ||||||||| Sbjct: 11439465 tggttaccgctctgtccctcccgccgtccaagctaccgttcctccgccgcctcatgcggc 11439406 Query: 316 tgctgg-cgacgtccggcgtcttcgccgccgac 347 |||||| | || ||||||||||||||||||||| Sbjct: 11439405 tgctggtccac-tccggcgtcttcgccgccgac 11439374 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 129 caggggcaggcggacctttggcgccacagtctctactacatgacctccatggcattccag 188 |||| |||||| |||| ||||||||||| ||||||||| | ||||||||||| ||| | Sbjct: 11482291 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11482350 Query: 189 tgcgccgtcaagctcggcatccc 211 ||||||||||||||||||||||| Sbjct: 11482351 tgcgccgtcaagctcggcatccc 11482373 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 135 caggcggacctttggcgccacagtctctactacatgacctccatggcattccagtgcgcc 194 ||||| ||||| ||||||||||| ||||||||| | || ||||||| ||| |||||| Sbjct: 11550536 caggccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgcc 11550477 Query: 195 gtcaagctcggcatcccgaccaccatcca 223 ||| ||||||||||||||||||| ||||| Sbjct: 11550476 gtcgagctcggcatcccgaccacgatcca 11550448 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| || || ||||||||||| ||||||||| | ||||||| | Sbjct: 11494855 gagctgctgcaagcgcaggccgatctgtggcgccacagcctctactacctcacctccacg 11494796 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 | | ||| |||||| ||||||| |||||||| ||| |||||||| |||| || ||||| Sbjct: 11494795 ggactccgctgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgcc 11494736 Query: 240 gcgtc 244 ||||| Sbjct: 11494735 gcgtc 11494731 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 135 caggcggacctttggcgccacagtctctactacatgacctccatggcattccagtgcgcc 194 ||||| ||||| ||||||||||| ||| |||| | || ||||||| ||| |||||| Sbjct: 7138986 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 7138927 Query: 195 gtcaagctcggcatcccgaccaccatccacagcct 229 | ||||||||||||||| ||| |||||||| |||| Sbjct: 7138926 gccaagctcggcatccccaccgccatccaccgcct 7138892 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 329 cggcgtcttcgccgccgacagcgccgccg 357 ||||||||||||||||||| ||| ||||| Sbjct: 7138783 cggcgtcttcgccgccgacggcgtcgccg 7138755 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 tcgccgccgacagcgccgccgccg 360 |||||||||||| ||||||||||| Sbjct: 6453998 tcgccgccgacatcgccgccgccg 6453975
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 180 bits (91), Expect = 3e-42 Identities = 195/227 (85%), Gaps = 2/227 (0%) Strand = Plus / Plus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| ||||| ||||||||||| ||||||| | | || |||||| Sbjct: 92 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 151 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 || ||||||||||||||||||||||||||||| ||| |||||||| || |||||| | Sbjct: 152 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 211 Query: 240 gcgtcgctgcccgacctggtcgccgcgctgtcccttccacccgccaagctgccttacctc 299 || |||||||||||||| |||||||| |||||||| || ||||||||||| || | |||| Sbjct: 212 gcctcgctgcccgaccttgtcgccgccctgtccctcccgcccgccaagctcccattcctc 271 Query: 300 cgccgcatcatgcggctgctgg-cgacgtccggcgtcttcgccgccg 345 |||||| ||||||||||||||| | || || |||||||||||||||| Sbjct: 272 cgccgcctcatgcggctgctggtccac-tcgggcgtcttcgccgccg 317
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 180 bits (91), Expect = 3e-42 Identities = 195/227 (85%), Gaps = 2/227 (0%) Strand = Plus / Minus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| ||||| ||||||||||| ||||||| | | || |||||| Sbjct: 11410844 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 11410785 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 || ||||||||||||||||||||||||||||| ||| |||||||| || |||||| | Sbjct: 11410784 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 11410725 Query: 240 gcgtcgctgcccgacctggtcgccgcgctgtcccttccacccgccaagctgccttacctc 299 || |||||||||||||| |||||||| |||||||| || ||||||||||| || | |||| Sbjct: 11410724 gcctcgctgcccgaccttgtcgccgccctgtccctcccgcccgccaagctcccattcctc 11410665 Query: 300 cgccgcatcatgcggctgctgg-cgacgtccggcgtcttcgccgccg 345 |||||| ||||||||||||||| | || || |||||||||||||||| Sbjct: 11410664 cgccgcctcatgcggctgctggtccac-tcgggcgtcttcgccgccg 11410619 Score = 143 bits (72), Expect = 6e-31 Identities = 186/224 (83%) Strand = Plus / Minus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| ||| | | ||||||||| ||||||| | | || |||||| Sbjct: 11434492 gagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccatg 11434433 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 || || |||||||||||||||||||||||||| ||| |||||||| || || ||| | Sbjct: 11434432 gcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcacc 11434373 Query: 240 gcgtcgctgcccgacctggtcgccgcgctgtcccttccacccgccaagctgccttacctc 299 || |||||||||||||| |||||||| || ||||| || ||||||||||| || | |||| Sbjct: 11434372 gcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctcccgttcctc 11434313 Query: 300 cgccgcatcatgcggctgctggcgacgtccggcgtcttcgccgc 343 |||||| ||||||||||||||| | || |||||||||||||| Sbjct: 11434312 cgccgcctcatgcggctgctggtcaactcgggcgtcttcgccgc 11434269 Score = 119 bits (60), Expect = 9e-24 Identities = 156/188 (82%) Strand = Plus / Minus Query: 134 gcaggcggacctttggcgccacagtctctactacatgacctccatggcattccagtgcgc 193 |||||| || || |||||||||| |||| |||| | ||||||||| | ||| |||||| Sbjct: 11382222 gcaggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgc 11382163 Query: 194 cgtcaagctcggcatcccgaccaccatccacagcctgggtggcgcagcgtcgctgcccga 253 |||| | ||||||||||| ||| |||||||| ||| || ||||| || ||||||||||| Sbjct: 11382162 cgtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccga 11382103 Query: 254 cctggtcgccgcgctgtcccttccacccgccaagctgccttacctccgccgcatcatgcg 313 ||| ||| ||||||||||||| || | |||||||| || | |||||||||| ||||||| Sbjct: 11382102 cctcgtcaccgcgctgtccctccccacggccaagctccccttcctccgccgcctcatgcg 11382043 Query: 314 gctgctgg 321 |||||||| Sbjct: 11382042 gctgctgg 11382035 Score = 105 bits (53), Expect = 1e-19 Identities = 130/153 (84%), Gaps = 2/153 (1%) Strand = Plus / Minus Query: 196 tcaagctcggcatcccgaccaccatccacagcctgggtggcgcagcgtcgctgcccgacc 255 ||||||| |||||||| ||| |||||||| || || ||||| |||||||||||||||| Sbjct: 11518714 tcaagcttggcatccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacc 11518655 Query: 256 tggtcgccgcgctgtcccttccacccgccaagctgccttacctccgccgcatcatgcggc 315 |||| |||| |||||||| || || ||||||| || | |||||||||| ||||||||| Sbjct: 11518654 tggttaccgctctgtccctcccgccgtccaagctaccgttcctccgccgcctcatgcggc 11518595 Query: 316 tgctgg-cgacgtccggcgtcttcgccgccgac 347 |||||| | || ||||||||||||||||||||| Sbjct: 11518594 tgctggtccac-tccggcgtcttcgccgccgac 11518563 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 129 caggggcaggcggacctttggcgccacagtctctactacatgacctccatggcattccag 188 |||| |||||| |||| ||||||||||| ||||||||| | ||||||||||| ||| | Sbjct: 11561480 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11561539 Query: 189 tgcgccgtcaagctcggcatccc 211 ||||||||||||||||||||||| Sbjct: 11561540 tgcgccgtcaagctcggcatccc 11561562 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 135 caggcggacctttggcgccacagtctctactacatgacctccatggcattccagtgcgcc 194 ||||| ||||| ||||||||||| ||||||||| | || ||||||| ||| |||||| Sbjct: 11629725 caggccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgcc 11629666 Query: 195 gtcaagctcggcatcccgaccaccatcca 223 ||| ||||||||||||||||||| ||||| Sbjct: 11629665 gtcgagctcggcatcccgaccacgatcca 11629637 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| || || ||||||||||| ||||||||| | ||||||| | Sbjct: 11574044 gagctgctgcaagcgcaggccgatctgtggcgccacagcctctactacctcacctccacg 11573985 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 | | ||| |||||| ||||||| |||||||| ||| |||||||| |||| || ||||| Sbjct: 11573984 ggactccgctgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgcc 11573925 Query: 240 gcgtc 244 ||||| Sbjct: 11573924 gcgtc 11573920 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 135 caggcggacctttggcgccacagtctctactacatgacctccatggcattccagtgcgcc 194 ||||| ||||| ||||||||||| ||| |||| | || ||||||| ||| |||||| Sbjct: 7204957 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 7204898 Query: 195 gtcaagctcggcatcccgaccaccatccacagcct 229 | ||||||||||||||| ||| |||||||| |||| Sbjct: 7204897 gccaagctcggcatccccaccgccatccaccgcct 7204863 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 329 cggcgtcttcgccgccgacagcgccgccg 357 ||||||||||||||||||| ||| ||||| Sbjct: 7204754 cggcgtcttcgccgccgacggcgtcgccg 7204726 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 tcgccgccgacagcgccgccgccg 360 |||||||||||| ||||||||||| Sbjct: 6520465 tcgccgccgacatcgccgccgccg 6520442
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 121 bits (61), Expect = 2e-24 Identities = 181/221 (81%) Strand = Plus / Plus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||||| |||||| ||||| ||||||||||| ||||||||| |||| |||||| Sbjct: 75 gagctgctgcaggcgcaggccgacctgtggcgccacagcctctactacctgacatccatg 134 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 || || ||||||| || ||||| |||||||||| ||||||||| ||| || || | Sbjct: 135 gcgctcaagtgcgcggtggagctccacatcccgaccgccatccacaacctaggcgggtct 194 Query: 240 gcgtcgctgcccgacctggtcgccgcgctgtcccttccacccgccaagctgccttacctc 299 || ||||||| ||||| || |||||||||||||| ||| | |||||||| || | |||| Sbjct: 195 gccacgctgccggacctcgtggccgcgctgtccctgccagcggccaagctcccgttcctc 254 Query: 300 cgccgcatcatgcggctgctggcgacgtccggcgtcttcgc 340 | ||| | ||||||||||||| ||||| ||||||||||| Sbjct: 255 gggcgcgtgatgcggctgctggtcacgtcgggcgtcttcgc 295
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 105 bits (53), Expect = 1e-19 Identities = 130/153 (84%), Gaps = 2/153 (1%) Strand = Plus / Plus Query: 196 tcaagctcggcatcccgaccaccatccacagcctgggtggcgcagcgtcgctgcccgacc 255 ||||||| |||||||| ||| |||||||| || || ||||| |||||||||||||||| Sbjct: 60012 tcaagcttggcatccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacc 60071 Query: 256 tggtcgccgcgctgtcccttccacccgccaagctgccttacctccgccgcatcatgcggc 315 |||| |||| |||||||| || || ||||||| || | |||||||||| ||||||||| Sbjct: 60072 tggttaccgctctgtccctcccgccgtccaagctaccgttcctccgccgcctcatgcggc 60131 Query: 316 tgctgg-cgacgtccggcgtcttcgccgccgac 347 |||||| | || ||||||||||||||||||||| Sbjct: 60132 tgctggtccac-tccggcgtcttcgccgccgac 60163 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 129 caggggcaggcggacctttggcgccacagtctctactacatgacctccatggcattccag 188 |||| |||||| |||| ||||||||||| ||||||||| | ||||||||||| ||| | Sbjct: 17246 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 17187 Query: 189 tgcgccgtcaagctcggcatccc 211 ||||||||||||||||||||||| Sbjct: 17186 tgcgccgtcaagctcggcatccc 17164 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| || || ||||||||||| ||||||||| | ||||||| | Sbjct: 4682 gagctgctgcaagcgcaggccgatctgtggcgccacagcctctactacctcacctccacg 4741 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 | | ||| |||||| ||||||| |||||||| ||| |||||||| |||| || ||||| Sbjct: 4742 ggactccgctgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgcc 4801 Query: 240 gcgtc 244 ||||| Sbjct: 4802 gcgtc 4806
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 129 caggggcaggcggacctttggcgccacagtctctactacatgacctccatggcattccag 188 |||| |||||| |||| ||||||||||| ||||||||| | ||||||||||| ||| | Sbjct: 131497 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 131438 Query: 189 tgcgccgtcaagctcggcatccc 211 ||||||||||||||||||||||| Sbjct: 131437 tgcgccgtcaagctcggcatccc 131415 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| || || ||||||||||| ||||||||| | ||||||| | Sbjct: 118933 gagctgctgcaagcgcaggccgatctgtggcgccacagcctctactacctcacctccacg 118992 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 | | ||| |||||| ||||||| |||||||| ||| |||||||| |||| || ||||| Sbjct: 118993 ggactccgctgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgcc 119052 Query: 240 gcgtc 244 ||||| Sbjct: 119053 gcgtc 119057 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 135 caggcggacctttggcgccacagtctctactacatgacctccatggcattccagtgcgcc 194 ||||| ||||| ||||||||||| ||||||||| | || ||||||| ||| |||||| Sbjct: 63252 caggccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcgcc 63311 Query: 195 gtcaagctcggcatcccgaccaccatcca 223 ||| ||||||||||||||||||| ||||| Sbjct: 63312 gtcgagctcggcatcccgaccacgatcca 63340
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 129 caggggcaggcggacctttggcgccacagtctctactacatgacctccatggcattccag 188 |||| |||||| |||| ||||||||||| ||||||||| | ||||||||||| ||| | Sbjct: 118 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 177 Query: 189 tgcgccgtcaagctcggcatccc 211 ||||||||||||||||||||||| Sbjct: 178 tgcgccgtcaagctcggcatccc 200
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Plus Query: 135 caggcggacctttggcgccacagtctctactacatgacctccatggcattccagtgcgcc 194 ||||| ||||| |||||||||| || |||||| | || ||||||| ||| |||||| Sbjct: 90 caggccgacctgtggcgccacaccctttactacctcacgtccatggggctccgctgcgcc 149 Query: 195 gtcaagctcggcatcccgaccaccatccacagcctgggtggcgcagcgtcgctgcccgac 254 |||||||||||||||||||| | ||||||| ||| ||||||| | |||||||||||| Sbjct: 150 gtcaagctcggcatcccgacggcgatccacaacctcggtggcgtctcctcgctgcccgac 209 Query: 255 ctggtcgccgcgctgtcc 272 |||| || ||||||||| Sbjct: 210 ctggcagctgcgctgtcc 227
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| || || ||||||||||| ||||||||| | ||||||| | Sbjct: 93 gagctgctgcaagcgcaggccgatctgtggcgccacagcctctactacctcacctccacg 152 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 | | ||| |||||| ||||||| |||||||| ||| |||||||| |||| || ||||| Sbjct: 153 ggactccgctgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgcc 212 Query: 240 gcgtc 244 ||||| Sbjct: 213 gcgtc 217
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 120 gagcttctgcaggggcaggcggacctttggcgccacagtctctactacatgacctccatg 179 ||||| ||||| | |||||| || || ||||||||||| ||||||||| | ||||||| | Sbjct: 98 gagctgctgcaagcgcaggccgatctgtggcgccacagcctctactacctcacctccacg 157 Query: 180 gcattccagtgcgccgtcaagctcggcatcccgaccaccatccacagcctgggtggcgca 239 | | ||| |||||| ||||||| |||||||| ||| |||||||| |||| || ||||| Sbjct: 158 ggactccgctgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgcc 217 Query: 240 gcgtc 244 ||||| Sbjct: 218 gcgtc 222
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 135 caggcggacctttggcgccacagtctctactacatgacctccatggcattccagtgcgcc 194 ||||| ||||| ||||||||||| ||| |||| | || ||||||| ||| |||||| Sbjct: 43569 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 43628 Query: 195 gtcaagctcggcatcccgaccaccatccacagcct 229 | ||||||||||||||| ||| |||||||| |||| Sbjct: 43629 gccaagctcggcatccccaccgccatccaccgcct 43663 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 329 cggcgtcttcgccgccgacagcgccgccg 357 ||||||||||||||||||| ||| ||||| Sbjct: 43772 cggcgtcttcgccgccgacggcgtcgccg 43800
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 135 caggcggacctttggcgccacagtctctactacatgacctccatggcattccagtgcgcc 194 ||||| ||||| ||||||||||| ||| |||| | || ||||||| ||| |||||| Sbjct: 52206 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 52147 Query: 195 gtcaagctcggcatcccgaccaccatccacagcct 229 | ||||||||||||||| ||| |||||||| |||| Sbjct: 52146 gccaagctcggcatccccaccgccatccaccgcct 52112 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 329 cggcgtcttcgccgccgacagcgccgccg 357 ||||||||||||||||||| ||| ||||| Sbjct: 52003 cggcgtcttcgccgccgacggcgtcgccg 51975
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 338 cgccgccgacagcgccgccgccg 360 ||||||||||||||||||||||| Sbjct: 2699582 cgccgccgacagcgccgccgccg 2699560
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 338 cgccgccgacagcgccgccgccg 360 ||||||||||||||||||||||| Sbjct: 880005 cgccgccgacagcgccgccgccg 879983
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 338 cgccgccgacagcgccgccgccg 360 ||||||||||||||||||||||| Sbjct: 863018 cgccgccgacagcgccgccgccg 862996
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 338 cgccgccgacagcgccgccgccg 360 ||||||||||||||||||||||| Sbjct: 2129371 cgccgccgacagcgccgccgccg 2129393 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 cgccgccgacagcgccgccgccga 361 |||||||||| ||||||||||||| Sbjct: 2753276 cgccgccgaccgcgccgccgccga 2753299
>ref|XM_450899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1599 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 335 cttcgccgccgacagcgccgccgccg 360 |||||||||||||| ||||||||||| Sbjct: 315 cttcgccgccgacatcgccgccgccg 340
>gb|AE009338.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 108 of 187 of the complete sequence Length = 9212 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 ttcgccgccgacagcgccgccg 357 |||||||||||||||||||||| Sbjct: 2636 ttcgccgccgacagcgccgccg 2615
>gb|AE008277.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 81 of 187 of the complete sequence Length = 10775 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 336 ttcgccgccgacagcgccgccg 357 |||||||||||||||||||||| Sbjct: 6577 ttcgccgccgacagcgccgccg 6598
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 338 cgccgccgacagcgccgccgcc 359 |||||||||||||||||||||| Sbjct: 161907 cgccgccgacagcgccgccgcc 161928
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 341 cgccgacagcgccgccgccgac 362 |||||||||||||||||||||| Sbjct: 101170 cgccgacagcgccgccgccgac 101191
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 335 cttcgccgccgacagcgccgccgccg 360 |||||||||||||| ||||||||||| Sbjct: 13585543 cttcgccgccgacatcgccgccgccg 13585518
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 gccgccgacagcgccgccgccg 360 |||||||||||||||||||||| Sbjct: 8052057 gccgccgacagcgccgccgccg 8052078
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 335 cttcgccgccgacagcgccgccgccg 360 |||||||||||||| ||||||||||| Sbjct: 22959 cttcgccgccgacatcgccgccgccg 22934
>dbj|AP007149.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa018M17 Length = 36758 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 335 cttcgccgccgacagcgccgccgccg 360 |||||||||||||| ||||||||||| Sbjct: 33529 cttcgccgccgacatcgccgccgccg 33504
>dbj|AK105580.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E04, full insert sequence Length = 1605 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 335 cttcgccgccgacagcgccgccgccg 360 |||||||||||||| ||||||||||| Sbjct: 44 cttcgccgccgacatcgccgccgccg 69
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 cgccgacagcgccgccgccgacgtg 365 ||||||||||||||| ||||||||| Sbjct: 4193712 cgccgacagcgccgcggccgacgtg 4193688
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 cgtccggcgtcttcgccgccgacag 349 |||||||||||| |||||||||||| Sbjct: 49785 cgtccggcgtctacgccgccgacag 49761
>gb|AE012316.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 224 of 460 of the complete genome Length = 10615 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 ctgcccgacctggtcgccgcg 266 ||||||||||||||||||||| Sbjct: 692 ctgcccgacctggtcgccgcg 712
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 ctgcccgacctggtcgccgcg 266 ||||||||||||||||||||| Sbjct: 2508924 ctgcccgacctggtcgccgcg 2508904
>ref|NM_001028344.2| Caenorhabditis elegans Y55F3BR.8b (Y55F3BR.8) mRNA, complete cds Length = 1747 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 338 cgccgccgacagcgccgccgccgac 362 ||||||||||| ||||||||||||| Sbjct: 1524 cgccgccgacaacgccgccgccgac 1548
>ref|NM_001028343.1| Caenorhabditis elegans Y55F3BR.8a (Y55F3BR.8) mRNA, complete cds Length = 2010 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 338 cgccgccgacagcgccgccgccgac 362 ||||||||||| ||||||||||||| Sbjct: 1672 cgccgccgacaacgccgccgccgac 1696
>gb|AF491963.1| Edwardsiella tarda citrate lyase ligase gene, partial cds Length = 1000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 cctgggtggcgcagcgtcgct 247 ||||||||||||||||||||| Sbjct: 825 cctgggtggcgcagcgtcgct 805
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 tcgccgccgacagcgccgccgccga 361 ||||||||||| ||||||||||||| Sbjct: 1670456 tcgccgccgaccgcgccgccgccga 1670480 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 tcgccgccgacagcgccgcc 356 |||||||||||||||||||| Sbjct: 5800462 tcgccgccgacagcgccgcc 5800481
>gb|AC024830.2| Caenorhabditis elegans cosmid Y55F3BR, complete sequence Length = 55299 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 338 cgccgccgacagcgccgccgccgac 362 ||||||||||| ||||||||||||| Sbjct: 22969 cgccgccgacaacgccgccgccgac 22945
>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence Length = 106873 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 cgtccggcgtcttcgccgccgacag 349 |||||||||||| |||||||||||| Sbjct: 40756 cgtccggcgtctacgccgccgacag 40732
>emb|AJ871581.1| Streptomyces achromogenes subsp. rubradiris complete rubradirin gene cluster, strain NRRL 3061 Length = 105657 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 cgctgcccgacctggtcgccgcgct 268 ||||||||||||||| ||||||||| Sbjct: 64114 cgctgcccgacctggccgccgcgct 64090
>gb|AF390867.2| Paracoccus versutus plasmid pTAV3 plasmid partitioning protein (parB), plasmid partitioning ATPase (parA), and replication protein (rep) genes, complete cds; and transcription activator (acoR) gene, partial cds Length = 7079 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 tcgccgccgacagcgccgcc 356 |||||||||||||||||||| Sbjct: 2154 tcgccgccgacagcgccgcc 2135
>ref|XM_470102.1| Oryza sativa (japonica cultivar-group), mRNA Length = 807 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 331 gcgtcttcgccgccgacagcgccgccgc 358 ||||||||||| | |||||||||||||| Sbjct: 88 gcgtcttcgccacggacagcgccgccgc 61
>ref|XM_470010.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1794 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ccgccgacagcgccgccgcc 359 |||||||||||||||||||| Sbjct: 349 ccgccgacagcgccgccgcc 330
>ref|XM_469518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4752 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 cgacagcgccgccgccgacg 363 |||||||||||||||||||| Sbjct: 357 cgacagcgccgccgccgacg 338
>ref|XM_478005.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1026 Score = 40.1 bits (20), Expect = 6.5 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 251 cgacctggtcgccgcgctgtcccttccacccg-ccaagctgccttacctccgccgcatca 309 ||||||| |||||||||||||| |||||||| ||||||| || | ||| |||||| ||| Sbjct: 144 cgacctgcacgccgcgctgtccc-tccacccgaccaagctccccttcctgcgccgcgtca 202 Query: 310 tgcg 313 |||| Sbjct: 203 tgcg 206
>gb|AC133005.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C16, complete sequence Length = 137872 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 tcgccgccgacagcgccgccgccg 360 |||||||||||| ||||||||||| Sbjct: 125392 tcgccgccgacatcgccgccgccg 125369
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 cgccgacagcgccgccgccg 360 |||||||||||||||||||| Sbjct: 1226108 cgccgacagcgccgccgccg 1226089
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 331 gcgtcttcgccgccgacagcgccgccgc 358 ||||||||||| | |||||||||||||| Sbjct: 33942109 gcgtcttcgccacggacagcgccgccgc 33942136 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccgccgacagcgccgccgcc 359 |||||||||||||||||||| Sbjct: 33326013 ccgccgacagcgccgccgcc 33326032 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cgacagcgccgccgccgacg 363 |||||||||||||||||||| Sbjct: 32287318 cgacagcgccgccgccgacg 32287337 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cgacagcgccgccgccgacg 363 |||||||||||||||||||| Sbjct: 28466916 cgacagcgccgccgccgacg 28466935
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccgccgacagcgccgccgcc 359 |||||||||||||||||||| Sbjct: 82529 ccgccgacagcgccgccgcc 82548
>ref|XM_850316.1| PREDICTED: Canis familiaris similar to signal-induced proliferation-associated 1 like 3 (LOC612583), mRNA Length = 5313 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgccgccgacagcgccgccg 357 |||||||||||||||||||| Sbjct: 891 cgccgccgacagcgccgccg 872
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cgacagcgccgccgccgacg 363 |||||||||||||||||||| Sbjct: 21085 cgacagcgccgccgccgacg 21104
>emb|AJ862840.1| Streptomyces griseus subsp. griseus streptomycin gene cluster, strain DSM 40236 Length = 90600 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 331 gcgtcttcgccgccgacagcgccgccgc 358 |||||||| |||||||||||||||||| Sbjct: 51433 gcgtcttccacgccgacagcgccgccgc 51406
>gb|AY630576.1| Glossomastix chrysoplasta clone GcDES6f2 fatty acid desaturase (D6) mRNA, complete cds Length = 1821 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 cttcgccgccgacagcgccg 354 |||||||||||||||||||| Sbjct: 138 cttcgccgccgacagcgccg 119
>gb|AY630575.1| Glossomastix chrysoplasta clone GcDES6f1 fatty acid desaturase (D6) mRNA, complete cds Length = 1821 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 cttcgccgccgacagcgccg 354 |||||||||||||||||||| Sbjct: 138 cttcgccgccgacagcgccg 119
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 gctgcccgacctggtcgccg 264 |||||||||||||||||||| Sbjct: 344638 gctgcccgacctggtcgccg 344657
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 gctgcccgacctggtcgccg 264 |||||||||||||||||||| Sbjct: 289884 gctgcccgacctggtcgccg 289903
>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04, complete sequence Length = 173903 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 gccgccgccgacgtggtcgc 370 |||||||||||||||||||| Sbjct: 172152 gccgccgccgacgtggtcgc 172133
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 gccgccgccgacgtggtcgc 370 |||||||||||||||||||| Sbjct: 56694 gccgccgccgacgtggtcgc 56675
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 cgccgccgacagcgccgccgccga 361 |||||||||| ||||||||||||| Sbjct: 5149286 cgccgccgacggcgccgccgccga 5149263
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic sequence, complete sequence Length = 147289 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 tcgccgccgacagcgccgccgccg 360 |||||||||||| ||||||||||| Sbjct: 90232 tcgccgccgacatcgccgccgccg 90255
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 gccgccgccgacgtggtcgc 370 |||||||||||||||||||| Sbjct: 6893823 gccgccgccgacgtggtcgc 6893804
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 cgccgccgccgacgtggtcg 369 |||||||||||||||||||| Sbjct: 26564099 cgccgccgccgacgtggtcg 26564080 Score = 40.1 bits (20), Expect = 6.5 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 251 cgacctggtcgccgcgctgtcccttccacccg-ccaagctgccttacctccgccgcatca 309 ||||||| |||||||||||||| |||||||| ||||||| || | ||| |||||| ||| Sbjct: 16295757 cgacctgcacgccgcgctgtccc-tccacccgaccaagctccccttcctgcgccgcgtca 16295699 Query: 310 tgcg 313 |||| Sbjct: 16295698 tgcg 16295695 Score = 40.1 bits (20), Expect = 6.5 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 251 cgacctggtcgccgcgctgtcccttccacccg-ccaagctgccttacctccgccgcatca 309 ||||||| |||||||||||||| |||||||| ||||||| || | ||| |||||| ||| Sbjct: 16219606 cgacctgcacgccgcgctgtccc-tccacccgaccaagctccccttcctgcgccgcgtca 16219664 Query: 310 tgcg 313 |||| Sbjct: 16219665 tgcg 16219668
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 329 cggcgtcttcgccgccgacagcgccgccgccg 360 |||| ||| ||||||||||| ||||||||||| Sbjct: 6491364 cggcctctccgccgccgacatcgccgccgccg 6491333
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 331 gcgtcttcgccgccgacagcgccgccgc 358 ||||||||||| | |||||||||||||| Sbjct: 34032581 gcgtcttcgccacggacagcgccgccgc 34032608 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccgccgacagcgccgccgcc 359 |||||||||||||||||||| Sbjct: 33416523 ccgccgacagcgccgccgcc 33416542 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cgacagcgccgccgccgacg 363 |||||||||||||||||||| Sbjct: 32377828 cgacagcgccgccgccgacg 32377847 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cgacagcgccgccgccgacg 363 |||||||||||||||||||| Sbjct: 28558240 cgacagcgccgccgccgacg 28558259
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cgacagcgccgccgccgacg 363 |||||||||||||||||||| Sbjct: 61046 cgacagcgccgccgccgacg 61065
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 331 gcgtcttcgccgccgacagcgccgccgc 358 ||||||||||| | |||||||||||||| Sbjct: 115582 gcgtcttcgccacggacagcgccgccgc 115555
>gb|AE004777.1| Pseudomonas aeruginosa PAO1, section 338 of 529 of the complete genome Length = 12444 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 gacagcgccgccgccgacgtggtc 368 |||| ||||||||||||||||||| Sbjct: 1355 gacatcgccgccgccgacgtggtc 1332
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 cgccgccgacagcgccgccgccga 361 |||||||| ||||||||||||||| Sbjct: 4371641 cgccgccgccagcgccgccgccga 4371618
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 cgccgccgccgacgtggtcg 369 |||||||||||||||||||| Sbjct: 109370 cgccgccgccgacgtggtcg 109351
>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0638H11 Length = 162746 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 329 cggcgtcttcgccgccgacagcgccgccgccg 360 |||| ||| ||||||||||| ||||||||||| Sbjct: 158308 cggcctctccgccgccgacatcgccgccgccg 158277
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 329 cggcgtcttcgccgccgacagcgccgccgccg 360 |||| ||| ||||||||||| ||||||||||| Sbjct: 7740 cggcctctccgccgccgacatcgccgccgccg 7709
>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0473C09 Length = 141066 Score = 40.1 bits (20), Expect = 6.5 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 251 cgacctggtcgccgcgctgtcccttccacccg-ccaagctgccttacctccgccgcatca 309 ||||||| |||||||||||||| |||||||| ||||||| || | ||| |||||| ||| Sbjct: 1813 cgacctgcacgccgcgctgtccc-tccacccgaccaagctccccttcctgcgccgcgtca 1755 Query: 310 tgcg 313 |||| Sbjct: 1754 tgcg 1751
>gb|AE005084.1| Halobacterium sp. NRC-1 section 115 of 170 of the complete genome Length = 11691 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 cgccgccgacagcgccgccg 357 |||||||||||||||||||| Sbjct: 1497 cgccgccgacagcgccgccg 1478
>dbj|AK122108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126F17, full insert sequence Length = 4613 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 cgacagcgccgccgccgacg 363 |||||||||||||||||||| Sbjct: 407 cgacagcgccgccgccgacg 388
>ref|XM_319978.2| Anopheles gambiae str. PEST ENSANGP00000016652 (ENSANGG00000014163), partial mRNA Length = 5124 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ggtcgccgcgctgtcccttc 276 |||||||||||||||||||| Sbjct: 3640 ggtcgccgcgctgtcccttc 3621
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_H04 Length = 151699 Score = 40.1 bits (20), Expect = 6.5 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Minus Query: 251 cgacctggtcgccgcgctgtcccttccacccg-ccaagctgccttacctccgccgcatca 309 ||||||| |||||||||||||| |||||||| ||||||| || | ||| |||||| ||| Sbjct: 116195 cgacctgcacgccgcgctgtccc-tccacccgaccaagctccccttcctgcgccgcgtca 116137 Query: 310 tgcg 313 |||| Sbjct: 116136 tgcg 116133 Score = 40.1 bits (20), Expect = 6.5 Identities = 55/64 (85%), Gaps = 2/64 (3%) Strand = Plus / Plus Query: 251 cgacctggtcgccgcgctgtcccttccacccg-ccaagctgccttacctccgccgcatca 309 ||||||| |||||||||||||| |||||||| ||||||| || | ||| |||||| ||| Sbjct: 40044 cgacctgcacgccgcgctgtccc-tccacccgaccaagctccccttcctgcgccgcgtca 40102 Query: 310 tgcg 313 |||| Sbjct: 40103 tgcg 40106
>dbj|AK102189.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086P22, full insert sequence Length = 1698 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ccgccgacagcgccgccgcc 359 |||||||||||||||||||| Sbjct: 209 ccgccgacagcgccgccgcc 190
>dbj|AK071845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118A09, full insert sequence Length = 1698 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 329 cggcgtcttcgccgccgacagcgccgccgccg 360 |||| ||| ||||||||||| ||||||||||| Sbjct: 434 cggcctctccgccgccgacatcgccgccgccg 465
>dbj|AK071708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111M04, full insert sequence Length = 1796 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ccgccgacagcgccgccgcc 359 |||||||||||||||||||| Sbjct: 351 ccgccgacagcgccgccgcc 332
>dbj|AK071618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104J18, full insert sequence Length = 916 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 331 gcgtcttcgccgccgacagcgccgccgc 358 ||||||||||| | |||||||||||||| Sbjct: 219 gcgtcttcgccacggacagcgccgccgc 192
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 gcgccgccgccgacgtggtc 368 |||||||||||||||||||| Sbjct: 670531 gcgccgccgccgacgtggtc 670512
>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete sequence Length = 140069 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 gccgccgccgacgtggtcgc 370 |||||||||||||||||||| Sbjct: 85478 gccgccgccgacgtggtcgc 85459
>gb|AF098965.1|AF098965 Streptomyces arenae strain DSM40737 beta-ketoacyl synthase/acyl transferase (ncnA), chain length factor (ncnB), acyl carrier protein (ncnC), and aromatase (ncnD) genes, complete cds Length = 5500 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 ccgacctggtcgccgcgctg 269 |||||||||||||||||||| Sbjct: 3788 ccgacctggtcgccgcgctg 3807
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 cagcgccgccgccgacgtgg 366 |||||||||||||||||||| Sbjct: 3427613 cagcgccgccgccgacgtgg 3427594 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,169,251 Number of Sequences: 3902068 Number of extensions: 4169251 Number of successful extensions: 82328 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 79268 Number of HSP's gapped (non-prelim): 3048 length of query: 483 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 461 effective length of database: 17,147,199,772 effective search space: 7904859094892 effective search space used: 7904859094892 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
