>ref|XM_463388.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1503

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 279 tggtccaccgggatgacttctccgtgaacgccaccgcggccgagctgcttgcgtaccgg 337
           |||||||||| || |||||| | |||||||||||||||||||||||||| ||| |||||
Sbjct: 233 tggtccaccgcgacgacttcgcggtgaacgccaccgcggccgagctgctcgcgcaccgg 291



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 420 tcgtggcgccggtggtgtctgggttggcccaggggagcg 458
           ||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 395 tcgtggcgccggtggtgtccgggctggcgcaggggagcg 433

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                           
Query: 279      tggtccaccgggatgacttctccgtgaacgccaccgcggccgagctgcttgcgtaccgg 337
                |||||||||| || |||||| | |||||||||||||||||||||||||| ||| |||||
Sbjct: 23511380 tggtccaccgcgacgacttcgcggtgaacgccaccgcggccgagctgctcgcgcaccgg 23511438



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 420      tcgtggcgccggtggtgtctgggttggcccaggggagcg 458
                ||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 23511542 tcgtggcgccggtggtgtccgggctggcgcaggggagcg 23511580

>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025A05
          Length = 154298

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                        
Query: 279   tggtccaccgggatgacttctccgtgaacgccaccgcggccgagctgcttgcgtaccgg 337
             |||||||||| || |||||| | |||||||||||||||||||||||||| ||| |||||
Sbjct: 74685 tggtccaccgcgacgacttcgcggtgaacgccaccgcggccgagctgctcgcgcaccgg 74743



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 420   tcgtggcgccggtggtgtctgggttggcccaggggagcg 458
             ||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 74847 tcgtggcgccggtggtgtccgggctggcgcaggggagcg 74885

>dbj|AK120968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040I01, full
           insert sequence
          Length = 1769

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 279 tggtccaccgggatgacttctccgtgaacgccaccgcggccgagctgcttgcgtaccgg 337
           |||||||||| || |||||| | |||||||||||||||||||||||||| ||| |||||
Sbjct: 262 tggtccaccgcgacgacttcgcggtgaacgccaccgcggccgagctgctcgcgcaccgg 320



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 420 tcgtggcgccggtggtgtctgggttggcccaggggagcg 458
           ||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 424 tcgtggcgccggtggtgtccgggctggcgcaggggagcg 462

>dbj|AK101038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000J20, full
           insert sequence
          Length = 1763

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 279 tggtccaccgggatgacttctccgtgaacgccaccgcggccgagctgcttgcgtaccgg 337
           |||||||||| || |||||| | |||||||||||||||||||||||||| ||| |||||
Sbjct: 267 tggtccaccgcgacgacttcgcggtgaacgccaccgcggccgagctgctcgcgcaccgg 325



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 420 tcgtggcgccggtggtgtctgggttggcccaggggagcg 458
           ||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 429 tcgtggcgccggtggtgtccgggctggcgcaggggagcg 467

>gb|BT016792.1| Zea mays clone Contig625 mRNA sequence
          Length = 1862

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 272 ttccgcttggtccaccgggatgacttctccgtgaacgccaccgcggccgagctgct 327
           |||||| |||||||||||||   |||| | |||||||||||||||| |||||||||
Sbjct: 209 ttccgcgtggtccaccgggacaccttcgcggtgaacgccaccgcgggcgagctgct 264

>gb|AC119884.13| Mus musculus chromosome 15, clone RP24-213O5, complete sequence
          Length = 168400

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 134    cagactcaggccctccttgccaccc 158
              |||||||||||||||||| ||||||
Sbjct: 101097 cagactcaggccctccttcccaccc 101121

>gb|AC113945.26| Mus musculus chromosome 3, clone RP24-96D10, complete sequence
          Length = 144239

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    ccctctccgcgctcctcctcc 95
             |||||||||||||||||||||
Sbjct: 49546 ccctctccgcgctcctcctcc 49566

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 358    ggcggcgcggctctcggccgccgctggc 385
              ||||||||| ||||||||||||||||||
Sbjct: 772449 ggcggcgcg-ctctcggccgccgctggc 772475

>ref|XM_385491.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05315.1)
           partial mRNA
          Length = 1167

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgcgctcctcctcctgcttg 101
           ||||||||||||||||||||
Sbjct: 928 cgcgctcctcctcctgcttg 909

>gb|AC139156.3| Mus musculus BAC clone RP24-115J20 from chromosome 18, complete
             sequence
          Length = 175062

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    ccaccccacctccagttcac 36
             ||||||||||||||||||||
Sbjct: 45206 ccaccccacctccagttcac 45225

>gb|AC117191.4| Mus musculus BAC clone RP23-58O15 from 18, complete sequence
          Length = 149461

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     ccaccccacctccagttcac 36
              ||||||||||||||||||||
Sbjct: 144411 ccaccccacctccagttcac 144430

>emb|AL162412.11| Human DNA sequence from clone RP11-109D9 on chromosome 9 Contains the 5'
              end of the APBA1 gene for myloid beta (A4) precursor
              protein-binding, family A, member 1 (X11), two novel genes,
              the 5' end of a novel gene possible ortholog of mouse RIKEN
              cDNA 1700028P14 gene and two CpG islands, complete sequence
          Length = 189277

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    tcggccgccgctggcccggc 390
              ||||||||||||||||||||
Sbjct: 116868 tcggccgccgctggcccggc 116849

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 198      cccgcgacgacgacgacagc 217
                ||||||||||||||||||||
Sbjct: 17084745 cccgcgacgacgacgacagc 17084764

>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1342C04
          Length = 172097

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   cccgcgacgacgacgacagc 217
             ||||||||||||||||||||
Sbjct: 25502 cccgcgacgacgacgacagc 25521

>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0025H07
          Length = 145605

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   cccgcgacgacgacgacagc 217
             ||||||||||||||||||||
Sbjct: 78404 cccgcgacgacgacgacagc 78423

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 312     ccgcggccgagctgcttgcg 331
               ||||||||||||||||||||
Sbjct: 1281104 ccgcggccgagctgcttgcg 1281085

>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940144D9, complete sequence
          Length = 114276

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 350   gcgaagagggcggcgcggctctcg 373
             |||||||||||| |||||||||||
Sbjct: 98534 gcgaagagggcgtcgcggctctcg 98511


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,716,356
Number of Sequences: 3902068
Number of extensions: 3716356
Number of successful extensions: 93017
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 92636
Number of HSP's gapped (non-prelim): 382
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)