ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast36h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_549829.1| Oryza sativa (japonica cultivar-group), mRNA 172 5e-40
2dbj|AK104280.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 5e-40
3dbj|AK072797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 5e-40
4ref|XM_468251.1| Oryza sativa (japonica cultivar-group), mRNA 159 7e-36
5ref|XM_507026.1| PREDICTED Oryza sativa (japonica cultivar-group... 159 7e-36
6dbj|AK071071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 7e-36
7dbj|AK070650.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 7e-36
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
9dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
11dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
12gb|AY104021.1| Zea mays PCO094851 mRNA sequence 60 5e-06
13gb|BT013169.1| Lycopersicon esculentum clone 134236F, mRNA sequence 50 0.005
14gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequ... 48 0.018
15dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 46 0.071
16gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 44 0.28
17gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.28
18gb|U59450.1|SVU59450 Streptomyces viridochromogenes rRNA (adenin... 44 0.28
19gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.1
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
22gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 42 1.1
23ref|XM_219694.3| PREDICTED: Rattus norvegicus similar to hypothe... 42 1.1
24dbj|AK101118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
25dbj|AK072057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
26dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complet... 42 1.1
27gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.1
28emb|CT009609.1| Desulfococcus multivorans vrl island 42 1.1
29ref|NM_184246.2| Oryza sativa (japonica cultivar-group), mRNA 40 4.4
30ref|NM_185094.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.4
31ref|XM_468576.1| Oryza sativa (japonica cultivar-group), predic... 40 4.4
32ref|XM_478818.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.4
33ref|XM_473798.1| Oryza sativa (japonica cultivar-group), predic... 40 4.4
34gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
35ref|XM_582288.2| PREDICTED: Bos taurus similar to DNA ligase I (... 40 4.4
36gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
37gb|AY550076.1| Sus scrofa spinocerbellar ataxia type 10 protein-... 40 4.4
38gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 4.4
39gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 4.4
40gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 4.4
41gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genom... 40 4.4
42emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.4
43emb|BX640423.1| Bordetella parapertussis strain 12822, complete ... 40 4.4
44emb|BX640422.1| Bordetella pertussis strain Tohama I, complete g... 40 4.4
45emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genom... 40 4.4
46emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 40 4.4
47emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4,... 40 4.4
48emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 4.4
49emb|AJ582817.3| Streptomyces kanamyceticus kanamycin biosyntheti... 40 4.4
50gb|AY423389.1| Canis familiaris BAC 231G24 MHC class I locus, pa... 40 4.4
51dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
52gb|AF338253.1|AF338253 Leptomonas seymouri RNA polymerase II lar... 40 4.4
53dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
54dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
55dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
56dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.4
57gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genom... 40 4.4
58gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.4
59gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
60dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
61dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
62dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 4.4
63dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.4
64dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
65dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
66dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
67dbj|AB094439.1| Lysobacter sp. IB-9374 lepB gene for lysyl endop... 40 4.4
68gb|AE005074.1| Halobacterium sp. NRC-1 section 105 of 170 of the... 40 4.4
69dbj|AB164642.1| Streptomyces kanamyceticus kanamycin biosyntheti... 40 4.4
70dbj|AK121342.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
71emb|AJ223970.1|MDAJ39670 Streptomyces ambofaciens srmA, mgtA genes 40 4.4
72dbj|AK119645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
73dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
74dbj|AK104574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
75dbj|AK102277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
76dbj|AK101133.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
77dbj|AK066546.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
78dbj|AK069001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
79dbj|AK063183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
80dbj|AK061732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
81gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 4.4
82gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 4.4
83emb|AJ628422.2| Streptomyces kanamyceticus partial kanamycin bio... 40 4.4
84gb|U75364.1|RPU75364 Rhodopseudomonas palustris ferredoxin (badB... 40 4.4
85gb|DQ230829.1| Chlamydomonas reinhardtii target of rapamycin kin... 40 4.4
86gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipie... 40 4.4 
>ref|XM_549829.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1593

 Score =  172 bits (87), Expect = 5e-40
 Identities = 195/231 (84%)
 Strand = Plus / Plus

                                                                       
Query: 103 tggtgcctgcaaagtgccccttcggctacgactccaacaccttcaagctcgggcccctca 162
           |||||||  ||||||||||||| ||||| |||||||||||||||||||| || || ||||
Sbjct: 294 tggtgccaccaaagtgcccctttggctatgactccaacaccttcaagcttggcccactca 353

                                                                       
Query: 163 gctgcatggtctgccaggccctgctccacgacgccagcaaatgcaagccgtgcgcgcata 222
           |||||||||||||||| || ||||| ||  |   |||||||||||  |||||| | || |
Sbjct: 354 gctgcatggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcccaca 413

                                                                       
Query: 223 agttctgcaaggcgtgcatatcgcgctttaaggactgcccgttgtgtggtgctgacatag 282
           ||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||||  
Sbjct: 414 agttctgcaaggcatgcatattgcgctttaaggactgtccattgtgtggtgctgacatcc 473

                                                              
Query: 283 aggggttcgagccggatgccgagctccaggccctcgtcgatcgcttcattg 333
           | ||| ||||||| ||||  ||||| || | ||| ||||| ||||||||||
Sbjct: 474 aagggatcgagcccgatgatgagcttcaaggccttgtcgaccgcttcattg 524
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>dbj|AK104280.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-B04, full
           insert sequence
          Length = 1593

 Score =  172 bits (87), Expect = 5e-40
 Identities = 195/231 (84%)
 Strand = Plus / Plus

                                                                       
Query: 103 tggtgcctgcaaagtgccccttcggctacgactccaacaccttcaagctcgggcccctca 162
           |||||||  ||||||||||||| ||||| |||||||||||||||||||| || || ||||
Sbjct: 294 tggtgccaccaaagtgcccctttggctatgactccaacaccttcaagcttggcccactca 353

                                                                       
Query: 163 gctgcatggtctgccaggccctgctccacgacgccagcaaatgcaagccgtgcgcgcata 222
           |||||||||||||||| || ||||| ||  |   |||||||||||  |||||| | || |
Sbjct: 354 gctgcatggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcccaca 413

                                                                       
Query: 223 agttctgcaaggcgtgcatatcgcgctttaaggactgcccgttgtgtggtgctgacatag 282
           ||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||||  
Sbjct: 414 agttctgcaaggcatgcatattgcgctttaaggactgtccattgtgtggtgctgacatcc 473

                                                              
Query: 283 aggggttcgagccggatgccgagctccaggccctcgtcgatcgcttcattg 333
           | ||| ||||||| ||||  ||||| || | ||| ||||| ||||||||||
Sbjct: 474 aagggatcgagcccgatgatgagcttcaaggccttgtcgaccgcttcattg 524
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>dbj|AK072797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139M11, full
           insert sequence
          Length = 1644

 Score =  172 bits (87), Expect = 5e-40
 Identities = 195/231 (84%)
 Strand = Plus / Plus

                                                                       
Query: 103 tggtgcctgcaaagtgccccttcggctacgactccaacaccttcaagctcgggcccctca 162
           |||||||  ||||||||||||| ||||| |||||||||||||||||||| || || ||||
Sbjct: 318 tggtgccaccaaagtgcccctttggctatgactccaacaccttcaagcttggcccactca 377

                                                                       
Query: 163 gctgcatggtctgccaggccctgctccacgacgccagcaaatgcaagccgtgcgcgcata 222
           |||||||||||||||| || ||||| ||  |   |||||||||||  |||||| | || |
Sbjct: 378 gctgcatggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcccaca 437

                                                                       
Query: 223 agttctgcaaggcgtgcatatcgcgctttaaggactgcccgttgtgtggtgctgacatag 282
           ||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||||  
Sbjct: 438 agttctgcaaggcatgcatattgcgctttaaggactgtccattgtgtggtgctgacatcc 497

                                                              
Query: 283 aggggttcgagccggatgccgagctccaggccctcgtcgatcgcttcattg 333
           | ||| ||||||| ||||  ||||| || | ||| ||||| ||||||||||
Sbjct: 498 aagggatcgagcccgatgatgagcttcaaggccttgtcgaccgcttcattg 548
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>ref|XM_468251.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1607

 Score =  159 bits (80), Expect = 7e-36
 Identities = 196/234 (83%), Gaps = 3/234 (1%)
 Strand = Plus / Plus

                                                                       
Query: 103 tggtgcctgcaaagtgccccttcggctacgactccaaca---ccttcaagctcgggcccc 159
           ||||||| |||||||||||||| ||||| ||||||||||   |||||||||| || || |
Sbjct: 291 tggtgccagcaaagtgcccctttggctatgactccaacaacaccttcaagcttggcccac 350

                                                                       
Query: 160 tcagctgcatggtctgccaggccctgctccacgacgccagcaaatgcaagccgtgcgcgc 219
           |||||||| |||||||||| || ||||| ||  |   |||||||||||  |||||| |||
Sbjct: 351 tcagctgcgtggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcgc 410

                                                                       
Query: 220 ataagttctgcaaggcgtgcatatcgcgctttaaggactgcccgttgtgtggtgctgaca 279
           | |||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 411 acaagttctgcaaggcatgcatattgcgctttaaggactgtccattgtgtggtgctgaca 470

                                                                 
Query: 280 tagaggggttcgagccggatgccgagctccaggccctcgtcgatcgcttcattg 333
           |  | ||| ||||||| ||||  ||||| || | ||| ||||| ||||||||||
Sbjct: 471 tccaagggatcgagcctgatgatgagcttcaaggccttgtcgaccgcttcattg 524
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>ref|XM_507026.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1695_H09.11
           mRNA
          Length = 1966

 Score =  159 bits (80), Expect = 7e-36
 Identities = 196/234 (83%), Gaps = 3/234 (1%)
 Strand = Plus / Plus

                                                                       
Query: 103 tggtgcctgcaaagtgccccttcggctacgactccaaca---ccttcaagctcgggcccc 159
           ||||||| |||||||||||||| ||||| ||||||||||   |||||||||| || || |
Sbjct: 585 tggtgccagcaaagtgcccctttggctatgactccaacaacaccttcaagcttggcccac 644

                                                                       
Query: 160 tcagctgcatggtctgccaggccctgctccacgacgccagcaaatgcaagccgtgcgcgc 219
           |||||||| |||||||||| || ||||| ||  |   |||||||||||  |||||| |||
Sbjct: 645 tcagctgcgtggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcgc 704

                                                                       
Query: 220 ataagttctgcaaggcgtgcatatcgcgctttaaggactgcccgttgtgtggtgctgaca 279
           | |||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 705 acaagttctgcaaggcatgcatattgcgctttaaggactgtccattgtgtggtgctgaca 764

                                                                 
Query: 280 tagaggggttcgagccggatgccgagctccaggccctcgtcgatcgcttcattg 333
           |  | ||| ||||||| ||||  ||||| || | ||| ||||| ||||||||||
Sbjct: 765 tccaagggatcgagcctgatgatgagcttcaaggccttgtcgaccgcttcattg 818
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>dbj|AK071071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078L19, full
           insert sequence
          Length = 1966

 Score =  159 bits (80), Expect = 7e-36
 Identities = 196/234 (83%), Gaps = 3/234 (1%)
 Strand = Plus / Plus

                                                                       
Query: 103 tggtgcctgcaaagtgccccttcggctacgactccaaca---ccttcaagctcgggcccc 159
           ||||||| |||||||||||||| ||||| ||||||||||   |||||||||| || || |
Sbjct: 585 tggtgccagcaaagtgcccctttggctatgactccaacaacaccttcaagcttggcccac 644

                                                                       
Query: 160 tcagctgcatggtctgccaggccctgctccacgacgccagcaaatgcaagccgtgcgcgc 219
           |||||||| |||||||||| || ||||| ||  |   |||||||||||  |||||| |||
Sbjct: 645 tcagctgcgtggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcgc 704

                                                                       
Query: 220 ataagttctgcaaggcgtgcatatcgcgctttaaggactgcccgttgtgtggtgctgaca 279
           | |||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 705 acaagttctgcaaggcatgcatattgcgctttaaggactgtccattgtgtggtgctgaca 764

                                                                 
Query: 280 tagaggggttcgagccggatgccgagctccaggccctcgtcgatcgcttcattg 333
           |  | ||| ||||||| ||||  ||||| || | ||| ||||| ||||||||||
Sbjct: 765 tccaagggatcgagcctgatgatgagcttcaaggccttgtcgaccgcttcattg 818
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>dbj|AK070650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061K06, full
           insert sequence
          Length = 1607

 Score =  159 bits (80), Expect = 7e-36
 Identities = 196/234 (83%), Gaps = 3/234 (1%)
 Strand = Plus / Plus

                                                                       
Query: 103 tggtgcctgcaaagtgccccttcggctacgactccaaca---ccttcaagctcgggcccc 159
           ||||||| |||||||||||||| ||||| ||||||||||   |||||||||| || || |
Sbjct: 291 tggtgccagcaaagtgcccctttggctatgactccaacaacaccttcaagcttggcccac 350

                                                                       
Query: 160 tcagctgcatggtctgccaggccctgctccacgacgccagcaaatgcaagccgtgcgcgc 219
           |||||||| |||||||||| || ||||| ||  |   |||||||||||  |||||| |||
Sbjct: 351 tcagctgcgtggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcgc 410

                                                                       
Query: 220 ataagttctgcaaggcgtgcatatcgcgctttaaggactgcccgttgtgtggtgctgaca 279
           | |||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 411 acaagttctgcaaggcatgcatattgcgctttaaggactgtccattgtgtggtgctgaca 470

                                                                 
Query: 280 tagaggggttcgagccggatgccgagctccaggccctcgtcgatcgcttcattg 333
           |  | ||| ||||||| ||||  ||||| || | ||| ||||| ||||||||||
Sbjct: 471 tccaagggatcgagcctgatgatgagcttcaaggccttgtcgaccgcttcattg 524
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score =  101 bits (51), Expect = 1e-18
 Identities = 111/131 (84%)
 Strand = Plus / Plus

                                                                          
Query: 103    tggtgcctgcaaagtgccccttcggctacgactccaacaccttcaagctcgggcccctca 162
              |||||||  ||||||||||||| ||||| |||||||||||||||||||| || || ||||
Sbjct: 209434 tggtgccaccaaagtgcccctttggctatgactccaacaccttcaagcttggcccactca 209493

                                                                          
Query: 163    gctgcatggtctgccaggccctgctccacgacgccagcaaatgcaagccgtgcgcgcata 222
              |||||||||||||||| || ||||| ||  |   |||||||||||  |||||| | || |
Sbjct: 209494 gctgcatggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcccaca 209553

                         
Query: 223    agttctgcaag 233
              |||||||||||
Sbjct: 209554 agttctgcaag 209564



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                          
Query: 237    tgcatatcgcgctttaaggactgcccgttgtgtggtgctgacatagaggggttcgagccg 296
              ||||||| ||||||||||||||| || |||||||||||||||||  | ||| ||||||| 
Sbjct: 209663 tgcatattgcgctttaaggactgtccattgtgtggtgctgacatccaagggatcgagccc 209722

                                                   
Query: 297    gatgccgagctccaggccctcgtcgatcgcttcattg 333
              ||||  ||||| || | ||| ||||| ||||||||||
Sbjct: 209723 gatgatgagcttcaaggccttgtcgaccgcttcattg 209759



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 56      cgaccgcgccgccgccggagaaga 79
               |||||||||||||| |||||||||
Sbjct: 1745485 cgaccgcgccgccgtcggagaaga 1745508
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>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0436E04
          Length = 144644

 Score =  101 bits (51), Expect = 1e-18
 Identities = 111/131 (84%)
 Strand = Plus / Plus

                                                                         
Query: 103   tggtgcctgcaaagtgccccttcggctacgactccaacaccttcaagctcgggcccctca 162
             |||||||  ||||||||||||| ||||| |||||||||||||||||||| || || ||||
Sbjct: 51104 tggtgccaccaaagtgcccctttggctatgactccaacaccttcaagcttggcccactca 51163

                                                                         
Query: 163   gctgcatggtctgccaggccctgctccacgacgccagcaaatgcaagccgtgcgcgcata 222
             |||||||||||||||| || ||||| ||  |   |||||||||||  |||||| | || |
Sbjct: 51164 gctgcatggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcccaca 51223

                        
Query: 223   agttctgcaag 233
             |||||||||||
Sbjct: 51224 agttctgcaag 51234



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                         
Query: 237   tgcatatcgcgctttaaggactgcccgttgtgtggtgctgacatagaggggttcgagccg 296
             ||||||| ||||||||||||||| || |||||||||||||||||  | ||| ||||||| 
Sbjct: 51333 tgcatattgcgctttaaggactgtccattgtgtggtgctgacatccaagggatcgagccc 51392

                                                  
Query: 297   gatgccgagctccaggccctcgtcgatcgcttcattg 333
             ||||  ||||| || | ||| ||||| ||||||||||
Sbjct: 51393 gatgatgagcttcaaggccttgtcgaccgcttcattg 51429
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 112/134 (83%), Gaps = 3/134 (2%)
 Strand = Plus / Minus

                                                                            
Query: 103      tggtgcctgcaaagtgccccttcggctacgactc---caacaccttcaagctcgggcccc 159
                ||||||| |||||||||||||| ||||| |||||   ||||||||||||||| || || |
Sbjct: 33829325 tggtgccagcaaagtgcccctttggctatgactccaacaacaccttcaagcttggcccac 33829266

                                                                            
Query: 160      tcagctgcatggtctgccaggccctgctccacgacgccagcaaatgcaagccgtgcgcgc 219
                |||||||| |||||||||| || ||||| ||  |   |||||||||||  |||||| |||
Sbjct: 33829265 tcagctgcgtggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcgc 33829206

                              
Query: 220      ataagttctgcaag 233
                | ||||||||||||
Sbjct: 33829205 acaagttctgcaag 33829192



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                            
Query: 237      tgcatatcgcgctttaaggactgcccgttgtgtggtgctgacatagaggggttcgagccg 296
                ||||||| ||||||||||||||| || |||||||||||||||||  | ||| ||||||| 
Sbjct: 33829085 tgcatattgcgctttaaggactgtccattgtgtggtgctgacatccaagggatcgagcct 33829026

                                                     
Query: 297      gatgccgagctccaggccctcgtcgatcgcttcattg 333
                ||||  ||||| || | ||| ||||| ||||||||||
Sbjct: 33829025 gatgatgagcttcaaggccttgtcgaccgcttcattg 33828989



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 62       cgccgccgccggagaagagg 81
                ||||||||||||||||||||
Sbjct: 21496387 cgccgccgccggagaagagg 21496406
to top
>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1695_H09
          Length = 114721

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 112/134 (83%), Gaps = 3/134 (2%)
 Strand = Plus / Minus

                                                                         
Query: 103   tggtgcctgcaaagtgccccttcggctacgactc---caacaccttcaagctcgggcccc 159
             ||||||| |||||||||||||| ||||| |||||   ||||||||||||||| || || |
Sbjct: 45903 tggtgccagcaaagtgcccctttggctatgactccaacaacaccttcaagcttggcccac 45844

                                                                         
Query: 160   tcagctgcatggtctgccaggccctgctccacgacgccagcaaatgcaagccgtgcgcgc 219
             |||||||| |||||||||| || ||||| ||  |   |||||||||||  |||||| |||
Sbjct: 45843 tcagctgcgtggtctgccacgctctgctacatcaaagcagcaaatgcaccccgtgctcgc 45784

                           
Query: 220   ataagttctgcaag 233
             | ||||||||||||
Sbjct: 45783 acaagttctgcaag 45770



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                         
Query: 237   tgcatatcgcgctttaaggactgcccgttgtgtggtgctgacatagaggggttcgagccg 296
             ||||||| ||||||||||||||| || |||||||||||||||||  | ||| ||||||| 
Sbjct: 45663 tgcatattgcgctttaaggactgtccattgtgtggtgctgacatccaagggatcgagcct 45604

                                                  
Query: 297   gatgccgagctccaggccctcgtcgatcgcttcattg 333
             ||||  ||||| || | ||| ||||| ||||||||||
Sbjct: 45603 gatgatgagcttcaaggccttgtcgaccgcttcattg 45567
to top
>gb|AY104021.1| Zea mays PCO094851 mRNA sequence
          Length = 1272

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 225 ttctgcaaggcgtgcatatcgcgctttaaggactgcccgttgtgtggtgctgacatagag 284
           ||||||||||| || ||||| |||||||| ||||||||  | ||||||||||| ||||||
Sbjct: 11  ttctgcaaggcatgtatatcacgctttaaagactgcccactatgtggtgctgatatagag 70

             
Query: 285 gg 286
           ||
Sbjct: 71  gg 72
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>gb|BT013169.1| Lycopersicon esculentum clone 134236F, mRNA sequence
          Length = 1843

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 225 ttctgcaaggcgtgcatatcgcgctttaaggactgcccgttgtgtggtgctga 277
           ||||||||||| ||  | || |||||||||||||| || ||||||||||||||
Sbjct: 725 ttctgcaaggcatgtctctcccgctttaaggactgtccattgtgtggtgctga 777
to top
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence
          Length = 505334

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 50    cggcgccgaccgcgccgccgccgg 73
             ||||||||||||||||||||||||
Sbjct: 46720 cggcgccgaccgcgccgccgccgg 46743
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 47      gaccggcgccgaccgcgccgccg 69
               |||||||||||||||||||||||
Sbjct: 4680856 gaccggcgccgaccgcgccgccg 4680878
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 52      gcgccgaccgcgccgccgccgg 73
               ||||||||||||||||||||||
Sbjct: 3413769 gcgccgaccgcgccgccgccgg 3413790
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 52      gcgccgaccgcgccgccgccgg 73
               ||||||||||||||||||||||
Sbjct: 2688068 gcgccgaccgcgccgccgccgg 2688089
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>gb|U59450.1|SVU59450 Streptomyces viridochromogenes rRNA (adenine-N6-)-methyltransferase
           (ermSV) gene, complete cds
          Length = 1300

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 53  cgccgaccgcgccgccgccgga 74
           ||||||||||||||||||||||
Sbjct: 444 cgccgaccgcgccgccgccgga 465
to top
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003A09, complete sequence
          Length = 167222

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 54    gccgaccgcgccgccgccgga 74
             |||||||||||||||||||||
Sbjct: 84334 gccgaccgcgccgccgccgga 84354
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 54      gccgaccgcgccgccgccgga 74
               |||||||||||||||||||||
Sbjct: 2046911 gccgaccgcgccgccgccgga 2046931



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 53       cgccgaccgcgccgccgccg 72
                ||||||||||||||||||||
Sbjct: 34566847 cgccgaccgcgccgccgccg 34566828



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 59      ccgcgccgccgccggagaag 78
               ||||||||||||||||||||
Sbjct: 1206852 ccgcgccgccgccggagaag 1206871
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 54      gccgaccgcgccgccgccgga 74
               |||||||||||||||||||||
Sbjct: 2046923 gccgaccgcgccgccgccgga 2046943



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 53       cgccgaccgcgccgccgccg 72
                ||||||||||||||||||||
Sbjct: 34656919 cgccgaccgcgccgccgccg 34656900



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 59      ccgcgccgccgccggagaag 78
               ||||||||||||||||||||
Sbjct: 1206850 ccgcgccgccgccggagaag 1206869
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 49     ccggcgccgaccgcgccgccg 69
              |||||||||||||||||||||
Sbjct: 453108 ccggcgccgaccgcgccgccg 453128



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     ccggcgccgaccgcgccgcc 68
              ||||||||||||||||||||
Sbjct: 700592 ccggcgccgaccgcgccgcc 700611
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>ref|XM_219694.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
           MGC33486 (predicted) (LOC309158), mRNA
          Length = 1949

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 163 gctgcatggtctgccaggccc 183
           |||||||||||||||||||||
Sbjct: 741 gctgcatggtctgccaggccc 721
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>dbj|AK101118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025H22, full
           insert sequence
          Length = 2691

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 54  gccgaccgcgccgccgccgga 74
           |||||||||||||||||||||
Sbjct: 90  gccgaccgcgccgccgccgga 110
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>dbj|AK072057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108G06,
          full insert sequence
          Length = 2627

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 54 gccgaccgcgccgccgccgga 74
          |||||||||||||||||||||
Sbjct: 37 gccgaccgcgccgccgccgga 57
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>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 301    ccgagctccaggccctcgtcg 321
              |||||||||||||||||||||
Sbjct: 161789 ccgagctccaggccctcgtcg 161769
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 49     ccggcgccgaccgcgccgccgccgg 73
              ||||||||||||||||||| |||||
Sbjct: 938651 ccggcgccgaccgcgccgctgccgg 938675
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>emb|CT009609.1| Desulfococcus multivorans vrl island
          Length = 89210

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 124   tcggctacgactccaacaccttcaagctc 152
             |||||||| ||| ||||||||||||||||
Sbjct: 61827 tcggctactacttcaacaccttcaagctc 61799
to top
>ref|NM_184246.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 56 cgaccgcgccgccgccggagaaga 79
          |||||||||||||| |||||||||
Sbjct: 70 cgaccgcgccgccgtcggagaaga 93
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>ref|NM_185094.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 453

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  cgccgaccgcgccgccgccg 72
           ||||||||||||||||||||
Sbjct: 396 cgccgaccgcgccgccgccg 415
to top
>ref|XM_468576.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 876

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  ccgcgccgccgccggagaag 78
           ||||||||||||||||||||
Sbjct: 296 ccgcgccgccgccggagaag 315
to top
>ref|XM_478818.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3372

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  cgccgaccgcgccgccgccg 72
           ||||||||||||||||||||
Sbjct: 99  cgccgaccgcgccgccgccg 118
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>ref|XM_473798.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ccaggccctgctccacgacg 195
           ||||||||||||||||||||
Sbjct: 796 ccaggccctgctccacgacg 777
to top
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18,
              complete sequence
          Length = 156643

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 54     gccgaccgcgccgccgccggagaagagg 81
              |||||||||| ||||||||||| |||||
Sbjct: 128645 gccgaccgcgtcgccgccggaggagagg 128672
to top
>ref|XM_582288.2| PREDICTED: Bos taurus similar to DNA ligase I
            (Polydeoxyribonucleotide synthase [ATP]), transcript
            variant 1 (LOC505924), mRNA
          Length = 2877

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 297  gatgccgagctccaggccct 316
            ||||||||||||||||||||
Sbjct: 1014 gatgccgagctccaggccct 995
to top
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11,
             complete sequence
          Length = 112796

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 54    gccgaccgcgccgccgccggagaagagg 81
             |||||||||| ||||||||||| |||||
Sbjct: 19566 gccgaccgcgtcgccgccggaggagagg 19593
to top
>gb|AY550076.1| Sus scrofa spinocerbellar ataxia type 10 protein-like protein mRNA,
           partial cds
          Length = 708

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 170 ggtctgccaggccctgctcc 189
           ||||||||||||||||||||
Sbjct: 328 ggtctgccaggccctgctcc 309
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 56      cgaccgcgccgccgccggag 75
               ||||||||||||||||||||
Sbjct: 1571632 cgaccgcgccgccgccggag 1571613
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 53      cgccgaccgcgccgccgccg 72
               ||||||||||||||||||||
Sbjct: 1932021 cgccgaccgcgccgccgccg 1932002
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 288     ttcgagccggatgccgagct 307
               ||||||||||||||||||||
Sbjct: 3037153 ttcgagccggatgccgagct 3037134
to top
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
             sequence
          Length = 164236

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    cgccgaccgcgccgccgccg 72
             ||||||||||||||||||||
Sbjct: 24564 cgccgaccgcgccgccgccg 24545
to top
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    gacaaggagaccggcgccgaccgc 62
             |||||||| |||||||||||||||
Sbjct: 74569 gacaaggacaccggcgccgaccgc 74592
to top
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    gacaaggagaccggcgccgaccgc 62
             |||||||| |||||||||||||||
Sbjct: 74559 gacaaggacaccggcgccgaccgc 74582
to top
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12
          Length = 257701

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    gacaaggagaccggcgccgaccgc 62
             |||||||| |||||||||||||||
Sbjct: 42238 gacaaggacaccggcgccgaccgc 42261
to top
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16
          Length = 349260

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    cgcgccgccgccggagaaga 79
             ||||||||||||||||||||
Sbjct: 38649 cgcgccgccgccggagaaga 38668
to top
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 44     ggagaccggcgccgaccgcgccgccgcc 71
              ||||||||||||||| ||||||| ||||
Sbjct: 315621 ggagaccggcgccgaacgcgccgtcgcc 315594
to top
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
             complete sequence
          Length = 129037

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   ccaggccctgctccacgacg 195
             ||||||||||||||||||||
Sbjct: 63315 ccaggccctgctccacgacg 63334
to top
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 301    ccgagctccaggccctcgtcgatcgctt 328
              |||||| ||||||||||||||| |||||
Sbjct: 187354 ccgagcgccaggccctcgtcgagcgctt 187327
to top
>emb|AJ582817.3| Streptomyces kanamyceticus kanamycin biosynthetic gene cluster, strain
             ATCC12853
          Length = 47050

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    cgccgaccgcgccgccgccg 72
             ||||||||||||||||||||
Sbjct: 34025 cgccgaccgcgccgccgccg 34044
to top
>gb|AY423389.1| Canis familiaris BAC 231G24 MHC class I locus, partial sequence
          Length = 150102

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     gaagagggcgcagaagggga 94
              ||||||||||||||||||||
Sbjct: 108279 gaagagggcgcagaagggga 108298
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 176      ccaggccctgctccacgacg 195
                ||||||||||||||||||||
Sbjct: 30587607 ccaggccctgctccacgacg 30587626
to top
>gb|AF338253.1|AF338253 Leptomonas seymouri RNA polymerase II largest subunit (RNAPII) gene,
            complete cds
          Length = 4993

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 45   gagaccggcgccgaccgcgccgccgccg 72
            ||||||||||||  ||||||||||||||
Sbjct: 4533 gagaccggcgcctgccgcgccgccgccg 4506
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 53       cgccgaccgcgccgccgccg 72
                ||||||||||||||||||||
Sbjct: 23211617 cgccgaccgcgccgccgccg 23211598
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 62       cgccgccgccggagaagagg 81
                ||||||||||||||||||||
Sbjct: 13433861 cgccgccgccggagaagagg 13433842
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 54       gccgaccgcgccgccgccggagaagagg 81
                |||||||||| ||||||||||| |||||
Sbjct: 28700853 gccgaccgcgtcgccgccggaggagagg 28700880
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 92      ggaccctcgcctggtgcctg 111
               ||||||||||||||||||||
Sbjct: 7413179 ggaccctcgcctggtgcctg 7413198
to top
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete
             sequence
          Length = 129302

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    cgccgaccgcgccgccgccg 72
             ||||||||||||||||||||
Sbjct: 76486 cgccgaccgcgccgccgccg 76505
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 49      ccggcgccgaccgcgccgccgccg 72
               |||||||||| |||||||||||||
Sbjct: 3810643 ccggcgccgatcgcgccgccgccg 3810620



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 49      ccggcgccgaccgcgccgccgccg 72
               |||||||||| |||||||||||||
Sbjct: 3325919 ccggcgccgatcgcgccgccgccg 3325896



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 50      cggcgccgaccgcgccgccgccgg 73
               |||||||| |||||||||||||||
Sbjct: 1305537 cggcgccgtccgcgccgccgccgg 1305514
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>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12,
             complete sequence
          Length = 146241

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    ccgcgccgccgccggagaag 78
             ||||||||||||||||||||
Sbjct: 11754 ccgcgccgccgccggagaag 11773
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>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020C11
          Length = 163328

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    cgccgccgccggagaagagg 81
             ||||||||||||||||||||
Sbjct: 91314 cgccgccgccggagaagagg 91333
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>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504H10
          Length = 143515

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 56    cgaccgcgccgccgccggagaaga 79
             |||||||||||||| |||||||||
Sbjct: 87828 cgaccgcgccgccgtcggagaaga 87851
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 39      gacaaggagaccggcgccgaccgcgccg 66
               ||||| ||| ||||||||||||||||||
Sbjct: 5692870 gacaacgaggccggcgccgaccgcgccg 5692897



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 53      cgccgaccgcgccgccgccg 72
               ||||||||||||||||||||
Sbjct: 3600217 cgccgaccgcgccgccgccg 3600198
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 285     gggttcgagccggatgccga 304
               ||||||||||||||||||||
Sbjct: 5494824 gggttcgagccggatgccga 5494843



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 53      cgccgaccgcgccgccgccg 72
               ||||||||||||||||||||
Sbjct: 1670460 cgccgaccgcgccgccgccg 1670479
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>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1294_G12
          Length = 121979

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    cgccgccgccggagaagagg 81
             ||||||||||||||||||||
Sbjct: 95293 cgccgccgccggagaagagg 95274
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>dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0428A03
          Length = 136799

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    cgccgccgccggagaagagg 81
             ||||||||||||||||||||
Sbjct: 45285 cgccgccgccggagaagagg 45266
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>dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1562_B11
          Length = 112144

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    cgccgaccgcgccgccgccg 72
             ||||||||||||||||||||
Sbjct: 74531 cgccgaccgcgccgccgccg 74512
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>dbj|AB094439.1| Lysobacter sp. IB-9374 lepB gene for lysyl endopeptidase precursor,
            complete cds
          Length = 3876

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   cgccgaccgcgccgccgccg 72
            ||||||||||||||||||||
Sbjct: 1240 cgccgaccgcgccgccgccg 1259
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>gb|AE005074.1| Halobacterium sp. NRC-1 section 105 of 170 of the complete genome
          Length = 9729

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 49   ccggcgccgaccgcgccgccgccg 72
            |||| |||||||||||||||||||
Sbjct: 3306 ccggtgccgaccgcgccgccgccg 3283
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>dbj|AB164642.1| Streptomyces kanamyceticus kanamycin biosynthetic gene cluster,
             complete cds
          Length = 25467

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    cgccgaccgcgccgccgccg 72
             ||||||||||||||||||||
Sbjct: 16618 cgccgaccgcgccgccgccg 16637
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>dbj|AK121342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A11, full
           insert sequence
          Length = 6131

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  cgccgccgccggagaagagg 81
           ||||||||||||||||||||
Sbjct: 677 cgccgccgccggagaagagg 696
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>emb|AJ223970.1|MDAJ39670 Streptomyces ambofaciens srmA, mgtA genes
          Length = 2070

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 53 cgccgaccgcgccgccgccg 72
          ||||||||||||||||||||
Sbjct: 68 cgccgaccgcgccgccgccg 87
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>dbj|AK119645.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-G05,
          full insert sequence
          Length = 1850

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 56 cgaccgcgccgccgccggagaaga 79
          |||||||||||||| |||||||||
Sbjct: 68 cgaccgcgccgccgtcggagaaga 91
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>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1699_E05
          Length = 170666

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     cgccgaccgcgccgccgccg 72
              ||||||||||||||||||||
Sbjct: 155801 cgccgaccgcgccgccgccg 155782
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>dbj|AK104574.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H11, full
           insert sequence
          Length = 1338

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ccaggccctgctccacgacg 195
           ||||||||||||||||||||
Sbjct: 796 ccaggccctgctccacgacg 777
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>dbj|AK102277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089D21,
          full insert sequence
          Length = 1772

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 56 cgaccgcgccgccgccggagaaga 79
          |||||||||||||| |||||||||
Sbjct: 70 cgaccgcgccgccgtcggagaaga 93
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>dbj|AK101133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026F23,
          full insert sequence
          Length = 1874

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 56 cgaccgcgccgccgccggagaaga 79
          |||||||||||||| |||||||||
Sbjct: 64 cgaccgcgccgccgtcggagaaga 87
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>dbj|AK066546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070L16, full
           insert sequence
          Length = 1503

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ccaggccctgctccacgacg 195
           ||||||||||||||||||||
Sbjct: 941 ccaggccctgctccacgacg 922
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>dbj|AK069001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003L01, full
           insert sequence
          Length = 1814

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  cgccgccgccggagaagagg 81
           ||||||||||||||||||||
Sbjct: 709 cgccgccgccggagaagagg 728
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>dbj|AK063183.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-B01,
          full insert sequence
          Length = 386

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 56 cgaccgcgccgccgccggagaaga 79
          |||||||||||||| |||||||||
Sbjct: 70 cgaccgcgccgccgtcggagaaga 93
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>dbj|AK061732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C05, full
           insert sequence
          Length = 1338

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ccaggccctgctccacgacg 195
           ||||||||||||||||||||
Sbjct: 796 ccaggccctgctccacgacg 777
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 53      cgccgaccgcgccgccgccg 72
               ||||||||||||||||||||
Sbjct: 2753279 cgccgaccgcgccgccgccg 2753298
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 305     gctccaggccctcgtcgatc 324
               ||||||||||||||||||||
Sbjct: 3334769 gctccaggccctcgtcgatc 3334750
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>emb|AJ628422.2| Streptomyces kanamyceticus partial kanamycin biosynthesis gene cluster,
             strain DSM 40500
          Length = 41576

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    cgccgaccgcgccgccgccg 72
             ||||||||||||||||||||
Sbjct: 30682 cgccgaccgcgccgccgccg 30701
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>gb|U75364.1|RPU75364 Rhodopseudomonas palustris ferredoxin (badB), putative ABC
            transporter subunit (hbaH), putative ABC transporter
            subunit (hbaG), putative ABC transporter subunit (hbaF),
            and putative ABC transporter substrate binding protein
            (hbaE) genes, complete cds; and unknown genes
          Length = 6191

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   cgcgccgccgccggagaaga 79
            ||||||||||||||||||||
Sbjct: 5324 cgcgccgccgccggagaaga 5343
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>gb|DQ230829.1| Chlamydomonas reinhardtii target of rapamycin kinase (TOR) mRNA,
            complete cds
          Length = 7572

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 49   ccggcgccgaccgcgccgccgccg 72
            ||||||||| ||||||||||||||
Sbjct: 2537 ccggcgccgcccgcgccgccgccg 2514
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>gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940126D9, complete sequence
          Length = 125236

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   catggtctgccaggccctgc 186
             ||||||||||||||||||||
Sbjct: 26668 catggtctgccaggccctgc 26687


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,507,269
Number of Sequences: 3902068
Number of extensions: 2507269
Number of successful extensions: 60283
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57169
Number of HSP's gapped (non-prelim): 3097
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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