ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast36g10 |
|---|---|
| Clone Library Name | barley_pub |
>MKL1_HUMAN (Q969V6) MKL/myocardin-like protein 1 (Myocardin-related| transcription factor A) (MRTF-A) (Megakaryoblastic leukemia 1 protein) (Megacaryocytic acute leukemia protein) Length = 931 Score = 32.3 bits (72), Expect = 0.32 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 1/83 (1%) Frame = +2 Query: 14 NKHTDTRAGSS-HPPAPSIMASNTAPAPAADDELLHEFGPLLRVYKSGRLERPLVLPPVA 190 NK+ D+ SS P PS + APAP+A +L H PL S +L Sbjct: 673 NKNADSPGLSSGSPQQPSSQPGSPAPAPSAQMDLEHPLQPLFGTPTS-------LLKKEP 725 Query: 191 PGLDTSTGVQSKDVDLGAYSARL 259 PG + + Q K + G+ S ++ Sbjct: 726 PGYEEAMSQQPKQQENGSSSQQM 748
>MOT3_YEAST (P54785) Transcriptional activator/repressor MOT3 (Modulator of| transcription protein 3) (Hypoxic gene repressor protein 7) Length = 490 Score = 30.8 bits (68), Expect = 0.92 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 4/30 (13%) Frame = +2 Query: 44 SHPPAP----SIMASNTAPAPAADDELLHE 121 +HPPAP + +ASN PAP++D + +H+ Sbjct: 318 NHPPAPVPSSNPVASNLVPAPSSDHKYIHQ 347
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 30.0 bits (66), Expect = 1.6 Identities = 12/42 (28%), Positives = 23/42 (54%) Frame = +2 Query: 8 PANKHTDTRAGSSHPPAPSIMASNTAPAPAADDELLHEFGPL 133 P K G + PAP++++S+++ + + DD L GP+ Sbjct: 937 PRRKRRSLGLGPAPDPAPALVSSSSSSSSSEDDRLRRPLGPM 978
>WNK1_RAT (Q9JIH7) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2126 Score = 29.3 bits (64), Expect = 2.7 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 9/69 (13%) Frame = +2 Query: 47 HPPAPSIMASNTAPAPAADD---------ELLHEFGPLLRVYKSGRLERPLVLPPVAPGL 199 H P + A + AP DD L E + S LE PLV+ V PG+ Sbjct: 1375 HTHCPEMDADTQSKAPGIDDIKTLEEKLRSLFSEHSSSGTQHASVSLETPLVVETVTPGI 1434 Query: 200 DTSTGVQSK 226 T+ SK Sbjct: 1435 PTTAVAPSK 1443
>HAM_DROME (Q8I7Z8) Transcription factor hamlet| Length = 990 Score = 28.5 bits (62), Expect = 4.5 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Frame = +2 Query: 26 DTRAGSSHPPAPSIMASNTA----PAPAADDELLHEFGPLLRVYKSGRLERPLVLPPVAP 193 DT +G P SI +A APA D+ +LH F P L +++ R +PL + Sbjct: 621 DTPSGGDGPLDLSICRKRSAGSFFTAPAEDNLMLHRFMPRLHEFEAER-GQPLKMRKSHS 679 Query: 194 GLDTSTGVQS 223 ++ST +S Sbjct: 680 SAESSTSQKS 689
>ANC1_HUMAN (Q9H1A4) Anaphase-promoting complex subunit 1 (APC1) (Cyclosome| subunit 1) (Protein Tsg24) (Mitotic checkpoint regulator) Length = 1944 Score = 28.5 bits (62), Expect = 4.5 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = +2 Query: 53 PAPSIMASNTAPAPAADDELLHEFGPLLRVYKSGRLERPLVLPPVAPGLDTS 208 PAPS+ SNT P P+ + + PL ++ G L+ ++L PV D+S Sbjct: 515 PAPSLTMSNTMPRPSTPLDGVSTPKPLSKLL--GSLDEVVLLSPVPELRDSS 564
>SMAP1_HUMAN (Q8IYB5) Stromal membrane-associated protein 1| Length = 467 Score = 28.5 bits (62), Expect = 4.5 Identities = 21/67 (31%), Positives = 27/67 (40%) Frame = +2 Query: 38 GSSHPPAPSIMASNTAPAPAADDELLHEFGPLLRVYKSGRLERPLVLPPVAPGLDTSTGV 217 G P + NT P DD L FGP++ + P P AP T + V Sbjct: 220 GLDGPAVAPVTNGNTTVPPLNDD--LDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTV 277 Query: 218 QSKDVDL 238 S D+DL Sbjct: 278 TSGDLDL 284
>L100_ADEG1 (Q64760) Late 100 kDa protein| Length = 984 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +2 Query: 17 KHTDTRAGSSHPPAPS-IMASNTAPAPAADD 106 +H T +S PPAPS I+A T P+P D Sbjct: 950 EHPTTSPSASEPPAPSRILARGTPPSPERRD 980
>HEY1_HUMAN (Q9Y5J3) Hairy/enhancer-of-split related with YRPW motif 1 (Hairy| and enhancer of split related 1) (HESR-1) (Cardiovascular helix-loop-helix factor 2) (HES-related repressor protein 2) (HERP2) Length = 304 Score = 28.5 bits (62), Expect = 4.5 Identities = 19/61 (31%), Positives = 25/61 (40%) Frame = +2 Query: 8 PANKHTDTRAGSSHPPAPSIMASNTAPAPAADDELLHEFGPLLRVYKSGRLERPLVLPPV 187 P H R GS+HP AP++ A + GP+L V S P +L V Sbjct: 210 PTEPHHQGRLGSAHPEAPALRAPPSG-----------SLGPVLPVVTSASKLSPPLLSSV 258 Query: 188 A 190 A Sbjct: 259 A 259
>ZN281_HUMAN (Q9Y2X9) Zinc finger protein 281 (Zinc finger DNA-binding protein| 99) (Transcription factor ZBP-99) (GC-box-binding zinc finger protein 1) Length = 895 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = +2 Query: 35 AGSSHPPAPSIMASNTAPAPAAD 103 AGS+ PP +++S+T+ APAA+ Sbjct: 67 AGSAAPPPQCVLSSSTSAAPAAE 89
>CX56_CHICK (P29415) Gap junction Cx56 protein (Connexin-56)| Length = 510 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +2 Query: 26 DTRAGSSHPPAPSIMASNTAPAPAADD 106 +++ S PPAP ++ + TAPAP D Sbjct: 276 ESKPVSLPPPAPPVVVTTTAPAPVLPD 302
>IRF5_MOUSE (P56477) Interferon regulatory factor 5 (IRF-5)| Length = 497 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 92 PAADDELLHEFGPLLRVYKSGRLERPLVLPPVAPGLDTSTG 214 P D ++ +F L +++S + +P+V P GLD S G Sbjct: 447 PDLKDHMVEQFKELHHLWQSQQQLQPMVQAPPVAGLDASQG 487 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.132 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,297,817 Number of Sequences: 219361 Number of extensions: 326566 Number of successful extensions: 1380 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1286 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1379 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
