| Clone Name | bast36b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 301 bits (152), Expect = 9e-79 Identities = 206/224 (91%) Strand = Plus / Minus Query: 182 tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241 |||||||| ||||||||||||| || ||||||||| |||| | ||||| |||||||| Sbjct: 28731 tggacgaccccggggcacgaggagcagcccaagggctacctattcaaccggccgccgccg 28672 Query: 242 ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301 ||| | || |||||||| |||||||||||||||||| | ||||| ||||||||||| ||| Sbjct: 28671 ccggcgggggagtcgcggaagtgggaggactgggagttgccctgctacgtcacctcgttc 28612 Query: 302 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28611 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 28552 Query: 362 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 405 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28551 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 28508
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 301 bits (152), Expect = 9e-79 Identities = 206/224 (91%) Strand = Plus / Minus Query: 182 tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241 |||||||| ||||||||||||| || ||||||||| |||| | ||||| |||||||| Sbjct: 18630855 tggacgaccccggggcacgaggagcagcccaagggctacctattcaaccggccgccgccg 18630796 Query: 242 ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301 ||| | || |||||||| |||||||||||||||||| | ||||| ||||||||||| ||| Sbjct: 18630795 ccggcgggggagtcgcggaagtgggaggactgggagttgccctgctacgtcacctcgttc 18630736 Query: 302 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18630735 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 18630676 Query: 362 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 405 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18630675 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 18630632
>dbj|AK108131.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-D10, full insert sequence Length = 675 Score = 301 bits (152), Expect = 9e-79 Identities = 206/224 (91%) Strand = Plus / Plus Query: 182 tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241 |||||||| ||||||||||||| || ||||||||| |||| | ||||| |||||||| Sbjct: 201 tggacgaccccggggcacgaggagcagcccaagggctacctattcaaccggccgccgccg 260 Query: 242 ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301 ||| | || |||||||| |||||||||||||||||| | ||||| ||||||||||| ||| Sbjct: 261 ccggcgggggagtcgcggaagtgggaggactgggagttgccctgctacgtcacctcgttc 320 Query: 302 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 380 Query: 362 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 405 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 424
>gb|AY107905.1| Zea mays PCO122820 mRNA sequence Length = 653 Score = 244 bits (123), Expect = 2e-61 Identities = 201/227 (88%) Strand = Plus / Plus Query: 182 tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241 |||||||| || || ||||||| ||| ||||||||||||| | ||||| |||||||| Sbjct: 179 tggacgaccccaggtcacgaggagcgccccaaggggtacctcttcaaccggccgccgccg 238 Query: 242 ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301 || || || || || |||||||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 239 cctccgggggaatctcgcaagtgggaggattgggagctgccctgctacgtgacctccttc 298 Query: 302 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361 |||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||| Sbjct: 299 ctcaccgtcgtcatcctcggcgtcggcctcaacgcgaagcccgaccttacaatcgagacg 358 Query: 362 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 408 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 405
>ref|XM_483234.1| Oryza sativa (japonica cultivar-group), mRNA Length = 330 Score = 230 bits (116), Expect = 3e-57 Identities = 199/227 (87%), Gaps = 6/227 (2%) Strand = Plus / Plus Query: 182 tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241 ||||||||||| |||||||||| ||||||||||||| ||| | ||||| |||| Sbjct: 79 tggacgacgcccgggcacgaggagcggcccaaggggcacctcttcaaccg------gccg 132 Query: 242 ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301 ||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 133 ccgccgggggagtcgcggaagtgggaggactgggagcttccctgctacgtcacctccttc 192 Query: 302 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361 |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 193 ctcaccgtcgccatcctcggcgtcggcctcagcgccaagcccgacctcaccctcgagacg 252 Query: 362 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 408 ||||||||||| ||||| ||||| ||||||||| || |||| ||||| Sbjct: 253 tgggcgcaccacaaggccctcgaccgcctccaggagaaggacctcgc 299
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 230 bits (116), Expect = 3e-57 Identities = 199/227 (87%), Gaps = 6/227 (2%) Strand = Plus / Plus Query: 182 tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241 ||||||||||| |||||||||| ||||||||||||| ||| | ||||| |||| Sbjct: 24969122 tggacgacgcccgggcacgaggagcggcccaaggggcacctcttcaaccg------gccg 24969175 Query: 242 ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301 ||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 24969176 ccgccgggggagtcgcggaagtgggaggactgggagcttccctgctacgtcacctccttc 24969235 Query: 302 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361 |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 24969236 ctcaccgtcgccatcctcggcgtcggcctcagcgccaagcccgacctcaccctcgagacg 24969295 Query: 362 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 408 ||||||||||| ||||| ||||| ||||||||| || |||| ||||| Sbjct: 24969296 tgggcgcaccacaaggccctcgaccgcctccaggagaaggacctcgc 24969342 Score = 46.1 bits (23), Expect = 0.089 Identities = 29/31 (93%) Strand = Plus / Plus Query: 289 cgtcacctccttcctcaccgtcgtcatcctc 319 |||| |||||||||||||| ||||||||||| Sbjct: 19786766 cgtcgcctccttcctcaccatcgtcatcctc 19786796 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cctccttcctcaccgtcgtc 313 |||||||||||||||||||| Sbjct: 20401326 cctccttcctcaccgtcgtc 20401345
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 230 bits (116), Expect = 3e-57 Identities = 199/227 (87%), Gaps = 6/227 (2%) Strand = Plus / Plus Query: 182 tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241 ||||||||||| |||||||||| ||||||||||||| ||| | ||||| |||| Sbjct: 25238 tggacgacgcccgggcacgaggagcggcccaaggggcacctcttcaaccg------gccg 25291 Query: 242 ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301 ||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 25292 ccgccgggggagtcgcggaagtgggaggactgggagcttccctgctacgtcacctccttc 25351 Query: 302 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361 |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 25352 ctcaccgtcgccatcctcggcgtcggcctcagcgccaagcccgacctcaccctcgagacg 25411 Query: 362 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 408 ||||||||||| ||||| ||||| ||||||||| || |||| ||||| Sbjct: 25412 tgggcgcaccacaaggccctcgaccgcctccaggagaaggacctcgc 25458
>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_H03 Length = 135914 Score = 230 bits (116), Expect = 3e-57 Identities = 199/227 (87%), Gaps = 6/227 (2%) Strand = Plus / Plus Query: 182 tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241 ||||||||||| |||||||||| ||||||||||||| ||| | ||||| |||| Sbjct: 70837 tggacgacgcccgggcacgaggagcggcccaaggggcacctcttcaaccg------gccg 70890 Query: 242 ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301 ||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 70891 ccgccgggggagtcgcggaagtgggaggactgggagcttccctgctacgtcacctccttc 70950 Query: 302 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361 |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 70951 ctcaccgtcgccatcctcggcgtcggcctcagcgccaagcccgacctcaccctcgagacg 71010 Query: 362 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 408 ||||||||||| ||||| ||||| ||||||||| || |||| ||||| Sbjct: 71011 tgggcgcaccacaaggccctcgaccgcctccaggagaaggacctcgc 71057
>gb|AC155337.1| Brassica rapa subsp. pekinensis clone KBrH117N09, complete sequence Length = 125390 Score = 151 bits (76), Expect = 2e-33 Identities = 172/204 (84%) Strand = Plus / Plus Query: 188 acgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccgccgccc 247 |||||||| ||||||| |||||||||||| ||| ||||||||||| || |||||||| Sbjct: 83683 acgccgggccacgaggagcggcccaagggctacttcatgaaccgcacccctccgccgccg 83742 Query: 248 ggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcacc 307 || |||||||||| ||||||||||||||||| || || ||| |||| ||||||||| Sbjct: 83743 ggacagtcgcgcaaatgggaggactgggagcttccttgctacatcacgagcttcctcacg 83802 Query: 308 gtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacctgggcg 367 |||||||||||||||||||||||||||| || ||||| ||| | ||||||||||||| Sbjct: 83803 atcgtcatcctcggcgtcgggctcaacgctaaacccgatctctcgatcgagacctgggcc 83862 Query: 368 caccagaaggcgctcgagcgcctc 391 || |||||||| || || |||||| Sbjct: 83863 catcagaaggccctggaacgcctc 83886
>ref|XM_469277.1| Oryza sativa (japonica cultivar-group), mRNA Length = 804 Score = 123 bits (62), Expect = 5e-25 Identities = 104/118 (88%) Strand = Plus / Plus Query: 258 gcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcc 317 ||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||| | Sbjct: 596 gcaagtgggtggactgggagcttccctgctacctcacctccttcctcaccgtcgtcattc 655 Query: 318 tcggcgtcgggctcaacgccaagcccgacctcaccctcgagacctgggcgcaccagaa 375 ||||| || |||||||||| |||||| || ||||||| ||||| || |||||||||| Sbjct: 656 tcggcatcaggctcaacgcgaagcccaacttcaccctgcagacccggccgcaccagaa 713
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 123 bits (62), Expect = 5e-25 Identities = 104/118 (88%) Strand = Plus / Minus Query: 258 gcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcc 317 ||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||| | Sbjct: 26503177 gcaagtgggtggactgggagcttccctgctacctcacctccttcctcaccgtcgtcattc 26503118 Query: 318 tcggcgtcgggctcaacgccaagcccgacctcaccctcgagacctgggcgcaccagaa 375 ||||| || |||||||||| |||||| || ||||||| ||||| || |||||||||| Sbjct: 26503117 tcggcatcaggctcaacgcgaagcccaacttcaccctgcagacccggccgcaccagaa 26503060 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 aatcctccaccacgcacacgc 69 ||||||||||||||||||||| Sbjct: 29830552 aatcctccaccacgcacacgc 29830572
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 123 bits (62), Expect = 5e-25 Identities = 104/118 (88%) Strand = Plus / Minus Query: 258 gcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcc 317 ||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||| | Sbjct: 26594500 gcaagtgggtggactgggagcttccctgctacctcacctccttcctcaccgtcgtcattc 26594441 Query: 318 tcggcgtcgggctcaacgccaagcccgacctcaccctcgagacctgggcgcaccagaa 375 ||||| || |||||||||| |||||| || ||||||| ||||| || |||||||||| Sbjct: 26594440 tcggcatcaggctcaacgcgaagcccaacttcaccctgcagacccggccgcaccagaa 26594383 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 aatcctccaccacgcacacgc 69 ||||||||||||||||||||| Sbjct: 29921974 aatcctccaccacgcacacgc 29921994
>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete sequence Length = 136712 Score = 123 bits (62), Expect = 5e-25 Identities = 104/118 (88%) Strand = Plus / Minus Query: 258 gcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcc 317 ||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||| | Sbjct: 25991 gcaagtgggtggactgggagcttccctgctacctcacctccttcctcaccgtcgtcattc 25932 Query: 318 tcggcgtcgggctcaacgccaagcccgacctcaccctcgagacctgggcgcaccagaa 375 ||||| || |||||||||| |||||| || ||||||| ||||| || |||||||||| Sbjct: 25931 tcggcatcaggctcaacgcgaagcccaacttcaccctgcagacccggccgcaccagaa 25874
>ref|NM_115639.2| Arabidopsis thaliana unknown protein AT3G57785 mRNA, complete cds Length = 644 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Plus Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283 |||||||| || |||||||| || || |||||||||||||||| || |||||||| || Sbjct: 174 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 233 Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343 |||||| |||| ||||||||| | || |||||||| || || ||||| ||||| || Sbjct: 234 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 293 Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391 || || | ||||||||||||| |||||||| || || ||||||||| Sbjct: 294 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 341
>emb|AL049660.1|ATF15B8 Arabidopsis thaliana DNA chromosome 3, BAC clone F15B8 Length = 94378 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Plus Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283 |||||||| || |||||||| || || |||||||||||||||| || |||||||| || Sbjct: 5005 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 5064 Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343 |||||| |||| ||||||||| | || |||||||| || || ||||| ||||| || Sbjct: 5065 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 5124 Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391 || || | ||||||||||||| |||||||| || || ||||||||| Sbjct: 5125 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 5172
>gb|AY136461.1| Arabidopsis thaliana expressed protein (At3g57785) mRNA, complete cds Length = 621 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Plus Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283 |||||||| || |||||||| || || |||||||||||||||| || |||||||| || Sbjct: 154 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 213 Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343 |||||| |||| ||||||||| | || |||||||| || || ||||| ||||| || Sbjct: 214 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 273 Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391 || || | ||||||||||||| |||||||| || || ||||||||| Sbjct: 274 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 321
>emb|BX826260.1|CNS0A6CP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 526 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Plus Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283 |||||||| || |||||||| || || |||||||||||||||| || |||||||| || Sbjct: 72 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 131 Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343 |||||| |||| ||||||||| | || |||||||| || || ||||| ||||| || Sbjct: 132 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 191 Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391 || || | ||||||||||||| |||||||| || || ||||||||| Sbjct: 192 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 239
>emb|BX826095.1|CNS0A6FR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZE05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 603 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Plus Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283 |||||||| || |||||||| || || |||||||||||||||| || |||||||| || Sbjct: 149 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 208 Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343 |||||| |||| ||||||||| | || |||||||| || || ||||| ||||| || Sbjct: 209 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 268 Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391 || || | ||||||||||||| |||||||| || || ||||||||| Sbjct: 269 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 316
>emb|BX825433.1|CNS0A6BX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 612 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Plus Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283 |||||||| || |||||||| || || |||||||||||||||| || |||||||| || Sbjct: 142 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 201 Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343 |||||| |||| ||||||||| | || |||||||| || || ||||| ||||| || Sbjct: 202 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 261 Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391 || || | ||||||||||||| |||||||| || || ||||||||| Sbjct: 262 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 309
>emb|BX842176.1|CNS09YBN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL17ZB01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 632 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Plus Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283 |||||||| || |||||||| || || |||||||||||||||| || |||||||| || Sbjct: 162 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 221 Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343 |||||| |||| ||||||||| | || |||||||| || || ||||| ||||| || Sbjct: 222 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 281 Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391 || || | ||||||||||||| |||||||| || || ||||||||| Sbjct: 282 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 329
>gb|AY086245.1| Arabidopsis thaliana clone 22956 mRNA, complete sequence Length = 642 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Plus Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283 |||||||| || |||||||| || || |||||||||||||||| || |||||||| || Sbjct: 174 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 233 Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343 |||||| |||| ||||||||| | || |||||||| || || ||||| ||||| || Sbjct: 234 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 293 Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391 || || | ||||||||||||| |||||||| || || ||||||||| Sbjct: 294 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 341
>gb|BT001251.1| Arabidopsis thaliana expressed protein (At3g57785) mRNA, complete cds Length = 489 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Plus Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283 |||||||| || |||||||| || || |||||||||||||||| || |||||||| || Sbjct: 136 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 195 Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343 |||||| |||| ||||||||| | || |||||||| || || ||||| ||||| || Sbjct: 196 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 255 Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391 || || | ||||||||||||| |||||||| || || ||||||||| Sbjct: 256 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 303
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 6e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 301 cctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagac 360 ||||||||||||||| |||||| || |||||||| | |||||| |||||||||| |||| Sbjct: 18346190 cctcaccgtcgtcattctcggcatcaggctcaacacaaagcccaacctcaccctgcagac 18346249 Query: 361 ctgggcgcaccagaa 375 |||| ||||| |||| Sbjct: 18346250 ctggccgcactagaa 18346264
>dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1108H10 Length = 136357 Score = 69.9 bits (35), Expect = 6e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 301 cctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagac 360 ||||||||||||||| |||||| || |||||||| | |||||| |||||||||| |||| Sbjct: 103524 cctcaccgtcgtcattctcggcatcaggctcaacacaaagcccaacctcaccctgcagac 103583 Query: 361 ctgggcgcaccagaa 375 |||| ||||| |||| Sbjct: 103584 ctggccgcactagaa 103598
>gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, complete sequence Length = 105308 Score = 67.9 bits (34), Expect = 2e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 263 tgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcctcggc 322 |||||||| ||||| ||||| || ||| ||||| |||| ||||| |||||||||| || Sbjct: 44827 tgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggt 44768 Query: 323 gtcgggctcaacgccaagcccgacctcaccctcgagacctgggcgcacca 372 || || ||||| ||||||||||| |||||||| || || ||||| ||||| Sbjct: 44767 gtgggactcaatgccaagcccgatctcacccttgaaacttgggcccacca 44718
>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181, complete sequence Length = 185320 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 263 tgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcctcggc 322 ||||| || ||||| |||||||| ||| ||||| |||||||||| |||| ||| | ||| Sbjct: 63912 tgggaagattgggaactcccctgctacatcaccagcttcctcaccatcgtgatcttgggc 63971 Query: 323 gtcgggctcaacgccaagcccga 345 || || ||||||||||||||||| Sbjct: 63972 gttggtctcaacgccaagcccga 63994
>dbj|AP004955.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT19K21, TM0132, complete sequence Length = 59303 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 263 tgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcctcggc 322 ||||| || ||||| |||||||| ||| ||||| |||||||||| |||| ||| | ||| Sbjct: 43392 tgggaagattgggaactcccctgctacatcaccagcttcctcaccatcgtgatcttgggc 43451 Query: 323 gtcgggctcaacgccaagcccga 345 || || ||||||||||||||||| Sbjct: 43452 gttggtctcaacgccaagcccga 43474
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17 Length = 109016 Score = 56.0 bits (28), Expect = 9e-05 Identities = 94/116 (81%) Strand = Plus / Minus Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283 |||||||| || |||||||| || || |||||||||||||||| || |||||||| || Sbjct: 123 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 64 Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaa 339 |||||| |||| ||||||||| | || |||||||| || || ||||| ||||| Sbjct: 63 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaa 8
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 289 cgtcacctccttcctcaccgtcgtcatcctc 319 |||| |||||||||||||||||||||||||| Sbjct: 115337 cgtcgcctccttcctcaccgtcgtcatcctc 115307
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 289 cgtcacctccttcctcaccgtcgtcatcctc 319 |||| |||||||||||||||||||||||||| Sbjct: 23429801 cgtcgcctccttcctcaccgtcgtcatcctc 23429771
>ref|XM_474411.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 675 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 294 cctccttcctcaccgtcgtcatcctc 319 |||||||||||||||||||||||||| Sbjct: 605 cctccttcctcaccgtcgtcatcctc 630
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 294 cctccttcctcaccgtcgtcatcctc 319 |||||||||||||||||||||||||| Sbjct: 34986493 cctccttcctcaccgtcgtcatcctc 34986518 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 24969183 ccgcacgccgccgccgcccg 24969202 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 accgcacgccgccgccgccc 247 |||||||||||||||||||| Sbjct: 6660664 accgcacgccgccgccgccc 6660645
>dbj|AK105205.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G03, full insert sequence Length = 592 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 294 cctccttcctcaccgtcgtcatcctc 319 |||||||||||||||||||||||||| Sbjct: 221 cctccttcctcaccgtcgtcatcctc 246
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 294 cctccttcctcaccgtcgtcatcctc 319 |||||||||||||||||||||||||| Sbjct: 16649 cctccttcctcaccgtcgtcatcctc 16674
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 294 cctccttcctcaccgtcgtcatcctc 319 |||||||||||||||||||||||||| Sbjct: 45543 cctccttcctcaccgtcgtcatcctc 45568
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 cgccgccgccgcccggcgagtcg 256 ||||||||||||||||||||||| Sbjct: 8294 cgccgccgccgcccggcgagtcg 8316
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 cgccgccgccgcccggcgagtcg 256 ||||||||||||||||||||||| Sbjct: 155809 cgccgccgccgcccggcgagtcg 155831
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 46.1 bits (23), Expect = 0.089 Identities = 29/31 (93%) Strand = Plus / Plus Query: 289 cgtcacctccttcctcaccgtcgtcatcctc 319 |||| |||||||||||||| ||||||||||| Sbjct: 115717 cgtcgcctccttcctcaccatcgtcatcctc 115747
>ref|NM_204644.1| Gallus gallus multiple inositol polyphosphate histidine phosphatase, 1 (MINPP1), mRNA Length = 1587 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 ccgcacgccgccgccgcccggc 250 |||||||||||||||||||||| Sbjct: 219 ccgcacgccgccgccgcccggc 240
>gb|U59421.1|GGU59421 Gallus gallus histidine phosphatase of the endoplasmic reticulum (HiPER1) mRNA, complete cds Length = 1587 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 ccgcacgccgccgccgcccggc 250 |||||||||||||||||||||| Sbjct: 219 ccgcacgccgccgccgcccggc 240
>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 aatcctccaccacgcacacgc 69 ||||||||||||||||||||| Sbjct: 18909 aatcctccaccacgcacacgc 18889
>gb|BC103725.1| Homo sapiens cDNA clone IMAGE:5784399, with apparent retained intron Length = 1697 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 cgagcgcctccagcagcaggagctc 406 ||||||||||||||||| ||||||| Sbjct: 1551 cgagcgcctccagcagctggagctc 1575
>gb|AY203956.1| Homo sapiens LP8272 mRNA, complete cds Length = 1083 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 cgagcgcctccagcagcaggagctc 406 ||||||||||||||||| ||||||| Sbjct: 933 cgagcgcctccagcagctggagctc 957
>gb|BC001908.1| Homo sapiens chromosome 16 open reading frame 68, mRNA (cDNA clone MGC:2654 IMAGE:3536628), complete cds Length = 1525 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 cgagcgcctccagcagcaggagctc 406 ||||||||||||||||| ||||||| Sbjct: 1375 cgagcgcctccagcagctggagctc 1399
>dbj|AK022495.1| Homo sapiens cDNA FLJ12433 fis, clone NT2RM1000032 Length = 1485 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 cgagcgcctccagcagcaggagctc 406 ||||||||||||||||| ||||||| Sbjct: 1359 cgagcgcctccagcagctggagctc 1383
>gb|AC116441.2| Homo sapiens chromosome 3 clone RP11-20O23, complete sequence Length = 142374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 gactgggagctcccctgttac 289 ||||||||||||||||||||| Sbjct: 76522 gactgggagctcccctgttac 76502
>gb|AC099560.2| Homo sapiens chromosome 3 clone RP11-761N21, complete sequence Length = 192169 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 gactgggagctcccctgttac 289 ||||||||||||||||||||| Sbjct: 174742 gactgggagctcccctgttac 174762
>ref|XM_692023.1| PREDICTED: Danio rerio similar to PAP associated domain containing 5 (Topoisomerase-related function protein 4-2) (TRF4-2) (LOC568678), mRNA Length = 1962 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 ctccttcctcaccgtcgtcatcctc 319 ||||||| ||||||||||||||||| Sbjct: 1616 ctccttcatcaccgtcgtcatcctc 1640
>emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in linkage group 7, complete sequence Length = 170764 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 ctccttcctcaccgtcgtcatcctc 319 ||||||| ||||||||||||||||| Sbjct: 68144 ctccttcatcaccgtcgtcatcctc 68168
>gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, complete sequence Length = 63849 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 acgaggtgcggcccaaggggt 218 ||||||||||||||||||||| Sbjct: 60735 acgaggtgcggcccaaggggt 60715
>gb|AF546148.1|AF546147S2 Streptomyces kaniharaensis PksE (pksE) and TebC (tebC) genes, complete cds Length = 6263 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 gcctccagcagcaggagctcg 407 ||||||||||||||||||||| Sbjct: 1481 gcctccagcagcaggagctcg 1461
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 agcgcctccagcagcaggagc 404 ||||||||||||||||||||| Sbjct: 4474561 agcgcctccagcagcaggagc 4474581
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 cttcctcaccgtcgtcatcctcggcgtcg 326 ||||||| ||||||||||||||| ||||| Sbjct: 4749846 cttcctcgccgtcgtcatcctcgtcgtcg 4749874
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 acgccaagcccgacctcaccc 353 ||||||||||||||||||||| Sbjct: 4654111 acgccaagcccgacctcaccc 4654131
>ref|NM_129793.4| Arabidopsis thaliana unknown protein AT2G42310 mRNA, complete cds Length = 678 Score = 40.1 bits (20), Expect = 5.5 Identities = 71/88 (80%) Strand = Plus / Plus Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311 ||||||| || ||||| || |||||||| || |||||| ||||| |||||| || | | Sbjct: 203 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 262 Query: 312 tcatcctcggcgtcgggctcaacgccaa 339 | ||||||||||| || ||||| ||||| Sbjct: 263 ttatcctcggcgttggactcaatgccaa 290
>ref|XM_510802.1| PREDICTED: Pan troglodytes similar to LP8272 (LOC453902), mRNA Length = 622 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 gagcgcctccagcagcaggagctc 406 |||||||||||||||| ||||||| Sbjct: 272 gagcgcctccagcagctggagctc 295
>ref|XM_482475.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3182 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cctccttcctcaccgtcgtc 313 |||||||||||||||||||| Sbjct: 348 cctccttcctcaccgtcgtc 367
>ref|NM_001015508.1| Homo sapiens purine-rich element binding protein G (PURG), transcript variant B, mRNA Length = 2709 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 702 ccgcacgccgccgccgcccg 683
>ref|NM_185546.1| Oryza sativa (japonica cultivar-group), mRNA Length = 915 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cgtcgtcatcctcggcgtcg 326 |||||||||||||||||||| Sbjct: 407 cgtcgtcatcctcggcgtcg 426
>gb|BT018853.1| Zea mays clone EL01N0555H12.d mRNA sequence Length = 1287 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 ccgccgccgcccggcgagtcgcgc 259 ||||||||||||| |||||||||| Sbjct: 384 ccgccgccgcccgacgagtcgcgc 407
>ref|XM_367864.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07768.4) partial mRNA Length = 5043 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gcaccagaaggcgctcgagc 386 |||||||||||||||||||| Sbjct: 1878 gcaccagaaggcgctcgagc 1897
>gb|AC147225.3| Mus musculus BAC clone RP23-105L19 from chromosome 6, complete sequence Length = 210239 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cacgcgcaccaaccgggcacgatg 88 ||||||||||||||||||| |||| Sbjct: 149044 cacgcgcaccaaccgggcaggatg 149021
>gb|AC168278.2| Mus musculus BAC RP24-83C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 247493 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 cacgcgcaccaaccgggcacgatg 88 ||||||||||||||||||| |||| Sbjct: 167764 cacgcgcaccaaccgggcaggatg 167787
>ref|NM_015686.2| Homo sapiens transmembrane protein 28 (TMEM28), mRNA Length = 4050 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cgccgccgccgcccggcgag 253 |||||||||||||||||||| Sbjct: 347 cgccgccgccgcccggcgag 366
>ref|NM_031866.1| Homo sapiens frizzled homolog 8 (Drosophila) (FZD8), mRNA Length = 3195 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cgccgccgccgcccggcgag 253 |||||||||||||||||||| Sbjct: 508 cgccgccgccgcccggcgag 527
>ref|XM_844150.1| PREDICTED: Canis familiaris similar to transmembrane protein 28 (LOC607468), mRNA Length = 1449 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cgccgccgccgcccggcgag 253 |||||||||||||||||||| Sbjct: 329 cgccgccgccgcccggcgag 348
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 89768 ccgcacgccgccgccgcccg 89787
>gb|AY442327.1| Homo sapiens Werner syndrome (WRN) gene, complete cds Length = 143624 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 1601 ccgcacgccgccgccgcccg 1620
>emb|CR669668.2|CNS0FFOQ Tetraodon nigroviridis full-length cDNA Length = 2156 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 cgagcgcctccagcagcaggagct 405 |||||| ||||||||||||||||| Sbjct: 89 cgagcggctccagcagcaggagct 112
>emb|AL158069.16| Human DNA sequence from clone RP13-57D9 on chromosome Xq11.2-13.2 Contains the gene for TED protein (TED), the 5' end of the ED1 gene for ectodermal dysplasia 1, anhidrotic, two novel genes and three CpG islands, complete sequence Length = 186538 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cgccgccgccgcccggcgag 253 |||||||||||||||||||| Sbjct: 8098 cgccgccgccgcccggcgag 8117
>emb|AL121749.14|HSBA425A6 Human DNA sequence from clone RP11-425A6 on chromosome 10 Contains the 3' end of the gene for cyclin fold protein 1 (CFP1) (CBCP1), the gene for connexin40.1 (CX40.1) (FLJ90023), the FZD8 gene for frizzled homolog 8 (Drosophila) and two CpG islands, complete sequence Length = 166007 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 cgccgccgccgcccggcgag 253 |||||||||||||||||||| Sbjct: 131100 cgccgccgccgcccggcgag 131081
>gb|AY096421.1| Arabidopsis thaliana unknown protein (At2g42310) mRNA, complete cds Length = 376 Score = 40.1 bits (20), Expect = 5.5 Identities = 71/88 (80%) Strand = Plus / Plus Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311 ||||||| || ||||| || |||||||| || |||||| ||||| |||||| || | | Sbjct: 164 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 223 Query: 312 tcatcctcggcgtcgggctcaacgccaa 339 | ||||||||||| || ||||| ||||| Sbjct: 224 ttatcctcggcgttggactcaatgccaa 251
>gb|AY072190.1| Arabidopsis thaliana unknown protein (At2g42310) mRNA, complete cds Length = 586 Score = 40.1 bits (20), Expect = 5.5 Identities = 71/88 (80%) Strand = Plus / Plus Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311 ||||||| || ||||| || |||||||| || |||||| ||||| |||||| || | | Sbjct: 190 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 249 Query: 312 tcatcctcggcgtcgggctcaacgccaa 339 | ||||||||||| || ||||| ||||| Sbjct: 250 ttatcctcggcgttggactcaatgccaa 277
>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06, complete sequence Length = 160129 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 accgcacgccgccgccgccc 247 |||||||||||||||||||| Sbjct: 81620 accgcacgccgccgccgccc 81601
>emb|AL583921.1|MLEPRTN5 Mycobacterium leprae strain TN complete genome; segment 5/10 Length = 332450 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 cgatgaaccgcacgccgccgccgcccgg 249 ||||||||||||||||| ||||| |||| Sbjct: 226200 cgatgaaccgcacgccgacgccgaccgg 226227
>emb|AL035310.1|MLCB2533 Mycobacterium leprae cosmid B2533 Length = 40245 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 cgatgaaccgcacgccgccgccgcccgg 249 ||||||||||||||||| ||||| |||| Sbjct: 21684 cgatgaaccgcacgccgacgccgaccgg 21711
>gb|AF195513.2| Homo sapiens Pur-gamma A-form (PURG) mRNA, complete cds Length = 2886 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 702 ccgcacgccgccgccgcccg 683
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 cgcacgccgccgccgcccgg 249 |||||||||||||||||||| Sbjct: 4487705 cgcacgccgccgccgcccgg 4487724
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 cacgccgccgccgcccggcg 251 |||||||||||||||||||| Sbjct: 3465532 cacgccgccgccgcccggcg 3465551
>gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map EG05C12, complete sequence Length = 85835 Score = 40.1 bits (20), Expect = 5.5 Identities = 71/88 (80%) Strand = Plus / Plus Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311 ||||||| || ||||| || |||||||| || |||||| ||||| |||||| || | | Sbjct: 8670 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 8729 Query: 312 tcatcctcggcgtcgggctcaacgccaa 339 | ||||||||||| || ||||| ||||| Sbjct: 8730 ttatcctcggcgttggactcaatgccaa 8757
>gb|AC084736.5| Homo sapiens chromosome 8, clone RP11-473A17, complete sequence Length = 180098 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 64368 ccgcacgccgccgccgcccg 64387
>gb|AF411921.1| Chlamydomonas reinhardtii ATP synthase F1F0 subunit 6 (ATP6) gene, complete cds; nuclear gene for mitochondrial product Length = 3497 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 2889 ccgcacgccgccgccgcccg 2870
>gb|AF411119.1| Chlamydomonas reinhardtii ATP synthase F1F0 subunit 6 (ATP6) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2349 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 1739 ccgcacgccgccgccgcccg 1720
>gb|AY077841.1| Homo sapiens Pur-gamma B-form mRNA, complete cds; alternatively spliced Length = 2709 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 702 ccgcacgccgccgccgcccg 683
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcaccgtcgtcatcctcggc 322 |||||||||||||||||||| Sbjct: 1527498 tcaccgtcgtcatcctcggc 1527479
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgtcgtcatcctcggcgtcg 326 |||||||||||||||||||| Sbjct: 3984322 cgtcgtcatcctcggcgtcg 3984303
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgtcgtcatcctcggcgtcg 326 |||||||||||||||||||| Sbjct: 29332620 cgtcgtcatcctcggcgtcg 29332601
>emb|BX821866.1|CNS0AA3W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL80ZC01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 661 Score = 40.1 bits (20), Expect = 5.5 Identities = 71/88 (80%) Strand = Plus / Plus Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311 ||||||| || ||||| || |||||||| || |||||| ||||| |||||| || | | Sbjct: 186 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 245 Query: 312 tcatcctcggcgtcgggctcaacgccaa 339 | ||||||||||| || ||||| ||||| Sbjct: 246 ttatcctcggcgttggactcaatgccaa 273
>emb|BX821369.1|CNS0AA55 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 646 Score = 40.1 bits (20), Expect = 5.5 Identities = 71/88 (80%) Strand = Plus / Plus Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311 ||||||| || ||||| || |||||||| || |||||| ||||| |||||| || | | Sbjct: 203 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 262 Query: 312 tcatcctcggcgtcgggctcaacgccaa 339 | ||||||||||| || ||||| ||||| Sbjct: 263 ttatcctcggcgttggactcaatgccaa 290
>emb|BX821456.1|CNS0A8C6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 612 Score = 40.1 bits (20), Expect = 5.5 Identities = 71/88 (80%) Strand = Plus / Plus Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311 ||||||| || ||||| || |||||||| || |||||| ||||| |||||| || | | Sbjct: 178 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 237 Query: 312 tcatcctcggcgtcgggctcaacgccaa 339 | ||||||||||| || ||||| ||||| Sbjct: 238 ttatcctcggcgttggactcaatgccaa 265
>emb|BX821554.1|CNS0A87O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL52ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 573 Score = 40.1 bits (20), Expect = 5.5 Identities = 71/88 (80%) Strand = Plus / Plus Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311 ||||||| || ||||| || |||||||| || |||||| ||||| |||||| || | | Sbjct: 184 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 243 Query: 312 tcatcctcggcgtcgggctcaacgccaa 339 | ||||||||||| || ||||| ||||| Sbjct: 244 ttatcctcggcgttggactcaatgccaa 271
>emb|BX820665.1|CNS0A81O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 523 Score = 40.1 bits (20), Expect = 5.5 Identities = 71/88 (80%) Strand = Plus / Minus Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311 ||||||| || ||||| || |||||||| || |||||| ||||| |||||| || | | Sbjct: 328 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 269 Query: 312 tcatcctcggcgtcgggctcaacgccaa 339 | ||||||||||| || ||||| ||||| Sbjct: 268 ttatcctcggcgttggactcaatgccaa 241
>gb|AC154389.1| Mus musculus BAC clone RP23-2H9 from chromosome 13, complete sequence Length = 215256 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gtgggaggactgggagctcc 281 |||||||||||||||||||| Sbjct: 85217 gtgggaggactgggagctcc 85198
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgtcgtcatcctcggcgtcg 326 |||||||||||||||||||| Sbjct: 121309 cgtcgtcatcctcggcgtcg 121290
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cctccttcctcaccgtcgtc 313 |||||||||||||||||||| Sbjct: 149074 cctccttcctcaccgtcgtc 149093
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cctccttcctcaccgtcgtc 313 |||||||||||||||||||| Sbjct: 31956 cctccttcctcaccgtcgtc 31975
>dbj|AK119237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D12, full insert sequence Length = 1827 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 37 ccgcacgccgccgccgcccg 56
>dbj|AK072791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141K11, full insert sequence Length = 1831 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cctccttcctcaccgtcgtc 313 |||||||||||||||||||| Sbjct: 329 cctccttcctcaccgtcgtc 348
>dbj|AK069134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007E19, full insert sequence Length = 3183 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cctccttcctcaccgtcgtc 313 |||||||||||||||||||| Sbjct: 348 cctccttcctcaccgtcgtc 367
>gb|AF181896.1|HSWRNG1 Homo sapiens WRN (WRN) gene, partial sequence Length = 98844 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 13523 ccgcacgccgccgccgcccg 13542
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 97211 ccgcacgccgccgccgcccg 97230
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgtcgtcatcctcggcgtcg 326 |||||||||||||||||||| Sbjct: 2014 cgtcgtcatcctcggcgtcg 1995
>dbj|AB001981.1| Columba livia DNA for alpha-D globin, alpha-A globin Length = 5891 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gcctccagcagcaggagctc 406 |||||||||||||||||||| Sbjct: 3826 gcctccagcagcaggagctc 3807
>gb|AF087142.1|AF087142 Homo sapiens TED protein (TED) mRNA, complete cds Length = 4042 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cgccgccgccgcccggcgag 253 |||||||||||||||||||| Sbjct: 346 cgccgccgccgcccggcgag 365
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgtcgtcatcctcggcgtcg 326 |||||||||||||||||||| Sbjct: 3984298 cgtcgtcatcctcggcgtcg 3984279
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgtcgtcatcctcggcgtcg 326 |||||||||||||||||||| Sbjct: 20732 cgtcgtcatcctcggcgtcg 20713
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgtcgtcatcctcggcgtcg 326 |||||||||||||||||||| Sbjct: 146298 cgtcgtcatcctcggcgtcg 146279
>gb|AC123937.3| Mus musculus BAC clone RP23-408M14 from 6, complete sequence Length = 164294 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cacgcgcaccaaccgggcacgatg 88 ||||||||||||||||||| |||| Sbjct: 104879 cacgcgcaccaaccgggcaggatg 104856
>gb|U00017.1|U00017 Mycobacterium leprae cosmid B2126 Length = 42157 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 cgatgaaccgcacgccgccgccgcccgg 249 ||||||||||||||||| ||||| |||| Sbjct: 10003 cgatgaaccgcacgccgacgccgaccgg 9976
>dbj|AB003173.1| Homo sapiens gene for Werner Syndrome helicase, Promoter region and 5'UTR, partial sequence Length = 2775 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ccgcacgccgccgccgcccg 248 |||||||||||||||||||| Sbjct: 1823 ccgcacgccgccgccgcccg 1842
>dbj|AB043703.1| Homo sapiens FZD8 mRNA for seven-transmembrane receptor Frizzled-8, complete cds Length = 3195 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 cgccgccgccgcccggcgag 253 |||||||||||||||||||| Sbjct: 508 cgccgccgccgcccggcgag 527 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,428,323 Number of Sequences: 3902068 Number of extensions: 2428323 Number of successful extensions: 82535 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 79652 Number of HSP's gapped (non-prelim): 2877 length of query: 408 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 386 effective length of database: 17,147,199,772 effective search space: 6618819111992 effective search space used: 6618819111992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)