ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast36b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome... 301 9e-79
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 301 9e-79
3dbj|AK108131.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 9e-79
4gb|AY107905.1| Zea mays PCO122820 mRNA sequence 244 2e-61
5ref|XM_483234.1| Oryza sativa (japonica cultivar-group), mRNA 230 3e-57
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 230 3e-57
7dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic D... 230 3e-57
8dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic D... 230 3e-57
9gb|AC155337.1| Brassica rapa subsp. pekinensis clone KBrH117N09,... 151 2e-33
10ref|XM_469277.1| Oryza sativa (japonica cultivar-group), mRNA 123 5e-25
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 123 5e-25
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
13gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 geno... 123 5e-25
14ref|NM_115639.2| Arabidopsis thaliana unknown protein AT3G57785 ... 72 2e-09
15emb|AL049660.1|ATF15B8 Arabidopsis thaliana DNA chromosome 3, BA... 72 2e-09
16gb|AY136461.1| Arabidopsis thaliana expressed protein (At3g57785... 72 2e-09
17emb|BX826260.1|CNS0A6CP Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
18emb|BX826095.1|CNS0A6FR Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
19emb|BX825433.1|CNS0A6BX Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
20emb|BX842176.1|CNS09YBN Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
21gb|AY086245.1| Arabidopsis thaliana clone 22956 mRNA, complete s... 72 2e-09
22gb|BT001251.1| Arabidopsis thaliana expressed protein (At3g57785... 72 2e-09
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
24dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
25gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, com... 68 2e-08
26dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone... 62 1e-06
27dbj|AP004955.1| Lotus japonicus genomic DNA, chromosome 1, clone... 62 1e-06
28emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, B... 56 9e-05
29gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
30dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
31ref|XM_474411.1| Oryza sativa (japonica cultivar-group), predic... 52 0.001
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
33dbj|AK105205.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
34emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 52 0.001
35emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 52 0.001
36gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complet... 46 0.089
37gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, comple... 46 0.089
38dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
39ref|NM_204644.1| Gallus gallus multiple inositol polyphosphate h... 44 0.35
40gb|U59421.1|GGU59421 Gallus gallus histidine phosphatase of the ... 44 0.35
41gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genom... 42 1.4
42gb|BC103725.1| Homo sapiens cDNA clone IMAGE:5784399, with appar... 42 1.4
43gb|AY203956.1| Homo sapiens LP8272 mRNA, complete cds 42 1.4
44gb|BC001908.1| Homo sapiens chromosome 16 open reading frame 68,... 42 1.4
45dbj|AK022495.1| Homo sapiens cDNA FLJ12433 fis, clone NT2RM1000032 42 1.4
46gb|AC116441.2| Homo sapiens chromosome 3 clone RP11-20O23, compl... 42 1.4
47gb|AC099560.2| Homo sapiens chromosome 3 clone RP11-761N21, comp... 42 1.4
48ref|XM_692023.1| PREDICTED: Danio rerio similar to PAP associate... 42 1.4
49emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in ... 42 1.4
50gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, comple... 42 1.4
51gb|AF546148.1|AF546147S2 Streptomyces kaniharaensis PksE (pksE) ... 42 1.4
52gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.4
53dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.4
54dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.4
55ref|NM_129793.4| Arabidopsis thaliana unknown protein AT2G42310 ... 40 5.5
56ref|XM_510802.1| PREDICTED: Pan troglodytes similar to LP8272 (L... 40 5.5
57ref|XM_482475.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
58ref|NM_001015508.1| Homo sapiens purine-rich element binding pro... 40 5.5
59ref|NM_185546.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
60gb|BT018853.1| Zea mays clone EL01N0555H12.d mRNA sequence 40 5.5
61ref|XM_367864.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 5.5
62gb|AC147225.3| Mus musculus BAC clone RP23-105L19 from chromosom... 40 5.5
63gb|AC168278.2| Mus musculus BAC RP24-83C9 (Roswell Park Cancer ... 40 5.5
64ref|NM_015686.2| Homo sapiens transmembrane protein 28 (TMEM28),... 40 5.5
65ref|NM_031866.1| Homo sapiens frizzled homolog 8 (Drosophila) (F... 40 5.5
66ref|XM_844150.1| PREDICTED: Canis familiaris similar to transmem... 40 5.5
67emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.5
68gb|AY442327.1| Homo sapiens Werner syndrome (WRN) gene, complete... 40 5.5
69emb|CR669668.2|CNS0FFOQ Tetraodon nigroviridis full-length cDNA 40 5.5
70emb|AL158069.16| Human DNA sequence from clone RP13-57D9 on chro... 40 5.5
71emb|AL121749.14|HSBA425A6 Human DNA sequence from clone RP11-425... 40 5.5
72gb|AY096421.1| Arabidopsis thaliana unknown protein (At2g42310) ... 40 5.5
73gb|AY072190.1| Arabidopsis thaliana unknown protein (At2g42310) ... 40 5.5
74emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4,... 40 5.5
75emb|AL583921.1|MLEPRTN5 Mycobacterium leprae strain TN complete ... 40 5.5
76emb|AL035310.1|MLCB2533 Mycobacterium leprae cosmid B2533 40 5.5
77gb|AF195513.2| Homo sapiens Pur-gamma A-form (PURG) mRNA, comple... 40 5.5
78gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 5.5
79dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.5
80gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map... 40 5.5
81gb|AC084736.5| Homo sapiens chromosome 8, clone RP11-473A17, com... 40 5.5
82gb|AF411921.1| Chlamydomonas reinhardtii ATP synthase F1F0 subun... 40 5.5
83gb|AF411119.1| Chlamydomonas reinhardtii ATP synthase F1F0 subun... 40 5.5
84gb|AY077841.1| Homo sapiens Pur-gamma B-form mRNA, complete cds;... 40 5.5
85gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.5
86dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
87dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
88emb|BX821866.1|CNS0AA3W Arabidopsis thaliana Full-length cDNA Co... 40 5.5
89emb|BX821369.1|CNS0AA55 Arabidopsis thaliana Full-length cDNA Co... 40 5.5
90emb|BX821456.1|CNS0A8C6 Arabidopsis thaliana Full-length cDNA Co... 40 5.5
91emb|BX821554.1|CNS0A87O Arabidopsis thaliana Full-length cDNA Co... 40 5.5
92emb|BX820665.1|CNS0A81O Arabidopsis thaliana Full-length cDNA Co... 40 5.5
93gb|AC154389.1| Mus musculus BAC clone RP23-2H9 from chromosome 1... 40 5.5
94dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
95dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
96dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
97dbj|AK119237.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
98dbj|AK072791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
99dbj|AK069134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
100gb|AF181896.1|HSWRNG1 Homo sapiens WRN (WRN) gene, partial sequence 40 5.5
101emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.5
102gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipie... 40 5.5
103dbj|AB001981.1| Columba livia DNA for alpha-D globin, alpha-A gl... 40 5.5
104gb|AF087142.1|AF087142 Homo sapiens TED protein (TED) mRNA, comp... 40 5.5
105gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
106emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.5
107emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.5
108gb|AC123937.3| Mus musculus BAC clone RP23-408M14 from 6, comple... 40 5.5
109gb|U00017.1|U00017 Mycobacterium leprae cosmid B2126 40 5.5
110dbj|AB003173.1| Homo sapiens gene for Werner Syndrome helicase, ... 40 5.5
111dbj|AB043703.1| Homo sapiens FZD8 mRNA for seven-transmembrane r... 40 5.5

>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0066E19, complete sequence
          Length = 145575

 Score =  301 bits (152), Expect = 9e-79
 Identities = 206/224 (91%)
 Strand = Plus / Minus

                                                                         
Query: 182   tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241
             |||||||| ||||||||||||| || ||||||||| ||||   | |||||  ||||||||
Sbjct: 28731 tggacgaccccggggcacgaggagcagcccaagggctacctattcaaccggccgccgccg 28672

                                                                         
Query: 242   ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301
             ||| | || |||||||| |||||||||||||||||| | ||||| ||||||||||| |||
Sbjct: 28671 ccggcgggggagtcgcggaagtgggaggactgggagttgccctgctacgtcacctcgttc 28612

                                                                         
Query: 302   ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28611 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 28552

                                                         
Query: 362   tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 405
             ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28551 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 28508



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  301 bits (152), Expect = 9e-79
 Identities = 206/224 (91%)
 Strand = Plus / Minus

                                                                            
Query: 182      tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241
                |||||||| ||||||||||||| || ||||||||| ||||   | |||||  ||||||||
Sbjct: 18630855 tggacgaccccggggcacgaggagcagcccaagggctacctattcaaccggccgccgccg 18630796

                                                                            
Query: 242      ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301
                ||| | || |||||||| |||||||||||||||||| | ||||| ||||||||||| |||
Sbjct: 18630795 ccggcgggggagtcgcggaagtgggaggactgggagttgccctgctacgtcacctcgttc 18630736

                                                                            
Query: 302      ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18630735 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 18630676

                                                            
Query: 362      tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 405
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18630675 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 18630632



to top

>dbj|AK108131.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-D10, full
           insert sequence
          Length = 675

 Score =  301 bits (152), Expect = 9e-79
 Identities = 206/224 (91%)
 Strand = Plus / Plus

                                                                       
Query: 182 tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241
           |||||||| ||||||||||||| || ||||||||| ||||   | |||||  ||||||||
Sbjct: 201 tggacgaccccggggcacgaggagcagcccaagggctacctattcaaccggccgccgccg 260

                                                                       
Query: 242 ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301
           ||| | || |||||||| |||||||||||||||||| | ||||| ||||||||||| |||
Sbjct: 261 ccggcgggggagtcgcggaagtgggaggactgggagttgccctgctacgtcacctcgttc 320

                                                                       
Query: 302 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 380

                                                       
Query: 362 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 405
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagct 424



to top

>gb|AY107905.1| Zea mays PCO122820 mRNA sequence
          Length = 653

 Score =  244 bits (123), Expect = 2e-61
 Identities = 201/227 (88%)
 Strand = Plus / Plus

                                                                       
Query: 182 tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241
           |||||||| || || ||||||| ||| |||||||||||||   | |||||  ||||||||
Sbjct: 179 tggacgaccccaggtcacgaggagcgccccaaggggtacctcttcaaccggccgccgccg 238

                                                                       
Query: 242 ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301
           || || || || || |||||||||||||| |||||||| ||||| ||||| |||||||||
Sbjct: 239 cctccgggggaatctcgcaagtgggaggattgggagctgccctgctacgtgacctccttc 298

                                                                       
Query: 302 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361
           |||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||||| 
Sbjct: 299 ctcaccgtcgtcatcctcggcgtcggcctcaacgcgaagcccgaccttacaatcgagacg 358

                                                          
Query: 362 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 408
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 405



to top

>ref|XM_483234.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 330

 Score =  230 bits (116), Expect = 3e-57
 Identities = 199/227 (87%), Gaps = 6/227 (2%)
 Strand = Plus / Plus

                                                                       
Query: 182 tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241
           ||||||||||| |||||||||| ||||||||||||| |||   | |||||      ||||
Sbjct: 79  tggacgacgcccgggcacgaggagcggcccaaggggcacctcttcaaccg------gccg 132

                                                                       
Query: 242 ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301
           ||||| || |||||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 133 ccgccgggggagtcgcggaagtgggaggactgggagcttccctgctacgtcacctccttc 192

                                                                       
Query: 302 ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361
           |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| 
Sbjct: 193 ctcaccgtcgccatcctcggcgtcggcctcagcgccaagcccgacctcaccctcgagacg 252

                                                          
Query: 362 tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 408
           ||||||||||| ||||| ||||| ||||||||| || |||| |||||
Sbjct: 253 tgggcgcaccacaaggccctcgaccgcctccaggagaaggacctcgc 299



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  230 bits (116), Expect = 3e-57
 Identities = 199/227 (87%), Gaps = 6/227 (2%)
 Strand = Plus / Plus

                                                                            
Query: 182      tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241
                ||||||||||| |||||||||| ||||||||||||| |||   | |||||      ||||
Sbjct: 24969122 tggacgacgcccgggcacgaggagcggcccaaggggcacctcttcaaccg------gccg 24969175

                                                                            
Query: 242      ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301
                ||||| || |||||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 24969176 ccgccgggggagtcgcggaagtgggaggactgggagcttccctgctacgtcacctccttc 24969235

                                                                            
Query: 302      ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361
                |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| 
Sbjct: 24969236 ctcaccgtcgccatcctcggcgtcggcctcagcgccaagcccgacctcaccctcgagacg 24969295

                                                               
Query: 362      tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 408
                ||||||||||| ||||| ||||| ||||||||| || |||| |||||
Sbjct: 24969296 tgggcgcaccacaaggccctcgaccgcctccaggagaaggacctcgc 24969342



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 289      cgtcacctccttcctcaccgtcgtcatcctc 319
                |||| |||||||||||||| |||||||||||
Sbjct: 19786766 cgtcgcctccttcctcaccatcgtcatcctc 19786796



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 294      cctccttcctcaccgtcgtc 313
                ||||||||||||||||||||
Sbjct: 20401326 cctccttcctcaccgtcgtc 20401345



to top

>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0025J22
          Length = 175355

 Score =  230 bits (116), Expect = 3e-57
 Identities = 199/227 (87%), Gaps = 6/227 (2%)
 Strand = Plus / Plus

                                                                         
Query: 182   tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241
             ||||||||||| |||||||||| ||||||||||||| |||   | |||||      ||||
Sbjct: 25238 tggacgacgcccgggcacgaggagcggcccaaggggcacctcttcaaccg------gccg 25291

                                                                         
Query: 242   ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301
             ||||| || |||||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 25292 ccgccgggggagtcgcggaagtgggaggactgggagcttccctgctacgtcacctccttc 25351

                                                                         
Query: 302   ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361
             |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| 
Sbjct: 25352 ctcaccgtcgccatcctcggcgtcggcctcagcgccaagcccgacctcaccctcgagacg 25411

                                                            
Query: 362   tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 408
             ||||||||||| ||||| ||||| ||||||||| || |||| |||||
Sbjct: 25412 tgggcgcaccacaaggccctcgaccgcctccaggagaaggacctcgc 25458



to top

>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1134_H03
          Length = 135914

 Score =  230 bits (116), Expect = 3e-57
 Identities = 199/227 (87%), Gaps = 6/227 (2%)
 Strand = Plus / Plus

                                                                         
Query: 182   tggacgacgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccg 241
             ||||||||||| |||||||||| ||||||||||||| |||   | |||||      ||||
Sbjct: 70837 tggacgacgcccgggcacgaggagcggcccaaggggcacctcttcaaccg------gccg 70890

                                                                         
Query: 242   ccgcccggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttc 301
             ||||| || |||||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 70891 ccgccgggggagtcgcggaagtgggaggactgggagcttccctgctacgtcacctccttc 70950

                                                                         
Query: 302   ctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacc 361
             |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| 
Sbjct: 70951 ctcaccgtcgccatcctcggcgtcggcctcagcgccaagcccgacctcaccctcgagacg 71010

                                                            
Query: 362   tgggcgcaccagaaggcgctcgagcgcctccagcagcaggagctcgc 408
             ||||||||||| ||||| ||||| ||||||||| || |||| |||||
Sbjct: 71011 tgggcgcaccacaaggccctcgaccgcctccaggagaaggacctcgc 71057



to top

>gb|AC155337.1| Brassica rapa subsp. pekinensis clone KBrH117N09, complete sequence
          Length = 125390

 Score =  151 bits (76), Expect = 2e-33
 Identities = 172/204 (84%)
 Strand = Plus / Plus

                                                                         
Query: 188   acgccggggcacgaggtgcggcccaaggggtacccgatgaaccgcacgccgccgccgccc 247
             |||||||| ||||||| |||||||||||| |||   ||||||||||| || |||||||| 
Sbjct: 83683 acgccgggccacgaggagcggcccaagggctacttcatgaaccgcacccctccgccgccg 83742

                                                                         
Query: 248   ggcgagtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcacc 307
             ||  |||||||||| ||||||||||||||||| || || ||| ||||   ||||||||| 
Sbjct: 83743 ggacagtcgcgcaaatgggaggactgggagcttccttgctacatcacgagcttcctcacg 83802

                                                                         
Query: 308   gtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagacctgggcg 367
              |||||||||||||||||||||||||||| || ||||| ||| |  ||||||||||||| 
Sbjct: 83803 atcgtcatcctcggcgtcgggctcaacgctaaacccgatctctcgatcgagacctgggcc 83862

                                     
Query: 368   caccagaaggcgctcgagcgcctc 391
             || |||||||| || || ||||||
Sbjct: 83863 catcagaaggccctggaacgcctc 83886



to top

>ref|XM_469277.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 804

 Score =  123 bits (62), Expect = 5e-25
 Identities = 104/118 (88%)
 Strand = Plus / Plus

                                                                       
Query: 258 gcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcc 317
           ||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||| |
Sbjct: 596 gcaagtgggtggactgggagcttccctgctacctcacctccttcctcaccgtcgtcattc 655

                                                                     
Query: 318 tcggcgtcgggctcaacgccaagcccgacctcaccctcgagacctgggcgcaccagaa 375
           ||||| || |||||||||| |||||| || |||||||  ||||| || ||||||||||
Sbjct: 656 tcggcatcaggctcaacgcgaagcccaacttcaccctgcagacccggccgcaccagaa 713



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  123 bits (62), Expect = 5e-25
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                            
Query: 258      gcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcc 317
                ||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||| |
Sbjct: 26503177 gcaagtgggtggactgggagcttccctgctacctcacctccttcctcaccgtcgtcattc 26503118

                                                                          
Query: 318      tcggcgtcgggctcaacgccaagcccgacctcaccctcgagacctgggcgcaccagaa 375
                ||||| || |||||||||| |||||| || |||||||  ||||| || ||||||||||
Sbjct: 26503117 tcggcatcaggctcaacgcgaagcccaacttcaccctgcagacccggccgcaccagaa 26503060



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 49       aatcctccaccacgcacacgc 69
                |||||||||||||||||||||
Sbjct: 29830552 aatcctccaccacgcacacgc 29830572



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  123 bits (62), Expect = 5e-25
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                            
Query: 258      gcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcc 317
                ||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||| |
Sbjct: 26594500 gcaagtgggtggactgggagcttccctgctacctcacctccttcctcaccgtcgtcattc 26594441

                                                                          
Query: 318      tcggcgtcgggctcaacgccaagcccgacctcaccctcgagacctgggcgcaccagaa 375
                ||||| || |||||||||| |||||| || |||||||  ||||| || ||||||||||
Sbjct: 26594440 tcggcatcaggctcaacgcgaagcccaacttcaccctgcagacccggccgcaccagaa 26594383



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 49       aatcctccaccacgcacacgc 69
                |||||||||||||||||||||
Sbjct: 29921974 aatcctccaccacgcacacgc 29921994



to top

>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete
             sequence
          Length = 136712

 Score =  123 bits (62), Expect = 5e-25
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                         
Query: 258   gcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcc 317
             ||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||| |
Sbjct: 25991 gcaagtgggtggactgggagcttccctgctacctcacctccttcctcaccgtcgtcattc 25932

                                                                       
Query: 318   tcggcgtcgggctcaacgccaagcccgacctcaccctcgagacctgggcgcaccagaa 375
             ||||| || |||||||||| |||||| || |||||||  ||||| || ||||||||||
Sbjct: 25931 tcggcatcaggctcaacgcgaagcccaacttcaccctgcagacccggccgcaccagaa 25874



to top

>ref|NM_115639.2| Arabidopsis thaliana unknown protein AT3G57785 mRNA, complete cds
          Length = 644

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283
           |||||||| || |||||||| || ||  |||||||||||||||| || |||||||| || 
Sbjct: 174 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 233

                                                                       
Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343
           |||||| ||||   |||||||||  | || |||||||| || || ||||| ||||| || 
Sbjct: 234 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 293

                                                           
Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391
           || ||  |  ||||||||||||| |||||||| || || |||||||||
Sbjct: 294 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 341



to top

>emb|AL049660.1|ATF15B8 Arabidopsis thaliana DNA chromosome 3, BAC clone F15B8
          Length = 94378

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Plus

                                                                        
Query: 224  atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283
            |||||||| || |||||||| || ||  |||||||||||||||| || |||||||| || 
Sbjct: 5005 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 5064

                                                                        
Query: 284  tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343
            |||||| ||||   |||||||||  | || |||||||| || || ||||| ||||| || 
Sbjct: 5065 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 5124

                                                            
Query: 344  gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391
            || ||  |  ||||||||||||| |||||||| || || |||||||||
Sbjct: 5125 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 5172



to top

>gb|AY136461.1| Arabidopsis thaliana expressed protein (At3g57785) mRNA, complete
           cds
          Length = 621

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283
           |||||||| || |||||||| || ||  |||||||||||||||| || |||||||| || 
Sbjct: 154 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 213

                                                                       
Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343
           |||||| ||||   |||||||||  | || |||||||| || || ||||| ||||| || 
Sbjct: 214 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 273

                                                           
Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391
           || ||  |  ||||||||||||| |||||||| || || |||||||||
Sbjct: 274 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 321



to top

>emb|BX826260.1|CNS0A6CP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL94ZG09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 526

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283
           |||||||| || |||||||| || ||  |||||||||||||||| || |||||||| || 
Sbjct: 72  atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 131

                                                                       
Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343
           |||||| ||||   |||||||||  | || |||||||| || || ||||| ||||| || 
Sbjct: 132 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 191

                                                           
Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391
           || ||  |  ||||||||||||| |||||||| || || |||||||||
Sbjct: 192 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 239



to top

>emb|BX826095.1|CNS0A6FR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL84ZE05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 603

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283
           |||||||| || |||||||| || ||  |||||||||||||||| || |||||||| || 
Sbjct: 149 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 208

                                                                       
Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343
           |||||| ||||   |||||||||  | || |||||||| || || ||||| ||||| || 
Sbjct: 209 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 268

                                                           
Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391
           || ||  |  ||||||||||||| |||||||| || || |||||||||
Sbjct: 269 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 316



to top

>emb|BX825433.1|CNS0A6BX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL37ZA06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 612

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283
           |||||||| || |||||||| || ||  |||||||||||||||| || |||||||| || 
Sbjct: 142 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 201

                                                                       
Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343
           |||||| ||||   |||||||||  | || |||||||| || || ||||| ||||| || 
Sbjct: 202 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 261

                                                           
Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391
           || ||  |  ||||||||||||| |||||||| || || |||||||||
Sbjct: 262 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 309



to top

>emb|BX842176.1|CNS09YBN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL17ZB01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 632

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283
           |||||||| || |||||||| || ||  |||||||||||||||| || |||||||| || 
Sbjct: 162 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 221

                                                                       
Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343
           |||||| ||||   |||||||||  | || |||||||| || || ||||| ||||| || 
Sbjct: 222 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 281

                                                           
Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391
           || ||  |  ||||||||||||| |||||||| || || |||||||||
Sbjct: 282 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 329



to top

>gb|AY086245.1| Arabidopsis thaliana clone 22956 mRNA, complete sequence
          Length = 642

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283
           |||||||| || |||||||| || ||  |||||||||||||||| || |||||||| || 
Sbjct: 174 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 233

                                                                       
Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343
           |||||| ||||   |||||||||  | || |||||||| || || ||||| ||||| || 
Sbjct: 234 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 293

                                                           
Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391
           || ||  |  ||||||||||||| |||||||| || || |||||||||
Sbjct: 294 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 341



to top

>gb|BT001251.1| Arabidopsis thaliana expressed protein (At3g57785) mRNA, complete
           cds
          Length = 489

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Plus

                                                                       
Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283
           |||||||| || |||||||| || ||  |||||||||||||||| || |||||||| || 
Sbjct: 136 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 195

                                                                       
Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaagccc 343
           |||||| ||||   |||||||||  | || |||||||| || || ||||| ||||| || 
Sbjct: 196 tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaaacct 255

                                                           
Query: 344 gacctcaccctcgagacctgggcgcaccagaaggcgctcgagcgcctc 391
           || ||  |  ||||||||||||| |||||||| || || |||||||||
Sbjct: 256 gatctttcaatcgagacctgggctcaccagaaagctcttgagcgcctc 303



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                            
Query: 301      cctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagac 360
                ||||||||||||||| |||||| || |||||||| | |||||| ||||||||||  ||||
Sbjct: 18346190 cctcaccgtcgtcattctcggcatcaggctcaacacaaagcccaacctcaccctgcagac 18346249

                               
Query: 361      ctgggcgcaccagaa 375
                |||| ||||| ||||
Sbjct: 18346250 ctggccgcactagaa 18346264



to top

>dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1108H10
          Length = 136357

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                          
Query: 301    cctcaccgtcgtcatcctcggcgtcgggctcaacgccaagcccgacctcaccctcgagac 360
              ||||||||||||||| |||||| || |||||||| | |||||| ||||||||||  ||||
Sbjct: 103524 cctcaccgtcgtcattctcggcatcaggctcaacacaaagcccaacctcaccctgcagac 103583

                             
Query: 361    ctgggcgcaccagaa 375
              |||| ||||| ||||
Sbjct: 103584 ctggccgcactagaa 103598



to top

>gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, complete sequence
          Length = 105308

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                         
Query: 263   tgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcctcggc 322
             |||||||| ||||| ||||| || ||| |||||  |||| ||||| |||||||||| || 
Sbjct: 44827 tgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggt 44768

                                                               
Query: 323   gtcgggctcaacgccaagcccgacctcaccctcgagacctgggcgcacca 372
             || || ||||| ||||||||||| |||||||| || || ||||| |||||
Sbjct: 44767 gtgggactcaatgccaagcccgatctcacccttgaaacttgggcccacca 44718



to top

>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181,
             complete sequence
          Length = 185320

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                         
Query: 263   tgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcctcggc 322
             ||||| || ||||| |||||||| ||| |||||  |||||||||| |||| ||| | |||
Sbjct: 63912 tgggaagattgggaactcccctgctacatcaccagcttcctcaccatcgtgatcttgggc 63971

                                    
Query: 323   gtcgggctcaacgccaagcccga 345
             || || |||||||||||||||||
Sbjct: 63972 gttggtctcaacgccaagcccga 63994



to top

>dbj|AP004955.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT19K21, TM0132,
             complete sequence
          Length = 59303

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                         
Query: 263   tgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcgtcatcctcggc 322
             ||||| || ||||| |||||||| ||| |||||  |||||||||| |||| ||| | |||
Sbjct: 43392 tgggaagattgggaactcccctgctacatcaccagcttcctcaccatcgtgatcttgggc 43451

                                    
Query: 323   gtcgggctcaacgccaagcccga 345
             || || |||||||||||||||||
Sbjct: 43452 gttggtctcaacgccaagcccga 43474



to top

>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17
          Length = 109016

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 224 atgaaccgcacgccgccgccgcccggcgagtcgcgcaagtgggaggactgggagctcccc 283
           |||||||| || |||||||| || ||  |||||||||||||||| || |||||||| || 
Sbjct: 123 atgaaccggactccgccgcctccaggacagtcgcgcaagtgggaagattgggagcttcca 64

                                                                   
Query: 284 tgttacgtcacctccttcctcaccgtcgtcatcctcggcgtcgggctcaacgccaa 339
           |||||| ||||   |||||||||  | || |||||||| || || ||||| |||||
Sbjct: 63  tgttacatcacaagcttcctcacgattgtaatcctcggagtgggtctcaatgccaa 8



to top

>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15,
              complete sequence
          Length = 168519

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                             
Query: 289    cgtcacctccttcctcaccgtcgtcatcctc 319
              |||| ||||||||||||||||||||||||||
Sbjct: 115337 cgtcgcctccttcctcaccgtcgtcatcctc 115307



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 289      cgtcacctccttcctcaccgtcgtcatcctc 319
                |||| ||||||||||||||||||||||||||
Sbjct: 23429801 cgtcgcctccttcctcaccgtcgtcatcctc 23429771



to top

>ref|XM_474411.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 675

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 294 cctccttcctcaccgtcgtcatcctc 319
           ||||||||||||||||||||||||||
Sbjct: 605 cctccttcctcaccgtcgtcatcctc 630



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 294      cctccttcctcaccgtcgtcatcctc 319
                ||||||||||||||||||||||||||
Sbjct: 34986493 cctccttcctcaccgtcgtcatcctc 34986518



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 229      ccgcacgccgccgccgcccg 248
                ||||||||||||||||||||
Sbjct: 24969183 ccgcacgccgccgccgcccg 24969202



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 228     accgcacgccgccgccgccc 247
               ||||||||||||||||||||
Sbjct: 6660664 accgcacgccgccgccgccc 6660645



to top

>dbj|AK105205.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G03, full
           insert sequence
          Length = 592

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 294 cctccttcctcaccgtcgtcatcctc 319
           ||||||||||||||||||||||||||
Sbjct: 221 cctccttcctcaccgtcgtcatcctc 246



to top

>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 294   cctccttcctcaccgtcgtcatcctc 319
             ||||||||||||||||||||||||||
Sbjct: 16649 cctccttcctcaccgtcgtcatcctc 16674



to top

>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
             complete sequence
          Length = 145391

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 294   cctccttcctcaccgtcgtcatcctc 319
             ||||||||||||||||||||||||||
Sbjct: 45543 cctccttcctcaccgtcgtcatcctc 45568



to top

>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence
          Length = 48498

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 234  cgccgccgccgcccggcgagtcg 256
            |||||||||||||||||||||||
Sbjct: 8294 cgccgccgccgcccggcgagtcg 8316



to top

>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence
          Length = 168794

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 234    cgccgccgccgcccggcgagtcg 256
              |||||||||||||||||||||||
Sbjct: 155809 cgccgccgccgcccggcgagtcg 155831



to top

>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0007M04
          Length = 176293

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 289    cgtcacctccttcctcaccgtcgtcatcctc 319
              |||| |||||||||||||| |||||||||||
Sbjct: 115717 cgtcgcctccttcctcaccatcgtcatcctc 115747



to top

>ref|NM_204644.1| Gallus gallus multiple inositol polyphosphate histidine
           phosphatase, 1 (MINPP1), mRNA
          Length = 1587

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 229 ccgcacgccgccgccgcccggc 250
           ||||||||||||||||||||||
Sbjct: 219 ccgcacgccgccgccgcccggc 240



to top

>gb|U59421.1|GGU59421 Gallus gallus histidine phosphatase of the endoplasmic reticulum
           (HiPER1) mRNA, complete cds
          Length = 1587

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 229 ccgcacgccgccgccgcccggc 250
           ||||||||||||||||||||||
Sbjct: 219 ccgcacgccgccgccgcccggc 240



to top

>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete
             sequence
          Length = 112892

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    aatcctccaccacgcacacgc 69
             |||||||||||||||||||||
Sbjct: 18909 aatcctccaccacgcacacgc 18889



to top

>gb|BC103725.1| Homo sapiens cDNA clone IMAGE:5784399, with apparent retained intron
          Length = 1697

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 382  cgagcgcctccagcagcaggagctc 406
            ||||||||||||||||| |||||||
Sbjct: 1551 cgagcgcctccagcagctggagctc 1575



to top

>gb|AY203956.1| Homo sapiens LP8272 mRNA, complete cds
          Length = 1083

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 382 cgagcgcctccagcagcaggagctc 406
           ||||||||||||||||| |||||||
Sbjct: 933 cgagcgcctccagcagctggagctc 957



to top

>gb|BC001908.1| Homo sapiens chromosome 16 open reading frame 68, mRNA (cDNA clone
            MGC:2654 IMAGE:3536628), complete cds
          Length = 1525

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 382  cgagcgcctccagcagcaggagctc 406
            ||||||||||||||||| |||||||
Sbjct: 1375 cgagcgcctccagcagctggagctc 1399



to top

>dbj|AK022495.1| Homo sapiens cDNA FLJ12433 fis, clone NT2RM1000032
          Length = 1485

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 382  cgagcgcctccagcagcaggagctc 406
            ||||||||||||||||| |||||||
Sbjct: 1359 cgagcgcctccagcagctggagctc 1383



to top

>gb|AC116441.2| Homo sapiens chromosome 3 clone RP11-20O23, complete sequence
          Length = 142374

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   gactgggagctcccctgttac 289
             |||||||||||||||||||||
Sbjct: 76522 gactgggagctcccctgttac 76502



to top

>gb|AC099560.2| Homo sapiens chromosome 3 clone RP11-761N21, complete sequence
          Length = 192169

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 269    gactgggagctcccctgttac 289
              |||||||||||||||||||||
Sbjct: 174742 gactgggagctcccctgttac 174762



to top

>ref|XM_692023.1| PREDICTED: Danio rerio similar to PAP associated domain containing 5
            (Topoisomerase-related function protein 4-2) (TRF4-2)
            (LOC568678), mRNA
          Length = 1962

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 295  ctccttcctcaccgtcgtcatcctc 319
            ||||||| |||||||||||||||||
Sbjct: 1616 ctccttcatcaccgtcgtcatcctc 1640



to top

>emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in linkage group 7,
             complete sequence
          Length = 170764

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 295   ctccttcctcaccgtcgtcatcctc 319
             ||||||| |||||||||||||||||
Sbjct: 68144 ctccttcatcaccgtcgtcatcctc 68168



to top

>gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, complete sequence
          Length = 63849

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 198   acgaggtgcggcccaaggggt 218
             |||||||||||||||||||||
Sbjct: 60735 acgaggtgcggcccaaggggt 60715



to top

>gb|AF546148.1|AF546147S2 Streptomyces kaniharaensis PksE (pksE) and TebC (tebC) genes,
            complete cds
          Length = 6263

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 387  gcctccagcagcaggagctcg 407
            |||||||||||||||||||||
Sbjct: 1481 gcctccagcagcaggagctcg 1461



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 384     agcgcctccagcagcaggagc 404
               |||||||||||||||||||||
Sbjct: 4474561 agcgcctccagcagcaggagc 4474581



to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 298     cttcctcaccgtcgtcatcctcggcgtcg 326
               ||||||| ||||||||||||||| |||||
Sbjct: 4749846 cttcctcgccgtcgtcatcctcgtcgtcg 4749874



to top

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 333     acgccaagcccgacctcaccc 353
               |||||||||||||||||||||
Sbjct: 4654111 acgccaagcccgacctcaccc 4654131



to top

>ref|NM_129793.4| Arabidopsis thaliana unknown protein AT2G42310 mRNA, complete cds
          Length = 678

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                       
Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311
           ||||||| || ||||| || |||||||| || |||||| |||||  |||||| ||  | |
Sbjct: 203 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 262

                                       
Query: 312 tcatcctcggcgtcgggctcaacgccaa 339
           | ||||||||||| || ||||| |||||
Sbjct: 263 ttatcctcggcgttggactcaatgccaa 290



to top

>ref|XM_510802.1| PREDICTED: Pan troglodytes similar to LP8272 (LOC453902), mRNA
          Length = 622

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 383 gagcgcctccagcagcaggagctc 406
           |||||||||||||||| |||||||
Sbjct: 272 gagcgcctccagcagctggagctc 295



to top

>ref|XM_482475.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3182

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 294 cctccttcctcaccgtcgtc 313
           ||||||||||||||||||||
Sbjct: 348 cctccttcctcaccgtcgtc 367



to top

>ref|NM_001015508.1| Homo sapiens purine-rich element binding protein G (PURG),
           transcript variant B, mRNA
          Length = 2709

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 ccgcacgccgccgccgcccg 248
           ||||||||||||||||||||
Sbjct: 702 ccgcacgccgccgccgcccg 683



to top

>ref|NM_185546.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 cgtcgtcatcctcggcgtcg 326
           ||||||||||||||||||||
Sbjct: 407 cgtcgtcatcctcggcgtcg 426



to top

>gb|BT018853.1| Zea mays clone EL01N0555H12.d mRNA sequence
          Length = 1287

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 236 ccgccgccgcccggcgagtcgcgc 259
           ||||||||||||| ||||||||||
Sbjct: 384 ccgccgccgcccgacgagtcgcgc 407



to top

>ref|XM_367864.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
            (MG07768.4) partial mRNA
          Length = 5043

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 367  gcaccagaaggcgctcgagc 386
            ||||||||||||||||||||
Sbjct: 1878 gcaccagaaggcgctcgagc 1897



to top

>gb|AC147225.3| Mus musculus BAC clone RP23-105L19 from chromosome 6, complete sequence
          Length = 210239

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 65     cacgcgcaccaaccgggcacgatg 88
              ||||||||||||||||||| ||||
Sbjct: 149044 cacgcgcaccaaccgggcaggatg 149021



to top

>gb|AC168278.2| Mus musculus  BAC RP24-83C9 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 247493

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 65     cacgcgcaccaaccgggcacgatg 88
              ||||||||||||||||||| ||||
Sbjct: 167764 cacgcgcaccaaccgggcaggatg 167787



to top

>ref|NM_015686.2| Homo sapiens transmembrane protein 28 (TMEM28), mRNA
          Length = 4050

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 cgccgccgccgcccggcgag 253
           ||||||||||||||||||||
Sbjct: 347 cgccgccgccgcccggcgag 366



to top

>ref|NM_031866.1| Homo sapiens frizzled homolog 8 (Drosophila) (FZD8), mRNA
          Length = 3195

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 cgccgccgccgcccggcgag 253
           ||||||||||||||||||||
Sbjct: 508 cgccgccgccgcccggcgag 527



to top

>ref|XM_844150.1| PREDICTED: Canis familiaris similar to transmembrane protein 28
           (LOC607468), mRNA
          Length = 1449

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 cgccgccgccgcccggcgag 253
           ||||||||||||||||||||
Sbjct: 329 cgccgccgccgcccggcgag 348



to top

>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgcacgccgccgccgcccg 248
             ||||||||||||||||||||
Sbjct: 89768 ccgcacgccgccgccgcccg 89787



to top

>gb|AY442327.1| Homo sapiens Werner syndrome (WRN) gene, complete cds
          Length = 143624

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  ccgcacgccgccgccgcccg 248
            ||||||||||||||||||||
Sbjct: 1601 ccgcacgccgccgccgcccg 1620



to top

>emb|CR669668.2|CNS0FFOQ Tetraodon nigroviridis full-length cDNA
          Length = 2156

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 382 cgagcgcctccagcagcaggagct 405
           |||||| |||||||||||||||||
Sbjct: 89  cgagcggctccagcagcaggagct 112



to top

>emb|AL158069.16| Human DNA sequence from clone RP13-57D9 on chromosome Xq11.2-13.2
            Contains the gene for TED protein (TED),  the 5' end of
            the ED1 gene for ectodermal dysplasia 1, anhidrotic, two
            novel genes and three CpG islands, complete sequence
          Length = 186538

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  cgccgccgccgcccggcgag 253
            ||||||||||||||||||||
Sbjct: 8098 cgccgccgccgcccggcgag 8117



to top

>emb|AL121749.14|HSBA425A6 Human DNA sequence from clone RP11-425A6 on chromosome 10 Contains the 3'
              end of the gene for cyclin fold protein 1 (CFP1) (CBCP1),
              the gene for connexin40.1 (CX40.1) (FLJ90023), the FZD8
              gene for frizzled homolog 8 (Drosophila) and two CpG
              islands, complete sequence
          Length = 166007

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    cgccgccgccgcccggcgag 253
              ||||||||||||||||||||
Sbjct: 131100 cgccgccgccgcccggcgag 131081



to top

>gb|AY096421.1| Arabidopsis thaliana unknown protein (At2g42310) mRNA, complete cds
          Length = 376

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                       
Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311
           ||||||| || ||||| || |||||||| || |||||| |||||  |||||| ||  | |
Sbjct: 164 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 223

                                       
Query: 312 tcatcctcggcgtcgggctcaacgccaa 339
           | ||||||||||| || ||||| |||||
Sbjct: 224 ttatcctcggcgttggactcaatgccaa 251



to top

>gb|AY072190.1| Arabidopsis thaliana unknown protein (At2g42310) mRNA, complete cds
          Length = 586

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                       
Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311
           ||||||| || ||||| || |||||||| || |||||| |||||  |||||| ||  | |
Sbjct: 190 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 249

                                       
Query: 312 tcatcctcggcgtcgggctcaacgccaa 339
           | ||||||||||| || ||||| |||||
Sbjct: 250 ttatcctcggcgttggactcaatgccaa 277



to top

>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06,
             complete sequence
          Length = 160129

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   accgcacgccgccgccgccc 247
             ||||||||||||||||||||
Sbjct: 81620 accgcacgccgccgccgccc 81601



to top

>emb|AL583921.1|MLEPRTN5 Mycobacterium leprae strain TN complete genome; segment 5/10
          Length = 332450

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 222    cgatgaaccgcacgccgccgccgcccgg 249
              ||||||||||||||||| ||||| ||||
Sbjct: 226200 cgatgaaccgcacgccgacgccgaccgg 226227



to top

>emb|AL035310.1|MLCB2533 Mycobacterium leprae cosmid B2533
          Length = 40245

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 222   cgatgaaccgcacgccgccgccgcccgg 249
             ||||||||||||||||| ||||| ||||
Sbjct: 21684 cgatgaaccgcacgccgacgccgaccgg 21711



to top

>gb|AF195513.2| Homo sapiens Pur-gamma A-form (PURG) mRNA, complete cds
          Length = 2886

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 ccgcacgccgccgccgcccg 248
           ||||||||||||||||||||
Sbjct: 702 ccgcacgccgccgccgcccg 683



to top

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 230     cgcacgccgccgccgcccgg 249
               ||||||||||||||||||||
Sbjct: 4487705 cgcacgccgccgccgcccgg 4487724



to top

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 232     cacgccgccgccgcccggcg 251
               ||||||||||||||||||||
Sbjct: 3465532 cacgccgccgccgcccggcg 3465551



to top

>gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map EG05C12, complete
            sequence
          Length = 85835

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                        
Query: 252  agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311
            ||||||| || ||||| || |||||||| || |||||| |||||  |||||| ||  | |
Sbjct: 8670 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 8729

                                        
Query: 312  tcatcctcggcgtcgggctcaacgccaa 339
            | ||||||||||| || ||||| |||||
Sbjct: 8730 ttatcctcggcgttggactcaatgccaa 8757



to top

>gb|AC084736.5| Homo sapiens chromosome 8, clone RP11-473A17, complete sequence
          Length = 180098

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgcacgccgccgccgcccg 248
             ||||||||||||||||||||
Sbjct: 64368 ccgcacgccgccgccgcccg 64387



to top

>gb|AF411921.1| Chlamydomonas reinhardtii ATP synthase F1F0 subunit 6 (ATP6) gene,
            complete cds; nuclear gene for mitochondrial product
          Length = 3497

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  ccgcacgccgccgccgcccg 248
            ||||||||||||||||||||
Sbjct: 2889 ccgcacgccgccgccgcccg 2870



to top

>gb|AF411119.1| Chlamydomonas reinhardtii ATP synthase F1F0 subunit 6 (ATP6) mRNA,
            complete cds; nuclear gene for mitochondrial product
          Length = 2349

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  ccgcacgccgccgccgcccg 248
            ||||||||||||||||||||
Sbjct: 1739 ccgcacgccgccgccgcccg 1720



to top

>gb|AY077841.1| Homo sapiens Pur-gamma B-form mRNA, complete cds; alternatively
           spliced
          Length = 2709

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 ccgcacgccgccgccgcccg 248
           ||||||||||||||||||||
Sbjct: 702 ccgcacgccgccgccgcccg 683



to top

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 303     tcaccgtcgtcatcctcggc 322
               ||||||||||||||||||||
Sbjct: 1527498 tcaccgtcgtcatcctcggc 1527479



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 307     cgtcgtcatcctcggcgtcg 326
               ||||||||||||||||||||
Sbjct: 3984322 cgtcgtcatcctcggcgtcg 3984303



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 307      cgtcgtcatcctcggcgtcg 326
                ||||||||||||||||||||
Sbjct: 29332620 cgtcgtcatcctcggcgtcg 29332601



to top

>emb|BX821866.1|CNS0AA3W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL80ZC01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 661

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                       
Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311
           ||||||| || ||||| || |||||||| || |||||| |||||  |||||| ||  | |
Sbjct: 186 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 245

                                       
Query: 312 tcatcctcggcgtcgggctcaacgccaa 339
           | ||||||||||| || ||||| |||||
Sbjct: 246 ttatcctcggcgttggactcaatgccaa 273



to top

>emb|BX821369.1|CNS0AA55 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL37ZB02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 646

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                       
Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311
           ||||||| || ||||| || |||||||| || |||||| |||||  |||||| ||  | |
Sbjct: 203 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 262

                                       
Query: 312 tcatcctcggcgtcgggctcaacgccaa 339
           | ||||||||||| || ||||| |||||
Sbjct: 263 ttatcctcggcgttggactcaatgccaa 290



to top

>emb|BX821456.1|CNS0A8C6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL43ZB02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 612

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                       
Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311
           ||||||| || ||||| || |||||||| || |||||| |||||  |||||| ||  | |
Sbjct: 178 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 237

                                       
Query: 312 tcatcctcggcgtcgggctcaacgccaa 339
           | ||||||||||| || ||||| |||||
Sbjct: 238 ttatcctcggcgttggactcaatgccaa 265



to top

>emb|BX821554.1|CNS0A87O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL52ZF07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 573

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                       
Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311
           ||||||| || ||||| || |||||||| || |||||| |||||  |||||| ||  | |
Sbjct: 184 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 243

                                       
Query: 312 tcatcctcggcgtcgggctcaacgccaa 339
           | ||||||||||| || ||||| |||||
Sbjct: 244 ttatcctcggcgttggactcaatgccaa 271



to top

>emb|BX820665.1|CNS0A81O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH58ZA03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 523

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 71/88 (80%)
 Strand = Plus / Minus

                                                                       
Query: 252 agtcgcgcaagtgggaggactgggagctcccctgttacgtcacctccttcctcaccgtcg 311
           ||||||| || ||||| || |||||||| || |||||| |||||  |||||| ||  | |
Sbjct: 328 agtcgcgaaaatgggaagattgggagcttccttgttacatcaccagcttccttacaattg 269

                                       
Query: 312 tcatcctcggcgtcgggctcaacgccaa 339
           | ||||||||||| || ||||| |||||
Sbjct: 268 ttatcctcggcgttggactcaatgccaa 241



to top

>gb|AC154389.1| Mus musculus BAC clone RP23-2H9 from chromosome 13, complete sequence
          Length = 215256

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   gtgggaggactgggagctcc 281
             ||||||||||||||||||||
Sbjct: 85217 gtgggaggactgggagctcc 85198



to top

>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0597G07
          Length = 152928

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    cgtcgtcatcctcggcgtcg 326
              ||||||||||||||||||||
Sbjct: 121309 cgtcgtcatcctcggcgtcg 121290



to top

>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0056L09
          Length = 152910

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    cctccttcctcaccgtcgtc 313
              ||||||||||||||||||||
Sbjct: 149074 cctccttcctcaccgtcgtc 149093



to top

>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0456B03
          Length = 152973

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   cctccttcctcaccgtcgtc 313
             ||||||||||||||||||||
Sbjct: 31956 cctccttcctcaccgtcgtc 31975



to top

>dbj|AK119237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D12, full
           insert sequence
          Length = 1827

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 ccgcacgccgccgccgcccg 248
           ||||||||||||||||||||
Sbjct: 37  ccgcacgccgccgccgcccg 56



to top

>dbj|AK072791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141K11, full
           insert sequence
          Length = 1831

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 294 cctccttcctcaccgtcgtc 313
           ||||||||||||||||||||
Sbjct: 329 cctccttcctcaccgtcgtc 348



to top

>dbj|AK069134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007E19, full
           insert sequence
          Length = 3183

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 294 cctccttcctcaccgtcgtc 313
           ||||||||||||||||||||
Sbjct: 348 cctccttcctcaccgtcgtc 367



to top

>gb|AF181896.1|HSWRNG1 Homo sapiens WRN (WRN) gene, partial sequence
          Length = 98844

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgcacgccgccgccgcccg 248
             ||||||||||||||||||||
Sbjct: 13523 ccgcacgccgccgccgcccg 13542



to top

>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   ccgcacgccgccgccgcccg 248
             ||||||||||||||||||||
Sbjct: 97211 ccgcacgccgccgccgcccg 97230



to top

>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940123D9, complete sequence
          Length = 121336

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 307  cgtcgtcatcctcggcgtcg 326
            ||||||||||||||||||||
Sbjct: 2014 cgtcgtcatcctcggcgtcg 1995



to top

>dbj|AB001981.1| Columba livia DNA for alpha-D globin, alpha-A globin
          Length = 5891

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 387  gcctccagcagcaggagctc 406
            ||||||||||||||||||||
Sbjct: 3826 gcctccagcagcaggagctc 3807



to top

>gb|AF087142.1|AF087142 Homo sapiens TED protein (TED) mRNA, complete cds
          Length = 4042

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 cgccgccgccgcccggcgag 253
           ||||||||||||||||||||
Sbjct: 346 cgccgccgccgcccggcgag 365



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 307     cgtcgtcatcctcggcgtcg 326
               ||||||||||||||||||||
Sbjct: 3984298 cgtcgtcatcctcggcgtcg 3984279



to top

>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132682

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   cgtcgtcatcctcggcgtcg 326
             ||||||||||||||||||||
Sbjct: 20732 cgtcgtcatcctcggcgtcg 20713



to top

>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152090

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    cgtcgtcatcctcggcgtcg 326
              ||||||||||||||||||||
Sbjct: 146298 cgtcgtcatcctcggcgtcg 146279



to top

>gb|AC123937.3| Mus musculus BAC clone RP23-408M14 from 6, complete sequence
          Length = 164294

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 65     cacgcgcaccaaccgggcacgatg 88
              ||||||||||||||||||| ||||
Sbjct: 104879 cacgcgcaccaaccgggcaggatg 104856



to top

>gb|U00017.1|U00017 Mycobacterium leprae cosmid B2126
          Length = 42157

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 222   cgatgaaccgcacgccgccgccgcccgg 249
             ||||||||||||||||| ||||| ||||
Sbjct: 10003 cgatgaaccgcacgccgacgccgaccgg 9976



to top

>dbj|AB003173.1| Homo sapiens gene for Werner Syndrome helicase, Promoter region and
            5'UTR, partial sequence
          Length = 2775

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  ccgcacgccgccgccgcccg 248
            ||||||||||||||||||||
Sbjct: 1823 ccgcacgccgccgccgcccg 1842



to top

>dbj|AB043703.1| Homo sapiens FZD8 mRNA for seven-transmembrane receptor Frizzled-8,
           complete cds
          Length = 3195

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 cgccgccgccgcccggcgag 253
           ||||||||||||||||||||
Sbjct: 508 cgccgccgccgcccggcgag 527


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,428,323
Number of Sequences: 3902068
Number of extensions: 2428323
Number of successful extensions: 82535
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 79652
Number of HSP's gapped (non-prelim): 2877
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top