>AMY1_ORYSA (P17654) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase) (Isozyme 1B)
          Length = 434

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 266 AGFLLEPPMDHLNSRPHRQLLGW 334
           A F   P +DHLN R  R+L+GW
Sbjct: 171 ADFAAAPDIDHLNKRVQRELIGW 193

>AM3E_ORYSA (P27934) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1)|
           (1,4-alpha-D-glucan glucanohydrolase)
          Length = 437

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 251 HMHCLAGFLLEPPMDHLNSRPHRQLLGW 334
           H    AGF   P +DHLN R  R+L  W
Sbjct: 161 HRDTGAGFGAAPDIDHLNPRVQRELTDW 188

>RDRP_CGMVS (P69514) RNA-directed RNA polymerase (EC 2.7.7.48) (186 kDa protein)|
            [Contains: Methyltransferase/RNA helicase (MT/HEL) (129
            kDa protein)]
          Length = 1648

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 296  DPLEAPVENQRGNACVPPSRDACSYPRI 213
            DP+ A ++N+  N  +P  R AC  PRI
Sbjct: 1214 DPVPALIKNEAQNFLIPVLRTACERPRI 1241

>AMY3_WHEAT (P08117) Alpha-amylase AMY3 precursor (EC 3.2.1.1)|
           (1,4-alpha-D-glucan glucanohydrolase)
          Length = 413

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 251 HMHCLAGFLLEPPMDHLNSRPHRQLLGW 334
           H     GF   P +DHLN R  R+L  W
Sbjct: 160 HRDTGGGFDAAPDIDHLNPRVQRELSAW 187

>AROK_SYNEL (Q8DKH7) Shikimate kinase (EC 2.7.1.71) (SK)|
          Length = 183

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 168 VAAATGGGLPARPLQDSRI*AGISTWWHTCIASL 269
           +  ATGGG+   P+  S +  GI  W H  +A L
Sbjct: 81  LVVATGGGIVLNPMNWSYLHHGIVVWLHVPLAVL 114


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,378,096
Number of Sequences: 219361
Number of extensions: 509411
Number of successful extensions: 1362
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)