ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast35f04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_360624.1| Magnaporthe grisea 70-15 predicted protein (MG0... 38 2.7
2ref|XM_751491.1| Ustilago maydis 521 hypothetical protein (UM004... 38 2.7

>ref|XM_360624.1| Magnaporthe grisea 70-15 predicted protein (MG03167.4) partial mRNA
          Length = 1554

 Score = 38.2 bits (19), Expect = 2.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  caagctcctcagccatggc 46
           |||||||||||||||||||
Sbjct: 619 caagctcctcagccatggc 601



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>ref|XM_751491.1| Ustilago maydis 521 hypothetical protein (UM00437.1) partial mRNA
          Length = 3657

 Score = 38.2 bits (19), Expect = 2.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 28   caagctcctcagccatggc 46
            |||||||||||||||||||
Sbjct: 1631 caagctcctcagccatggc 1649


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 363,040
Number of Sequences: 3902068
Number of extensions: 363040
Number of successful extensions: 24867
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24865
Number of HSP's gapped (non-prelim): 2
length of query: 69
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 48
effective length of database: 17,151,101,840
effective search space: 823252888320
effective search space used: 823252888320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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