Clone Information

BLAST Search Result

Clone Name	bast35d04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ZN363_MOUSE (Q9CR50) RING finger and CHY zinc finger domain-cont...	45	6e-05
2	ZN363_HUMAN (Q96PM5) RING finger and CHY zinc finger domain-cont...	45	6e-05
3	TRPA_MAIZE (P42390) Indole-3-glycerol phosphate lyase, chloropla...	35	0.034
4	HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated...	32	0.29
5	CENPB_HUMAN (P07199) Major centromere autoantigen B (Centromere ...	32	0.38
6	NIFA_AZOBR (P30667) Nif-specific regulatory protein	32	0.38
7	ARI3A_HUMAN (Q99856) AT-rich interactive domain-containing prote...	31	0.64
8	TGT_PASMU (P57831) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)...	31	0.64
9	NHS_HUMAN (Q6T4R5) Nance-Horan syndrome protein (Congenital cata...	30	1.1
10	SOX9_PONPY (P61754) Transcription factor SOX-9	30	1.4
11	SOX9_PANTR (Q9BG89) Transcription factor SOX-9	30	1.4
12	SOX9_MACMU (P61753) Transcription factor SOX-9	30	1.4
13	SOX9_HUMAN (P48436) Transcription factor SOX-9	30	1.4
14	SOX9_CALJA (Q9BG91) Transcription factor SOX-9	30	1.4
15	TGT_MANSM (Q65S94) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)...	29	2.4
16	H6ST3_HUMAN (Q8IZP7) Heparan-sulfate 6-O-sulfotransferase 3 (EC ...	29	2.4
17	CHEB2_CAUCR (Q9AAK0) Chemotaxis response regulator protein-gluta...	29	2.4
18	FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-l...	29	3.2
19	FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	29	3.2
20	E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ET...	29	3.2
21	SYC_SYNPX (Q7U8C0) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cyst...	29	3.2
22	RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis prote...	28	4.2
23	VGLG_HHV2H (P13290) Glycoprotein G	28	5.4
24	NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Si...	28	5.4
25	EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear a...	28	5.4
26	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	28	5.4
27	MIG10_CAEEL (P34400) Abnormal cell migration protein 10	28	5.4
28	PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor t...	28	5.4
29	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	28	7.1
30	E2F4_HUMAN (Q16254) Transcription factor E2F4 (E2F-4)	28	7.1
31	VE7_HPV5B (P26559) Protein E7	28	7.1
32	SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysi...	28	7.1
33	SMCA4_HUMAN (P51532) Probable global transcription activator SNF...	28	7.1
34	ADRB1_HUMAN (P08588) Beta-1 adrenergic receptor (Beta-1 adrenoce...	28	7.1
35	Y3215_MYCBO (Q7TX22) UPF0182 protein Mb3215c	28	7.1
36	Y3193_MYCTU (O53339) UPF0182 protein Rv3193c/MT3285	28	7.1
37	P30_MYCPN (P75330) P30 adhesin (Cytadhesin P30) (30 kDa adhesin-...	28	7.1
38	Y2023_MYCBO (P64918) Hypothetical protein Mb2023	28	7.1
39	Y2000_MYCTU (P64917) Hypothetical protein Rv2000/MT2056	28	7.1
40	TRAH5_ECOLI (Q00189) Protein traH	27	9.3
41	Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 in...	27	9.3
42	CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor	27	9.3
43	WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7...	27	9.3
44	SHAN3_HUMAN (Q9BYB0) SH3 and multiple ankyrin repeat domains pro...	27	9.3
45	GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outg...	27	9.3
46	TGT_HAEIN (P44594) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)...	27	9.3
47	NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 p...	27	9.3
48	NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4...	27	9.3
49	WNK1_RAT (Q9JIH7) Serine/threonine-protein kinase WNK1 (EC 2.7.1...	27	9.3
50	LECT_SOLTU (Q9S8M0) Chitin-binding lectin 1 precursor (PL-I)	27	9.3
51	IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)	27	9.3
52	ZN687_MOUSE (Q9D2D7) Zinc finger protein 687	27	9.3
53	5HT6R_MOUSE (Q9R1C8) 5-hydroxytryptamine 6 receptor (5-HT-6) (Se...	27	9.3
54	ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoce...	27	9.3

>ZN363_MOUSE (Q9CR50) RING finger and CHY zinc finger domain-containing protein|
           1 (Zinc finger protein 363) (CH-rich-interacting match
           with PLAG1) (Androgen receptor N-terminal-interacting
           protein)
          Length = 261

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +1

Query: 169 GQMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHC 273
           G  +L     GCEHY R C ++APCC +++ CR C
Sbjct: 9   GVRNLAQGPRGCEHYDRACLLKAPCCDKLYTCRLC 43

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>ZN363_HUMAN (Q96PM5) RING finger and CHY zinc finger domain-containing protein|
           1 (Zinc finger protein 363) (CH-rich-interacting match
           with PLAG1) (Androgen receptor N-terminal-interacting
           protein)
          Length = 261

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +1

Query: 193 QHGCEHYTRRCRIRAPCCGEVFGCRHC 273
           Q GCEHY R C ++APCC +++ CR C
Sbjct: 17  QRGCEHYDRGCLLKAPCCDKLYTCRLC 43

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>TRPA_MAIZE (P42390) Indole-3-glycerol phosphate lyase, chloroplast precursor|
           (EC 4.1.2.-) (Indole synthase) (Tryptophan synthase
           alpha chain) (EC 4.2.1.20) (Benzoxazineless 1)
          Length = 347

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
 Frame = -2

Query: 232 VSCTSSCNARSRAA---LPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRESLAAL 77
           V  T++  AR+ AA   +P  P   P+PA VPP+  AA P ER+   V +++AAL
Sbjct: 44  VVVTTTTTARAAAAAVTVPAAPPQAPAPAPVPPKQAAA-PAERRSRPVSDTMAAL 97

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>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2 (Brain cyclic nucleotide
           gated channel 2) (BCNG-2)
          Length = 889

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = -2

Query: 193 ALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRESL 86
           A PP P   P+P   PPR +A PPE   E G R  L
Sbjct: 42  APPPGPG--PAPPQHPPRAEALPPEAADEGGPRGRL 75

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>CENPB_HUMAN (P07199) Major centromere autoantigen B (Centromere protein B)|
           (CENP-B)
          Length = 599

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -2

Query: 232 VSCTSSCNARSRAALPPNPSVRPSPAFVPPRG 137
           VSC+    AR+R A P  P+   SPA VP  G
Sbjct: 133 VSCSGVARARARNAAPRTPAAPASPAAVPSEG 164

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>NIFA_AZOBR (P30667) Nif-specific regulatory protein|
          Length = 625

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -2

Query: 217 SCNARSRAALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRESL 86
           +C   SRA LPP  +  PSPA  PP     P +E +   +R+ L
Sbjct: 544 ACPCPSRAPLPPQ-APPPSPAAAPPPAAEVPLDEPESGSLRDRL 586

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>ARI3A_HUMAN (Q99856) AT-rich interactive domain-containing protein 3A (ARID|
           domain-containing protein 3A) (B-cell regulator of IgH
           transcription) (Bright) (E2F-binding protein 1)
          Length = 593

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = -2

Query: 202 SRAALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRESLAALXXXXXXXXXPAGI 38
           +R  LPP+P     PA  P R  AAP E+R+    R   A +          AG+
Sbjct: 23  ARQQLPPDP-----PAAPPGRARAAPDEDREPESARMQRAQMAALAAMRAAAAGL 72

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>TGT_PASMU (P57831) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)|
           (tRNA-guanine transglycosylase) (Guanine insertion
           enzyme)
          Length = 385

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 148 ARKRETAGQMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCR 267
           A+ RE    +D   + + C+HYT+        CGE+ G R
Sbjct: 293 AKYREDTSPLDPECDCYTCKHYTKAYLYHLDKCGEILGAR 332

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>NHS_HUMAN (Q6T4R5) Nance-Horan syndrome protein (Congenital cataracts and|
           dental anomalies protein)
          Length = 1630

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -2

Query: 196 AALPPNPSVRPSPA--FVPPRGDAAPPEERKEAGVRESLAALXXXXXXXXXPA 44
           + LPP P   P+PA    PP G+A+   E   AG+ E+  A           A
Sbjct: 65  SGLPPPPPPLPAPADQTQPPHGEASVAGEESTAGIPEAAPAAGEASSAAAAAA 117

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>SOX9_PONPY (P61754) Transcription factor SOX-9|
          Length = 509

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 187 PPNPSVRPSPAFVPPRGDAAPPEE 116
           PP P   P P   PP+  AAPP++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQ 376

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>SOX9_PANTR (Q9BG89) Transcription factor SOX-9|
          Length = 509

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 187 PPNPSVRPSPAFVPPRGDAAPPEE 116
           PP P   P P   PP+  AAPP++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQ 376

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>SOX9_MACMU (P61753) Transcription factor SOX-9|
          Length = 509

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 187 PPNPSVRPSPAFVPPRGDAAPPEE 116
           PP P   P P   PP+  AAPP++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQ 376

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>SOX9_HUMAN (P48436) Transcription factor SOX-9|
          Length = 509

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 187 PPNPSVRPSPAFVPPRGDAAPPEE 116
           PP P   P P   PP+  AAPP++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQ 376

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>SOX9_CALJA (Q9BG91) Transcription factor SOX-9|
          Length = 509

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 187 PPNPSVRPSPAFVPPRGDAAPPEE 116
           PP P   P P   PP+  AAPP++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQ 376

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>TGT_MANSM (Q65S94) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)|
           (tRNA-guanine transglycosylase) (Guanine insertion
           enzyme)
          Length = 379

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 148 ARKRETAGQMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCR 267
           A+ ++    +D   + + C+HYT+        CGE+ G R
Sbjct: 293 AKYKDDTSPLDPHCDCYTCQHYTKSYLYHLDKCGEILGAR 332

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>H6ST3_HUMAN (Q8IZP7) Heparan-sulfate 6-O-sulfotransferase 3 (EC 2.8.2.-)|
           (HS6ST-3)
          Length = 471

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 25/68 (36%)
 Frame = -2

Query: 229 SCTSSCN------------------ARSRAALPPN-----PSVRPSPAFVP--PRGDAAP 125
           SCTSSC                      RA  PP      P + P P   P  PRG AAP
Sbjct: 29  SCTSSCTNLGEQPRAGEAGPPAVPGPARRAQAPPEEWERRPQLPPPPRGPPEGPRGAAAP 88

Query: 124 PEERKEAG 101
            EE +E G
Sbjct: 89  EEEDEEPG 96

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>CHEB2_CAUCR (Q9AAK0) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 2 operon (EC 3.1.1.61)
          Length = 347

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -2

Query: 202 SRAALPPNPSVRPSPAFVPPRGDAAPPEE 116
           +RAA P  P   P P   PP  D A P E
Sbjct: 129 ARAARPAPPQAAPRPTLAPPSSDPAGPIE 157

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>FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 536

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 190 LPPNPSVRPSPAFVPPRGDAAPP 122
           LPP P+V  +P  +PP G   PP
Sbjct: 315 LPPPPTVSTAPPLIPPPGFPPPP 337

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>FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
           (Factor interacting with PAP) (hFip1) (Rearranged in
           hypereosinophilia)
          Length = 594

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 190 LPPNPSVRPSPAFVPPRGDAAPP 122
           LPP P+V  +P  +PP G   PP
Sbjct: 375 LPPPPTVSTAPPLIPPPGFPPPP 397

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>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related|
           protein E74B)
          Length = 883

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/68 (25%), Positives = 26/68 (38%)
 Frame = -2

Query: 304 STSSEFLAWLXXXXXXXXXXXXXPVSCTSSCNARSRAALPPNPSVRPSPAFVPPRGDAAP 125
           S ++  L  +              +S +SS ++ S ++  P P   P     PP   AAP
Sbjct: 17  SQAAASLVNVSSSSSSSSSSSSSSLSLSSSSSSSSLSSATPTPVASPVTPTSPPPAAAAP 76

Query: 124 PEERKEAG 101
            E    AG
Sbjct: 77  AEASPPAG 84

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>SYC_SYNPX (Q7U8C0) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 493

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 363 AERADDLLISWRGMSAGRGRPPRANS*LGWAMPAA 259
           AE  +     W+G++A  G   R +  LGW  PAA
Sbjct: 311 AEALEAAATGWKGLNAALGLGERYSDQLGWPSPAA 345

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>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1|
           (Rab3-interacting molecule 1) (RIM 1)
          Length = 1615

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -2

Query: 232 VSCTSSCNARSRAALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRE 92
           VS   S  AR+ AA PP     P P   P  G A PPE R    +R+
Sbjct: 442 VSPPESPRARAAAAQPPTEHGPPPPR--PAPGPAEPPEPRVPEPLRK 486

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>VGLG_HHV2H (P13290) Glycoprotein G|
          Length = 699

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
 Frame = -2

Query: 346 PADFVAGDVGRSRTSTSSEFLAWLXXXXXXXXXXXXXPVSCTSSC-NARSRAALPP-NPS 173
           P     G VG S   T+   L                 V+ T++    R  A  PP +P 
Sbjct: 477 PGPATPGPVGASAAPTADSPLTASPPATAPGPSAANVSVAATTATPGTRGTARTPPTDPK 536

Query: 172 VRP-SPAFVPPRGDAAPPEERK 110
             P  PA  PP   A PP E +
Sbjct: 537 THPHGPADAPPGSPAPPPPEHR 558

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>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing|
           mediator of retinoic acid and thyroid hormone receptor)
           (SMRT) (SMRTe) (Thyroid-,
           retinoic-acid-receptor-associated corepressor) (T3
           receptor-associating factor) (TRAC) (CTG repeat p
          Length = 2517

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = -2

Query: 202 SRAALPPNPSVR----PSPAFVPPRGDAAPPEERKEAGVRESLAA 80
           SRA + P P+      P+P   PP   A PP   KE    E+ AA
Sbjct: 790 SRAPIEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAA 834

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>EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)|
           (EBNA-2)
          Length = 487

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 187 PPNPSVRPSPAFVPPRGDAAPPEERKEAGVRE 92
           PP P   P P   PP     PP +R++A  +E
Sbjct: 78  PPPPPPPPPPPSPPPPPPPPPPPQRRDAWTQE 109

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 205 RSRAALPPNPSVRPSP-AFVPPRGDAAPPEERK 110
           RSR+   P+P  RPSP    PPR    PP  R+
Sbjct: 304 RSRSRRRPSPRRRPSPRRRTPPRRMPPPPRHRR 336

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>MIG10_CAEEL (P34400) Abnormal cell migration protein 10|
          Length = 779

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
 Frame = -2

Query: 229 SCTSSCNARSR-AALPPNPSVR-----PSPAFVPPRGDAAPPEERKEAGVRESL 86
           S T S N R R +A   N S R     PSP  V PR      EE K   +R++L
Sbjct: 259 SSTESSNNRCRNSAFSSNDSCRDSLNTPSPTQVSPRNGELNAEEAKAQKIRQAL 312

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>PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor type 23 (EC|
            3.1.3.48) (His-domain-containing protein tyrosine
            phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14)
            (PTP-TD14)
          Length = 1636

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -2

Query: 190  LPPNPSVRPSPAFVPPRGDAA--PPEERKEAGVRESLAA 80
            L P+P+  P P  VPPR  AA  PP  R+ A   + L++
Sbjct: 1084 LVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSS 1122

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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 193 ALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRESLA 83
           A PP PS  P P++ PP G +AP   +  A + E ++
Sbjct: 744 APPPYPSYPPCPSY-PPPGQSAPDAGKPPAQLDEGVS 779

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>E2F4_HUMAN (Q16254) Transcription factor E2F4 (E2F-4)|
          Length = 413

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -2

Query: 229 SCTSSCNARSRAALPPNPSVRPSPAFVPPRGDAAPPEERKE 107
           S +SS N+ S ++  PNPS    P    P G    P+E  E
Sbjct: 314 SSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSE 354

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>VE7_HPV5B (P26559) Protein E7|
          Length = 103

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 226 RIRAPCCGEVFGCRHCPTKLRI 291
           ++ APC     GCRHC  KLRI
Sbjct: 51  KVIAPC-----GCRHCEVKLRI 67

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>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific|
           SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase
           complex subunit SET1) (SET-domain-containing protein 1A)
          Length = 1707

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 190 LPPNPSVRPSPAFVPPRGDAAPPEERKEAG 101
           LPP PS      + PP  +A PPE  +  G
Sbjct: 413 LPPEPSRPTDQDYRPPASEAPPPEPPEPGG 442

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>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC|
           3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta)
           (BRG-1 protein) (Mitotic growth and transcription
           activator) (Brahma protein homolog 1) (SWI/SNF-related
           matrix-associated actin
          Length = 1647

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -2

Query: 190 LPPNPSVRPSPA--FVPPRGDAAPPEERKEAG 101
           +PP P+ RPSPA   VPP      P + +  G
Sbjct: 303 IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334

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>ADRB1_HUMAN (P08588) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 477

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -2

Query: 217 SCNAR--SRAALPPNPSVRPSPAFVPPRGDAAP 125
           SC  R     A PP+PS  P PA  PP G   P
Sbjct: 260 SCERRFLGGPARPPSPSPSPVPAPAPPPGPPRP 292

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>Y3215_MYCBO (Q7TX22) UPF0182 protein Mb3215c|
          Length = 992

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -2

Query: 223  TSSCNARSRAALPPNPSVRPSPAF---VPPRGDAAPP 122
            T++  A + AA+PP+P+  P P      PP   AAPP
Sbjct: 900  TATGIAPTEAAVPPSPAANPPPPASGPQPPPVTAAPP 936

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>Y3193_MYCTU (O53339) UPF0182 protein Rv3193c/MT3285|
          Length = 992

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -2

Query: 223  TSSCNARSRAALPPNPSVRPSPAF---VPPRGDAAPP 122
            T++  A + AA+PP+P+  P P      PP   AAPP
Sbjct: 900  TATGIAPTEAAVPPSPAANPPPPASGPQPPPVTAAPP 936

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>P30_MYCPN (P75330) P30 adhesin (Cytadhesin P30) (30 kDa adhesin-related|
           protein)
          Length = 274

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 199 RAALPPNPSVRPSPAFVPPRGDAAPP 122
           R  +PP+P + P P F P  G A  P
Sbjct: 230 RPGMPPHPGMAPRPGFPPQPGMAPRP 255



 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 199 RAALPPNPSVRPSPAFVPPRGDAAPP 122
           R  +PP+P + P P F P  G A  P
Sbjct: 206 RPGMPPHPGMAPRPGFPPQPGMAPRP 231



 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 199 RAALPPNPSVRPSPAFVPPRGDAAPP 122
           R  +PP+P + P P F P  G A  P
Sbjct: 182 RPGMPPHPGMAPRPGFPPQPGMAPRP 207

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>Y2023_MYCBO (P64918) Hypothetical protein Mb2023|
          Length = 537

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 178 PSVRPSPAFVPPRGDAAPPEERKEAGVRE 92
           PS+RP+P  V P  D   P E  + G R+
Sbjct: 219 PSMRPAPYSVAPGVDCVAPNELPKLGTRD 247

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>Y2000_MYCTU (P64917) Hypothetical protein Rv2000/MT2056|
          Length = 537

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 178 PSVRPSPAFVPPRGDAAPPEERKEAGVRE 92
           PS+RP+P  V P  D   P E  + G R+
Sbjct: 219 PSMRPAPYSVAPGVDCVAPNELPKLGTRD 247

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>TRAH5_ECOLI (Q00189) Protein traH|
          Length = 130

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 205 RSRAALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVR 95
           ++ A  PP  +  P+PAF PP    +P  +  E   R
Sbjct: 39  QATAGQPPAEATAPTPAFTPPPSTGSPTLDALEENRR 75

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>Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 intergenic|
           region
          Length = 224

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 190 LPPNPSVRPSPAFVPPRGDAAPPEERKEAG 101
           +PP P+  P P+ +PP    +PP      G
Sbjct: 111 IPPTPTPSPPPSPIPPTPTPSPPPSPSPLG 140

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>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 190 LPPNPSVRPSPAFVPPRGDAAPPEERKEAGVR 95
           +P NP  R +P F  P G    P E+  AG R
Sbjct: 477 VPGNPGERGAPGFRGPAGPNGAPGEKGPAGER 508

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>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)|
           (Protein kinase with no lysine 1) (Protein kinase,
           lysine-deficient 1)
          Length = 2377

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -2

Query: 232 VSCTSSCNARSRAALP---PNPSVRPSPAFVPPRGDAAPPEERKEAGVRESLAA 80
           V C S+  A     LP   P PSV   PA VP    +APPE  +E  +  ++A+
Sbjct: 82  VICDSNATALELPGLPLSIPQPSV---PAVVP---QSAPPEPHREETLTATVAS 129

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>SHAN3_HUMAN (Q9BYB0) SH3 and multiple ankyrin repeat domains protein 3 (Shank3)|
           (Proline-rich synapse-associated protein 2) (ProSAP2)
           (Fragment)
          Length = 797

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 184 PNPSVRPSPAFVPPRGDAAP-PEERKEAGVRES 89
           P+P+  PSPA   P  +  P PE   ++GV E+
Sbjct: 394 PSPTTVPSPASGKPSSEPPPAPESAADSGVEEA 426

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>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 1008

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 196 AALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRESLAA 80
           AA PP P  R +    P    +APP  R++AG +    A
Sbjct: 782 AAPPPGPRTRDNFTKAPSWEASAPPPPREDAGTQAGAQA 820

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>TGT_HAEIN (P44594) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)|
           (tRNA-guanine transglycosylase) (Guanine insertion
           enzyme)
          Length = 382

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 148 ARKRETAGQMDLGAEQHGCEHYTRRCRIRAPCCGEVFGCR 267
           A+ R+    +D   + + C++YT+        CGE+ G R
Sbjct: 293 AKYRDDTSPLDPECDCYTCKNYTKAYLYHLDKCGEILGAR 332

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>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -2

Query: 229  SCTSSCNARSRAALPPNPSVRPSPAFV---PPRGDAA-PPEERKEA 104
            SC S+  A   A  PP P   PSPA+    PP G A   P ER  A
Sbjct: 892  SCCSAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAA 937

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>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -2

Query: 229  SCTSSCNARSRAALPPNPSVRPSPAFV---PPRGDAA-PPEERKEA 104
            SC S+  A   A  PP P   PSPA+    PP G A   P ER  A
Sbjct: 892  SCCSAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAA 937

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>WNK1_RAT (Q9JIH7) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)|
           (Protein kinase with no lysine 1) (Protein kinase,
           lysine-deficient 1)
          Length = 2126

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -2

Query: 232 VSCTSSCNARSRAALP---PNPSVRPSPAFVPPRGDAAPPEERKEAGVRESLAA 80
           V C S+  A     LP   P PSV   PA VP    +APPE  +E  +  ++A+
Sbjct: 82  VICDSNATALELPGLPLSIPQPSV---PAVVP---QSAPPEPHREETLTATVAS 129

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>LECT_SOLTU (Q9S8M0) Chitin-binding lectin 1 precursor (PL-I)|
          Length = 323

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = -2

Query: 229 SCTSSCNARSRAALPPNPSV-RPSPAFVPPRGDAAPP 122
           +C S C   S    PP PS   PSP   PP     PP
Sbjct: 142 NCQSQCKLPSPPPPPPPPSPPPPSPPSPPPPSPPPPP 178

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>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)|
          Length = 1338

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 190  LPPNPSVRPSPAFVPPRGDAAPPE 119
            LPP PS  PS +  PP    AP E
Sbjct: 1017 LPPRPSASPSSSLQPPPPPPAPGE 1040

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>ZN687_MOUSE (Q9D2D7) Zinc finger protein 687|
          Length = 1237

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 193 QHGCEHYTRRCRIRAPCCGEVFG 261
           +  C H++RR   R P C  VFG
Sbjct: 752 REACLHFSRRVGYRCPSCAVVFG 774

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>5HT6R_MOUSE (Q9R1C8) 5-hydroxytryptamine 6 receptor (5-HT-6) (Serotonin|
           receptor 6)
          Length = 440

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = +1

Query: 247 GEVFGCRHCPTKLRIR----SRWTSSTGRHPPPRNQQVI 351
           G    C HCP + R      S WTS +G  P    QQV+
Sbjct: 334 GRFVPCVHCPPEHRASPASPSMWTSHSGARPGLSLQQVL 372

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>ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 480

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -2

Query: 217 SCNAR--SRAALPPNPSVRPSPAFVPPRGDAAPPEERKEAGVRESLAAL 77
           SC  R     A PP+PS  PSP+ VP    A PP   + A    + A L
Sbjct: 260 SCERRFLGGPARPPSPSPSPSPSPVP----APPPGPPRPAAAAATTAPL 304


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,131,768
Number of Sequences: 219361
Number of extensions: 712506
Number of successful extensions: 3942
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 3167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3874
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result