ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast35a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479019.1| Oryza sativa (japonica cultivar-group), mRNA 248 1e-62
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 248 1e-62
3dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic D... 248 1e-62
4dbj|AK066942.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 1e-62
5ref|XM_468774.1| Oryza sativa (japonica cultivar-group), mRNA 218 1e-53
6ref|XM_506917.1| PREDICTED Oryza sativa (japonica cultivar-group... 218 1e-53
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 218 1e-53
8gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genom... 218 1e-53
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
10dbj|AK069737.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
11gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 1.6
12ref|XM_323796.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.6
13ref|XM_952428.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.6
14gb|AC158949.6| Mus musculus chromosome 7, clone RP23-305I23, com... 42 1.6
15ref|XM_504466.1| Yarrowia lipolytica CLIB122, YALI0E27412g predi... 42 1.6
16emb|BX908808.1| Neurospora crassa DNA linkage group IV Cosmid co... 42 1.6
17emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome... 42 1.6
18emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 1.6
19gb|AC104165.2| Homo sapiens chromosome 3 clone RP11-681O4, compl... 42 1.6
20gb|AC108443.18| Mus musculus chromosome 7, clone RP23-13J9, comp... 42 1.6
21gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.6
22emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 42 1.6
23gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 40 6.3
24ref|NM_111567.2| Arabidopsis thaliana unknown protein AT3G06870 ... 40 6.3
25gb|BC081207.1| Xenopus laevis hypothetical protein LOC446942, mR... 40 6.3
26ref|NM_007993.1| Mus musculus fibrillin 1 (Fbn1), mRNA 40 6.3
27gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, com... 40 6.3
28gb|BC049930.1| Mus musculus cDNA clone IMAGE:5252102, partial cds 40 6.3
29gb|AC016827.7|ATAC016827 Arabidopsis thaliana chromosome III BAC... 40 6.3
30emb|AL157938.22| Human DNA sequence from clone RP11-544A12 on ch... 40 6.3
31gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthe... 40 6.3
32ref|NM_075132.2| Caenorhabditis elegans abnormal embryonic PARti... 40 6.3
33emb|BX832404.1|CNS09ZNW Arabidopsis thaliana Full-length cDNA Co... 40 6.3
34dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.3
35gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 6.3
36gb|AF160189.1|AF160189 Caenorhabditis elegans putative serine-th... 40 6.3
37emb|AL132863.1|CEY37H2A Caenorhabditis elegans YAC Y37H2A, compl... 40 6.3
38gb|AC171502.2| Mus musculus BAC clone RP23-242G4 from chromosome... 40 6.3
39gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 40 6.3
40gb|U22493.1|MMU22493 Mus musculus fibrillin-1 (Fbn1) mRNA, compl... 40 6.3
41emb|AL731826.12| Mouse DNA sequence from clone RP23-123O12 on ch... 40 6.3 
>ref|XM_479019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1416

 Score =  248 bits (125), Expect = 1e-62
 Identities = 200/224 (89%), Gaps = 1/224 (0%)
 Strand = Plus / Plus

                                                                       
Query: 237 aaatggtgctggtggtgaagcagcaccgctgcacgcactcggcgtcctgctcctgcacca 296
           |||||||||||||||||||||||||||| |||| ||||||||||  ||||   |||| ||
Sbjct: 302 aaatggtgctggtggtgaagcagcaccggtgcatgcactcggcgagctgcgtttgcatca 361

                                                                       
Query: 297 agggccacctcagcgaggacgcgctgttcctcgtcttccgccacatgaactggaacccca 356
           |||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 362 agggacacctcagcgaggacgcgctgttcctggtctttcgtcacatgaactggaacccca 421

                                                                       
Query: 357 ggctgatcgccaacctctcctgcgtctngcagtggttcgacgaggtcgccaagcaggtgc 416
           |||||||||||   ||||| ||||| |   ||||||||||||||||||| ||||||||||
Sbjct: 422 ggctgatcgccgtgctctcgtgcgtgtgcaagtggttcgacgaggtcgcgaagcaggtgc 481

                                                       
Query: 417 tgtggaaggagttctgccatgccagggcgcc-aagatgatgctg 459
           | ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 482 tctggaaggagttctgccacgccagggcgccgaagatgatgctg 525
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  248 bits (125), Expect = 1e-62
 Identities = 200/224 (89%), Gaps = 1/224 (0%)
 Strand = Plus / Plus

                                                                            
Query: 237      aaatggtgctggtggtgaagcagcaccgctgcacgcactcggcgtcctgctcctgcacca 296
                |||||||||||||||||||||||||||| |||| ||||||||||  ||||   |||| ||
Sbjct: 24343281 aaatggtgctggtggtgaagcagcaccggtgcatgcactcggcgagctgcgtttgcatca 24343340

                                                                            
Query: 297      agggccacctcagcgaggacgcgctgttcctcgtcttccgccacatgaactggaacccca 356
                |||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 24343341 agggacacctcagcgaggacgcgctgttcctggtctttcgtcacatgaactggaacccca 24343400

                                                                            
Query: 357      ggctgatcgccaacctctcctgcgtctngcagtggttcgacgaggtcgccaagcaggtgc 416
                |||||||||||   ||||| ||||| |   ||||||||||||||||||| ||||||||||
Sbjct: 24343401 ggctgatcgccgtgctctcgtgcgtgtgcaagtggttcgacgaggtcgcgaagcaggtgc 24343460

                                                            
Query: 417      tgtggaaggagttctgccatgccagggcgcc-aagatgatgctg 459
                | ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 24343461 tctggaaggagttctgccacgccagggcgccgaagatgatgctg 24343504
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>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1579_C03
          Length = 122851

 Score =  248 bits (125), Expect = 1e-62
 Identities = 200/224 (89%), Gaps = 1/224 (0%)
 Strand = Plus / Plus

                                                                         
Query: 237   aaatggtgctggtggtgaagcagcaccgctgcacgcactcggcgtcctgctcctgcacca 296
             |||||||||||||||||||||||||||| |||| ||||||||||  ||||   |||| ||
Sbjct: 76474 aaatggtgctggtggtgaagcagcaccggtgcatgcactcggcgagctgcgtttgcatca 76533

                                                                         
Query: 297   agggccacctcagcgaggacgcgctgttcctcgtcttccgccacatgaactggaacccca 356
             |||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 76534 agggacacctcagcgaggacgcgctgttcctggtctttcgtcacatgaactggaacccca 76593

                                                                         
Query: 357   ggctgatcgccaacctctcctgcgtctngcagtggttcgacgaggtcgccaagcaggtgc 416
             |||||||||||   ||||| ||||| |   ||||||||||||||||||| ||||||||||
Sbjct: 76594 ggctgatcgccgtgctctcgtgcgtgtgcaagtggttcgacgaggtcgcgaagcaggtgc 76653

                                                         
Query: 417   tgtggaaggagttctgccatgccagggcgcc-aagatgatgctg 459
             | ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 76654 tctggaaggagttctgccacgccagggcgccgaagatgatgctg 76697
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>dbj|AK066942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088D22, full
           insert sequence
          Length = 1416

 Score =  248 bits (125), Expect = 1e-62
 Identities = 200/224 (89%), Gaps = 1/224 (0%)
 Strand = Plus / Plus

                                                                       
Query: 237 aaatggtgctggtggtgaagcagcaccgctgcacgcactcggcgtcctgctcctgcacca 296
           |||||||||||||||||||||||||||| |||| ||||||||||  ||||   |||| ||
Sbjct: 302 aaatggtgctggtggtgaagcagcaccggtgcatgcactcggcgagctgcgtttgcatca 361

                                                                       
Query: 297 agggccacctcagcgaggacgcgctgttcctcgtcttccgccacatgaactggaacccca 356
           |||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 362 agggacacctcagcgaggacgcgctgttcctggtctttcgtcacatgaactggaacccca 421

                                                                       
Query: 357 ggctgatcgccaacctctcctgcgtctngcagtggttcgacgaggtcgccaagcaggtgc 416
           |||||||||||   ||||| ||||| |   ||||||||||||||||||| ||||||||||
Sbjct: 422 ggctgatcgccgtgctctcgtgcgtgtgcgagtggttcgacgaggtcgcgaagcaggtgc 481

                                                       
Query: 417 tgtggaaggagttctgccatgccagggcgcc-aagatgatgctg 459
           | ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 482 tctggaaggagttctgccacgccagggcgccgaagatgatgctg 525
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>ref|XM_468774.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1089

 Score =  218 bits (110), Expect = 1e-53
 Identities = 184/209 (88%)
 Strand = Plus / Plus

                                                                       
Query: 239 atggtgctggtggtgaagcagcaccgctgcacgcactcggcgtcctgctcctgcaccaag 298
           ||||||||||||||||||||| |||||||||||||||| |||  ||||  ||||  ||||
Sbjct: 332 atggtgctggtggtgaagcagtaccgctgcacgcactccgcgagctgcctctgcctcaag 391

                                                                       
Query: 299 ggccacctcagcgaggacgcgctgttcctcgtcttccgccacatgaactggaaccccagg 358
           || ||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 392 gggcacatcagcgaggacgcactgttcctcgtcttccgccacatgaactggaacccgagg 451

                                                                       
Query: 359 ctgatcgccaacctctcctgcgtctngcagtggttcgacgaggtcgccaagcaggtgctg 418
            |||||||   | ||||||||||||   |||||||||||||  |||||||||  ||||||
Sbjct: 452 atgatcgcgctcttctcctgcgtctccaagtggttcgacgacatcgccaagcgcgtgctg 511

                                        
Query: 419 tggaaggagttctgccatgccagggcgcc 447
           ||||||||||||||||| |||||||||||
Sbjct: 512 tggaaggagttctgccacgccagggcgcc 540
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>ref|XM_506917.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0083F15.24
           mRNA
          Length = 1185

 Score =  218 bits (110), Expect = 1e-53
 Identities = 184/209 (88%)
 Strand = Plus / Plus

                                                                       
Query: 239 atggtgctggtggtgaagcagcaccgctgcacgcactcggcgtcctgctcctgcaccaag 298
           ||||||||||||||||||||| |||||||||||||||| |||  ||||  ||||  ||||
Sbjct: 332 atggtgctggtggtgaagcagtaccgctgcacgcactccgcgagctgcctctgcctcaag 391

                                                                       
Query: 299 ggccacctcagcgaggacgcgctgttcctcgtcttccgccacatgaactggaaccccagg 358
           || ||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 392 gggcacatcagcgaggacgcactgttcctcgtcttccgccacatgaactggaacccgagg 451

                                                                       
Query: 359 ctgatcgccaacctctcctgcgtctngcagtggttcgacgaggtcgccaagcaggtgctg 418
            |||||||   | ||||||||||||   |||||||||||||  |||||||||  ||||||
Sbjct: 452 atgatcgcgctcttctcctgcgtctccaagtggttcgacgacatcgccaagcgcgtgctg 511

                                        
Query: 419 tggaaggagttctgccatgccagggcgcc 447
           ||||||||||||||||| |||||||||||
Sbjct: 512 tggaaggagttctgccacgccagggcgcc 540
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  218 bits (110), Expect = 1e-53
 Identities = 184/209 (88%)
 Strand = Plus / Minus

                                                                            
Query: 239      atggtgctggtggtgaagcagcaccgctgcacgcactcggcgtcctgctcctgcaccaag 298
                ||||||||||||||||||||| |||||||||||||||| |||  ||||  ||||  ||||
Sbjct: 17655930 atggtgctggtggtgaagcagtaccgctgcacgcactccgcgagctgcctctgcctcaag 17655871

                                                                            
Query: 299      ggccacctcagcgaggacgcgctgttcctcgtcttccgccacatgaactggaaccccagg 358
                || ||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 17655870 gggcacatcagcgaggacgcactgttcctcgtcttccgccacatgaactggaacccgagg 17655811

                                                                            
Query: 359      ctgatcgccaacctctcctgcgtctngcagtggttcgacgaggtcgccaagcaggtgctg 418
                 |||||||   | ||||||||||||   |||||||||||||  |||||||||  ||||||
Sbjct: 17655810 atgatcgcgctcttctcctgcgtctccaagtggttcgacgacatcgccaagcgcgtgctg 17655751

                                             
Query: 419      tggaaggagttctgccatgccagggcgcc 447
                ||||||||||||||||| |||||||||||
Sbjct: 17655750 tggaaggagttctgccacgccagggcgcc 17655722
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>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete
              sequence
          Length = 136916

 Score =  218 bits (110), Expect = 1e-53
 Identities = 184/209 (88%)
 Strand = Plus / Plus

                                                                          
Query: 239    atggtgctggtggtgaagcagcaccgctgcacgcactcggcgtcctgctcctgcaccaag 298
              ||||||||||||||||||||| |||||||||||||||| |||  ||||  ||||  ||||
Sbjct: 128077 atggtgctggtggtgaagcagtaccgctgcacgcactccgcgagctgcctctgcctcaag 128136

                                                                          
Query: 299    ggccacctcagcgaggacgcgctgttcctcgtcttccgccacatgaactggaaccccagg 358
              || ||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 128137 gggcacatcagcgaggacgcactgttcctcgtcttccgccacatgaactggaacccgagg 128196

                                                                          
Query: 359    ctgatcgccaacctctcctgcgtctngcagtggttcgacgaggtcgccaagcaggtgctg 418
               |||||||   | ||||||||||||   |||||||||||||  |||||||||  ||||||
Sbjct: 128197 atgatcgcgctcttctcctgcgtctccaagtggttcgacgacatcgccaagcgcgtgctg 128256

                                           
Query: 419    tggaaggagttctgccatgccagggcgcc 447
              ||||||||||||||||| |||||||||||
Sbjct: 128257 tggaaggagttctgccacgccagggcgcc 128285
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  218 bits (110), Expect = 1e-53
 Identities = 184/209 (88%)
 Strand = Plus / Minus

                                                                            
Query: 239      atggtgctggtggtgaagcagcaccgctgcacgcactcggcgtcctgctcctgcaccaag 298
                ||||||||||||||||||||| |||||||||||||||| |||  ||||  ||||  ||||
Sbjct: 17649471 atggtgctggtggtgaagcagtaccgctgcacgcactccgcgagctgcctctgcctcaag 17649412

                                                                            
Query: 299      ggccacctcagcgaggacgcgctgttcctcgtcttccgccacatgaactggaaccccagg 358
                || ||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 17649411 gggcacatcagcgaggacgcactgttcctcgtcttccgccacatgaactggaacccgagg 17649352

                                                                            
Query: 359      ctgatcgccaacctctcctgcgtctngcagtggttcgacgaggtcgccaagcaggtgctg 418
                 |||||||   | ||||||||||||   |||||||||||||  |||||||||  ||||||
Sbjct: 17649351 atgatcgcgctcttctcctgcgtctccaagtggttcgacgacatcgccaagcgcgtgctg 17649292

                                             
Query: 419      tggaaggagttctgccatgccagggcgcc 447
                ||||||||||||||||| |||||||||||
Sbjct: 17649291 tggaaggagttctgccacgccagggcgcc 17649263
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>dbj|AK069737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030O19, full
           insert sequence
          Length = 1424

 Score =  218 bits (110), Expect = 1e-53
 Identities = 184/209 (88%)
 Strand = Plus / Plus

                                                                       
Query: 239 atggtgctggtggtgaagcagcaccgctgcacgcactcggcgtcctgctcctgcaccaag 298
           ||||||||||||||||||||| |||||||||||||||| |||  ||||  ||||  ||||
Sbjct: 353 atggtgctggtggtgaagcagtaccgctgcacgcactccgcgagctgcctctgcctcaag 412

                                                                       
Query: 299 ggccacctcagcgaggacgcgctgttcctcgtcttccgccacatgaactggaaccccagg 358
           || ||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 413 gggcacatcagcgaggacgcactgttcctcgtcttccgccacatgaactggaacccgagg 472

                                                                       
Query: 359 ctgatcgccaacctctcctgcgtctngcagtggttcgacgaggtcgccaagcaggtgctg 418
            |||||||   | ||||||||||||   |||||||||||||  |||||||||  ||||||
Sbjct: 473 atgatcgcgctcttctcctgcgtctccaagtggttcgacgacatcgccaagcgcgtgctg 532

                                        
Query: 419 tggaaggagttctgccatgccagggcgcc 447
           ||||||||||||||||| |||||||||||
Sbjct: 533 tggaaggagttctgccacgccagggcgcc 561
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 394     cgacgaggtcgccaagcaggtgctg 418
               ||||||||||||||||| |||||||
Sbjct: 3176670 cgacgaggtcgccaagctggtgctg 3176646
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>ref|XM_323796.1| Neurospora crassa OR74A hypothetical protein (NCU04444.1) partial
            mRNA
          Length = 5544

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  tcgccaacctctcctgcgtct 383
            |||||||||||||||||||||
Sbjct: 5470 tcgccaacctctcctgcgtct 5450
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>ref|XM_952428.1| Neurospora crassa OR74A hypothetical protein (NCU04444.1) partial
            mRNA
          Length = 5544

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  tcgccaacctctcctgcgtct 383
            |||||||||||||||||||||
Sbjct: 5470 tcgccaacctctcctgcgtct 5450
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>gb|AC158949.6| Mus musculus chromosome 7, clone RP23-305I23, complete sequence
          Length = 159999

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 419    tggaaggagttctgccatgcc 439
              |||||||||||||||||||||
Sbjct: 131523 tggaaggagttctgccatgcc 131543
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>ref|XM_504466.1| Yarrowia lipolytica CLIB122, YALI0E27412g predicted mRNA
          Length = 600

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 234 tgaaaatggtgctggtggtga 254
           |||||||||||||||||||||
Sbjct: 254 tgaaaatggtgctggtggtga 274
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>emb|BX908808.1| Neurospora crassa DNA linkage group IV Cosmid contig G21B4
          Length = 177225

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 363   tcgccaacctctcctgcgtct 383
             |||||||||||||||||||||
Sbjct: 55491 tcgccaacctctcctgcgtct 55511
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>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13
          Length = 348676

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 394   cgacgaggtcgccaagcaggtgctg 418
             ||||||||||||||||| |||||||
Sbjct: 63477 cgacgaggtcgccaagctggtgctg 63453
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>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             11/14
          Length = 318050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 394   cgacgaggtcgccaagcaggtgctg 418
             ||||||||||||||||| |||||||
Sbjct: 14030 cgacgaggtcgccaagctggtgctg 14006
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>gb|AC104165.2| Homo sapiens chromosome 3 clone RP11-681O4, complete sequence
          Length = 200956

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 417   tgtggaaggagttctgccatg 437
             |||||||||||||||||||||
Sbjct: 45144 tgtggaaggagttctgccatg 45124
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>gb|AC108443.18| Mus musculus chromosome 7, clone RP23-13J9, complete sequence
          Length = 198138

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 419    tggaaggagttctgccatgcc 439
              |||||||||||||||||||||
Sbjct: 183659 tggaaggagttctgccatgcc 183639
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 394     cgacgaggtcgccaagcaggtgctg 418
               ||||||||||||||||| |||||||
Sbjct: 3275920 cgacgaggtcgccaagctggtgctg 3275896
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 234     tgaaaatggtgctggtggtga 254
               |||||||||||||||||||||
Sbjct: 3245111 tgaaaatggtgctggtggtga 3245091
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>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 223    gatttgactgctgaaaatggtgct 246
              ||||||||||||||||||| ||||
Sbjct: 152492 gatttgactgctgaaaatgttgct 152515
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>ref|NM_111567.2| Arabidopsis thaliana unknown protein AT3G06870 mRNA, complete cds
          Length = 931

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 238 aatggtgctggtggtgaagcagca 261
           ||||||| ||||||||||||||||
Sbjct: 282 aatggtggtggtggtgaagcagca 259
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>gb|BC081207.1| Xenopus laevis hypothetical protein LOC446942, mRNA (cDNA clone
           IMAGE:6949029), partial cds
          Length = 1471

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 231 tgctgaaaatggtgctggtggtga 254
           ||||||||||||||||| ||||||
Sbjct: 200 tgctgaaaatggtgctgttggtga 177
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>ref|NM_007993.1| Mus musculus fibrillin 1 (Fbn1), mRNA
          Length = 9830

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 11  cactcgctccgccaccgccgcgcc 34
           ||||||||||||| ||||||||||
Sbjct: 204 cactcgctccgccgccgccgcgcc 181
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>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     ctccgccaccgccgcgcccc 36
              ||||||||||||||||||||
Sbjct: 267819 ctccgccaccgccgcgcccc 267838
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>gb|BC049930.1| Mus musculus cDNA clone IMAGE:5252102, partial cds
          Length = 1270

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 11  cactcgctccgccaccgccgcgcc 34
           ||||||||||||| ||||||||||
Sbjct: 380 cactcgctccgccgccgccgcgcc 403
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>gb|AC016827.7|ATAC016827 Arabidopsis thaliana chromosome III BAC F17A9 genomic sequence,
            complete sequence
          Length = 90142

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 238  aatggtgctggtggtgaagcagca 261
            ||||||| ||||||||||||||||
Sbjct: 7772 aatggtggtggtggtgaagcagca 7795
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>emb|AL157938.22| Human DNA sequence from clone RP11-544A12 on chromosome 9q34.13-34.3
              Contains the 3' end of the LAMC3 gene for laminin gamma 3,
              the gene for ionized calcium binding adaptor (IBA2), the
              NUP214 gene for nucleoporin 214kDa, a novel gene, a
              ribosomal protein L13a (RPL13A) pseudogene, the gene for a
              novel protein (FLJ00024) and four CpG islands, complete
              sequence
          Length = 197019

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    ggggcgcatggggaggtagg 203
              ||||||||||||||||||||
Sbjct: 179300 ggggcgcatggggaggtagg 179281
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>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and
             flanking regions
          Length = 116831

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   cgcgctgttcctcgtcttcc 335
             ||||||||||||||||||||
Sbjct: 16589 cgcgctgttcctcgtcttcc 16570
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>ref|NM_075132.2| Caenorhabditis elegans abnormal embryonic PARtitioning of cytoplasm
            family member (par-4) (par-4) mRNA, complete cds
          Length = 2328

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  gactgctgaaaatggtgctg 247
            ||||||||||||||||||||
Sbjct: 1724 gactgctgaaaatggtgctg 1743
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>emb|BX832404.1|CNS09ZNW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH70ZE04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1480

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 238 aatggtgctggtggtgaagcagca 261
           ||||||| ||||||||||||||||
Sbjct: 937 aatggtggtggtggtgaagcagca 960
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 274     ctcggcgtcctgctcctgca 293
               ||||||||||||||||||||
Sbjct: 5715117 ctcggcgtcctgctcctgca 5715098
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 228     gactgctgaaaatggtgctggtgg 251
               ||||||||||||||| ||||||||
Sbjct: 3172685 gactgctgaaaatggggctggtgg 3172662
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>gb|AF160189.1|AF160189 Caenorhabditis elegans putative serine-threonine kinase PAR-4 (par-4)
            mRNA, complete cds
          Length = 2351

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  gactgctgaaaatggtgctg 247
            ||||||||||||||||||||
Sbjct: 1747 gactgctgaaaatggtgctg 1766
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>emb|AL132863.1|CEY37H2A Caenorhabditis elegans YAC Y37H2A, complete sequence
          Length = 40560

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  gactgctgaaaatggtgctg 247
            ||||||||||||||||||||
Sbjct: 2147 gactgctgaaaatggtgctg 2166
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>gb|AC171502.2| Mus musculus BAC clone RP23-242G4 from chromosome 6, complete sequence
          Length = 209147

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 321    tgttcctcgtcttccgccacatgaactg 348
              ||||||||||||||| |||| |||||||
Sbjct: 137835 tgttcctcgtcttcctccacttgaactg 137862
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>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 223    gatttgactgctgaaaatggtgct 246
              ||||||||||||||||||| ||||
Sbjct: 152487 gatttgactgctgaaaatgttgct 152510
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>gb|U22493.1|MMU22493 Mus musculus fibrillin-1 (Fbn1) mRNA, complete cds
          Length = 9830

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 11  cactcgctccgccaccgccgcgcc 34
           ||||||||||||| ||||||||||
Sbjct: 204 cactcgctccgccgccgccgcgcc 181
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>emb|AL731826.12| Mouse DNA sequence from clone RP23-123O12 on chromosome 2, complete
             sequence
          Length = 194661

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 290   tgcaccaagggccacctcagcgag 313
             |||| |||||||||||||||||||
Sbjct: 70178 tgcagcaagggccacctcagcgag 70155


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,213,364
Number of Sequences: 3902068
Number of extensions: 3213364
Number of successful extensions: 67685
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67164
Number of HSP's gapped (non-prelim): 517
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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