>NLP32_CAEEL (Q09982) Putative neuropeptide-like protein 32 precursor [Contains:|
           YGGWG-amide; GGW-amide; GG-amide; GYG-amide;
           GGGWG-amide; GGGW-amide; GGG-amide; GFYGG-amide;
           GW-amide]
          Length = 105

 Score = 34.7 bits (78), Expect = 0.073
 Identities = 16/35 (45%), Positives = 16/35 (45%)
 Frame = -1

Query: 105 GGAGEWDSGDGLGLGGACRARSGEGGAWRRRGKRR 1
           GG G W  G G G GG      G GG W R G  R
Sbjct: 59  GGRGGWGRGGGRGYGGRGGGWGGRGGGWGRGGGGR 93

>IAA13_ARATH (Q38831) Auxin-responsive protein IAA13 (Indoleacetic acid-induced|
           protein 13)
          Length = 247

 Score = 32.3 bits (72), Expect = 0.36
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = -1

Query: 102 GAGEWDSGDGLGLGGACRA---RSGEGGAWRRRGK 7
           G  E + G GL LGG   A   +SG GGAW  RG+
Sbjct: 10  GESELELGLGLSLGGGTAAKIGKSGGGGAWGERGR 44

>DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 672

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = -1

Query: 165 GVAAAASRRCWSEERTRRAQGGAGEWDSGDGLGLGGACRARSGEGGAWRRRG 10
           G AA A+   +        +GGAG WD+    G GGA R   G GG  R  G
Sbjct: 81  GPAAPAAPAAFQSFNRGAPRGGAGGWDAPSSGGYGGA-RNGGGYGGGARNDG 131

>EFNB3_MOUSE (O35393) Ephrin-B3 precursor|
          Length = 340

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -1

Query: 165 GVAAAASRRCWSEERTRRAQG---GAGEWDSGDGLGLGG 58
           GVA A    CW   R + ++    G G +  G  LGLGG
Sbjct: 241 GVAGAGGAMCWRRRRAKPSESRHPGPGSFGRGGSLGLGG 279

>EFNB3_HUMAN (Q15768) Ephrin-B3 precursor (EPH-related receptor tyrosine kinase|
           ligand 8) (LERK-8) (EPH-related receptor transmembrane
           ligand ELK-L3)
          Length = 340

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -1

Query: 165 GVAAAASRRCWSEERTRRAQG---GAGEWDSGDGLGLGG 58
           GVA A    CW   R + ++    G G +  G  LGLGG
Sbjct: 241 GVAGAGGAMCWRRRRAKPSESRHPGPGSFGRGGSLGLGG 279

>FBRL_RAT (P22509) Fibrillarin (Nucleolar protein 1)|
          Length = 327

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -1

Query: 108 QGGAGEWDSGDGLGLGGACRARSGEGGAWRRRG 10
           +GG G +  G G G GG  R R G GG +R RG
Sbjct: 28  RGGRGGFGGGRG-GFGGGGRGRGGGGGGFRGRG 59

>FBRL_MOUSE (P35550) Fibrillarin (Nucleolar protein 1)|
          Length = 327

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -1

Query: 108 QGGAGEWDSGDGLGLGGACRARSGEGGAWRRRG 10
           +GG G +  G G G GG  R R G GG +R RG
Sbjct: 28  RGGRGGFGGGRG-GFGGGGRGRGGGGGGFRGRG 59

>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 8/43 (18%)
 Frame = -1

Query: 105  GGAGE--------WDSGDGLGLGGACRARSGEGGAWRRRGKRR 1
            GGAGE          +G GLG GGA    +GE G   RR +RR
Sbjct: 969  GGAGEAGLGAGAGLGAGAGLGAGGAGGPGAGEAGGGARRRRRR 1011



 Score = 29.3 bits (64), Expect = 3.1
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
 Frame = -1

Query: 123  RTRRAQGGAGEWDSGD------GLGLGGACRARSGEGGAWRRRGK 7
            R RR + GAGEW +G        LG G     R G GG  R  G+
Sbjct: 1415 RRRRWRPGAGEWGAGPDSFVFFSLGGGRGRGGRGGRGGRGRGGGR 1459

>PGTL_PELAC (P80563) Pyrogallol hydroxytransferase large subunit (EC 1.97.1.2)|
           (Transhydroxylase alpha subunit)
          Length = 874

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 150 ASRRCWSEERTRRAQGGAGEWDSGDGLGLGGACRARSG 37
           A  R W+++ T  A GG G W        GGACRA  G
Sbjct: 333 ALARQWAKKNTYLAAGGLGGW--------GGACRASHG 362

>COHA1_MOUSE (Q07563) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2)
          Length = 1470

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -1

Query: 108 QGGAGEWDSGDGLGLGGACRARSGEGGAW 22
           +GG G    G G G GG     SG GGAW
Sbjct: 430 RGGGGGRGKGGGAGGGGGGGGASGGGGAW 458

>TOP3A_DROME (Q9NG98) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase|
           III alpha)
          Length = 1250

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 105 GGAGEWDSGDGLGLGGACRARSGEGGAWRRRGKR 4
           GG+G W SG G G  G   + +G GG    +GK+
Sbjct: 806 GGSGGWGSGTGGGGSGGWGSGTGGGGLGGGKGKK 839

>NONA_DROLR (Q9GRX4) Protein no-on-transient A|
          Length = 698

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -1

Query: 156 AAASRRCWSEERTRRAQGGAGEWDSGDGLGLGGACRARSGEGGAWRRRGKR 4
           A A     ++ +  RA+GG G    G G G GG      G GG  R RG R
Sbjct: 185 AQAQAHAHAQNQAFRARGGGGGGGGGGGGGGGG------GGGGRDRNRGSR 229

>CT160_HUMAN (Q9NUG4) Protein C20orf160|
          Length = 571

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -1

Query: 144 RRCWSEERTRRAQGGAGEWDSGDGLGLGGACRARSGEGGAWRRR 13
           R+ +S    RR  GG G   +G   G     +A SG GG+W RR
Sbjct: 240 RQTFSGSWERRHGGGGGGGGAGKPGGSWERRQAGSGGGGSWERR 283

>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A|
          Length = 166

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -1

Query: 105 GGAGEWDSGDGLGLGGACRARSGEGGAW 22
           GG G  D G+G G GG     SG GG W
Sbjct: 144 GGGGRRDGGEGGGYGG-----SGGGGGW 166



 Score = 28.9 bits (63), Expect = 4.0
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -1

Query: 114 RAQGGAGEWDSGDGLGLGGACRARSGEGGAWRRRG 10
           R+ GG G    G G G GG     SG GG +  RG
Sbjct: 103 RSGGGGGYGGGGGGYGGGGREGGYSGGGGGYSSRG 137

>DVL1_PANTR (Q5IS48) Segment polarity protein dishevelled homolog DVL-1|
           (Dishevelled-1) (DSH homolog 1)
          Length = 670

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = -1

Query: 150 ASRRCWSEERTRRAQGGAGEWDSGDGLGLGGACRARSGEGGAWRRR 13
           +SRR    E+ RRA G  G     D         A SG G +WR R
Sbjct: 556 SSRRAPGREKERRAAGAGGSGSESDH-------TAPSGVGSSWRER 594

>DVL1_HUMAN (O14640) Segment polarity protein dishevelled homolog DVL-1|
           (Dishevelled-1) (DSH homolog 1)
          Length = 670

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = -1

Query: 150 ASRRCWSEERTRRAQGGAGEWDSGDGLGLGGACRARSGEGGAWRRR 13
           +SRR    E+ RRA G  G     D         A SG G +WR R
Sbjct: 556 SSRRAPGREKERRAAGAGGSGSESDH-------TAPSGVGSSWRER 594

>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)|
          Length = 142

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 132 SEERTRRAQGGAGEWDSGDGLGLGGACRARSGEGGAW 22
           +E ++R  +GG G    G G G GG    R G GG +
Sbjct: 61  NEAQSRGGRGGGGGGGYGGGRGGGGGYGRRDGGGGGY 97

>GP156_HUMAN (Q8NFN8) Probable G-protein coupled receptor 156 (GABAB-related|
           G-protein coupled receptor) (G-protein coupled receptor
           PGR28)
          Length = 814

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
 Frame = +3

Query: 78  PQNPTPLLLPVRAASSP----HSNSAERPPRR 161
           P NP+  LLP R  S P    H  ++E PP R
Sbjct: 506 PMNPSQSLLPDRGGSDPQRQRHLENSEEPPER 537

>AVEN_HUMAN (Q9NQS1) Cell death regulator Aven|
          Length = 362

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
 Frame = -1

Query: 147 SRRCWSEERTRRAQGGAGEWDSGDGLGLG---GACRARSGEGGAWRRRGKRR 1
           S R  +     R  GG G  D G   G G   G   AR G GG    RG RR
Sbjct: 26  SERPGAAAAVARGGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRR 77

>FA98B_MOUSE (Q80VD1) Protein FAM98B|
          Length = 429

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = -1

Query: 117 RRAQGGAGEWDSGDG-LGLGGACRARSGEGGAW 22
           R+  GG G W  G G  G GG  R   G GG W
Sbjct: 328 RQEGGGRGGWGGGGGGRGGGGGGRGGWGGGGGW 360



 Score = 28.1 bits (61), Expect = 6.8
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = -1

Query: 105 GGAGEWDSGDGLGLGGACRARSGEGGAWRRRG 10
           GG G W  G G G GG      G GG W   G
Sbjct: 349 GGRGGWGGGGGWGGGG------GSGGGWGGSG 374

>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor|
          Length = 1901

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 105  GGAGEWDSGDGLGLGGACRARSGEGGA 25
            G  GE  SG GLGL G    + G+GGA
Sbjct: 1203 GDGGEGASGLGLGLSGFDGGQGGQGGA 1229

>TOC75_ORYSA (Q84Q83) Protein TOC75, chloroplast precursor (75 kDa translocon at|
           the outer-envelope-membrane of chloroplasts)
          Length = 817

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -1

Query: 105 GGAGEWDSGDGLGLGGACRARSGEGGAWRR 16
           GG G W +G G G GG      G GG W R
Sbjct: 101 GGGGGWGAGGGGGGGGG----GGGGGFWSR 126

>POPA_RALSO (Q9RBS0) Protein popA1 [Contains: Protein popA2; Protein popA3]|
          Length = 344

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 105 GGAGEWDSGDGLGLGGACRARSGEGGAWRRRG 10
           GGAG   +G G+G  G     SG GGA    G
Sbjct: 176 GGAGAGGAGGGVGGAGGADGGSGAGGAGGANG 207

>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)|
           (EBNA-1)
          Length = 641

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = -1

Query: 105 GGAGEWDSGDGLGLGGACRARSGEGGAWRRRG 10
           GGAG   +G G G GGA     G GG  R RG
Sbjct: 306 GGAGGAGAGGGAGAGGA-----GAGGGGRGRG 332



 Score = 27.7 bits (60), Expect = 8.9
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -1

Query: 111 AQGGAGEWDSGDGLGLGGACRARSGEGGA 25
           A GGAG      G G GG   A  G GGA
Sbjct: 111 AGGGAGGAGGAGGAGAGGGAGAGGGAGGA 139

>MAD1_ASHGO (Q754Z1) Spindle assembly checkpoint component MAD1 (Mitotic arrest|
           deficient protein 1)
          Length = 659

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -1

Query: 165 GVAAAASRRCWSEERTRRAQGGAGEWDSGDGLGLGGACRARSGEGGA 25
           G AAAA R   +EER R A+  A E +       G A  A     GA
Sbjct: 96  GGAAAAERAAAAEERARAAEARARELEEALQAARGEAAAAERAAAGA 142

>ACES_CHICK (P36196) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)|
          Length = 767

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -1

Query: 135 WSEERTRRAQGGAGEWDSGDGLGLGGACRARSGEGGAWRRRGKR 4
           W +   +  +GG G      G G+ G    + G GG +  RG R
Sbjct: 337 WGDYGVKGGEGGHGVEGGDGGYGVKGGDGVKGGYGGGYGARGVR 380

>CASC3_RAT (Q8K3X0) Protein CASC3 (Cancer susceptibility candidate gene 3|
           protein homolog) (Barentsz protein) (Btz)
          Length = 699

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -1

Query: 153 AASRRCWSEERTRRAQGGAGEWDSGDGLGLGGACRARSGEGGA 25
           A  RR  + + T   + GA   DSG     GG+C   +G GG+
Sbjct: 2   ADRRRQRASQDTEDEESGASGSDSGSPARGGGSCSGSAGGGGS 44

>NOLA1_DROME (Q7KVQ0) H/ACA ribonucleoprotein complex subunit 1-like protein|
           (GCR 101 snRNP)
          Length = 237

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -1

Query: 108 QGGAGEWDSGDGLGLGGACRARSGEGGAWRRRGK 7
           +GGAG   +G G G GG  R R G GG    RG+
Sbjct: 205 RGGAGR--NGGGGGGGGFNRGRGGGGGGGGGRGR 236

>BIND_STRFN (P23118) Bindin precursor|
          Length = 485

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -1

Query: 111 AQGGAGEWDSGDGLGLGGACRARSGEGGA 25
           AQG  G +  G G G+GGA R   G GGA
Sbjct: 277 AQGMGGAF--GGGQGMGGAVRGGQGMGGA 303

>SCRT2_HUMAN (Q9NQ03) Transcriptional repressor scratch 2 (Scratch homolog 2|
           zinc finger protein)
          Length = 307

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -1

Query: 132 SEERTRRAQGGAG--EWDSGDGLGLGGACRARSGEGGAWRRRGKR 4
           S+ R+RR +GG G     SGD  G GG    R+G  GA    G R
Sbjct: 114 SDGRSRRRRGGGGGDAGGSGDAGGAGG----RAGRAGAQAGGGHR 154

>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog|
          Length = 342

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = -1

Query: 105 GGAGEWDSGDGLGLGGACRARSGEGGAWRRRG 10
           GG   W  G G+G G       G  G W   G
Sbjct: 253 GGGDRWGGGGGMGGGDRYGGGGGRSGGWSNDG 284

>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1)
          Length = 371

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -1

Query: 105 GGAGEWDS---GDGLGLGGACRARSGEGGAWRRRG 10
           GG+G +DS   G G G GG   +  G GG++   G
Sbjct: 281 GGSGSYDSYNNGGGRGFGGGSGSNFGGGGSYNDFG 315

>CU36_MANSE (Q8MUC5) Pupal cuticle protein 36 precursor (MsCP36) (MS-PCP36)|
          Length = 342

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1

Query: 105 GGAGEWDSGDGLGLGGACRARSGEGGA 25
           GGAG    G G G GG      G GGA
Sbjct: 57  GGAGSGFGGAGSGFGGGAGGAFGHGGA 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,049,935
Number of Sequences: 219361
Number of extensions: 272243
Number of successful extensions: 2756
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2669
length of database: 80,573,946
effective HSP length: 30
effective length of database: 73,993,116
effective search space used: 1775834784
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)