ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast34h02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ438324.1|TAE438324 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt3i3c Length = 612 Score = 214 bits (108), Expect = 1e-52 Identities = 260/310 (83%), Gaps = 3/310 (0%) Strand = Plus / Minus Query: 38 gaagcctcacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaa 97 |||||||||||| ||| | |||||||||||| |||||||||| || |||| |||||||| Sbjct: 586 gaagcctcacgcggtgatcgtgccgttgccgacgcaggggcacgtcacgcccatgctgaa 527 Query: 98 gctggccaagctccttcactgcaaggccggtttccacattaccttcgtccacaccgagta 157 |||||||||||| |||||||||||| || |||||||| ||||||||| |||||||||| Sbjct: 526 gctggccaagcttcttcactgcaag---ggcttccacatcaccttcgtcaacaccgagta 470 Query: 158 caaccaacggcgtctggtccggtcccacggccccggagccctgaccggcgtcccgggctt 217 |||||| ||||| |||||||| |||| |||| || |||| || ||| |||||| ||| Sbjct: 469 caaccaccggcgcctggtccgctcccgcggcgacgcagccgtggagggcctcccggactt 410 Query: 218 ccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcatcacaggaccc 277 |||||||||||||||||||||||| ||||| || |||||||| || || | |||||| Sbjct: 409 ccgcttcgccaccatccccgacggcctgccgccatcggacgcggatgccacgcaggacat 350 Query: 278 ggcgtccatctgctactccacaatgaccacctgcctcccccacttcaagaagctgctcca 337 | ||| | ||||||||||| |||||||||||||| |||| ||| |||| ||||||| Sbjct: 349 accctccctgtgctactccacgatgaccacctgccttccccccttgaagaggctgctcgg 290 Query: 338 ggagctcaac 347 |||||||||| Sbjct: 289 ggagctcaac 280
>emb|AJ438325.1|TAE438325 Triticum aestivum partial mRNA for glucosyltransferase (GbssI gene), clone ugt3i3e Length = 612 Score = 206 bits (104), Expect = 4e-50 Identities = 259/310 (83%), Gaps = 3/310 (0%) Strand = Plus / Minus Query: 38 gaagcctcacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaa 97 |||||||||||| ||| | |||||||||||| |||||||||| || |||| |||||||| Sbjct: 586 gaagcctcacgcggtgatcgtgccgttgccgacgcaggggcacgtcacgcccatgctgaa 527 Query: 98 gctggccaagctccttcactgcaaggccggtttccacattaccttcgtccacaccgagta 157 |||||||||||| |||||||||||| || |||||||| ||||||||| |||||||||| Sbjct: 526 gctggccaagcttcttcactgcaag---ggcttccacatcaccttcgtcaacaccgagta 470 Query: 158 caaccaacggcgtctggtccggtcccacggccccggagccctgaccggcgtcccgggctt 217 |||||| ||||| |||||||| |||| |||| || ||| || ||| |||||| ||| Sbjct: 469 caaccaccggcgcctggtccgctcccgcggcgacgcggccgtggagggcctcccggactt 410 Query: 218 ccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcatcacaggaccc 277 |||||||||||||||||||||||| ||||| || |||||||| || || | |||||| Sbjct: 409 ccgcttcgccaccatccccgacggcctgccgccatcggacgcggatgccacgcaggacat 350 Query: 278 ggcgtccatctgctactccacaatgaccacctgcctcccccacttcaagaagctgctcca 337 | ||| | ||||||||||| |||||||||||||| |||| ||| |||| ||||||| Sbjct: 349 accctccctgtgctactccacgatgaccacctgccttccccccttgaagaggctgctcgg 290 Query: 338 ggagctcaac 347 |||||||||| Sbjct: 289 ggagctcaac 280
>ref|XM_466409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 198 bits (100), Expect = 9e-48 Identities = 234/278 (84%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||||||| |||||||||||||| | || |||| Sbjct: 41 tgccgttcccggcgcaggggcacgtcacgccgatgatgaagctggccaaggtgctccact 100 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 ||| || | |||||| | || |||||| |||||||||||||||| || || || ||| Sbjct: 101 gcaggggc---ttccacgtcacgttcgtcaacaccgagtacaaccaccgccgcctcatcc 157 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| ||| || |||| |||||||| |||||||||||||||||||||| Sbjct: 158 gctcccgcggcgccgccgccgtggccggggtcccggggttccgcttcgccaccatccccg 217 Query: 238 acgggctgcccccgtcggacgcagacgcatcacaggacccggcgtccatctgctactcca 297 |||| || || ||||| ||||| ||||| | |||||||||||||| ||||||||||||| Sbjct: 218 acggcctcccgccgtccgacgccgacgccacgcaggacccggcgtcgatctgctactcca 277 Query: 298 caatgaccacctgcctcccccacttcaagaagctgctc 335 | ||||||||||||||||| ||||||| |||||||||| Sbjct: 278 ccatgaccacctgcctcccgcacttcacgaagctgctc 315
>ref|XM_466410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 198 bits (100), Expect = 9e-48 Identities = 234/278 (84%), Gaps = 3/278 (1%) Strand = Plus / Minus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||||||| |||||||||||||| | || |||| Sbjct: 1299 tgccgttcccggcgcaggggcacgtcacgccgatgatgaagctggccaaggtgctccact 1240 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 ||| || | |||||| | || |||||| |||||||||||||||| || || || ||| Sbjct: 1239 gcaggggc---ttccacgtcacgttcgtcaacaccgagtacaaccaccgccgcctcatcc 1183 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| ||| || |||| |||||||| |||||||||||||||||||||| Sbjct: 1182 gctcccgcggcgccgccgccgtggccggggtcccggggttccgcttcgccaccatccccg 1123 Query: 238 acgggctgcccccgtcggacgcagacgcatcacaggacccggcgtccatctgctactcca 297 |||| || || ||||| ||||| ||||| | |||||||||||||| ||||||||||||| Sbjct: 1122 acggcctcccgccgtccgacgccgacgccacgcaggacccggcgtcgatctgctactcca 1063 Query: 298 caatgaccacctgcctcccccacttcaagaagctgctc 335 | ||||||||||||||||| ||||||| |||||||||| Sbjct: 1062 ccatgaccacctgcctcccgcacttcacgaagctgctc 1025
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 198 bits (100), Expect = 9e-48 Identities = 234/278 (84%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||||||| |||||||||||||| | || |||| Sbjct: 22234672 tgccgttcccggcgcaggggcacgtcacgccgatgatgaagctggccaaggtgctccact 22234731 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 ||| || | |||||| | || |||||| |||||||||||||||| || || || ||| Sbjct: 22234732 gcaggggc---ttccacgtcacgttcgtcaacaccgagtacaaccaccgccgcctcatcc 22234788 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| ||| || |||| |||||||| |||||||||||||||||||||| Sbjct: 22234789 gctcccgcggcgccgccgccgtggccggggtcccggggttccgcttcgccaccatccccg 22234848 Query: 238 acgggctgcccccgtcggacgcagacgcatcacaggacccggcgtccatctgctactcca 297 |||| || || ||||| ||||| ||||| | |||||||||||||| ||||||||||||| Sbjct: 22234849 acggcctcccgccgtccgacgccgacgccacgcaggacccggcgtcgatctgctactcca 22234908 Query: 298 caatgaccacctgcctcccccacttcaagaagctgctc 335 | ||||||||||||||||| ||||||| |||||||||| Sbjct: 22234909 ccatgaccacctgcctcccgcacttcacgaagctgctc 22234946 Score = 182 bits (92), Expect = 5e-43 Identities = 232/278 (83%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| ||||||||||||| |||||||| |||||||||||||| |||| |||| Sbjct: 22249139 tgccgttcccggcgcaggggcacatcacgccgatgatgaagctggccaagatcctccact 22249198 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 || || | |||||| | ||||||||| ||||||||||||||| || || || |||| Sbjct: 22249199 ccaggggc---ttccacgtcaccttcgtcagcaccgagtacaaccaccgccgcctcgtcc 22249255 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| ||| | |||| ||||||| |||||||||||||||||||| | Sbjct: 22249256 gctcccgcggcgccgccgccgcggccggaatcccggggttccgcttcgccaccatcccgg 22249315 Query: 238 acgggctgcccccgtcggacgcagacgcatcacaggacccggcgtccatctgctactcca 297 |||| ||||| ||||| ||||| ||||| | ||||||||| |||| || ||||||||| Sbjct: 22249316 acggcctgccgccgtccgacgccgacgccacgcaggacccgccgtcgctcagctactcca 22249375 Query: 298 caatgaccacctgcctcccccacttcaagaagctgctc 335 | ||||||||||||||||||||||||| |||||||||| Sbjct: 22249376 ccatgaccacctgcctcccccacttcaggaagctgctc 22249413 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 208 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 267 ||||||| |||||||||||||||||||| ||||| || || |||| ||||| ||||| Sbjct: 22222314 tcccggggttccgcttcgccaccatcccggacggcctcccgccgtgcgacgccgacgcca 22222373 Query: 268 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 327 | |||||| ||||| |||||||| | ||||| |||||||||||||| ||||||||||||| Sbjct: 22222374 cgcaggacgcggcggccatctgccagtccaccatgaccacctgcctgccccacttcaaga 22222433 Score = 79.8 bits (40), Expect = 5e-12 Identities = 90/106 (84%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||||||| |||||||||||||| |||| ||| Sbjct: 22222161 tgccgttcccggcgcaggggcacgtcacgccgatgatgaagctggccaagatcctccacg 22222220 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaacca 163 ||| || | |||||| | |||||||||||||||||||||||||| Sbjct: 22222221 gcaggggc---ttccacgtcaccttcgtccacaccgagtacaacca 22222263 Score = 73.8 bits (37), Expect = 3e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 210 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 258 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 31824740 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 31824788 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 295 ccacaatgaccacctgcctcccccacttcaagaagctgctc 335 |||| ||||| |||||||||||| |||||| |||||||||| Sbjct: 27750459 ccaccatgactacctgcctcccctacttcaggaagctgctc 27750499 Score = 48.1 bits (24), Expect = 0.019 Identities = 72/88 (81%) Strand = Plus / Minus Query: 138 accttcgtccacaccgagtacaaccaacggcgtctggtccggtcccacggccccggagcc 197 |||| |||| || ||||||||||||| || || ||| |||||||| |||||| || || Sbjct: 31812108 acctacgtcaactccgagtacaaccaccgccgcctgctccggtccagcggccctggcgcg 31812049 Query: 198 ctgaccggcgtcccgggcttccgcttcg 225 ||| |||||| | |||||||||| |||| Sbjct: 31812048 ctggccggcgccgcgggcttccgtttcg 31812021 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 208 tcccgggcttccgcttcgccaccatccccgacgg 241 ||||||| |||| ||||||||||||||| ||||| Sbjct: 12247005 tcccggggttccacttcgccaccatcccggacgg 12247038 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 72 caggggcacatcgcgccgatgctgaagc 99 |||||||||||| |||||||| |||||| Sbjct: 23997955 caggggcacatcacgccgatgatgaagc 23997928
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 198 bits (100), Expect = 9e-48 Identities = 234/278 (84%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||||||| |||||||||||||| | || |||| Sbjct: 130516 tgccgttcccggcgcaggggcacgtcacgccgatgatgaagctggccaaggtgctccact 130575 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 ||| || | |||||| | || |||||| |||||||||||||||| || || || ||| Sbjct: 130576 gcaggggc---ttccacgtcacgttcgtcaacaccgagtacaaccaccgccgcctcatcc 130632 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| ||| || |||| |||||||| |||||||||||||||||||||| Sbjct: 130633 gctcccgcggcgccgccgccgtggccggggtcccggggttccgcttcgccaccatccccg 130692 Query: 238 acgggctgcccccgtcggacgcagacgcatcacaggacccggcgtccatctgctactcca 297 |||| || || ||||| ||||| ||||| | |||||||||||||| ||||||||||||| Sbjct: 130693 acggcctcccgccgtccgacgccgacgccacgcaggacccggcgtcgatctgctactcca 130752 Query: 298 caatgaccacctgcctcccccacttcaagaagctgctc 335 | ||||||||||||||||| ||||||| |||||||||| Sbjct: 130753 ccatgaccacctgcctcccgcacttcacgaagctgctc 130790 Score = 182 bits (92), Expect = 5e-43 Identities = 232/278 (83%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| ||||||||||||| |||||||| |||||||||||||| |||| |||| Sbjct: 144983 tgccgttcccggcgcaggggcacatcacgccgatgatgaagctggccaagatcctccact 145042 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 || || | |||||| | ||||||||| ||||||||||||||| || || || |||| Sbjct: 145043 ccaggggc---ttccacgtcaccttcgtcagcaccgagtacaaccaccgccgcctcgtcc 145099 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| ||| | |||| ||||||| |||||||||||||||||||| | Sbjct: 145100 gctcccgcggcgccgccgccgcggccggaatcccggggttccgcttcgccaccatcccgg 145159 Query: 238 acgggctgcccccgtcggacgcagacgcatcacaggacccggcgtccatctgctactcca 297 |||| ||||| ||||| ||||| ||||| | ||||||||| |||| || ||||||||| Sbjct: 145160 acggcctgccgccgtccgacgccgacgccacgcaggacccgccgtcgctcagctactcca 145219 Query: 298 caatgaccacctgcctcccccacttcaagaagctgctc 335 | ||||||||||||||||||||||||| |||||||||| Sbjct: 145220 ccatgaccacctgcctcccccacttcaggaagctgctc 145257 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 208 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 267 ||||||| |||||||||||||||||||| ||||| || || |||| ||||| ||||| Sbjct: 118158 tcccggggttccgcttcgccaccatcccggacggcctcccgccgtgcgacgccgacgcca 118217 Query: 268 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 327 | |||||| ||||| |||||||| | ||||| |||||||||||||| ||||||||||||| Sbjct: 118218 cgcaggacgcggcggccatctgccagtccaccatgaccacctgcctgccccacttcaaga 118277 Score = 79.8 bits (40), Expect = 5e-12 Identities = 90/106 (84%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||||||| |||||||||||||| |||| ||| Sbjct: 118005 tgccgttcccggcgcaggggcacgtcacgccgatgatgaagctggccaagatcctccacg 118064 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaacca 163 ||| || | |||||| | |||||||||||||||||||||||||| Sbjct: 118065 gcaggggc---ttccacgtcaccttcgtccacaccgagtacaacca 118107
>dbj|AK064085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B11, full insert sequence Length = 1505 Score = 198 bits (100), Expect = 9e-48 Identities = 234/278 (84%), Gaps = 3/278 (1%) Strand = Plus / Minus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||||||| |||||||||||||| | || |||| Sbjct: 1298 tgccgttcccggcgcaggggcacgtcacgccgatgatgaagctggccaaggtgctccact 1239 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 ||| || | |||||| | || |||||| |||||||||||||||| || || || ||| Sbjct: 1238 gcaggggc---ttccacgtcacgttcgtcaacaccgagtacaaccaccgccgcctcatcc 1182 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| ||| || |||| |||||||| |||||||||||||||||||||| Sbjct: 1181 gctcccgcggcgccgccgccgtggccggggtcccggggttccgcttcgccaccatccccg 1122 Query: 238 acgggctgcccccgtcggacgcagacgcatcacaggacccggcgtccatctgctactcca 297 |||| || || ||||| ||||| ||||| | |||||||||||||| ||||||||||||| Sbjct: 1121 acggcctcccgccgtccgacgccgacgccacgcaggacccggcgtcgatctgctactcca 1062 Query: 298 caatgaccacctgcctcccccacttcaagaagctgctc 335 | ||||||||||||||||| ||||||| |||||||||| Sbjct: 1061 ccatgaccacctgcctcccgcacttcacgaagctgctc 1024
>ref|XM_466413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1764 Score = 182 bits (92), Expect = 5e-43 Identities = 232/278 (83%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| ||||||||||||| |||||||| |||||||||||||| |||| |||| Sbjct: 172 tgccgttcccggcgcaggggcacatcacgccgatgatgaagctggccaagatcctccact 231 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 || || | |||||| | ||||||||| ||||||||||||||| || || || |||| Sbjct: 232 ccaggggc---ttccacgtcaccttcgtcagcaccgagtacaaccaccgccgcctcgtcc 288 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| ||| | |||| ||||||| |||||||||||||||||||| | Sbjct: 289 gctcccgcggcgccgccgccgcggccggaatcccggggttccgcttcgccaccatcccgg 348 Query: 238 acgggctgcccccgtcggacgcagacgcatcacaggacccggcgtccatctgctactcca 297 |||| ||||| ||||| ||||| ||||| | ||||||||| |||| || ||||||||| Sbjct: 349 acggcctgccgccgtccgacgccgacgccacgcaggacccgccgtcgctcagctactcca 408 Query: 298 caatgaccacctgcctcccccacttcaagaagctgctc 335 | ||||||||||||||||||||||||| |||||||||| Sbjct: 409 ccatgaccacctgcctcccccacttcaggaagctgctc 446
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 182 bits (92), Expect = 5e-43 Identities = 232/278 (83%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| ||||||||||||| |||||||| |||||||||||||| |||| |||| Sbjct: 7783 tgccgttcccggcgcaggggcacatcacgccgatgatgaagctggccaagatcctccact 7842 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 || || | |||||| | ||||||||| ||||||||||||||| || || || |||| Sbjct: 7843 ccaggggc---ttccacgtcaccttcgtcagcaccgagtacaaccaccgccgcctcgtcc 7899 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| ||| | |||| ||||||| |||||||||||||||||||| | Sbjct: 7900 gctcccgcggcgccgccgccgcggccggaatcccggggttccgcttcgccaccatcccgg 7959 Query: 238 acgggctgcccccgtcggacgcagacgcatcacaggacccggcgtccatctgctactcca 297 |||| ||||| ||||| ||||| ||||| | ||||||||| |||| || ||||||||| Sbjct: 7960 acggcctgccgccgtccgacgccgacgccacgcaggacccgccgtcgctcagctactcca 8019 Query: 298 caatgaccacctgcctcccccacttcaagaagctgctc 335 | ||||||||||||||||||||||||| |||||||||| Sbjct: 8020 ccatgaccacctgcctcccccacttcaggaagctgctc 8057
>dbj|AK105275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-A04, full insert sequence Length = 1764 Score = 182 bits (92), Expect = 5e-43 Identities = 232/278 (83%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| ||||||||||||| |||||||| |||||||||||||| |||| |||| Sbjct: 172 tgccgttcccggcgcaggggcacatcacgccgatgatgaagctggccaagatcctccact 231 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 || || | |||||| | ||||||||| ||||||||||||||| || || || |||| Sbjct: 232 ccaggggc---ttccacgtcaccttcgtcagcaccgagtacaaccaccgccgcctcgtcc 288 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| ||| | |||| ||||||| |||||||||||||||||||| | Sbjct: 289 gctcccgcggcgccgccgccgcggccggaatcccggggttccgcttcgccaccatcccgg 348 Query: 238 acgggctgcccccgtcggacgcagacgcatcacaggacccggcgtccatctgctactcca 297 |||| ||||| ||||| ||||| ||||| | ||||||||| |||| || ||||||||| Sbjct: 349 acggcctgccgccgtccgacgccgacgccacgcaggacccgccgtcgctcagctactcca 408 Query: 298 caatgaccacctgcctcccccacttcaagaagctgctc 335 | ||||||||||||||||||||||||| |||||||||| Sbjct: 409 ccatgaccacctgcctcccccacttcaggaagctgctc 446
>ref|XM_466406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1548 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 208 tcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcagacgcat 267 ||||||| |||||||||||||||||||| ||||| || || |||| ||||| ||||| Sbjct: 224 tcccggggttccgcttcgccaccatcccggacggcctcccgccgtgcgacgccgacgcca 283 Query: 268 cacaggacccggcgtccatctgctactccacaatgaccacctgcctcccccacttcaaga 327 | |||||| ||||| |||||||| | ||||| |||||||||||||| ||||||||||||| Sbjct: 284 cgcaggacgcggcggccatctgccagtccaccatgaccacctgcctgccccacttcaaga 343 Score = 79.8 bits (40), Expect = 5e-12 Identities = 90/106 (84%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||||||| |||||||||||||| |||| ||| Sbjct: 71 tgccgttcccggcgcaggggcacgtcacgccgatgatgaagctggccaagatcctccacg 130 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaacca 163 ||| || | |||||| | |||||||||||||||||||||||||| Sbjct: 131 gcaggggc---ttccacgtcaccttcgtccacaccgagtacaacca 173
>ref|XM_506982.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.33 mRNA Length = 1676 Score = 73.8 bits (37), Expect = 3e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 210 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 258 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 269 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 317
>ref|XM_467869.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 73.8 bits (37), Expect = 3e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 210 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 258 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 272 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 320
>ref|XM_472671.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1476 Score = 73.8 bits (37), Expect = 3e-10 Identities = 167/208 (80%), Gaps = 3/208 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||| ||||||||||| |||||| |||| ||| Sbjct: 47 tgccgttcccggcgcaggggcacgtcacgcccatgctgaagctcgccaagatcctccac- 105 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 || | || |||||||| ||||||||| ||||||||| |||||| || || || ||| Sbjct: 106 -caccg-tggcttccacatcaccttcgtcaacaccgagttcaaccaccgccgcctcctcc 163 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| || ||| |||| ||||||| |||||||||||| ||||||| | Sbjct: 164 gctcccgcggcgccgccgcgctggacggcctcccggggttccgcttcgccgccatcccgg 223 Query: 238 acgggctgcccccgtcggacgcagacgc 265 |||| || || ||||| ||||| ||||| Sbjct: 224 acggcctcccgccgtccgacgccgacgc 251
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 73.8 bits (37), Expect = 3e-10 Identities = 167/208 (80%), Gaps = 3/208 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||| ||||||||||| |||||| |||| ||| Sbjct: 60026 tgccgttcccggcgcaggggcacgtcacgcccatgctgaagctcgccaagatcctccac- 60084 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 || | || |||||||| ||||||||| ||||||||| |||||| || || || ||| Sbjct: 60085 -caccg-tggcttccacatcaccttcgtcaacaccgagttcaaccaccgccgcctcctcc 60142 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| || ||| |||| ||||||| |||||||||||| ||||||| | Sbjct: 60143 gctcccgcggcgccgccgcgctggacggcctcccggggttccgcttcgccgccatcccgg 60202 Query: 238 acgggctgcccccgtcggacgcagacgc 265 |||| || || ||||| ||||| ||||| Sbjct: 60203 acggcctcccgccgtccgacgccgacgc 60230
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 3e-10 Identities = 167/208 (80%), Gaps = 3/208 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||| ||||||||||| |||||| |||| ||| Sbjct: 22456271 tgccgttcccggcgcaggggcacgtcacgcccatgctgaagctcgccaagatcctccac- 22456329 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 || | || |||||||| ||||||||| ||||||||| |||||| || || || ||| Sbjct: 22456330 -caccg-tggcttccacatcaccttcgtcaacaccgagttcaaccaccgccgcctcctcc 22456387 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| || ||| |||| ||||||| |||||||||||| ||||||| | Sbjct: 22456388 gctcccgcggcgccgccgcgctggacggcctcccggggttccgcttcgccgccatcccgg 22456447 Query: 238 acgggctgcccccgtcggacgcagacgc 265 |||| || || ||||| ||||| ||||| Sbjct: 22456448 acggcctcccgccgtccgacgccgacgc 22456475 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 262 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 15164727 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtccgacgccga 15164668 Query: 263 cgc 265 ||| Sbjct: 15164667 cgc 15164665 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 286 tctgctactccacaatgaccacctgcctcccccac 320 ||||||||||||| ||||||||||||||||||||| Sbjct: 15152030 tctgctactccaccatgaccacctgcctcccccac 15151996 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 286 tctgctactccacaatgaccacctgcctcccccac 320 ||||||||||||| ||||||||||||||||||||| Sbjct: 14735855 tctgctactccaccatgaccacctgcctcccccac 14735889 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 262 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 14723267 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtctgacgccga 14723326 Query: 263 cgc 265 ||| Sbjct: 14723327 cgc 14723329 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||||||||||| Sbjct: 15152271 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgaagctggcc 15152212 Query: 105 aagct 109 ||||| Sbjct: 15152211 aagct 15152207 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||||||||||| Sbjct: 14735614 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgaagctggcc 14735673 Query: 105 aagct 109 ||||| Sbjct: 14735674 aagct 14735678 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 71 gcaggggcacatcgcgccgatgctgaagctggccaagct 109 |||||| |||||| |||||||| |||||||||||||||| Sbjct: 15164859 gcagggccacatcacgccgatgatgaagctggccaagct 15164821 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 244 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 15013088 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 15013129 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 244 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 14365474 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 14365433 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Plus Query: 206 cgtcccgggcttccgcttcgccaccatccccgacgg 241 |||||| || |||||||||||| ||||||||||||| Sbjct: 14735775 cgtccccgggttccgcttcgccgccatccccgacgg 14735810 Score = 46.1 bits (23), Expect = 0.077 Identities = 35/39 (89%) Strand = Plus / Plus Query: 71 gcaggggcacatcgcgccgatgctgaagctggccaagct 109 |||||| ||| || |||||||| |||||||||||||||| Sbjct: 14723135 gcagggccacgtcacgccgatgatgaagctggccaagct 14723173 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 71 gcaggggcacatcgcgccgatgctgaagctggcc 104 |||||| ||| || |||||||||||||||||||| Sbjct: 14830405 gcagggccacgtcacgccgatgctgaagctggcc 14830438 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||| |||||| Sbjct: 14787177 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgacgctggcg 14787118 Query: 105 aagct 109 ||||| Sbjct: 14787117 aagct 14787113 Score = 40.1 bits (20), Expect = 4.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 206 cgtcccgggcttccgcttcgccaccatccccgacgg 241 |||||| || |||||||||||| |||||||||||| Sbjct: 15152110 cgtccccgggttccgcttcgccggcatccccgacgg 15152075
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 73.8 bits (37), Expect = 3e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 210 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 258 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 120538 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 120586 Score = 48.1 bits (24), Expect = 0.019 Identities = 72/88 (81%) Strand = Plus / Minus Query: 138 accttcgtccacaccgagtacaaccaacggcgtctggtccggtcccacggccccggagcc 197 |||| |||| || ||||||||||||| || || ||| |||||||| |||||| || || Sbjct: 107906 acctacgtcaactccgagtacaaccaccgccgcctgctccggtccagcggccctggcgcg 107847 Query: 198 ctgaccggcgtcccgggcttccgcttcg 225 ||| |||||| | |||||||||| |||| Sbjct: 107846 ctggccggcgccgcgggcttccgtttcg 107819
>dbj|AK104985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F12, full insert sequence Length = 1677 Score = 73.8 bits (37), Expect = 3e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 210 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 258 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 269 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 317
>dbj|AK073587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052B15, full insert sequence Length = 1659 Score = 73.8 bits (37), Expect = 3e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 210 ccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacg 258 ||||||||||| |||||||||||||||||||| ||||| |||||||||| Sbjct: 272 ccgggcttccggttcgccaccatccccgacggcctgccgccgtcggacg 320
>dbj|AK068176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132G13, full insert sequence Length = 1759 Score = 73.8 bits (37), Expect = 3e-10 Identities = 167/208 (80%), Gaps = 3/208 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||| ||||||||||| |||||| |||| ||| Sbjct: 129 tgccgttcccggcgcaggggcacgtcacgcccatgctgaagctcgccaagatcctccac- 187 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 || | || |||||||| ||||||||| ||||||||| |||||| || || || ||| Sbjct: 188 -caccg-tggcttccacatcaccttcgtcaacaccgagttcaaccaccgccgcctcctcc 245 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| || ||| |||| ||||||| |||||||||||| ||||||| | Sbjct: 246 gctcccgcggcgccgccgcgctggacggcctcccggggttccgcttcgccgccatcccgg 305 Query: 238 acgggctgcccccgtcggacgcagacgc 265 |||| || || ||||| ||||| ||||| Sbjct: 306 acggcctcccgccgtccgacgccgacgc 333
>dbj|AK061024.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F02, full insert sequence Length = 1647 Score = 73.8 bits (37), Expect = 3e-10 Identities = 167/208 (80%), Gaps = 3/208 (1%) Strand = Plus / Plus Query: 58 tgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggccaagctccttcact 117 ||||||| ||| |||||||||| || |||| ||||||||||| |||||| |||| ||| Sbjct: 132 tgccgttcccggcgcaggggcacgtcacgcccatgctgaagctcgccaagatcctccac- 190 Query: 118 gcaaggccggtttccacattaccttcgtccacaccgagtacaaccaacggcgtctggtcc 177 || | || |||||||| ||||||||| ||||||||| |||||| || || || ||| Sbjct: 191 -caccg-tggcttccacatcaccttcgtcaacaccgagttcaaccaccgccgcctcctcc 248 Query: 178 ggtcccacggccccggagccctgaccggcgtcccgggcttccgcttcgccaccatccccg 237 | |||| |||| ||| || ||| |||| ||||||| |||||||||||| ||||||| | Sbjct: 249 gctcccgcggcgccgccgcgctggacggcctcccggggttccgcttcgccgccatcccgg 308 Query: 238 acgggctgcccccgtcggacgcagacgc 265 |||| || || ||||| ||||| ||||| Sbjct: 309 acggcctcccgccgtccgacgccgacgc 336
>ref|XM_471859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 286 tctgctactccacaatgaccacctgcctcccccac 320 ||||||||||||| ||||||||||||||||||||| Sbjct: 275 tctgctactccaccatgaccacctgcctcccccac 309 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||||||||||| Sbjct: 34 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgaagctggcc 93 Query: 105 aagct 109 ||||| Sbjct: 94 aagct 98 Score = 40.1 bits (20), Expect = 4.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 206 cgtcccgggcttccgcttcgccaccatccccgacgg 241 |||||| || |||||||||||| |||||||||||| Sbjct: 195 cgtccccgggttccgcttcgccggcatccccgacgg 230
>ref|XM_471860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 262 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 177 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtccgacgccga 236 Query: 263 cgc 265 ||| Sbjct: 237 cgc 239 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 71 gcaggggcacatcgcgccgatgctgaagctggccaagct 109 |||||| |||||| |||||||| |||||||||||||||| Sbjct: 45 gcagggccacatcacgccgatgatgaagctggccaagct 83
>ref|XM_471822.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 262 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 150 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtctgacgccga 209 Query: 263 cgc 265 ||| Sbjct: 210 cgc 212 Score = 46.1 bits (23), Expect = 0.077 Identities = 35/39 (89%) Strand = Plus / Plus Query: 71 gcaggggcacatcgcgccgatgctgaagctggccaagct 109 |||||| ||| || |||||||| |||||||||||||||| Sbjct: 18 gcagggccacgtcacgccgatgatgaagctggccaagct 56
>ref|XM_471823.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 286 tctgctactccacaatgaccacctgcctcccccac 320 ||||||||||||| ||||||||||||||||||||| Sbjct: 275 tctgctactccaccatgaccacctgcctcccccac 309 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||||||||||| Sbjct: 34 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgaagctggcc 93 Query: 105 aagct 109 ||||| Sbjct: 94 aagct 98 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Plus Query: 206 cgtcccgggcttccgcttcgccaccatccccgacgg 241 |||||| || |||||||||||| ||||||||||||| Sbjct: 195 cgtccccgggttccgcttcgccgccatccccgacgg 230
>emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033P05, complete sequence Length = 120635 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 262 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 57622 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtccgacgccga 57563 Query: 263 cgc 265 ||| Sbjct: 57562 cgc 57560 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 286 tctgctactccacaatgaccacctgcctcccccac 320 ||||||||||||| ||||||||||||||||||||| Sbjct: 44925 tctgctactccaccatgaccacctgcctcccccac 44891 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||||||||||| Sbjct: 45166 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgaagctggcc 45107 Query: 105 aagct 109 ||||| Sbjct: 45106 aagct 45102 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 71 gcaggggcacatcgcgccgatgctgaagctggccaagct 109 |||||| |||||| |||||||| |||||||||||||||| Sbjct: 57754 gcagggccacatcacgccgatgatgaagctggccaagct 57716 Score = 40.1 bits (20), Expect = 4.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 206 cgtcccgggcttccgcttcgccaccatccccgacgg 241 |||||| || |||||||||||| |||||||||||| Sbjct: 45005 cgtccccgggttccgcttcgccggcatccccgacgg 44970
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04, complete sequence Length = 129563 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 286 tctgctactccacaatgaccacctgcctcccccac 320 ||||||||||||| ||||||||||||||||||||| Sbjct: 75509 tctgctactccaccatgaccacctgcctcccccac 75543 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggctgcccccgtcggacgcaga 262 |||||| ||||| |||||||||||| ||||||||||||| || || ||||| ||||| || Sbjct: 62921 cggcgtgccggggttccgcttcgccgccatccccgacggcctcccgccgtctgacgccga 62980 Query: 263 cgc 265 ||| Sbjct: 62981 cgc 62983 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||||||||||| Sbjct: 75268 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgaagctggcc 75327 Query: 105 aagct 109 ||||| Sbjct: 75328 aagct 75332 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Plus Query: 206 cgtcccgggcttccgcttcgccaccatccccgacgg 241 |||||| || |||||||||||| ||||||||||||| Sbjct: 75429 cgtccccgggttccgcttcgccgccatccccgacgg 75464 Score = 46.1 bits (23), Expect = 0.077 Identities = 35/39 (89%) Strand = Plus / Plus Query: 71 gcaggggcacatcgcgccgatgctgaagctggccaagct 109 |||||| ||| || |||||||| |||||||||||||||| Sbjct: 62789 gcagggccacgtcacgccgatgatgaagctggccaagct 62827 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||| |||||| Sbjct: 126831 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgacgctggcg 126772 Query: 105 aagct 109 ||||| Sbjct: 126771 aagct 126767
>ref|XM_471848.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 244 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 183 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 224
>ref|XM_471795.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 244 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 183 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 224
>emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0054D14, complete sequence Length = 160587 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 244 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 29549 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 29590
>emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087H01, complete sequence Length = 166906 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 244 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 98393 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 98352
>dbj|AK106366.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-B11, full insert sequence Length = 1457 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 203 cggcgtcccgggcttccgcttcgccaccatccccgacgggct 244 |||||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1169 cggcgtgccgggcttcgtcttcgccgccatccccgacgggct 1128
>ref|NM_196193.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0032N04.23), mRNA Length = 708 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 295 ccacaatgaccacctgcctcccccacttcaagaagctgctc 335 |||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 392 ccaccatgactacctgcctcccccactttaggaagctgctc 432 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 208 tcccgggcttccgcttcgccaccatccccgacgg 241 ||||||| |||| ||||||||||||||| ||||| Sbjct: 335 tcccggggttcctcttcgccaccatcccggacgg 368
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 295 ccacaatgaccacctgcctcccccacttcaagaagctgctc 335 |||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 144518 ccaccatgactacctgcctcccccactttaggaagctgctc 144558 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 208 tcccgggcttccgcttcgccaccatccccgacgg 241 ||||||| |||| ||||||||||||||| ||||| Sbjct: 144461 tcccggggttcctcttcgccaccatcccggacgg 144494
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 295 ccacaatgaccacctgcctcccccacttcaagaagctgctc 335 |||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 87862 ccaccatgactacctgcctcccccactttaggaagctgctc 87822 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Minus Query: 208 tcccgggcttccgcttcgccaccatccccgacgg 241 ||||||| |||| ||||||||||||||| ||||| Sbjct: 87919 tcccggggttcctcttcgccaccatcccggacgg 87886
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 295 ccacaatgaccacctgcctcccccacttcaagaagctgctc 335 |||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 11826457 ccaccatgactacctgcctcccccactttaggaagctgctc 11826497 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 208 tcccgggcttccgcttcgccaccatccccgacgg 241 ||||||| |||| ||||||||||||||| ||||| Sbjct: 11826400 tcccggggttcctcttcgccaccatcccggacgg 11826433
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 295 ccacaatgaccacctgcctcccccacttcaagaagctgctc 335 |||| ||||| |||||||||||| |||||| |||||||||| Sbjct: 35792 ccaccatgactacctgcctcccctacttcaggaagctgctc 35832
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 295 ccacaatgaccacctgcctcccccacttcaagaagctgctc 335 |||| ||||| |||||||||||| |||||| |||||||||| Sbjct: 136325 ccaccatgactacctgcctcccctacttcaggaagctgctc 136365
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 295 ccacaatgaccacctgcctcccccacttcaagaagctgctc 335 |||| ||||| ||||||||||||||||| | |||||||||| Sbjct: 11833797 ccaccatgactacctgcctcccccactttaggaagctgctc 11833837 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 208 tcccgggcttccgcttcgccaccatccccgacgg 241 ||||||| |||| ||||||||||||||| ||||| Sbjct: 11833740 tcccggggttcctcttcgccaccatcccggacgg 11833773
>ref|XM_467865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1662 Score = 48.1 bits (24), Expect = 0.019 Identities = 72/88 (81%) Strand = Plus / Plus Query: 138 accttcgtccacaccgagtacaaccaacggcgtctggtccggtcccacggccccggagcc 197 |||| |||| || ||||||||||||| || || ||| |||||||| |||||| || || Sbjct: 187 acctacgtcaactccgagtacaaccaccgccgcctgctccggtccagcggccctggcgcg 246 Query: 198 ctgaccggcgtcccgggcttccgcttcg 225 ||| |||||| | |||||||||| |||| Sbjct: 247 ctggccggcgccgcgggcttccgtttcg 274
>ref|XM_506981.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.27 mRNA Length = 2591 Score = 48.1 bits (24), Expect = 0.019 Identities = 72/88 (81%) Strand = Plus / Plus Query: 138 accttcgtccacaccgagtacaaccaacggcgtctggtccggtcccacggccccggagcc 197 |||| |||| || ||||||||||||| || || ||| |||||||| |||||| || || Sbjct: 184 acctacgtcaactccgagtacaaccaccgccgcctgctccggtccagcggccctggcgcg 243 Query: 198 ctgaccggcgtcccgggcttccgcttcg 225 ||| |||||| | |||||||||| |||| Sbjct: 244 ctggccggcgccgcgggcttccgtttcg 271
>dbj|AK106639.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E02, full insert sequence Length = 2591 Score = 48.1 bits (24), Expect = 0.019 Identities = 72/88 (81%) Strand = Plus / Plus Query: 138 accttcgtccacaccgagtacaaccaacggcgtctggtccggtcccacggccccggagcc 197 |||| |||| || ||||||||||||| || || ||| |||||||| |||||| || || Sbjct: 184 acctacgtcaactccgagtacaaccaccgccgcctgctccggtccagcggccctggcgcg 243 Query: 198 ctgaccggcgtcccgggcttccgcttcg 225 ||| |||||| | |||||||||| |||| Sbjct: 244 ctggccggcgccgcgggcttccgtttcg 271
>dbj|AK064105.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D08, full insert sequence Length = 1662 Score = 48.1 bits (24), Expect = 0.019 Identities = 72/88 (81%) Strand = Plus / Plus Query: 138 accttcgtccacaccgagtacaaccaacggcgtctggtccggtcccacggccccggagcc 197 |||| |||| || ||||||||||||| || || ||| |||||||| |||||| || || Sbjct: 187 acctacgtcaactccgagtacaaccaccgccgcctgctccggtccagcggccctggcgcg 246 Query: 198 ctgaccggcgtcccgggcttccgcttcg 225 ||| |||||| | |||||||||| |||| Sbjct: 247 ctggccggcgccgcgggcttccgtttcg 274
>gb|AE007207.1| Sinorhizobium meliloti 1021 plasmid pSymA section 13 of 121 of the complete plasmid sequence Length = 10596 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Plus Query: 322 tcaagaagctgctccaggagctc 344 ||||||||||||||||||||||| Sbjct: 6900 tcaagaagctgctccaggagctc 6922
>emb|AL929452.9| Mouse DNA sequence from clone RP23-345L15 on chromosome X, complete sequence Length = 221920 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Plus Query: 97 agctggccaagctccttcactgc 119 ||||||||||||||||||||||| Sbjct: 158754 agctggccaagctccttcactgc 158776
>ref|XM_482293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1494 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 71 gcaggggcacatcgcgccgatgctgaagctggcc 104 |||||| ||| || |||||||||||||||||||| Sbjct: 81 gcagggccacgtcacgccgatgctgaagctggcc 114
>ref|XM_471830.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1428 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 71 gcaggggcacatcgcgccgatgctgaagctggcc 104 |||||| ||| || |||||||||||||||||||| Sbjct: 81 gcagggccacgtcacgccgatgctgaagctggcc 114
>ref|XM_465200.1| Oryza sativa (japonica cultivar-group), mRNA Length = 762 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 208 tcccgggcttccgcttcgccaccatccccgacgg 241 ||||||| |||| ||||||||||||||| ||||| Sbjct: 563 tcccggggttccacttcgccaccatcccggacgg 596
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 71 gcaggggcacatcgcgccgatgctgaagctggcc 104 |||||| ||| || |||||||||||||||||||| Sbjct: 19285660 gcagggccacgtcacgccgatgctgaagctggcc 19285693
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 71 gcaggggcacatcgcgccgatgctgaagctggcc 104 |||||| ||| || |||||||||||||||||||| Sbjct: 84343 gcagggccacgtcacgccgatgctgaagctggcc 84376 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Minus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||| |||||| Sbjct: 41115 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgacgctggcg 41056 Query: 105 aagct 109 ||||| Sbjct: 41055 aagct 41051
>dbj|AP005607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_D08 Length = 88854 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 208 tcccgggcttccgcttcgccaccatccccgacgg 241 ||||||| |||| ||||||||||||||| ||||| Sbjct: 70466 tcccggggttccacttcgccaccatcccggacgg 70499
>dbj|AP004845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1233_A01 Length = 98378 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 208 tcccgggcttccgcttcgccaccatccccgacgg 241 ||||||| |||| ||||||||||||||| ||||| Sbjct: 9030 tcccggggttccacttcgccaccatcccggacgg 9063
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 71 gcaggggcacatcgcgccgatgctgaagctggcc 104 |||||| ||| || |||||||||||||||||||| Sbjct: 15103 gcagggccacgtcacgccgatgctgaagctggcc 15136
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 71 gcaggggcacatcgcgccgatgctgaagctggcc 104 |||||| ||| || |||||||||||||||||||| Sbjct: 58673 gcagggccacgtcacgccgatgctgaagctggcc 58706
>ref|XM_471827.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||| |||||| Sbjct: 37 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgacgctggcg 96 Query: 105 aagct 109 ||||| Sbjct: 97 aagct 101
>ref|XM_516515.1| PREDICTED: Pan troglodytes similar to polybromo-1D (LOC460430), mRNA Length = 4779 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 160 cttcaagaagctgctccagga 140
>ref|XM_580991.2| PREDICTED: Bos taurus similar to polybromo 1 isoform 2 (LOC504816), mRNA Length = 1074 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 346 cttcaagaagctgctccagga 326
>gb|BC116450.1| Homo sapiens cDNA clone IMAGE:7962011, containing frame-shift errors Length = 4989 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 592 cttcaagaagctgctccagga 572
>ref|XM_957523.1| Neurospora crassa OR74A DYNEIN HEAVY CHAIN, CYTOSOLIC (DYHC) (NCU06976.1) partial mRNA Length = 13104 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 aagaagctgctccaggagctcaacg 348 |||||||||||||||| |||||||| Sbjct: 11275 aagaagctgctccaggcgctcaacg 11299
>ref|XM_327261.1| Neurospora crassa OR74A DYNEIN HEAVY CHAIN, CYTOSOLIC (DYHC) (NCU06976.1) partial mRNA Length = 13104 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 aagaagctgctccaggagctcaacg 348 |||||||||||||||| |||||||| Sbjct: 11275 aagaagctgctccaggcgctcaacg 11299
>ref|NM_018165.3| Homo sapiens polybromo 1 (PB1), transcript variant 1, mRNA Length = 7508 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>ref|XM_980312.1| PREDICTED: Mus musculus polybromo 1, transcript variant 1 (Pb1), mRNA Length = 4113 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980453.1| PREDICTED: Mus musculus polybromo 1, transcript variant 5 (Pb1), mRNA Length = 7654 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980353.1| PREDICTED: Mus musculus polybromo 1, transcript variant 2 (Pb1), mRNA Length = 7750 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980420.1| PREDICTED: Mus musculus polybromo 1, transcript variant 4 (Pb1), mRNA Length = 7750 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980516.1| PREDICTED: Mus musculus polybromo 1, transcript variant 7 (Pb1), mRNA Length = 7810 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980691.1| PREDICTED: Mus musculus polybromo 1, transcript variant 12 (Pb1), mRNA Length = 7975 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980648.1| PREDICTED: Mus musculus polybromo 1, transcript variant 11 (Pb1), mRNA Length = 8071 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980547.1| PREDICTED: Mus musculus polybromo 1, transcript variant 8 (Pb1), mRNA Length = 8020 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_980611.1| PREDICTED: Mus musculus polybromo 1, transcript variant 10 (Pb1), mRNA Length = 7909 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 819 cttcaagaagctgctccagga 799
>ref|XM_980578.1| PREDICTED: Mus musculus polybromo 1, transcript variant 9 (Pb1), mRNA Length = 8069 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 979 cttcaagaagctgctccagga 959
>ref|XM_980484.1| PREDICTED: Mus musculus polybromo 1, transcript variant 6 (Pb1), mRNA Length = 8116 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_898473.2| PREDICTED: Mus musculus polybromo 1, transcript variant 3 (Pb1), mRNA Length = 4113 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_982426.1| PREDICTED: Mus musculus polybromo 1, transcript variant 18 (Pb1), mRNA Length = 7655 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_982332.1| PREDICTED: Mus musculus polybromo 1, transcript variant 16 (Pb1), mRNA Length = 7751 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_982397.1| PREDICTED: Mus musculus polybromo 1, transcript variant 17 (Pb1), mRNA Length = 7751 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_982539.1| PREDICTED: Mus musculus polybromo 1, transcript variant 19 (Pb1), mRNA Length = 7811 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_982679.1| PREDICTED: Mus musculus polybromo 1, transcript variant 20 (Pb1), mRNA Length = 7976 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_898533.2| PREDICTED: Mus musculus polybromo 1, transcript variant 11 (Pb1), mRNA Length = 8021 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_898551.2| PREDICTED: Mus musculus polybromo 1, transcript variant 14 (Pb1), mRNA Length = 7910 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 819 cttcaagaagctgctccagga 799
>ref|XM_898555.2| PREDICTED: Mus musculus polybromo 1, transcript variant 15 (Pb1), mRNA Length = 8070 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 979 cttcaagaagctgctccagga 959
>ref|XM_889384.2| PREDICTED: Mus musculus polybromo 1, transcript variant 2 (Pb1), mRNA Length = 8072 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_619217.3| PREDICTED: Mus musculus polybromo 1, transcript variant 1 (Pb1), mRNA Length = 8117 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_921805.2| PREDICTED: Mus musculus polybromo 1, transcript variant 17 (Pb1), mRNA Length = 4113 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_983908.1| PREDICTED: Mus musculus polybromo 1, transcript variant 33 (Pb1), mRNA Length = 7655 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_983789.1| PREDICTED: Mus musculus polybromo 1, transcript variant 31 (Pb1), mRNA Length = 7751 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_983870.1| PREDICTED: Mus musculus polybromo 1, transcript variant 32 (Pb1), mRNA Length = 7751 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_983981.1| PREDICTED: Mus musculus polybromo 1, transcript variant 34 (Pb1), mRNA Length = 7811 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_984143.1| PREDICTED: Mus musculus polybromo 1, transcript variant 35 (Pb1), mRNA Length = 7976 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_921875.2| PREDICTED: Mus musculus polybromo 1, transcript variant 26 (Pb1), mRNA Length = 8021 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_921896.2| PREDICTED: Mus musculus polybromo 1, transcript variant 29 (Pb1), mRNA Length = 7910 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 819 cttcaagaagctgctccagga 799
>ref|XM_921905.2| PREDICTED: Mus musculus polybromo 1, transcript variant 30 (Pb1), mRNA Length = 8070 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 979 cttcaagaagctgctccagga 959
>ref|XM_910948.2| PREDICTED: Mus musculus polybromo 1, transcript variant 16 (Pb1), mRNA Length = 8072 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_921867.2| PREDICTED: Mus musculus polybromo 1, transcript variant 25 (Pb1), mRNA Length = 8117 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 885 cttcaagaagctgctccagga 865
>ref|XM_853988.1| PREDICTED: Canis familiaris similar to polybromo 1 isoform 4, transcript variant 5 (LOC476593), mRNA Length = 6507 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 890 cttcaagaagctgctccagga 870
>ref|XM_844456.1| PREDICTED: Canis familiaris similar to polybromo 1 isoform 4, transcript variant 3 (LOC476593), mRNA Length = 6370 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 753 cttcaagaagctgctccagga 733
>gb|AF225872.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively spliced Length = 4825 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>gb|AF225871.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively spliced Length = 4766 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>gb|AF225870.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively spliced Length = 4885 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>gb|AF177387.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively spliced Length = 4981 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>ref|NM_018313.3| Homo sapiens polybromo 1 (PB1), transcript variant 2, mRNA Length = 7545 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 674 cttcaagaagctgctccagga 654
>ref|NM_181042.2| Homo sapiens polybromo 1 (PB1), transcript variant 4, mRNA Length = 7448 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 577 cttcaagaagctgctccagga 557
>gb|BC115011.1| Homo sapiens polybromo 1, mRNA (cDNA clone MGC:131579 IMAGE:7962010), complete cds Length = 4996 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 593 cttcaagaagctgctccagga 573
>gb|BC115009.1| Homo sapiens polybromo 1, mRNA (cDNA clone MGC:131576 IMAGE:7962003), complete cds Length = 4402 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 592 cttcaagaagctgctccagga 572
>gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, complete sequence Length = 217029 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 199815 cttcaagaagctgctccagga 199835
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 gttggtgccgttgccgcagca 73 ||||||||||||||||||||| Sbjct: 1625203 gttggtgccgttgccgcagca 1625183
>dbj|AK056541.1| Homo sapiens cDNA FLJ31979 fis, clone NT2RP7008441, highly similar to Polybromo 1 protein Length = 3256 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 406 cttcaagaagctgctccagga 386
>gb|BC023452.1| Mus musculus polybromo 1, mRNA (cDNA clone IMAGE:5029043), containing frame-shift errors Length = 1436 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 853 cttcaagaagctgctccagga 833
>gb|BC029037.1| Mus musculus polybromo 1, mRNA (cDNA clone IMAGE:4946106), containing frame-shift errors Length = 2848 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 702 cttcaagaagctgctccagga 682
>gb|AC104446.2| Homo sapiens chromosome 3 clone RP11-447A21, complete sequence Length = 186734 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 111035 cttcaagaagctgctccagga 111055
>dbj|AK166588.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0032E15 product:POLYBROMO-1 homolog (Fragment) homolog [Mus musculus], full insert sequence Length = 3140 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 980 cttcaagaagctgctccagga 960
>dbj|AK165182.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length enriched library, clone:E970005H16 product:POLYBROMO-1 homolog (Fragment) homolog [Mus musculus], full insert sequence Length = 3020 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 886 cttcaagaagctgctccagga 866
>gb|AC154446.2| Mus musculus BAC clone RP24-181E7 from chromosome 14, complete sequence Length = 163771 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 781 cttcaagaagctgctccagga 761
>dbj|AK030781.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730600B02 product:POLYBROMO-1 homolog [Homo sapiens], full insert sequence Length = 3015 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 833 cttcaagaagctgctccagga 813
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 217 tccgcttcgccaccatccccgacgg 241 ||||||||||||||||| ||||||| Sbjct: 19901883 tccgcttcgccaccatctccgacgg 19901907
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 accttcgtccacaccgagtacaacc 162 ||||||||||||||||||| ||||| Sbjct: 25687500 accttcgtccacaccgagttcaacc 25687524
>gb|AF197569.1|AF197569 Homo sapiens BAF180 (BAF180) mRNA, complete cds Length = 5070 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 670 cttcaagaagctgctccagga 650
>gb|AY281068.1| Homo sapiens polybromo-1D (PB1) mRNA, complete cds Length = 5145 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 576 cttcaagaagctgctccagga 556
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 accttcgtccacaccgagtacaacc 162 ||||||||||||||||||| ||||| Sbjct: 141473 accttcgtccacaccgagttcaacc 141497
>dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0217C03 Length = 58309 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 217 tccgcttcgccaccatccccgacgg 241 ||||||||||||||||| ||||||| Sbjct: 8969 tccgcttcgccaccatctccgacgg 8993
>dbj|AK119530.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C07, full insert sequence Length = 1673 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||| |||||| Sbjct: 132 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgacgctggcg 191 Query: 105 aagct 109 ||||| Sbjct: 192 aagct 196
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 accttcgtccacaccgagtacaacc 162 ||||||||||||||||||| ||||| Sbjct: 4662 accttcgtccacaccgagttcaacc 4686
>dbj|AK105966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E07, full insert sequence Length = 1665 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||| |||||| Sbjct: 129 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgacgctggcg 188 Query: 105 aagct 109 ||||| Sbjct: 189 aagct 193
>dbj|AK105783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G07, full insert sequence Length = 1640 Score = 42.1 bits (21), Expect = 1.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 45 cacgcagtgttggtgccgttgccgcagcaggggcacatcgcgccgatgctgaagctggcc 104 ||||| ||| ||||||||| ||| |||||| ||| || |||||||||||| |||||| Sbjct: 73 cacgccgtgatggtgccgtacccggcgcagggccacgtcacgccgatgctgacgctggcg 132 Query: 105 aagct 109 ||||| Sbjct: 133 aagct 137
>dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O03, full insert sequence Length = 1843 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 217 tccgcttcgccaccatccccgacgg 241 ||||||||||||||||| ||||||| Sbjct: 244 tccgcttcgccaccatctccgacgg 268
>gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, complete sequence Length = 189907 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 cttcaagaagctgctccagga 340 ||||||||||||||||||||| Sbjct: 146702 cttcaagaagctgctccagga 146682
>gb|U59450.1|SVU59450 Streptomyces viridochromogenes rRNA (adenine-N6-)-methyltransferase (ermSV) gene, complete cds Length = 1300 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ggccccggagccctgaccggc 206 ||||||||||||||||||||| Sbjct: 250 ggccccggagccctgaccggc 270
>gb|L31504.1|NEURO1DHC Neurospora crassa cytoplasmic dynein heavy chain (ro-1) gene, complete cds Length = 14313 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 aagaagctgctccaggagctcaacg 348 |||||||||||||||| |||||||| Sbjct: 11513 aagaagctgctccaggcgctcaacg 11537
>dbj|AB070753.1| Vigna angularis AdGt-10 mRNA for glucosyltransferase-10, complete cds Length = 1652 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 216 ttccgcttcgccaccatccccgacgggct 244 |||||||||| ||||||||||||||||| Sbjct: 220 ttccgcttcgaaaccatccccgacgggct 248
>ref|NM_188270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1782 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgccgatgctgaagctggcc 104 |||||||||||||||||||| Sbjct: 1378 cgccgatgctgaagctggcc 1359
>ref|XM_322125.1| Neurospora crassa OR74A hypothetical protein (NCU00040.1) partial mRNA Length = 3180 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 caagaagctgctccaggagc 342 |||||||||||||||||||| Sbjct: 1887 caagaagctgctccaggagc 1906
>ref|XM_951058.1| Neurospora crassa OR74A hypothetical protein (NCU00040.1) partial mRNA Length = 3180 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 caagaagctgctccaggagc 342 |||||||||||||||||||| Sbjct: 1887 caagaagctgctccaggagc 1906
>emb|Z97206.1|HS359N14 Human DNA sequence from clone RP3-359N14 on chromosome 6q16.3-21 Contains a novel gene and a chromatin assembly factor 1 p60 subunit (CHAF1B) pseudogene, complete sequence Length = 136299 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 agatggagatggagaggaag 41 |||||||||||||||||||| Sbjct: 66158 agatggagatggagaggaag 66177
>emb|AL158812.10| Human DNA sequence from clone RP11-157E11 on chromosome 13, complete sequence Length = 173538 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 ggccaagctccttcactgca 120 |||||||||||||||||||| Sbjct: 132133 ggccaagctccttcactgca 132114
>gb|AC068911.38| Mus musculus strain 129/Sv chromosome 2 clone ct7-161k20, complete sequence Length = 158450 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 ccaagagccggcaagatggagatggaga 36 |||||||| || |||||||||||||||| Sbjct: 8785 ccaagagctgggaagatggagatggaga 8812
>emb|AL954375.6| Mouse DNA sequence from clone RP23-16F14 on chromosome 2, complete sequence Length = 172487 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 ccaagagccggcaagatggagatggaga 36 |||||||| || |||||||||||||||| Sbjct: 39215 ccaagagctgggaagatggagatggaga 39242
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgccgatgctgaagctggcc 104 |||||||||||||||||||| Sbjct: 5386724 cgccgatgctgaagctggcc 5386705
>gb|AC018488.7|AC018488 Drosophila melanogaster, chromosome X, region 13A-13B, BAC clone BACR09F03, complete sequence Length = 165118 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 agatggagatggagaggaagcctc 45 ||||||||||||||| |||||||| Sbjct: 126862 agatggagatggagatgaagcctc 126839
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgccgatgctgaagctggcc 104 |||||||||||||||||||| Sbjct: 138068 cgccgatgctgaagctggcc 138049
>ref|XM_341602.2| PREDICTED: Rattus norvegicus similar to ARF-GAP, RHO-GAP, ankyrin repeat and pleckstrin homology domains-containing protein 3; dual-specificity Rho- and Arf-GTPase activating protein 1 (predicted) (LOC361314), mRNA Length = 4275 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agctgctccaggagctcaac 347 |||||||||||||||||||| Sbjct: 4091 agctgctccaggagctcaac 4110
>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1476_F05 Length = 125426 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 72 caggggcacatcgcgccgatgctgaagc 99 |||||||||||| |||||||| |||||| Sbjct: 32993 caggggcacatcacgccgatgatgaagc 32966
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 72 caggggcacatcgcgccgatgctgaagc 99 |||||||||||| |||||||| |||||| Sbjct: 131919 caggggcacatcacgccgatgatgaagc 131892
>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete sequence Length = 341520 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 agatggagatggagaggaagcctc 45 ||||||||||||||| |||||||| Sbjct: 127617 agatggagatggagatgaagcctc 127594 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,570,262 Number of Sequences: 3902068 Number of extensions: 2570262 Number of successful extensions: 57733 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57221 Number of HSP's gapped (non-prelim): 491 length of query: 356 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 334 effective length of database: 17,147,199,772 effective search space: 5727164723848 effective search space used: 5727164723848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
