| Clone Name | bast34g06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY111955.1| Zea mays CL15209_1 mRNA sequence Length = 1667 Score = 141 bits (71), Expect = 2e-30 Identities = 152/179 (84%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgagcacgcggggcagaacccc 236 ||||| |||||||| || || ||||||||||||| ||| ||| | || | |||||||| Sbjct: 179 ggcagcaagaagatagtcggggtgttctacaaggccggggagtatgccgacaagaacccc 238 Query: 237 aacttcgttggttgcgtggagaacgcgctgggcatccgcagctggctcgagtcgcagggc 296 |||||||| || ||||| ||| || || ||||||||| |||||||||||||||||||| Sbjct: 239 aacttcgtcggctgcgtcgagggtgcactcggcatccgcggctggctcgagtcgcagggc 298 Query: 297 caccagtacatcgtcaccgacgacaaggacggccccaactgcgagctggagaagcacat 355 || |||||||| |||||||| |||||||| ||||||||||| || |||||||||||||| Sbjct: 299 catcagtacattgtcaccgatgacaaggaaggccccaactgtgaactggagaagcacat 357
>gb|BT016309.1| Zea mays clone Contig142 mRNA sequence Length = 1507 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgagcacgcggggcagaacccc 236 ||||| || ||||| || || ||||||||||||| ||| ||| | || | |||||||| Sbjct: 174 ggcagcaaaaagatagtcggggtgttctacaaggccggggagtatgccgacaagaacccc 233 Query: 237 aacttcgttggttgcgtggagaacgcgctgggcatccgcagctggctcgagtcgcagggc 296 |||||||| || ||||| ||| || || ||||||||| |||||||||||||||||||| Sbjct: 234 aacttcgtcggctgcgtcgagggtgcactcggcatccgcggctggctcgagtcgcagggc 293 Query: 297 caccagtacatcgtcaccgacgacaaggacggccccaactgcgagctggagaagcacat 355 || || ||||| |||||||| |||||||| ||||||||||| || |||||||||||||| Sbjct: 294 catcaatacattgtcaccgatgacaaggaaggccccaactgtgaactggagaagcacat 352
>dbj|AK104788.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E04, full insert sequence Length = 1637 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgagcacgcggggcagaacccc 236 ||||| |||||||||||||| ||||||||||||||||||||| |||| | |||| ||| Sbjct: 161 ggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaatccc 220 Query: 237 aacttcgttggttgcgtggagaacgcgctgggcatccgcagctggctcgagtcgcagggc 296 |||||||| || ||||||||| ||| || ||||||||| ||||| ||||| |||| Sbjct: 221 aacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaagggg 280 Query: 297 caccagtacatcgtcaccgacgacaaggacggccccaactgcgagctggagaagcacat 355 || || ||||| ||||||||||||||||| || | ||| ||||||||||||||||||| Sbjct: 281 catcactacattgtcaccgacgacaaggaggggctaaacagcgagctggagaagcacat 339
>dbj|AK065872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048A01, full insert sequence Length = 1648 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgagcacgcggggcagaacccc 236 ||||| |||||||||||||| ||||||||||||||||||||| |||| | |||| ||| Sbjct: 172 ggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaatccc 231 Query: 237 aacttcgttggttgcgtggagaacgcgctgggcatccgcagctggctcgagtcgcagggc 296 |||||||| || ||||||||| ||| || ||||||||| ||||| ||||| |||| Sbjct: 232 aacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaagggg 291 Query: 297 caccagtacatcgtcaccgacgacaaggacggccccaactgcgagctggagaagcacat 355 || || ||||| ||||||||||||||||| || | ||| ||||||||||||||||||| Sbjct: 292 catcactacattgtcaccgacgacaaggaggggctaaacagcgagctggagaagcacat 350
>dbj|AB019533.1| Oryza sativa mRNA for Nad-dependent formate dehydrogenase, complete cds Length = 1449 Score = 125 bits (63), Expect = 1e-25 Identities = 150/179 (83%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgagcacgcggggcagaacccc 236 ||||| |||||||||||||| ||||||||||||||||||||| |||| | |||| ||| Sbjct: 175 ggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaatccc 234 Query: 237 aacttcgttggttgcgtggagaacgcgctgggcatccgcagctggctcgagtcgcagggc 296 |||||||| || ||||||||| ||| || ||||||||| ||||| ||||| |||| Sbjct: 235 aacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaagggg 294 Query: 297 caccagtacatcgtcaccgacgacaaggacggccccaactgcgagctggagaagcacat 355 || || ||||| ||||||||||||||||| || | ||| ||||||||||||||||||| Sbjct: 295 catcactacattgtcaccgacgacaaggaggggctaaacagcgagctggagaagcacat 353
>dbj|D88272.1| Hordeum vulgare mRNA for formate dehydrogenase, complete cds Length = 1380 Score = 117 bits (59), Expect = 3e-23 Identities = 149/179 (83%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgagcacgcggggcagaacccc 236 ||||| ||||||||||| |||||||||||| ||| ||||||| |||| | |||||||| Sbjct: 149 ggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacaagaacccc 208 Query: 237 aacttcgttggttgcgtggagaacgcgctgggcatccgcagctggctcgagtcgcagggc 296 |||||||| || ||||| ||| || || ||||| ||| ||||||||||||| |||| Sbjct: 209 aacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtcgaagggg 268 Query: 297 caccagtacatcgtcaccgacgacaaggacggccccaactgcgagctggagaagcacat 355 ||||| ||||| ||||||||||||||||| || ||| ||||||||||||||||||| Sbjct: 269 caccactacattgtcaccgacgacaaggaggggtttaacagcgagctggagaagcacat 327
>gb|AF479036.1| Triticum aestivum formate dehydrogenase mRNA, partial cds Length = 801 Score = 105 bits (53), Expect = 1e-19 Identities = 149/181 (82%) Strand = Plus / Plus Query: 175 cgggcagaaagaagatcgtgggcgtgttctacaagggcggcgagcacgcggggcagaacc 234 ||||||| |||||||||||||||||||||||| ||| ||||||| |||| | |||||| Sbjct: 119 cgggcagcaagaagatcgtgggcgtgttctaccaggccggcgagtacgccgacaagaacc 178 Query: 235 ccaacttcgttggttgcgtggagaacgcgctgggcatccgcagctggctcgagtcgcagg 294 |||||||||| || || || ||| || || ||||| ||| |||||||||||| ||| Sbjct: 179 ccaacttcgtcggctgtgttgagggggccctcggcatacgcgactggctcgagtccaagg 238 Query: 295 gccaccagtacatcgtcaccgacgacaaggacggccccaactgcgagctggagaagcaca 354 | || || ||||| ||||||||||||||||| || ||| |||||||||||||||||| Sbjct: 239 ggcatcactacattgtcaccgacgacaaggaggggttgaacagcgagctggagaagcaca 298 Query: 355 t 355 | Sbjct: 299 t 299
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgagcacgcggggcagaacccc 236 ||||| |||||||||||||| ||||||||||||||||||||| |||| | |||| ||| Sbjct: 16431990 ggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaatccc 16432049 Query: 237 aacttcgttggttgcgtggagaacgcgctgggcatccgcagctggctcgagtcgcagggc 296 |||||||| || ||||||||| ||| || ||||||||| ||||| ||||| |||| Sbjct: 16432050 aacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaagggg 16432109 Query: 297 caccagtacatcgtcaccgacgacaagga 325 || || ||||| ||||||||||||||||| Sbjct: 16432110 catcactacattgtcaccgacgacaagga 16432138 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgag 218 ||||| |||||| ||||||| |||||||||||||| |||||| Sbjct: 16461804 ggcagcaagaaggtcgtgggtgtgttctacaagggtggcgag 16461845 Score = 40.1 bits (20), Expect = 5.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggcggacgcgcacgtgctcatcatcacgccgttccaccc 394 ||||||||||||||||| | ||| || ||||| || |||| ||| || |||||||| Sbjct: 16462620 gagctggagaagcacatcgaggatgcccacgtcctgatcaccaccccattccaccc 16462675
>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0404G03 Length = 135225 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgagcacgcggggcagaacccc 236 ||||| |||||||||||||| ||||||||||||||||||||| |||| | |||| ||| Sbjct: 41308 ggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaatccc 41367 Query: 237 aacttcgttggttgcgtggagaacgcgctgggcatccgcagctggctcgagtcgcagggc 296 |||||||| || ||||||||| ||| || ||||||||| ||||| ||||| |||| Sbjct: 41368 aacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaagggg 41427 Query: 297 caccagtacatcgtcaccgacgacaagga 325 || || ||||| ||||||||||||||||| Sbjct: 41428 catcactacattgtcaccgacgacaagga 41456 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgag 218 ||||| |||||| ||||||| |||||||||||||| |||||| Sbjct: 71122 ggcagcaagaaggtcgtgggtgtgttctacaagggtggcgag 71163 Score = 40.1 bits (20), Expect = 5.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggcggacgcgcacgtgctcatcatcacgccgttccaccc 394 ||||||||||||||||| | ||| || ||||| || |||| ||| || |||||||| Sbjct: 71938 gagctggagaagcacatcgaggatgcccacgtcctgatcaccaccccattccaccc 71993
>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0008F02 Length = 139655 Score = 105 bits (53), Expect = 1e-19 Identities = 125/149 (83%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgagcacgcggggcagaacccc 236 ||||| |||||||||||||| ||||||||||||||||||||| |||| | |||| ||| Sbjct: 108553 ggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaatccc 108612 Query: 237 aacttcgttggttgcgtggagaacgcgctgggcatccgcagctggctcgagtcgcagggc 296 |||||||| || ||||||||| ||| || ||||||||| ||||| ||||| |||| Sbjct: 108613 aacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaagggg 108672 Query: 297 caccagtacatcgtcaccgacgacaagga 325 || || ||||| ||||||||||||||||| Sbjct: 108673 catcactacattgtcaccgacgacaagga 108701 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgag 218 ||||| |||||| ||||||| |||||||||||||| |||||| Sbjct: 138367 ggcagcaagaaggtcgtgggtgtgttctacaagggtggcgag 138408 Score = 40.1 bits (20), Expect = 5.5 Identities = 47/56 (83%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggcggacgcgcacgtgctcatcatcacgccgttccaccc 394 ||||||||||||||||| | ||| || ||||| || |||| ||| || |||||||| Sbjct: 139183 gagctggagaagcacatcgaggatgcccacgtcctgatcaccaccccattccaccc 139238
>dbj|AK064610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B06, full insert sequence Length = 1872 Score = 67.9 bits (34), Expect = 2e-08 Identities = 172/218 (78%) Strand = Plus / Plus Query: 177 ggcagaaagaagatcgtgggcgtgttctacaagggcggcgagcacgcggggcagaacccc 236 ||||| |||||| ||||||| |||||||||||||| ||| || | || | |||| ||| Sbjct: 630 ggcagcaagaaggtcgtgggtgtgttctacaagggtggcaagtatgccgacaagaatccc 689 Query: 237 aacttcgttggttgcgtggagaacgcgctgggcatccgcagctggctcgagtcgcagggc 296 |||||||| || ||||| || ||| || ||||| ||| ||||||| || || |||| Sbjct: 690 aacttcgtcggctgcgtcgactccgctctcggcattcgcggctggcttgaatctaagggg 749 Query: 297 caccagtacatcgtcaccgacgacaaggacggccccaactgcgagctggagaagcacatg 356 || | ||||| |||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 750 catcgctacattgtcaccgatgacaaggaggggataaactgcgagctggagaagcacatc 809 Query: 357 gcggacgcgcacgtgctcatcatcacgccgttccaccc 394 | ||| || ||||| || |||| ||| || |||||||| Sbjct: 810 gaggatgcccacgtcctgatcaccaccccattccaccc 847
>ref|XM_500012.1| Yarrowia lipolytica CLIB122, YALI0A12353g predicted mRNA Length = 1107 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 278 ctggctcgagtcgcagggccac 299 |||||||||||||||||||||| Sbjct: 96 ctggctcgagtcgcagggccac 117
>dbj|AB071373.1| Paracoccus sp. 12-A fdh gene for NAD-dependent formate dehydrogenase, complete cds Length = 1455 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Plus Query: 320 caaggacggccccaactgcgagctggagaagcac 353 ||||||||||||| || |||||||||| |||||| Sbjct: 458 caaggacggccccgacagcgagctggaaaagcac 491
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 278 ctggctcgagtcgcagggccac 299 |||||||||||||||||||||| Sbjct: 1288546 ctggctcgagtcgcagggccac 1288567
>ref|XM_368597.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00647.4) partial mRNA Length = 1494 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 338 cgagctggagaagcacatggcggac 362 |||||||||||||| |||||||||| Sbjct: 1380 cgagctggagaagcgcatggcggac 1404
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 gtggagaacgcgctgggcatccgca 276 |||||| |||||||||||||||||| Sbjct: 1414040 gtggaggacgcgctgggcatccgca 1414016
>emb|BX021470.1|CNS08OQA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA31DD02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1052 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggcggacgcgca 367 |||||| |||||||||||||||| ||||| Sbjct: 696 gagctgaagaagcacatggcggaggcgca 724
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 302 gtacatcgtcaccgacgacaaggac 326 |||||||| |||||||||||||||| Sbjct: 3207683 gtacatcgacaccgacgacaaggac 3207659
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 atcgtcaccgacgacaaggacggcc 330 ||||||||||||||||||| ||||| Sbjct: 1343078 atcgtcaccgacgacaagggcggcc 1343102
>ref|XM_315544.2| Anopheles gambiae str. PEST ENSANGP00000021228 (ENSANGG00000018739), mRNA Length = 1836 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggcggacgcgca 367 |||||| |||||||||||||||| ||||| Sbjct: 704 gagctgaagaagcacatggcggaggcgca 732
>ref|NM_121482.2| Arabidopsis thaliana FDH (FORMATE DEHYDROGENASE); oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor AT5G14780 (FDH) mRNA, complete cds Length = 1518 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 cagtacatcgtcaccgacgacaaggacggccc 331 |||||||||||||| || |||||||| ||||| Sbjct: 282 cagtacatcgtcactgatgacaaggaaggccc 313
>ref|XM_991888.1| PREDICTED: Mus musculus ribosome binding protein 1 (Rrbp1), mRNA Length = 5431 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggc 358 |||||||||||||||||||| Sbjct: 4324 gagctggagaagcacatggc 4343
>ref|XM_622097.3| PREDICTED: Mus musculus ribosome binding protein 1, transcript variant 1 (Rrbp1), mRNA Length = 5443 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggc 358 |||||||||||||||||||| Sbjct: 4336 gagctggagaagcacatggc 4355
>ref|XM_918338.2| PREDICTED: Mus musculus ribosome binding protein 1, transcript variant 5 (Rrbp1), mRNA Length = 5371 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggc 358 |||||||||||||||||||| Sbjct: 4264 gagctggagaagcacatggc 4283
>gb|AF192329.1| Enterococcus faecalis transposon Tn1549, complete sequence Length = 33805 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 cagtacatcgtcaccgacgacaag 323 |||||||||||| ||||||||||| Sbjct: 12359 cagtacatcgtccccgacgacaag 12382
>ref|XM_501224.1| Yarrowia lipolytica CLIB122, YALI0B22506g predicted mRNA Length = 1101 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 255 gagaacgcgctgggcatccgcagctggctcgagtcgcagggcca 298 ||||||| ||| |||||||| |||||||||||| |||||||| Sbjct: 73 gagaacgagctcggcatccgatcctggctcgagtcccagggcca 116
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 362 cgcgcacgtgctcatcatcacgccgttc 389 ||||||| || ||||||||||||||||| Sbjct: 2533656 cgcgcacatgatcatcatcacgccgttc 2533683
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 catcgtcaccgacgacaagg 324 |||||||||||||||||||| Sbjct: 1060147 catcgtcaccgacgacaagg 1060166
>gb|AC063952.15| Homo sapiens 3 BAC RP11-174O3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152024 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tccactcgcagcagcagcac 27 |||||||||||||||||||| Sbjct: 122603 tccactcgcagcagcagcac 122622
>emb|AL391149.1|ATT9L3 Arabidopsis thaliana DNA chromosome 5, BAC clone T9L3 (ESSA project) Length = 89370 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 cagtacatcgtcaccgacgacaaggacggccc 331 |||||||||||||| || |||||||| ||||| Sbjct: 45013 cagtacatcgtcactgatgacaaggaaggccc 45044
>gb|AC010536.8| Homo sapiens chromosome 16 clone RP11-278A23, complete sequence Length = 208236 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gcagcagcagcactgcacca 34 |||||||||||||||||||| Sbjct: 30732 gcagcagcagcactgcacca 30713
>gb|AY081734.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1155 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 cagtacatcgtcaccgacgacaaggacggccc 331 |||||||||||||| || |||||||| ||||| Sbjct: 223 cagtacatcgtcactgatgacaaggaaggccc 254
>gb|AF208029.1|AF208029 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1B (FDH1B) mRNA, complete cds Length = 1508 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 cagtacatcgtcaccgacgacaaggacggccc 331 |||||||||||||| || |||||||| ||||| Sbjct: 272 cagtacatcgtcactgatgacaaggaaggccc 303
>gb|AF208028.1|AF208028 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1A (FDH1A) mRNA, complete cds Length = 1439 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 cagtacatcgtcaccgacgacaaggacggccc 331 |||||||||||||| || |||||||| ||||| Sbjct: 280 cagtacatcgtcactgatgacaaggaaggccc 311
>gb|AY054285.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1494 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 cagtacatcgtcaccgacgacaaggacggccc 331 |||||||||||||| || |||||||| ||||| Sbjct: 278 cagtacatcgtcactgatgacaaggaaggccc 309
>dbj|AK019964.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730465C04 product:ribosome binding protein 1, full insert sequence Length = 3110 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggc 358 |||||||||||||||||||| Sbjct: 2003 gagctggagaagcacatggc 2022
>gb|AY039609.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1443 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 cagtacatcgtcaccgacgacaaggacggccc 331 |||||||||||||| || |||||||| ||||| Sbjct: 282 cagtacatcgtcactgatgacaaggaaggccc 313
>emb|AL929550.7| Mouse DNA sequence from clone RP23-77A2 on chromosome 2, complete sequence Length = 80734 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gagctggagaagcacatggc 358 |||||||||||||||||||| Sbjct: 13894 gagctggagaagcacatggc 13875
>dbj|AB023897.1| Arabidopsis thaliana fdh mRNA for formate dehydrogenase, complete cds Length = 1381 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 cagtacatcgtcaccgacgacaaggacggccc 331 |||||||||||||| || |||||||| ||||| Sbjct: 223 cagtacatcgtcactgatgacaaggaaggccc 254
>gb|AF217195.1|AF217195 Arabidopsis thaliana formate dehydrogenase (FDH) mRNA, complete cds Length = 1490 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 cagtacatcgtcaccgacgacaaggacggccc 331 |||||||||||||| || |||||||| ||||| Sbjct: 282 cagtacatcgtcactgatgacaaggaaggccc 313
>ref|NM_001003179.1| Canis familiaris ribosome receptor (P180), mRNA Length = 5425 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggc 358 |||||||||||||||||||| Sbjct: 4240 gagctggagaagcacatggc 4259
>gb|AY089191.1| Arabidopsis thaliana clone 7530 mRNA, complete sequence Length = 1514 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 300 cagtacatcgtcaccgacgacaaggacggccc 331 |||||||||||||| || |||||||| ||||| Sbjct: 282 cagtacatcgtcactgatgacaaggaaggccc 313
>ref|XM_230637.3| PREDICTED: Rattus norvegicus ribosome binding protein 1 homolog 180kDa (dog) (predicted) (Rrbp1_predicted), mRNA Length = 4826 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggc 358 |||||||||||||||||||| Sbjct: 3715 gagctggagaagcacatggc 3734
>dbj|AK129349.1| Mus musculus mRNA for mKIAA1398 protein Length = 2911 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggc 358 |||||||||||||||||||| Sbjct: 1805 gagctggagaagcacatggc 1824
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 255 gagaacgcgctgggcatccgcagctggctcgagtcgcagggcca 298 ||||||| ||| |||||||| |||||||||||| |||||||| Sbjct: 2963241 gagaacgagctcggcatccgatcctggctcgagtcccagggcca 2963198
>emb|X87224.1|CFP180RRC Canis familiaris mRNA for ribosome receptor, p180 Length = 5425 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gagctggagaagcacatggc 358 |||||||||||||||||||| Sbjct: 4240 gagctggagaagcacatggc 4259 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,047,318 Number of Sequences: 3902068 Number of extensions: 3047318 Number of successful extensions: 51596 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51178 Number of HSP's gapped (non-prelim): 413 length of query: 411 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 389 effective length of database: 17,147,199,772 effective search space: 6670260711308 effective search space used: 6670260711308 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)