ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast34f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC135927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B02, complete sequence Length = 146435 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 224 ggcggccgcggcggtggctgggccccgtgggcgcgcacctggcgtcggggtcctggacgc 283 ||||| |||||||||||||||| | ||||| |||||||||||||| ||||| ||||||| Sbjct: 99988 ggcgggcgcggcggtggctggggacggtgggggcgcacctggcgtccgggtcgtggacgc 100047 Query: 284 tgagccgcgagcagggcaacaagctgctggccagccggttccgcggcgaccggctgtaca 343 ||||| | ||||| || |||||||||||||| ||| |||||||||||||||| || |||| Sbjct: 100048 tgagcagggagcaagggaacaagctgctggcgagcaggttccgcggcgaccgcctctaca 100107 Query: 344 t 344 | Sbjct: 100108 t 100108 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 71 cgtggtccctctacgatgacctgtacctggacgcggcctacgactgctcc 120 ||||||| |||||||| ||||| ||||| ||| | ||||||||||||||| Sbjct: 99853 cgtggtcgctctacgacgacctctacctcgacaccgcctacgactgctcc 99902
>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10, complete sequence Length = 159672 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 224 ggcggccgcggcggtggctgggccccgtgggcgcgcacctggcgtcggggtcctggacgc 283 ||||| |||||||||||||||| | ||||| |||||||||||||| ||||| ||||||| Sbjct: 151247 ggcgggcgcggcggtggctggggacggtgggggcgcacctggcgtccgggtcgtggacgc 151306 Query: 284 tgagccgcgagcagggcaacaagctgctggccagccggttccgcggcgaccggctgtaca 343 ||||| | ||||| || |||||||||||||| ||| |||||||||||||||| || |||| Sbjct: 151307 tgagcagggagcaagggaacaagctgctggcgagcaggttccgcggcgaccgcctctaca 151366 Query: 344 t 344 | Sbjct: 151367 t 151367 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 71 cgtggtccctctacgatgacctgtacctggacgcggcctacgactgctcc 120 ||||||| |||||||| ||||| ||||| ||| | ||||||||||||||| Sbjct: 151112 cgtggtcgctctacgacgacctctacctcgacaccgcctacgactgctcc 151161
>gb|AC121366.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111K12, complete sequence Length = 127901 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 224 ggcggccgcggcggtggctgggccccgtgggcgcgcacctggcgtcggggtcctggacgc 283 ||||| |||||||||||||||| | ||||| |||||||||||||| ||||| ||||||| Sbjct: 27829 ggcgggcgcggcggtggctggggacggtgggggcgcacctggcgtccgggtcgtggacgc 27888 Query: 284 tgagccgcgagcagggcaacaagctgctggccagccggttccgcggcgaccggctgtaca 343 ||||| | ||||| || |||||||||||||| ||| |||||||||||||||| || |||| Sbjct: 27889 tgagcagggagcaagggaacaagctgctggcgagcaggttccgcggcgaccgcctctaca 27948 Query: 344 t 344 | Sbjct: 27949 t 27949 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 71 cgtggtccctctacgatgacctgtacctggacgcggcctacgactgctcc 120 ||||||| |||||||| ||||| ||||| ||| | ||||||||||||||| Sbjct: 27694 cgtggtcgctctacgacgacctctacctcgacaccgcctacgactgctcc 27743
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 224 ggcggccgcggcggtggctgggccccgtgggcgcgcacctggcgtcggggtcctggacgc 283 ||||| |||||||||||||||| | ||||| |||||||||||||| ||||| ||||||| Sbjct: 17353935 ggcgggcgcggcggtggctggggacggtgggggcgcacctggcgtccgggtcgtggacgc 17353994 Query: 284 tgagccgcgagcagggcaacaagctgctggccagccggttccgcggcgaccggctgtaca 343 ||||| | ||||| || |||||||||||||| ||| |||||||||||||||| || |||| Sbjct: 17353995 tgagcagggagcaagggaacaagctgctggcgagcaggttccgcggcgaccgcctctaca 17354054 Query: 344 t 344 | Sbjct: 17354055 t 17354055 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 71 cgtggtccctctacgatgacctgtacctggacgcggcctacgactgctcc 120 ||||||| |||||||| ||||| ||||| ||| | ||||||||||||||| Sbjct: 17353800 cgtggtcgctctacgacgacctctacctcgacaccgcctacgactgctcc 17353849 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 cggcggccgcggcggtggctgggcc 247 ||||||| ||||||||||||||||| Sbjct: 20126794 cggcggcggcggcggtggctgggcc 20126818 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 23214760 cgccgccgcgcccgcgccgg 23214741
>ref|NM_153298.1| Rattus norvegicus sideroflexin 5 (Sfxn5), mRNA Length = 1083 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 cactggccgccgcggacgccgccg 70 |||||||||||||||||||||||| Sbjct: 86 cactggccgccgcggacgccgccg 63
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 48.1 bits (24), Expect = 0.019 Identities = 27/28 (96%) Strand = Plus / Minus Query: 131 tcgccgccgcgcccgcgccggccgcgga 158 |||||||||||||||| ||||||||||| Sbjct: 166393 tcgccgccgcgcccgccccggccgcgga 166366
>gb|AC084650.1|CBRG45N14 Caenorhabditis briggsae cosmid G45N14, complete sequence Length = 41442 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 157 gaggcagaggaggagaagccaccg 180 |||||||||||||||||||||||| Sbjct: 33134 gaggcagaggaggagaagccaccg 33111
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccggccgc 155 |||||||||||||||||||||||| Sbjct: 4855750 cgccgccgcgcccgcgccggccgc 4855727 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 cgccgccgcgcccgcgccggcc 153 |||||||||||||||||||||| Sbjct: 3385659 cgccgccgcgcccgcgccggcc 3385680 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 cgccgccgcgcccgcgccggcc 153 |||||||||||||||||||||| Sbjct: 2907184 cgccgccgcgcccgcgccggcc 2907205 Score = 44.1 bits (22), Expect = 0.29 Identities = 34/38 (89%) Strand = Plus / Minus Query: 120 cgagacgcaggtcgccgccgcgcccgcgccggccgcgg 157 |||||||||||| |||| ||||||||||| ||||||| Sbjct: 2086967 cgagacgcaggtgcccgcggcgcccgcgcccgccgcgg 2086930 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccggcc 153 |||||||||||||||||||||| Sbjct: 1157462 cgccgccgcgcccgcgccggcc 1157441 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccggccgcg 156 ||||||||||||||| ||||||||| Sbjct: 4221401 cgccgccgcgcccgcaccggccgcg 4221377 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 cgccgccgcgcccgcgccggccgcg 156 ||||||||||||| ||||||||||| Sbjct: 3602001 cgccgccgcgccctcgccggccgcg 3602025 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 132 cgccgccgcgcccgcgccggccgcggagg 160 |||||| ||||||||| |||||||||||| Sbjct: 3515071 cgccgcggcgcccgcggcggccgcggagg 3515099 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 gccgccgcgcccgcgccggcc 153 ||||||||||||||||||||| Sbjct: 2028571 gccgccgcgcccgcgccggcc 2028591 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 3546529 cgccgccgcgcccgcgccgg 3546510 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccgccgcgcccgcgccggcc 153 |||||||||||||||||||| Sbjct: 3387423 ccgccgcgcccgcgccggcc 3387442 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ccgccgcgcccgcgccggcc 153 |||||||||||||||||||| Sbjct: 3126660 ccgccgcgcccgcgccggcc 3126641 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cgcccgcgccggccgcggag 159 |||||||||||||||||||| Sbjct: 3004634 cgcccgcgccggccgcggag 3004615 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 acccgccggcggccgcggcg 236 |||||||||||||||||||| Sbjct: 823470 acccgccggcggccgcggcg 823489 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 135 cgccgcgcccgcgccggccgcggaggcagagg 166 ||||||||||||||| |||| |||||| |||| Sbjct: 152783 cgccgcgcccgcgcccgccgaggaggcggagg 152814
>dbj|AB056724.1| Rattus norvegicus BBG-TCC mRNA for tricarboxylate carrier, complete cds Length = 1100 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 cactggccgccgcggacgccgccg 70 |||||||||||||||||||||||| Sbjct: 103 cactggccgccgcggacgccgccg 80
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 46.1 bits (23), Expect = 0.074 Identities = 23/23 (100%) Strand = Plus / Plus Query: 135 cgccgcgcccgcgccggccgcgg 157 ||||||||||||||||||||||| Sbjct: 1465494 cgccgcgcccgcgccggccgcgg 1465516
>ref|NM_018083.3| Homo sapiens zinc finger protein 358 (ZNF358), mRNA Length = 1897 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 ccgccgcgcccgcgccggccgc 155 |||||||||||||||||||||| Sbjct: 36 ccgccgcgcccgcgccggccgc 15
>gb|AC155728.13| Mus musculus 6 BAC RP24-162H1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176377 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 cactggccgccgcggacgccgc 68 |||||||||||||||||||||| Sbjct: 27030 cactggccgccgcggacgccgc 27051
>ref|XM_978603.1| PREDICTED: Mus musculus sideroflexin 5 (Sfxn5), mRNA Length = 1310 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 cactggccgccgcggacgccgc 68 |||||||||||||||||||||| Sbjct: 56 cactggccgccgcggacgccgc 35
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 cgccgccgcgcccgcgccggcc 153 |||||||||||||||||||||| Sbjct: 191963 cgccgccgcgcccgcgccggcc 191984
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 131 tcgccgccgcgcccgcgccggccgcg 156 |||||||||||||||||| ||||||| Sbjct: 74746 tcgccgccgcgcccgcgcaggccgcg 74771
>emb|CR354750.1| Mus musculus chromosome 6, clone tr151 strain 129/Sv, complete sequence Length = 167508 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 cactggccgccgcggacgccgc 68 |||||||||||||||||||||| Sbjct: 15569 cactggccgccgcggacgccgc 15590
>gb|AC008878.10| Homo sapiens chromosome 19 clone CTD-2207O23, complete sequence Length = 173126 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 ccgccgcgcccgcgccggccgc 155 |||||||||||||||||||||| Sbjct: 130148 ccgccgcgcccgcgccggccgc 130127
>emb|CR623119.1| full-length cDNA clone CL0BB013ZB06 of Neuroblastoma of Homo sapiens (human) Length = 1101 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 ccgccgcgcccgcgccggccgc 155 |||||||||||||||||||||| Sbjct: 31 ccgccgcgcccgcgccggccgc 10
>dbj|AK036285.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630053M05 product:sideroflexin 5, full insert sequence Length = 1216 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 cactggccgccgcggacgccgc 68 |||||||||||||||||||||| Sbjct: 54 cactggccgccgcggacgccgc 33
>dbj|AK038793.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230063N01 product:sideroflexin 5, full insert sequence Length = 4478 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 cactggccgccgcggacgccgc 68 |||||||||||||||||||||| Sbjct: 57 cactggccgccgcggacgccgc 36
>dbj|AK043706.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830022I08 product:sideroflexin 5, full insert sequence Length = 1083 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 cactggccgccgcggacgccgc 68 |||||||||||||||||||||| Sbjct: 55 cactggccgccgcggacgccgc 34
>dbj|AK082073.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230001H08 product:sideroflexin 5, full insert sequence Length = 3648 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 cactggccgccgcggacgccgc 68 |||||||||||||||||||||| Sbjct: 54 cactggccgccgcggacgccgc 33
>gb|AF325264.1|AF325264 Mus musculus sideroflexin 5 (Sfxn5) precursor RNA, partial cds Length = 678 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 cactggccgccgcggacgccgc 68 |||||||||||||||||||||| Sbjct: 74 cactggccgccgcggacgccgc 53
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 ccggcggccgcggcggtggctg 243 |||||||||||||||||||||| Sbjct: 10760349 ccggcggccgcggcggtggctg 10760370 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ggccgccgcggacgccgccgc 71 ||||||||||||||||||||| Sbjct: 3119051 ggccgccgcggacgccgccgc 3119071 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccgccgcggacgccgccgcg 72 |||||||||||||||||||| Sbjct: 27301288 ccgccgcggacgccgccgcg 27301307
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 ccggcggccgcggcggtggctg 243 |||||||||||||||||||||| Sbjct: 57481 ccggcggccgcggcggtggctg 57502
>emb|AJ333506.1|HSA333506 Homo sapiens genomic sequence surrounding NotI site, clone NL6-EO12R Length = 578 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 ccgccgcgcccgcgccggccgc 155 |||||||||||||||||||||| Sbjct: 255 ccgccgcgcccgcgccggccgc 234
>gb|BC089588.1| Mus musculus cDNA clone IMAGE:30121913 Length = 607 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 cactggccgccgcggacgccgc 68 |||||||||||||||||||||| Sbjct: 56 cactggccgccgcggacgccgc 35
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 ccgccgcgcccgcgccggccgc 155 |||||||||||||||||||||| Sbjct: 68304 ccgccgcgcccgcgccggccgc 68325
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 131 tcgccgccgcgcccgcgccggccgcg 156 |||||||||||||||||||| ||||| Sbjct: 1754560 tcgccgccgcgcccgcgccgcccgcg 1754535 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 tcgccgccgcgcccgcgccg 150 |||||||||||||||||||| Sbjct: 3700680 tcgccgccgcgcccgcgccg 3700661
>ref|NM_178639.2| Mus musculus sideroflexin 5 (Sfxn5), mRNA Length = 3648 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 cactggccgccgcggacgccgc 68 |||||||||||||||||||||| Sbjct: 54 cactggccgccgcggacgccgc 33
>gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 229744 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 cactggccgccgcggacgccgc 68 |||||||||||||||||||||| Sbjct: 216757 cactggccgccgcggacgccgc 216778
>gb|M55641.1|RERPIG Rhodococcus pigment gene, complete cds Length = 2109 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 ctggccgccgcggacgccgccg 70 |||||||||||||||||||||| Sbjct: 1634 ctggccgccgcggacgccgccg 1655
>ref|XM_480151.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1803 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 ggccgccgcggacgccgccgc 71 ||||||||||||||||||||| Sbjct: 72 ggccgccgcggacgccgccgc 52
>ref|XM_527656.1| PREDICTED: Pan troglodytes similar to zinc finger type transcription factor MZF-3 (LOC472281), mRNA Length = 3519 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 140 cgcccgcgccggccgcggaggcagaggaggaga 172 ||||||||||||||||| ||| |||||||||| Sbjct: 2537 cgcccgcgccggccgcgctggcggaggaggaga 2569
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 cggcggccgcggcggtggctgggcc 247 ||||||| ||||||||||||||||| Sbjct: 15455 cggcggcggcggcggtggctgggcc 15479
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10, complete sequence Length = 149870 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 cggcggccgcggcggtggctgggcc 247 ||||||| ||||||||||||||||| Sbjct: 125119 cggcggcggcggcggtggctgggcc 125143
>gb|AC142101.4| Mus musculus BAC clone RP24-322G3 from chromosome 19, complete sequence Length = 210803 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 ggaggcagaggaggagaagcc 176 ||||||||||||||||||||| Sbjct: 140436 ggaggcagaggaggagaagcc 140456
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 gccgccgcggacgccgccgcg 72 ||||||||||||||||||||| Sbjct: 19839 gccgccgcggacgccgccgcg 19819
>emb|X62518.1|SCPKSGC S.curacoi polyketide synthase gene cluster Length = 5469 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ctggccgccgcggacgccgcc 69 ||||||||||||||||||||| Sbjct: 3330 ctggccgccgcggacgccgcc 3350
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 gccgcgcccgcgccggccgcg 156 ||||||||||||||||||||| Sbjct: 4126589 gccgcgcccgcgccggccgcg 4126609
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 cgccgcgcccgcgccggccgc 155 ||||||||||||||||||||| Sbjct: 292758 cgccgcgcccgcgccggccgc 292778
>emb|AJ543639.1|BPE543639 Bordetella pertussis smc gene Length = 3528 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 cgccgcgcccgcgccggccgc 155 ||||||||||||||||||||| Sbjct: 1728 cgccgcgcccgcgccggccgc 1748
>gb|AC026904.7| Homo sapiens chromosome 8, clone RP11-567J20, complete sequence Length = 175369 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 ggaggcagaggaggagaagccaccg 180 ||||| ||||||||||||||||||| Sbjct: 80369 ggaggaagaggaggagaagccaccg 80393
>gb|AC151608.2| Emiliania huxleyi clone JGIACCU-13E1, complete sequence Length = 30907 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 133 gccgccgcgcccgcgccggccgcgg 157 |||||||||||||||||| |||||| Sbjct: 22965 gccgccgcgcccgcgccgcccgcgg 22989
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 gccggttccgcggcgaccggc 337 ||||||||||||||||||||| Sbjct: 5320482 gccggttccgcggcgaccggc 5320502
>gb|M33704.1|STMCURA Streptomyces curacoi CurD gene, partial cds; CurC and CurA genes, complete cds; and CurB gene, partial cds Length = 2192 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ctggccgccgcggacgccgcc 69 ||||||||||||||||||||| Sbjct: 2058 ctggccgccgcggacgccgcc 2078
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 gccgccgcggacgccgccgcgtggt 76 ||||||||||||||||||| ||||| Sbjct: 19523079 gccgccgcggacgccgccgggtggt 19523103 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gccggcggccgcggcggtgg 240 |||||||||||||||||||| Sbjct: 25349352 gccggcggccgcggcggtgg 25349333 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 cgcgcccgcgccggccgcggaggc 161 |||||| ||||||||||||||||| Sbjct: 2550449 cgcgccggcgccggccgcggaggc 2550426
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 gcccgcgccggccgcggaggc 161 ||||||||||||||||||||| Sbjct: 1688710 gcccgcgccggccgcggaggc 1688730 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 aggtcgccgccgcgcccgcgccgg 151 ||||||||||||||| |||||||| Sbjct: 3991190 aggtcgccgccgcgctcgcgccgg 3991213
>dbj|AK119358.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-G03, full insert sequence Length = 2316 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 cggcggccgcggcggtggctgggcc 247 ||||||| ||||||||||||||||| Sbjct: 108 cggcggcggcggcggtggctgggcc 84
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ggccgccgcggacgccgccgc 71 ||||||||||||||||||||| Sbjct: 169774 ggccgccgcggacgccgccgc 169794
>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1066_B03 Length = 115339 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ggccgccgcggacgccgccgc 71 ||||||||||||||||||||| Sbjct: 78535 ggccgccgcggacgccgccgc 78555
>dbj|AK102320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090I04, full insert sequence Length = 2748 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 cggcggccgcggcggtggctgggcc 247 ||||||| ||||||||||||||||| Sbjct: 81 cggcggcggcggcggtggctgggcc 57
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 278 ggacgctgagccgcgagcagggcaa 302 ||||||||| ||||||||||||||| Sbjct: 409981 ggacgctgacccgcgagcagggcaa 409957
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 gccgccgcggacgccgccgcgtggt 76 ||||||||||||||||||| ||||| Sbjct: 19449292 gccgccgcggacgccgccgggtggt 19449316 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gccggcggccgcggcggtgg 240 |||||||||||||||||||| Sbjct: 25277528 gccggcggccgcggcggtgg 25277509 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 cgcgcccgcgccggccgcggaggc 161 |||||| ||||||||||||||||| Sbjct: 2550393 cgcgccggcgccggccgcggaggc 2550370
>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144596 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 gccgccgcggacgccgccgcgtggt 76 ||||||||||||||||||| ||||| Sbjct: 55260 gccgccgcggacgccgccgggtggt 55284
>emb|X15209.1|OCRYAN O.cuniculus mRNA for skeletal muscle ryanodine receptor Length = 15823 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccggccgcg 156 |||||||||||||||||| |||||| Sbjct: 13646 cgccgccgcgcccgcgcccgccgcg 13622
>emb|X15750.1|OCRRR Rabbit skeletal muscle mRNA for ryanodine receptor Length = 15361 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccggccgcg 156 |||||||||||||||||| |||||| Sbjct: 13184 cgccgccgcgcccgcgcccgccgcg 13160
>gb|AY651251.1| Ichthyobodo necator heat shock protein 90 gene, partial cds Length = 1927 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 gaggcagaggaggagaagcc 176 |||||||||||||||||||| Sbjct: 587 gaggcagaggaggagaagcc 606
>ref|XM_483617.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2527 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccgccgcggacgccgccgcg 72 |||||||||||||||||||| Sbjct: 909 ccgccgcggacgccgccgcg 890
>ref|XM_531343.1| PREDICTED: Pan troglodytes LOC466321 (LOC466321), mRNA Length = 987 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 249 cgccgccgcgcccgcgccgg 268
>ref|XM_467689.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1979 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gtcgccgccgcgcccgcgcc 149 |||||||||||||||||||| Sbjct: 274 gtcgccgccgcgcccgcgcc 255
>ref|XM_450270.1| Oryza sativa (japonica cultivar-group), mRNA Length = 591 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 cggccgcggaggcagaggaggaga 172 |||| ||||||||||||||||||| Sbjct: 481 cggcggcggaggcagaggaggaga 458
>ref|NM_197770.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0027P10.25), mRNA Length = 639 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ccgcgcccgcgccggccgcg 156 |||||||||||||||||||| Sbjct: 25 ccgcgcccgcgccggccgcg 6
>ref|NM_183875.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1869 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcggacgccgccgc 71 |||||||||||||||||||| Sbjct: 356 gccgccgcggacgccgccgc 337
>ref|NM_191272.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2370 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 ccgcgcccgcgccggccgcg 156 |||||||||||||||||||| Sbjct: 459 ccgcgcccgcgccggccgcg 478
>ref|NM_193639.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2070 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ccgccgcgcccgcgccggcc 153 |||||||||||||||||||| Sbjct: 76 ccgccgcgcccgcgccggcc 57
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcggacgccgccgc 71 |||||||||||||||||||| Sbjct: 1162947 gccgccgcggacgccgccgc 1162928
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 2199662 cgccgccgcgcccgcgccgg 2199643 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gccgccgcgcccgcgccggccgcg 156 |||||||||| ||||||||||||| Sbjct: 1821043 gccgccgcgctcgcgccggccgcg 1821066
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgccgccgcgcccgcgccg 150 |||||||||||||||||||| Sbjct: 1572067 tcgccgccgcgcccgcgccg 1572086
>ref|XM_871803.1| PREDICTED: Bos taurus similar to tetratricopeptide repeat domain 13, transcript variant 5 (LOC519575), mRNA Length = 3080 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tggccgccgcggacgccgcc 69 |||||||||||||||||||| Sbjct: 47 tggccgccgcggacgccgcc 66
>ref|XM_597799.2| PREDICTED: Bos taurus similar to tetratricopeptide repeat domain 13, transcript variant 1 (LOC519575), mRNA Length = 3242 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tggccgccgcggacgccgcc 69 |||||||||||||||||||| Sbjct: 47 tggccgccgcggacgccgcc 66
>ref|XM_871529.1| PREDICTED: Bos taurus similar to tetratricopeptide repeat domain 13, transcript variant 3 (LOC519575), mRNA Length = 931 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tggccgccgcggacgccgcc 69 |||||||||||||||||||| Sbjct: 69 tggccgccgcggacgccgcc 88
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 ccagcgacggcacactggccgccg 58 ||||||||||||| |||||||||| Sbjct: 2505432 ccagcgacggcactctggccgccg 2505409
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 3138397 cgccgccgcgcccgcgccgg 3138378 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgccgcgcccgcgccggccg 154 |||||||||||||||||||| Sbjct: 2799213 cgccgcgcccgcgccggccg 2799232
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 3373092 cgccgccgcgcccgcgccgg 3373073 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gccgccgcgcccgcgccggccgcg 156 |||||||||| ||||||||||||| Sbjct: 3065125 gccgccgcgctcgcgccggccgcg 3065148
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 ggggtcctggacgctgagcc 289 |||||||||||||||||||| Sbjct: 1663450 ggggtcctggacgctgagcc 1663469
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gccgcggacgccgccgcgtg 74 |||||||||||||||||||| Sbjct: 2388981 gccgcggacgccgccgcgtg 2389000
>gb|AC145725.2| Gasterosteus aculeatus clone CH213-173B10, complete sequence Length = 158904 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cagggcaacaagctgctggc 314 |||||||||||||||||||| Sbjct: 13994 cagggcaacaagctgctggc 14013
>ref|XM_539649.2| PREDICTED: Canis familiaris similar to KIAA0467 protein (LOC482532), mRNA Length = 6615 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgctgagccgcgagcagggc 300 |||||||||||||||||||| Sbjct: 4532 cgctgagccgcgagcagggc 4551
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 tcgccgccgcgcccgcgccg 150 |||||||||||||||||||| Sbjct: 166025 tcgccgccgcgcccgcgccg 166044
>gb|AF030876.2| Homo sapiens chromosome X clone Qc-8D3, RP4-671D9, I104-219D, L110-C1837 map q28, complete sequence Length = 112752 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 cagaggaggagaagccaccggcag 184 |||||||||||||||||| ||||| Sbjct: 7882 cagaggaggagaagccacaggcag 7859
>ref|NM_006237.2| Homo sapiens POU domain, class 4, transcription factor 1 (POU4F1), mRNA Length = 3824 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gccgccgcgcccgcgccggccgcg 156 |||||||||||||||||| ||||| Sbjct: 647 gccgccgcgcccgcgccgcccgcg 624
>gb|AC117756.8| Mus musculus chromosome 1, clone RP24-419N8, complete sequence Length = 174783 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 cggaggcagaggaggagaagccac 178 |||||| ||||||||||||||||| Sbjct: 32111 cggaggaagaggaggagaagccac 32088
>emb|AL445209.4| Human DNA sequence from clone RP11-52L5 on chromosome 13 Contains a transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene, a novel gene, the POU4F1 gene for POU domain, class 4, transcription factor 1 (BRN3A, RDC-1), the 3' end a novel gene (contains FLJ13449, possible ortholog of mouse 2810449K13Rik protein) and 3 CpG islands, complete sequence Length = 157302 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gccgccgcgcccgcgccggccgcg 156 |||||||||||||||||| ||||| Sbjct: 119484 gccgccgcgcccgcgccgcccgcg 119507
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 4269792 cgccgccgcgcccgcgccgg 4269811 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 1227616 cgccgccgcgcccgcgccgg 1227597
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gcgcgcacctggcgtcgggg 273 |||||||||||||||||||| Sbjct: 3015314 gcgcgcacctggcgtcgggg 3015333
>gb|U52112.2| Homo sapiens chromosome X clone QLL-D9139, Qc-7G12, Qc-7C1, Qc-12B2, Qc-12D5, QLL-A074, Qc-9D3 map q28, complete sequence Length = 181343 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 cagaggaggagaagccaccggcag 184 |||||||||||||||||| ||||| Sbjct: 169344 cagaggaggagaagccacaggcag 169321
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gccgcgcccgcgccggccgc 155 |||||||||||||||||||| Sbjct: 199278 gccgcgcccgcgccggccgc 199259
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gccgcgcccgcgccggccgc 155 |||||||||||||||||||| Sbjct: 135767 gccgcgcccgcgccggccgc 135748
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gccgcgcccgcgccggccgc 155 |||||||||||||||||||| Sbjct: 7449 gccgcgcccgcgccggccgc 7468
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gccgcgcccgcgccggccgc 155 |||||||||||||||||||| Sbjct: 320007 gccgcgcccgcgccggccgc 319988
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 1317197 cgccgccgcgcccgcgccgg 1317178 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgccgcgcccgcgccggccg 154 |||||||||||||||||||| Sbjct: 981447 cgccgcgcccgcgccggccg 981466
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 3114180 cgccgccgcgcccgcgccgg 3114161 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gccgccgcgcccgcgccggccgcg 156 |||||||||| ||||||||||||| Sbjct: 2795172 gccgccgcgctcgcgccggccgcg 2795195
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccgccgcggacgccgccgcg 72 |||||||||||||||||||| Sbjct: 131266 ccgccgcggacgccgccgcg 131247
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ccgccgcgcccgcgccggccgcgg 157 |||||||||||||||||| ||||| Sbjct: 172394 ccgccgcgcccgcgccgggcgcgg 172371
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgcgcccgcgccggccgcgg 157 |||||||||||||||||||| Sbjct: 74394 cgcgcccgcgccggccgcgg 74413
>gb|BC026312.1| Homo sapiens ataxin 2-binding protein 1, mRNA (cDNA clone IMAGE:4815500), containing frame-shift errors Length = 4039 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 1035 ggcggccgcggcggtggctg 1016
>gb|AF448859.1| Homo sapiens ataxin 2-binding protein variant 1 mRNA, complete cds Length = 2198 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 1703 ggcggccgcggcggtggctg 1684
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 40166 cgccgccgcgcccgcgccgg 40147
>gb|AC159035.2| Pan troglodytes BAC clone CH251-297P8 from chromosome unknown, complete sequence Length = 207834 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 cagaggaggagaagccaccggcag 184 |||||||||||||||||| ||||| Sbjct: 165107 cagaggaggagaagccacaggcag 165084
>ref|NM_018723.2| Homo sapiens ataxin 2-binding protein 1 (A2BP1), transcript variant 4, mRNA Length = 2279 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 1784 ggcggccgcggcggtggctg 1765
>ref|NM_145891.1| Homo sapiens ataxin 2-binding protein 1 (A2BP1), transcript variant 1, mRNA Length = 3262 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 1111 ggcggccgcggcggtggctg 1092
>ref|NM_145893.1| Homo sapiens ataxin 2-binding protein 1 (A2BP1), transcript variant 3, mRNA Length = 3315 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 1111 ggcggccgcggcggtggctg 1092
>ref|NM_145892.1| Homo sapiens ataxin 2-binding protein 1 (A2BP1), transcript variant 2, mRNA Length = 3184 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 1111 ggcggccgcggcggtggctg 1092
>dbj|AK001027.1| Homo sapiens cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR Length = 1513 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 1018 ggcggccgcggcggtggctg 999
>gb|AF109115.1|HSFOX09 Homo sapiens hexaribonucleotide binding protein 1 (HRNBP1) gene, exon 9 Length = 251 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 107 ggcggccgcggcggtggctg 88
>gb|AF109106.1| Homo sapiens hexaribonucleotide binding protein 1 isoform beta (HRNBP1) mRNA, complete cds Length = 3348 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 1111 ggcggccgcggcggtggctg 1092
>gb|AF094849.1| Homo sapiens hexaribonucleotide binding protein 1 isoform alpha (HRNBP1) mRNA, complete cds Length = 1547 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 1111 ggcggccgcggcggtggctg 1092
>gb|AC001228.1|HSAC001228 244Kb Contig from Human Chromosome 11p15.5 spanning D11S1 through D11S25, complete sequence Length = 244254 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 170582 cgccgccgcgcccgcgccgg 170601
>gb|AF229057.1| Homo sapiens hexaribonucleotide binding protein 1 isoform gamma (HRNBP1) mRNA, complete cds Length = 2000 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 1113 ggcggccgcggcggtggctg 1094
>ref|XM_498167.2| PREDICTED: Homo sapiens hypothetical protein DKFZp434J1015 (DKFZp434J1015), mRNA Length = 4839 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 141 gcccgcgccggccgcggaggcagaggaggaga 172 |||||||||||||||| ||| |||||||||| Sbjct: 3858 gcccgcgccggccgcgctggcggaggaggaga 3889
>gb|AC073343.6| Homo sapiens BAC clone RP11-611L7 from 7, complete sequence Length = 173967 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 141 gcccgcgccggccgcggaggcagaggaggaga 172 |||||||||||||||| ||| |||||||||| Sbjct: 38870 gcccgcgccggccgcgctggcggaggaggaga 38901
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 ccgcgcccgcgccggccgcg 156 |||||||||||||||||||| Sbjct: 57592 ccgcgcccgcgccggccgcg 57611
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cgccgcgcccgcgccggccg 154 |||||||||||||||||||| Sbjct: 1500940 cgccgcgcccgcgccggccg 1500921 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 1316950 cgccgccgcgcccgcgccgg 1316969
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 ccgcgcccgcgccggccgcg 156 |||||||||||||||||||| Sbjct: 21742909 ccgcgcccgcgccggccgcg 21742928
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 cggccgcggaggcagaggaggaga 172 |||| ||||||||||||||||||| Sbjct: 3683017 cggcggcggaggcagaggaggaga 3682994
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 cccgccggcggccgcggcggtggc 241 |||||||||||| ||||||||||| Sbjct: 1079235 cccgccggcggcagcggcggtggc 1079258
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gccgccgcgcccgcgccggccgcg 156 ||||||||||||||||| |||||| Sbjct: 23157372 gccgccgcgcccgcgcccgccgcg 23157349
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gtcgccgccgcgcccgcgcc 149 |||||||||||||||||||| Sbjct: 30857964 gtcgccgccgcgcccgcgcc 30857945
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ccgcgcccgcgccggccgcg 156 |||||||||||||||||||| Sbjct: 31657277 ccgcgcccgcgccggccgcg 31657258 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccgccgcgcccgcgccggcc 153 |||||||||||||||||||| Sbjct: 22337513 ccgccgcgcccgcgccggcc 22337532 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcggacgccgccgc 71 |||||||||||||||||||| Sbjct: 12853680 gccgccgcggacgccgccgc 12853661
>dbj|AB103463.1| Streptomyces sp. AM-7161 medermycin biosynthetic gene cluster (med-ORF1 - 30) and ORF P - Z , partial and complete cds Length = 36202 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccggccgc 155 ||||||||| |||||||||||||| Sbjct: 6404 cgccgccgctcccgcgccggccgc 6381
>dbj|AB060859.1| Macaca fascicularis brain cDNA clone:QtrA-11594, similar to human ataxin 2-binding protein 1(A2BP1) isoform 3, mRNA, NM_145893 Length = 1475 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 893 ggcggccgcggcggtggctg 874
>gb|AF017444.1|AF017444 Sinorhizobium meliloti NADP-dependent malic enzyme (tme) gene, complete cds Length = 3067 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 tcgccgccgcgcccgcgccg 150 |||||||||||||||||||| Sbjct: 957 tcgccgccgcgcccgcgccg 938
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ccgcgcccgcgccggccgcg 156 |||||||||||||||||||| Sbjct: 71009 ccgcgcccgcgccggccgcg 70990
>gb|AY187621.1| Oryza sativa (indica cultivar-group) invertase (INV) mRNA, complete cds Length = 1937 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcggacgccgccgc 71 |||||||||||||||||||| Sbjct: 380 gccgccgcggacgccgccgc 361
>gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, complete sequence Length = 176226 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cgccgccgcgcccgcgccgg 151 |||||||||||||||||||| Sbjct: 105101 cgccgccgcgcccgcgccgg 105082
>gb|AF107203.1|AF107203 Homo sapiens ataxin 2-binding protein (A2BP) mRNA, complete cds Length = 2279 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 1784 ggcggccgcggcggtggctg 1765
>dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1140D12 Length = 139301 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcggacgccgccgc 71 |||||||||||||||||||| Sbjct: 5121 gccgccgcggacgccgccgc 5102
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcggacgccgccgc 71 |||||||||||||||||||| Sbjct: 134079 gccgccgcggacgccgccgc 134060
>dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013G02 Length = 163419 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccgccgcgcccgcgccggcc 153 |||||||||||||||||||| Sbjct: 34783 ccgccgcgcccgcgccggcc 34802
>dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F12 Length = 137716 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccgccgcgcccgcgccggcc 153 |||||||||||||||||||| Sbjct: 119992 ccgccgcgcccgcgccggcc 120011
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gccgccgcgcccgcgccggccgcg 156 ||||||||||||||||| |||||| Sbjct: 108020 gccgccgcgcccgcgcccgccgcg 107997
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 cggccgcggaggcagaggaggaga 172 |||| ||||||||||||||||||| Sbjct: 91278 cggcggcggaggcagaggaggaga 91255
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gtcgccgccgcgcccgcgcc 149 |||||||||||||||||||| Sbjct: 41541 gtcgccgccgcgcccgcgcc 41522
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccgccgcggacgccgccgcg 72 |||||||||||||||||||| Sbjct: 124491 ccgccgcggacgccgccgcg 124510
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccgccgcggacgccgccgcg 72 |||||||||||||||||||| Sbjct: 2815 ccgccgcggacgccgccgcg 2834
>dbj|AK129078.1| Mus musculus mRNA for mKIAA0179 protein Length = 4479 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 aggcagaggaggagaagccaccgg 181 ||||||||||||||||||| |||| Sbjct: 2634 aggcagaggaggagaagcctccgg 2611
>emb|Y10142.1|RCNUOEF R.capsulatus nuoE gene, nuoF gene and orfA Length = 3303 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcggacgccgccgc 71 |||||||||||||||||||| Sbjct: 2825 gccgccgcggacgccgccgc 2806
>dbj|AK121240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097I24, full insert sequence Length = 2527 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccgccgcggacgccgccgcg 72 |||||||||||||||||||| Sbjct: 909 ccgccgcggacgccgccgcg 890
>emb|Y09884.1|RC09884 R.capsulatus nuoD gene (partial), nuoE, nuoF genes, nuoG gene (partial), urf4, urf5, urf6, urf7 genes Length = 5275 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcggacgccgccgc 71 |||||||||||||||||||| Sbjct: 2913 gccgccgcggacgccgccgc 2894
>dbj|AK120720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G12, full insert sequence Length = 2483 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcggacgccgccgc 71 |||||||||||||||||||| Sbjct: 563 gccgccgcggacgccgccgc 544
>gb|AC005774.1|AC005774 Homo sapiens chromosome 16, BAC clone 26O3 (LANL), complete sequence Length = 164538 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ggcggccgcggcggtggctg 243 |||||||||||||||||||| Sbjct: 118117 ggcggccgcggcggtggctg 118136
>emb|AJ336844.1|HSA336844 Homo sapiens genomic sequence surrounding NotI site, clone NR5-027R Length = 500 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gccgccgcggacgccgccgc 71 |||||||||||||||||||| Sbjct: 1 gccgccgcggacgccgccgc 20
>dbj|AK104978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-C03, full insert sequence Length = 1205 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 cccgccggcggccgcggcggtggc 241 |||||||||||| ||||||||||| Sbjct: 543 cccgccggcggcggcggcggtggc 520
>dbj|AK099698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074K14, full insert sequence Length = 1980 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gtcgccgccgcgcccgcgcc 149 |||||||||||||||||||| Sbjct: 275 gtcgccgccgcgcccgcgcc 256
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gccggcggccgcggcggtgg 240 |||||||||||||||||||| Sbjct: 402 gccggcggccgcggcggtgg 421
>gb|AC117766.6| Mus musculus chromosome 1, clone RP24-507L6, complete sequence Length = 190180 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 cggaggcagaggaggagaagccac 178 |||||| ||||||||||||||||| Sbjct: 5112 cggaggaagaggaggagaagccac 5135
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 cccgccggcggccgcggcggtggc 241 |||||||||||| ||||||||||| Sbjct: 76823 cccgccggcggcagcggcggtggc 76846
>gb|AY104358.1| Zea mays PCO066324 mRNA sequence Length = 763 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 gaggaggagaagccaccggcagcc 186 ||||||||||||||| |||||||| Sbjct: 338 gaggaggagaagccagcggcagcc 361
>gb|AF015884.1|AF015884 Chlamydomonas reinhardtii hydroxyproline-rich glycoprotein gas29p precursor (GAS29) mRNA, complete cds Length = 2297 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 tgggcgcgcacctggcgtcggggt 274 ||||||||||| |||||||||||| Sbjct: 690 tgggcgcgcacttggcgtcggggt 667
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gccgccgcgcccgcgccggccgcg 156 |||||||| ||||||||||||||| Sbjct: 1451870 gccgccgcacccgcgccggccgcg 1451893
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 cccgccggcggccgcggcgg 237 |||||||||||||||||||| Sbjct: 408326 cccgccggcggccgcggcgg 408307
>emb|CT033797.5| Mouse DNA sequence from clone RP23-451J17 on chromosome 17, complete sequence Length = 177126 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 aggcagaggaggagaagccaccgg 181 ||||||||||||||||||| |||| Sbjct: 117231 aggcagaggaggagaagcctccgg 117208
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 ccgcgcccgcgccggccgcg 156 |||||||||||||||||||| Sbjct: 21754572 ccgcgcccgcgccggccgcg 21754591
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 cgcgcccgcgccggccgcggaggc 161 |||||| ||||||||||||||||| Sbjct: 117560 cgcgccggcgccggccgcggaggc 117583
>gb|AF029365.1|AF029365 Rhodobacter capsulatus B10 nuo gene cluster, NADH-CoQ reductase subunits NUOA (nuoA), NUOB (nuoB), NUOC (nuoC), NUOD (nuoD), NUOE (nuoE), NUOF (nuoF), NUOG (nuoG), NUOH (nuoH), NUOI (nuoI), NUOJ (nuoJ), NUOK (nuoK), NUOL (nuoL), NUOM (nuoM), and NUON (nuoN) genes, and BIRA (birA) gene, complete cds Length = 19614 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gccgccgcggacgccgccgc 71 |||||||||||||||||||| Sbjct: 5890 gccgccgcggacgccgccgc 5871
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gccggcggccgcggcggtgg 240 |||||||||||||||||||| Sbjct: 16162 gccggcggccgcggcggtgg 16143
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 tctacgatgacctgtacctggacg 103 ||||||| |||||||||||||||| Sbjct: 1313221 tctacgacgacctgtacctggacg 1313244
>gb|L20433.1|HUMOCTF1A Human octamer binding transcription factor 1 (OTF1) mRNA, complete cds Length = 3824 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gccgccgcgcccgcgccggccgcg 156 |||||||||||||||||| ||||| Sbjct: 647 gccgccgcgcccgcgccgcccgcg 624
>gb|U10063.1|HSBRN3A02 Human POU daomain factor (Brn-3a) gene, exon 2, complete cds Length = 1149 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gccgccgcgcccgcgccggccgcg 156 |||||||||||||||||| ||||| Sbjct: 299 gccgccgcgcccgcgccgcccgcg 276
>dbj|AB081950.1| Oryza sativa (japonica cultivar-group) OsPNH1 mRNA for ZLL/PNH homologous protein, complete cds Length = 3548 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gccgccgcgcccgcgccggccgcg 156 ||||||||||||||||| |||||| Sbjct: 584 gccgccgcgcccgcgcccgccgcg 561 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,035,423 Number of Sequences: 3902068 Number of extensions: 3035423 Number of successful extensions: 93562 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84731 Number of HSP's gapped (non-prelim): 8831 length of query: 344 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 322 effective length of database: 17,147,199,772 effective search space: 5521398326584 effective search space used: 5521398326584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
